Rh6BG237900

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
44406450 .. 44409611
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG237900.1

Sequence Viewer

Length: 1353 bp
ATGACATTTTCCATCATTTCCATTTTTTTCTTATCAAAAGTTATTTTTGTAGTAAAAAGAAGAAAAGAAAAAAAGAACAGAAATAGTCCCGAGCTATGTTTCTGGCCGAGTAGTTTCCGGGCAAACGGAACTGAAAAATCCATGGCGGACTGGTCTCTACTCCCTAAAGAACTCCTGGAGGACATCGCCAAACGCCTCGGCAGCTCATTCTATCTCCTCCGTTTCCGATCCGTCTGCTCCTCATGGCGATCATCAATCCCTTCCCGACCTCGCCGCTTACCCGGCCGATTCCCCTTCCTCACAAACTACGGCATCTCCGACTCCGCCCTCGGTTTCCACCTCTCGAAACGCACCGTTTTCCTCATCGGACCGCCCGAAAGCCCGGATCGGTGGCTGGTCAAGATCGAAGAGGACGTGCCCGGCCGCATGCACTTGCTGAATCCCCTCTCGCGGTTACCGCTGAGTCCTCTGCCGGAGGCTTTCCCAAAGGTACTGGATTTATCGAGGTTTTGGATTTTCGATTTGGGGGAGGAGTATGTTCTTCATTGTGTGAATTTTAGGCCTTTGGTTAATGCTCTGGGCGGTGCTGCTAATTTGTACATGGAAAAGGTGGTGTTTATGTGTTTGGGGGATGAAAGCAGTGATTTTGTGTTGCTTACGATCCATGTGTCTGGGAGATTGGCAATGTTTAAGTCTGTGGACAAGAAGTGGACTATAATTCATGATATGCCGTCGCCTTATGATGATGTTATGTTGTTTAAGGGCCAGTTTTATGCTGTTGACGGCACAGGAAGGACTGTGGTGGTTGGCTTGGACTCGAAAAATCCGAGTCTGGCTGCCAATCCGGTGTATGGTGGTGACAAGAAGTTTTTGGTGGAGTCGAGGGGGGAGTTGTTGGTGGTGGATATGTACTTGAGCACGGATCAGGAGGTGGATTGGGACGAGGATGATGAAGTGACTCAAGTGCAATTGGATGGGTGCATTTACGAGAGGACGGTCAAGTTTAAGGTTTATAACATGGATGAAGCAGCGCAGAAGTTGGTGCAGATGAAAAGCTTGGGGGATAGGGTGTTGTTTTTGGGGGATGACTGCACATTTTCTGCCTCGGCTTCAGAGTTGTCCGGTTGTAAAGGCAATTGTATATATTTTACGGATAATTTCTTCTATACGAGTGGTGAAGAAGAAGGGACGTTCAAGGGTCGTGATATAGGTGTGTTTGACTTGGATAATGGTACTATTGCCCCCTTATCTGATTATCCAGAGTCCTCAAAGCTGTTTTGGCCACCCCCTGTGTGGCTTTCATCGACAACATCCCAGCAGGTGCAAACCGAGTTTGAAGGACTAGCTTTGTGA

Protein Analysis

450

Amino Acids

50.91

Weight (kDa)

5.31

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 127 - 407 3.2e-53 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1014
AarI CACCTGC 1 cut(s) 1309
Acc36I ACCTGC 1 cut(s) 1309
AccII CGCG 1 cut(s) 451
AciI CCGC 8 cut(s) 146, 274, 324, 371, 424, 451, 458, 582
AclWI GGATC 4 cut(s) 222, 393, 655, 930
AcoI YGGCCR 4 cut(s) 104, 283, 421, 1280
AcsI RAATTY 1 cut(s) 553
AcuI CTGAAG 1 cut(s) 1095
AfaI GTAC 4 cut(s) 492, 599, 911, 1234
AfiI CCNNNNNNNGG 3 cut(s) 450, 851, 1293
AgsI TTSAA 2 cut(s) 1195, 1337
AjiI CACGTC 1 cut(s) 415
AjnI CCWGG 1 cut(s) 174
AluBI AGCT 5 cut(s) 94, 204, 1056, 1273, 1346
AluI AGCT 5 cut(s) 94, 204, 1056, 1273, 1346
Alw21I GWGCWC 1 cut(s) 920
Alw26I GTCTC 1 cut(s) 159
AlwI GGATC 4 cut(s) 222, 393, 655, 930
Ama87I CYCGRG 1 cut(s) 89
AoxI GGCC 6 cut(s) 104, 283, 421, 560, 763, 1280
ApeKI GCWGC 4 cut(s) 201, 587, 836, 1028
ApoI RAATTY 1 cut(s) 553
AspLEI GCGC 1 cut(s) 1033
AspS9I GGNCC 2 cut(s) 368, 763
AsuC2I CCSGG 4 cut(s) 119, 282, 383, 420
AsuHPI GGTGA 2 cut(s) 869, 1187
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 420
BalI TGGCCA 1 cut(s) 1282
Bbv12I GWGCWC 1 cut(s) 920
BbvI GCAGC 4 cut(s) 213, 574, 823, 1040
BccI CCATC 2 cut(s) 20, 968
BceAI ACGGC 3 cut(s) 325, 715, 799
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BciT130I CCWGG 1 cut(s) 176
BcnI CCSGG 4 cut(s) 119, 282, 383, 420
BcoDI GTCTC 1 cut(s) 159
BfaI CTAG 1 cut(s) 1343
BfuAI ACCTGC 1 cut(s) 1309
BisI GCNGC 6 cut(s) 202, 274, 424, 588, 837, 1029
BlsI GCNGC 6 cut(s) 203, 275, 425, 589, 838, 1030
Bme1390I CCNGG 5 cut(s) 119, 176, 282, 383, 420
Bme18I GGWCC 1 cut(s) 368
BmeT110I CYCGRG 1 cut(s) 89
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 2 cut(s) 368, 763
BmrFI CCNGG 5 cut(s) 119, 176, 282, 383, 420
BmsI GCATC 1 cut(s) 321
BpmI CTGGAG 1 cut(s) 197
BpuEI CTTGAG 2 cut(s) 934, 945
BpuMI CCSGG 4 cut(s) 119, 282, 383, 420
BsaI GGTCTC 1 cut(s) 159
BsaJI CCNNGG 4 cut(s) 141, 196, 328, 1104
BsaWI WCCGGW 2 cut(s) 844, 1121
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 3 cut(s) 450, 851, 1293
Bse1I ACTGG 3 cut(s) 155, 498, 766
Bse3DI GCAATG 1 cut(s) 690
BseBI CCWGG 1 cut(s) 176
BseDI CCNNGG 4 cut(s) 141, 196, 328, 1104
BseGI GGATG 6 cut(s) 637, 952, 979, 1027, 1090, 1310
BseLI CCNNNNNNNGG 3 cut(s) 450, 851, 1293
BseMI GCAATG 1 cut(s) 690
BseMII CTCAG 1 cut(s) 452
BseNI ACTGG 3 cut(s) 155, 498, 766
BseRI GAGGAG 3 cut(s) 206, 229, 545
BseSI GKGCMC 1 cut(s) 420
BseX3I CGGCCG 2 cut(s) 283, 421
BseXI GCAGC 4 cut(s) 213, 574, 823, 1040
BseYI CCCAGC 1 cut(s) 1314
BsgI GTGCAG 2 cut(s) 1064, 1075
Bsh1236I CGCG 1 cut(s) 451
Bsh1285I CGRYCG 2 cut(s) 286, 424
BshFI GGCC 6 cut(s) 106, 285, 423, 562, 765, 1282
BsiEI CGRYCG 2 cut(s) 286, 424
BsiHKAI GWGCWC 1 cut(s) 920
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 7 cut(s) 118, 282, 383, 420, 473, 845, 1122
BslFI GGGAC 3 cut(s) 72, 953, 1201
BslI CCNNNNNNNGG 3 cut(s) 450, 851, 1293
BsmAI GTCTC 1 cut(s) 159
BsmFI GGGAC 3 cut(s) 72, 953, 1201
BsnI GGCC 6 cut(s) 106, 285, 423, 562, 765, 1282
Bso31I GGTCTC 1 cut(s) 159
BsoBI CYCGRG 1 cut(s) 89
Bsp1286I GDGCHC 2 cut(s) 420, 920
Bsp1407I TGTACA 1 cut(s) 597
Bsp143I GATC 6 cut(s) 227, 248, 385, 402, 660, 922
Bsp19I CCATGG 1 cut(s) 141
BspACI CCGC 8 cut(s) 146, 274, 324, 371, 424, 451, 458, 582
BspANI GGCC 6 cut(s) 106, 285, 423, 562, 765, 1282
BspCNI CTCAG 1 cut(s) 453
BspFNI CGCG 1 cut(s) 451
BspHI TCATGA 1 cut(s) 721
BspMI ACCTGC 1 cut(s) 1309
BspPI GGATC 4 cut(s) 222, 393, 655, 930
BspTNI GGTCTC 1 cut(s) 159
BsrDI GCAATG 1 cut(s) 690
BsrGI TGTACA 1 cut(s) 597
BsrI ACTGG 3 cut(s) 155, 498, 766
BssECI CCNNGG 4 cut(s) 141, 196, 328, 1104
BssMI GATC 6 cut(s) 227, 248, 385, 402, 660, 922
BssT1I CCWWGG 1 cut(s) 141
Bst2UI CCWGG 1 cut(s) 176
Bst4CI ACNGT 3 cut(s) 355, 799, 997
Bst6I CTCTTC 1 cut(s) 402
BstAUI TGTACA 1 cut(s) 597
BstC8I GCNNGC 1 cut(s) 428
BstDEI CTNAG 1 cut(s) 461
BstDSI CCRYGG 1 cut(s) 141
BstEII GGTNACC 1 cut(s) 453
BstF5I GGATG 6 cut(s) 637, 952, 979, 1027, 1090, 1310
BstFNI CGCG 1 cut(s) 451
BstHHI GCGC 1 cut(s) 1033
BstKTI GATC 6 cut(s) 230, 251, 388, 405, 663, 925
BstMAI GTCTC 1 cut(s) 159
BstMBI GATC 6 cut(s) 227, 248, 385, 402, 660, 922
BstMCI CGRYCG 2 cut(s) 286, 424
BstMWI GCNNNNNNNGC 4 cut(s) 201, 282, 457, 1279
BstNI CCWGG 1 cut(s) 176
BstNSI RCATGY 1 cut(s) 430
BstPI GGTNACC 1 cut(s) 453
BstSCI CCNGG 5 cut(s) 117, 174, 280, 381, 418
BstSLI GKGCMC 1 cut(s) 420
BstUI CGCG 1 cut(s) 451
BstV1I GCAGC 4 cut(s) 213, 574, 823, 1040
BstXI CCANNNNNNTGG 1 cut(s) 671
BstZI CGGCCG 2 cut(s) 283, 421
BsuRI GGCC 6 cut(s) 106, 285, 423, 562, 765, 1282
BtgI CCRYGG 1 cut(s) 141
BtgZI GCGATG 1 cut(s) 169
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 6 cut(s) 637, 952, 979, 1027, 1090, 1310
BtsI GCAGTG 1 cut(s) 646
BtsIMutI CAGTG 1 cut(s) 646
BveI ACCTGC 1 cut(s) 1309
Cac8I GCNNGC 1 cut(s) 428
CciI TCATGA 1 cut(s) 721
CfoI GCGC 1 cut(s) 1033
Cfr13I GGNCC 2 cut(s) 368, 763
CpoI CGGWCCG 1 cut(s) 368
Csp6I GTAC 4 cut(s) 491, 598, 910, 1233
CspI CGGWCCG 1 cut(s) 368
CviAII CATG 7 cut(s) 142, 243, 427, 601, 665, 722, 1018
CviQI GTAC 4 cut(s) 491, 598, 910, 1233
DdeI CTNAG 1 cut(s) 461
DpnI GATC 6 cut(s) 229, 250, 387, 404, 662, 924
DpnII GATC 6 cut(s) 227, 248, 385, 402, 660, 922
EaeI YGGCCR 4 cut(s) 104, 283, 421, 1280
EagI CGGCCG 2 cut(s) 283, 421
Eam1104I CTCTTC 1 cut(s) 402
EarI CTCTTC 1 cut(s) 402
EciI GGCGGA 2 cut(s) 161, 313
EclXI CGGCCG 2 cut(s) 283, 421
Eco130I CCWWGG 1 cut(s) 141
Eco147I AGGCCT 1 cut(s) 562
Eco31I GGTCTC 1 cut(s) 159
Eco47I GGWCC 1 cut(s) 368
Eco52I CGGCCG 2 cut(s) 283, 421
Eco57I CTGAAG 1 cut(s) 1095
Eco88I CYCGRG 1 cut(s) 89
Eco91I GGTNACC 1 cut(s) 453
EcoO65I GGTNACC 1 cut(s) 453
EcoRII CCWGG 1 cut(s) 174
EcoT14I CCWWGG 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 141
FaeI CATG 7 cut(s) 145, 246, 430, 604, 668, 725, 1021
FaqI GGGAC 3 cut(s) 72, 953, 1201
FatI CATG 7 cut(s) 141, 242, 426, 600, 664, 721, 1017
Fnu4HI GCNGC 6 cut(s) 202, 274, 424, 588, 837, 1029
FokI GGATG 6 cut(s) 644, 959, 986, 1034, 1097, 1297
Fsp4HI GCNGC 6 cut(s) 202, 274, 424, 588, 837, 1029
FspBI CTAG 1 cut(s) 1343
GlaI GCGC 1 cut(s) 1032
GluI GCNGC 6 cut(s) 202, 274, 424, 588, 837, 1029
GsaI CCCAGC 1 cut(s) 1318
GsuI CTGGAG 1 cut(s) 197
HaeIII GGCC 6 cut(s) 106, 285, 423, 562, 765, 1282
HapII CCGG 7 cut(s) 118, 282, 383, 420, 473, 845, 1122
HhaI GCGC 1 cut(s) 1033
Hin1II CATG 7 cut(s) 145, 246, 430, 604, 668, 725, 1021
Hin6I GCGC 1 cut(s) 1031
HinP1I GCGC 1 cut(s) 1031
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HindIII AAGCTT 1 cut(s) 1054
HinfI GANTC 9 cut(s) 288, 320, 439, 463, 815, 829, 878, 958, 1262
HpaII CCGG 7 cut(s) 118, 282, 383, 420, 473, 845, 1122
HphI GGTGA 2 cut(s) 869, 1187
Hpy166II GTNNAC 3 cut(s) 700, 711, 781
Hpy188I TCNGA 6 cut(s) 227, 319, 368, 828, 1114, 1252
Hpy188III TCNNGA 8 cut(s) 89, 264, 343, 400, 722, 926, 1202, 1259
Hpy8I GTNNAC 3 cut(s) 700, 711, 781
Hpy99I CGWCG 1 cut(s) 736
HpyAV CCTTC 5 cut(s) 270, 304, 786, 1178, 1331
HpyCH4III ACNGT 3 cut(s) 355, 799, 997
HpyCH4IV ACGT 2 cut(s) 414, 1190
HpyCH4V TGCA 6 cut(s) 430, 967, 981, 1045, 1092, 1324
HpyF10VI GCNNNNNNNGC 4 cut(s) 201, 282, 457, 1279
HpyF3I CTNAG 1 cut(s) 461
HpySE526I ACGT 2 cut(s) 414, 1190
Hsp92II CATG 7 cut(s) 145, 246, 430, 604, 668, 725, 1021
HspAI GCGC 1 cut(s) 1031
Kzo9I GATC 6 cut(s) 227, 248, 385, 402, 660, 922
LmnI GCTCC 1 cut(s) 242
Lsp1109I GCAGC 4 cut(s) 213, 574, 823, 1040
LweI GCATC 1 cut(s) 321
MaeI CTAG 1 cut(s) 1343
MaeII ACGT 2 cut(s) 414, 1190
MaeIII GTNAC 3 cut(s) 453, 857, 955
MalI GATC 6 cut(s) 229, 250, 387, 404, 662, 924
MboI GATC 6 cut(s) 227, 248, 385, 402, 660, 922
MboII GAAGA 6 cut(s) 72, 419, 533, 1153, 1190, 1193
MfeI CAATTG 2 cut(s) 968, 1135
MhlI GDGCHC 2 cut(s) 420, 920
MlsI TGGCCA 1 cut(s) 1282
MluCI AATT 6 cut(s) 553, 592, 717, 968, 1135, 1156
MluNI TGGCCA 1 cut(s) 1282
MlyI GAGTC 7 cut(s) 314, 472, 809, 838, 887, 952, 1271
MmeI TCCRAC 1 cut(s) 342
Mox20I TGGCCA 1 cut(s) 1282
MscI TGGCCA 1 cut(s) 1282
MseI TTAA 4 cut(s) 570, 690, 759, 1005
Msp20I TGGCCA 1 cut(s) 1282
MspA1I CMGCKG 1 cut(s) 460
MspI CCGG 7 cut(s) 118, 282, 383, 420, 473, 845, 1122
MspR9I CCNGG 5 cut(s) 119, 176, 282, 383, 420
MunI CAATTG 2 cut(s) 968, 1135
MvaI CCWGG 1 cut(s) 176
MvnI CGCG 1 cut(s) 451
MwoI GCNNNNNNNGC 4 cut(s) 201, 282, 457, 1279
NciI CCSGG 4 cut(s) 119, 282, 383, 420
NcoI CCATGG 1 cut(s) 141
NdeII GATC 6 cut(s) 227, 248, 385, 402, 660, 922
NlaIII CATG 7 cut(s) 145, 246, 430, 604, 668, 725, 1021
NmeAIII GCCGAG 3 cut(s) 132, 177, 1085
NmuCI GTSAC 2 cut(s) 857, 955
NspI RCATGY 1 cut(s) 430
PaeI GCATGC 1 cut(s) 430
PagI TCATGA 1 cut(s) 721
PaqCI CACCTGC 1 cut(s) 1309
PceI AGGCCT 1 cut(s) 562
PcsI WCGNNNNNNNCGW 4 cut(s) 315, 372, 411, 824
PfeI GAWTC 2 cut(s) 288, 439
PfoI TCCNGGA 1 cut(s) 174
PkrI GCNGC 6 cut(s) 203, 275, 425, 589, 838, 1030
PleI GAGTC 7 cut(s) 314, 471, 809, 837, 886, 952, 1270
PpsI GAGTC 7 cut(s) 314, 471, 809, 837, 886, 952, 1270
PsiI TTATAA 1 cut(s) 1014
Psp6I CCWGG 1 cut(s) 174
PspEI GGTNACC 1 cut(s) 453
PspFI CCCAGC 1 cut(s) 1314
PspGI CCWGG 1 cut(s) 174
PspPI GGNCC 2 cut(s) 368, 763
RsaI GTAC 4 cut(s) 492, 599, 911, 1234
RsaNI GTAC 4 cut(s) 491, 598, 910, 1233
Rsr2I CGGWCCG 1 cut(s) 368
RsrII CGGWCCG 1 cut(s) 368
SaqAI TTAA 4 cut(s) 570, 690, 759, 1005
SatI GCNGC 6 cut(s) 202, 274, 424, 588, 837, 1029
Sau3AI GATC 6 cut(s) 227, 248, 385, 402, 660, 922
Sau96I GGNCC 2 cut(s) 368, 763
SchI GAGTC 7 cut(s) 314, 472, 809, 838, 887, 952, 1271
ScrFI CCNGG 5 cut(s) 119, 176, 282, 383, 420
SduI GDGCHC 2 cut(s) 420, 920
SfaNI GCATC 1 cut(s) 321
SinI GGWCC 1 cut(s) 368
SmlI CTYRAG 2 cut(s) 913, 960
SmoI CTYRAG 2 cut(s) 913, 960
SphI GCATGC 1 cut(s) 430
Sse9I AATT 6 cut(s) 553, 592, 717, 968, 1135, 1156
SseBI AGGCCT 1 cut(s) 562
SsiI CCGC 8 cut(s) 146, 274, 324, 371, 424, 451, 458, 582
SspMI CTAG 1 cut(s) 1343
StuI AGGCCT 1 cut(s) 562
StyD4I CCNGG 5 cut(s) 117, 174, 280, 381, 418
StyI CCWWGG 1 cut(s) 141
TaaI ACNGT 3 cut(s) 355, 799, 997
TaiI ACGT 2 cut(s) 417, 1193
TaqI TCGA 7 cut(s) 344, 405, 503, 519, 818, 881, 1304
TasI AATT 6 cut(s) 553, 592, 717, 968, 1135, 1156
TatI WGTACW 2 cut(s) 597, 909
TauI GCSGC 2 cut(s) 276, 426
TfiI GAWTC 2 cut(s) 288, 439
Tru1I TTAA 4 cut(s) 570, 690, 759, 1005
Tru9I TTAA 4 cut(s) 570, 690, 759, 1005
TscAI CASTG 1 cut(s) 646
TseFI GTSAC 2 cut(s) 857, 955
TseI GCWGC 4 cut(s) 201, 587, 836, 1028
Tsp45I GTSAC 2 cut(s) 857, 955
TspDTI ATGAA 7 cut(s) 533, 648, 710, 966, 1038, 1064, 1290
TspGWI ACGGA 5 cut(s) 141, 209, 220, 935, 1166
TspRI CASTG 1 cut(s) 646
VpaK11BI GGWCC 1 cut(s) 368
XapI RAATTY 1 cut(s) 553
XceI RCATGY 1 cut(s) 430
XcmI CCANNNNNNNNNTGG 1 cut(s) 1290
XspI CTAG 1 cut(s) 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.