Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0015165

Physical Location & Seq

Genomic Coordinates Forward (+)

16971328 .. 16974888

Gene Structure 3561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g20170.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

ATGACAGTGAGCAGCACCACCGGCAAAGAACGCCTGGTGGTGGAGGTAGTGGCGGCACACAACCTCATGCCCAAAGACGGCGAAGGTTCGTCGTCCCCATTCGTCGAAATCGAGTTCGAAAACCAGAGGCTCCGAACCCAGGTGAAGTACAAGGACCTCAACCCGGTCTGGAACGAGAAGCTAGTCTTTCATGTCAAGGACGTGGCTGATCTTCCCTACAGAGCCATAGAGGTCAACATTTTCAACGAGAGGAGGTCCGGCAACAGCAGAAATTTTCTGGGAAAGGTCAGAGTTTCGGGGTCTAATATTGCTAAAGAAGGAGAGGAGATTCCTCAGCTTTATACACTCGACAAAAGAAGCCTCTTTTCTCATATCAGAGGCGAGATTAGCTTGAAGCTTTACCTTTCGACCAGAGAAGAGGTCAAGGAAACCAGGGCTAATGGAATACTGGGTTCCTCTGTTTCCAACTCTGCTTCGTCTTCTGGGTTTTCGAAGAAAAGCAAGAAACTTCAGGGCCAAAGCTCGGTTATGGCTTCACAGAACCAGCTGATACAAGAAGTAAAGCCGACGCAGCAAGGTCAGAGCAACAATAATCACTCAAAGACTGTGGAGAACAACCAAGGAGTGATGATGAAGCCGATTCTGATCAATACAGGCCCTGTTTCTGCAATTTCCGGCGGCGGCGGAGTGACCGGAGGAGGAGGAGGAGGCGGCGGAGGGGTTGTGTACGGAAATGGGATGACGGAGTTTTCGCTGAAGGAGACGAGGCCTCAGCTCGGCGGTGAGTCTTTGAAAAAGGATAAAACTAGCTCTACTTATGACCTTGTTGAGCAAATGCAGTATTTGTATGTGAAAGTTGTTAAAGCTAGAGACTTTTCTGTTTTCGGAGGAGGGGAGGTTGTGGCTGAAGTGAAGTTGGGAAATTACAGAGGGATAACAAAGAGGGTGAGTTTGAACAATGTGGAGTGGGGTCAGGTGTTTGCTTTTTCTAAAGATTGCATACAGTCTTCAATGGTGGAGGTTTTTGTGAAGGAGGGGAACAAAGATGACTTCTTGGGGAGGGTCTGGTTTGATTTGAATGAGGTTCCGAAGAGGGTTCCGCCGGATAGTCAGTTGGCGCCGCAGTGGTATAGAATGGAGGATAAGAAGGGAGACAAGTCGAAATCAGGGGAGGTGATGATCTCCATTTGGTTTGGGACTCAGGCTGATGAGGCATTTGCTGAAGCTTGGCATTCGAAGGCTGCAAATGTGAATTTTGATGGGCTTGGTTCGATTAAGTCCAAGGTTTACTTGACACCAAGGCTTTGGTACCTGAGGGTTAAAGTGATTGAAGCTCAAGACATTGTTCCTGGGGAGAAAGGGTCTGCAATGATGAGGTTTCCGGAGCTTTCTGTGAAAATTCAGGTGGGGAATCAGGTCTTGAGGACTAGAATTGCGCAGCCTAGCAGTGTGAGGAGCCTCTCAAATCCTTTATGGAATGAGGAGATGATGTTTGTGGTGGCTGAGCCTATTGAGGACTACTTACTGATCTGTGTTGAGGATAGGGTTGGGCCAGGGCGAGATGAGGTGGCTGGGAGAGTGGTTATTCCGGTGGCAGCAATGGAAAGGCGAACGGATGACAAGCCTGTTGTTTCGAGGTGGTTCAACCTTGATAACAGCAGCCATTTCACCAATGCAGCTGGAGAGTCCAAAGTGATGACAAGGTTTGGGTCTAGAATTCATTTGAGGGTTTCACTTGATGGAGGTTATCACGTACTTGATGAGGCCACAATGTATAGCAGTGATCTGAAGCCGACTGATAAGAGGCTTTGGAAGCCCCACATTGGTGTGCTTGAAATGGGTATTTTGGGAGCCACTGGGCTTATGCCAATGAAGATCAAAGAAGGGAAAGGAGGGTCTAGTGATGCTTATTGCGTTGCGAAGTATGGACAGAAATGGGTTCGAACTCGAACTGTGGTTGATAGCTTGTCGCCTAAGTGGAACGAGCAGTACACTTGGGAAGTGTTTGATCCTTGCACGGTTGTTACCATTGGGGTGTTTGATAATTCTCGGATTGATAAGAACACGGCCAACAATGCTGGAGTTCGTGATTCTCGGATTGGGAAGGTTAGGATTCGATTGTCCACACTCGAGTCTGATCGAGTCTACACTCACTCCTATCCTCTCTTGATGCTGCACCCTTCCGGTGTCAAGAAAATGGGTGAGCTTCATCTGGCGGTCAGGTTTTCTTGTGCCAATATGGGTAACATGTTGAACATGTACACTATGCCACTGCTTCCCAAGATGCATTTTGTGCAGCCTTTGACTGTGAATCAACTGGAGACTCTGAGGCACCAGGCTATGAATGTAGTGGCATCGAGGCTTAGCAGGACAGAGCCACCGTTGGGGAGAGAAGTGGTGGAGTACATGCTTGACCATGACTCACATATGTGGAGCATGAGAAGGAGCAAAGCCAACTTCTTCAGGCTAGTGAATGTTCTATCAGGGCCTGTTGCTTTTGGAAGATTTGTGGAGCTGATGCGGAGTTGGCAGAAACCAATCTGCTCTGCCTTGTTTGTTGCAACTTTCCTCTTACTGGTTGCATTTCCGGAGCTCATAGTCCCAATGATCTTGCTGCATATGGCATTTGTTGGAATGTGGCGGTTTAAGTCCCGTCCTCGTCACCCATGTTTCATGGACACTAATCTTTCCCATGCTGAGAGTGTCTATGGTGATGAGCTAGATGAGGAGTTTGATTCGTTCCCAACGAGTCGGAGTGCAGAGGTTGTAAGGATGAGGTATGACCGGCTTAGGAGTGTGGCTGGGAGGATTCAAACTGTTGTTGGTGATGTGGCTACACAAGGTGAGAGGTTCCAAGCATTGCTAAGCTGGAGAGACCCAAGGGCAACGTTCTTGTTTGTGATCTTCTGCTTGATTGCTGCTGTAGTGTTCTATGCTGTGCCGATTAGAATGGTTGTGGTTTTGGTGGGATTGTATGTGCTCAGGCCGCCAAGATTCAGGAGCAAGCTGCCTTCTCCACCTTTGAGCTTCTTCAGGAGGCTGCCAACCAGGGCTGATAGCTTGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1023

Amino Acids

114.65

Weight (kDa)

9.42

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	11 - 115	8.2e-22	C2 domain
C2	PF00168	281 - 378	2.3e-06	C2 domain
C2	PF00168	436 - 550	3.4e-14	C2 domain
C2	PF00168	609 - 722	4.4e-20	C2 domain
PRT_C	PF08372	867 - 1022	3.7e-73	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04150
fragaria_vesca	FvH4_2g20170
malus_domestica	MD05G1185200.v1.1
prunus_persica	Prupe.8G211500_v2.0.a1
pyrus_communis	pycom05g16990
rosa_chinensis	RchiOBHm_Chr6g0285931
rosa_laevigata	RLG00000012596
rosa_multiflora	Rmu_co8487333.1_g000001 Rmu_sc0004808.1_g000007
rosa_roxburghii	Rroxscaffold_7G00182590
rosa_rugosa	Rorug06G0177500
rosa_samantha	Rh6AG289600 Rh6BG291500 Rh6CG292400 Rh6DG284500
rosa_wichuraiana	Rw6G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1437
Acc65I	GGTACC	1 cut(s)	1308
AccB1I	GGYRCC	3 cut(s)	1117, 1308, 2331
AccI	GTMKAC	1 cut(s)	2145
AccIII	TCCGGA	2 cut(s)	1381, 2587
AclI	AACGTT	1 cut(s)	2888
AclWI	GGATC	1 cut(s)	2003
AcoI	YGGCCR	1 cut(s)	2067
AcsI	RAATTY	4 cut(s)	271, 1252, 1398, 1716
AcuI	CTGAAG	7 cut(s)	494, 776, 927, 1242, 1808, 2446, 3016
AcyI	GRCGYC	1 cut(s)	1118
AdeI	CACNNNGTG	1 cut(s)	2843
AfaI	GTAC	7 cut(s)	149, 728, 1310, 1755, 1991, 2261, 2405
AfiI	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 523, 776, 1823, 2384, 2575
AflIII	ACRYGT	2 cut(s)	2247, 2256
AjiI	CACGTC	1 cut(s)	202
AjnI	CCWGG	7 cut(s)	33, 138, 431, 1348, 1552, 2334, 3047
AleI	CACNNNNGTG	2 cut(s)	1824, 2428
Alw21I	GWGCWC	2 cut(s)	2595, 2982
Alw26I	GTCTC	5 cut(s)	755, 864, 1146, 2315, 2868
AlwI	GGATC	1 cut(s)	2003
AlwNI	CAGNNNCTG	2 cut(s)	659, 2489
Ama87I	CYCGRG	1 cut(s)	2129
Aor13HI	TCCGGA	2 cut(s)	1381, 2587
AoxI	GGCC	8 cut(s)	514, 655, 767, 1550, 1764, 2067, 2486, 2984
ApoI	RAATTY	4 cut(s)	271, 1252, 1398, 1716
ArsI	GACNNNNNNTTYG	2 cut(s)	733, 765
Asp718I	GGTACC	1 cut(s)	1308
AspLEI	GCGC	2 cut(s)	1120, 1438
AspS9I	GGNCC	6 cut(s)	154, 255, 514, 656, 1550, 2486
AsuC2I	CCSGG	1 cut(s)	164
AsuII	TTCGAA	4 cut(s)	117, 491, 1235, 1942
AvaI	CYCGRG	1 cut(s)	2129
AvaII	GGWCC	2 cut(s)	154, 255
AxyI	CCTNAGG	1 cut(s)	1313
BanI	GGYRCC	3 cut(s)	1117, 1308, 2331
BanII	GRGCYC	1 cut(s)	2595
BbsI	GAAGAC	2 cut(s)	471, 999
Bbv12I	GWGCWC	2 cut(s)	2595, 2982
BbvCI	CCTCAGC	2 cut(s)	333, 771
BccI	CCATC	2 cut(s)	1253, 1733
BceAI	ACGGC	2 cut(s)	94, 2082
BciT130I	CCWGG	7 cut(s)	35, 140, 433, 1350, 1554, 2336, 3049
BclI	TGATCA	1 cut(s)	645
BcnI	CCSGG	1 cut(s)	164
BcoDI	GTCTC	5 cut(s)	755, 864, 1146, 2315, 2868
BfaI	CTAG	9 cut(s)	182, 807, 867, 1428, 1443, 1713, 1899, 2468, 2720
BfmI	CTRYAG	2 cut(s)	217, 2922
BfoI	RGCGCY	1 cut(s)	1121
BlpI	GCTNAGC	3 cut(s)	1503, 2363, 2864
Bme1390I	CCNGG	8 cut(s)	35, 140, 164, 433, 1350, 1554, 2336, 3049
Bme18I	GGWCC	2 cut(s)	154, 255
BmeT110I	CYCGRG	1 cut(s)	2129
BmgBI	CACGTC	1 cut(s)	202
BmgT120I	GGNCC	6 cut(s)	154, 255, 514, 656, 1550, 2486
BmrFI	CCNGG	8 cut(s)	35, 140, 164, 433, 1350, 1554, 2336, 3049
BmrI	ACTGGG	2 cut(s)	458, 1866
BmsI	GCATC	5 cut(s)	1894, 2160, 2274, 2363, 2508
BmuI	ACTGGG	2 cut(s)	458, 1866
BpiI	GAAGAC	2 cut(s)	471, 999
BpmI	CTGGAG	4 cut(s)	1701, 2100, 2339, 2890
Bpu10I	CCTNAGC	4 cut(s)	333, 771, 2789, 2981
Bpu1102I	GCTNAGC	3 cut(s)	1503, 2363, 2864
Bpu14I	TTCGAA	4 cut(s)	117, 491, 1235, 1942
BpuEI	CTTGAG	2 cut(s)	1320, 1441
BpuMI	CCSGG	1 cut(s)	164
BsaAI	YACGTR	1 cut(s)	1753
BsaBI	GATNNNNATC	1 cut(s)	644
BsaHI	GRCGYC	1 cut(s)	1118
BsaI	GGTCTC	1 cut(s)	2868
BsaJI	CCNNGG	9 cut(s)	138, 432, 619, 1281, 1298, 1349, 1553, 2879, 3048
BsaWI	WCCGGW	5 cut(s)	692, 1381, 1588, 2183, 2587
Bsc4I	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 523, 776, 1823, 2384, 2575
Bse118I	RCCGGY	2 cut(s)	20, 2784
Bse1I	ACTGG	4 cut(s)	453, 1861, 2322, 2580
Bse21I	CCTNAGG	1 cut(s)	1313
Bse3DI	GCAATG	3 cut(s)	1374, 1605, 2858
Bse8I	GATNNNNATC	1 cut(s)	644
BseAI	TCCGGA	2 cut(s)	1381, 2587
BseBI	CCWGG	7 cut(s)	35, 140, 433, 1350, 1554, 2336, 3049
BseDI	CCNNGG	9 cut(s)	138, 432, 619, 1281, 1298, 1349, 1553, 2879, 3048
BseGI	GGATG	3 cut(s)	744, 1621, 2778
BseJI	GATNNNNATC	1 cut(s)	644
BseLI	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 523, 776, 1823, 2384, 2575
BseMI	GCAATG	3 cut(s)	1374, 1605, 2858
BseMII	CTCAG	8 cut(s)	347, 785, 1214, 1304, 1494, 2318, 2688, 2995
BseNI	ACTGG	4 cut(s)	453, 1861, 2322, 2580
BseYI	CCCAGC	2 cut(s)	1571, 2801
BsgI	GTGCAG	3 cut(s)	2159, 2315, 2778
BshFI	GGCC	8 cut(s)	516, 657, 769, 1552, 1766, 2069, 2488, 2986
BshNI	GGYRCC	3 cut(s)	1117, 1308, 2331
BsiHKAI	GWGCWC	2 cut(s)	2595, 2982
BsiHKCI	CYCGRG	1 cut(s)	2129
BslFI	GGGAC	4 cut(s)	79, 1210, 2585, 2635
BslI	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 523, 776, 1823, 2384, 2575
BsmAI	GTCTC	5 cut(s)	755, 864, 1146, 2315, 2868
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	4 cut(s)	79, 1210, 2585, 2635
BsmI	GAATGC	1 cut(s)	1231
BsnI	GGCC	8 cut(s)	516, 657, 769, 1552, 1766, 2069, 2488, 2986
Bso31I	GGTCTC	1 cut(s)	2868
BsoBI	CYCGRG	1 cut(s)	2129
Bsp119I	TTCGAA	4 cut(s)	117, 491, 1235, 1942
Bsp1286I	GDGCHC	2 cut(s)	2595, 2982
Bsp13I	TCCGGA	2 cut(s)	1381, 2587
Bsp1407I	TGTACA	1 cut(s)	2259
Bsp1720I	GCTNAGC	3 cut(s)	1503, 2363, 2864
BspANI	GGCC	8 cut(s)	516, 657, 769, 1552, 1766, 2069, 2488, 2986
BspCNI	CTCAG	8 cut(s)	346, 784, 1213, 1305, 1495, 2319, 2689, 2994
BspEI	TCCGGA	2 cut(s)	1381, 2587
BspPI	GGATC	1 cut(s)	2003
BspT104I	TTCGAA	4 cut(s)	117, 491, 1235, 1942
BspT107I	GGYRCC	3 cut(s)	1117, 1308, 2331
BspTNI	GGTCTC	1 cut(s)	2868
BsrDI	GCAATG	3 cut(s)	1374, 1605, 2858
BsrFI	RCCGGY	2 cut(s)	20, 2784
BsrGI	TGTACA	1 cut(s)	2259
BsrI	ACTGG	4 cut(s)	453, 1861, 2322, 2580
BssAI	RCCGGY	2 cut(s)	20, 2784
BssECI	CCNNGG	9 cut(s)	138, 432, 619, 1281, 1298, 1349, 1553, 2879, 3048
BssNI	GRCGYC	1 cut(s)	1118
BssT1I	CCWWGG	4 cut(s)	619, 1281, 1298, 2879
Bst2UI	CCWGG	7 cut(s)	35, 140, 433, 1350, 1554, 2336, 3049
Bst4CI	ACNGT	8 cut(s)	7, 607, 1005, 1954, 2020, 2308, 2382, 2818
Bst6I	CTCTTC	2 cut(s)	411, 1085
BstACI	GRCGYC	1 cut(s)	1118
BstAPI	GCANNNNNTGC	1 cut(s)	2293
BstAUI	TGTACA	1 cut(s)	2259
BstBAI	YACGTR	1 cut(s)	1753
BstBI	TTCGAA	4 cut(s)	117, 491, 1235, 1942
BstC8I	GCNNGC	1 cut(s)	3005
BstF5I	GGATG	3 cut(s)	744, 1621, 2778
BstH2I	RGCGCY	1 cut(s)	1121
BstHHI	GCGC	2 cut(s)	1120, 1438
BstMAI	GTCTC	5 cut(s)	755, 864, 1146, 2315, 2868
BstNI	CCWGG	7 cut(s)	35, 140, 433, 1350, 1554, 2336, 3049
BstNSI	RCATGY	3 cut(s)	2251, 2260, 2410
BstSCI	CCNGG	8 cut(s)	33, 138, 162, 431, 1348, 1552, 2334, 3047
BstSFI	CTRYAG	2 cut(s)	217, 2922
BstV2I	GAAGAC	2 cut(s)	471, 999
BstXI	CCANNNNNNTGG	1 cut(s)	1305
Bsu36I	CCTNAGG	1 cut(s)	1313
BsuRI	GGCC	8 cut(s)	516, 657, 769, 1552, 1766, 2069, 2488, 2986
BtrI	CACGTC	1 cut(s)	202
BtsCI	GGATG	3 cut(s)	744, 1621, 2778
BtsI	GCAGTG	4 cut(s)	1130, 1453, 1786, 2270
BtsIMutI	CAGTG	6 cut(s)	12, 1130, 1453, 1786, 1854, 2270
Cac8I	GCNNGC	1 cut(s)	3005
CaiI	CAGNNNCTG	2 cut(s)	659, 2489
CfoI	GCGC	2 cut(s)	1120, 1438
Cfr10I	RCCGGY	2 cut(s)	20, 2784
Cfr13I	GGNCC	6 cut(s)	154, 255, 514, 656, 1550, 2486
CseI	GACGC	1 cut(s)	577
Csp6I	GTAC	7 cut(s)	148, 727, 1309, 1754, 1990, 2260, 2404
CspCI	CAANNNNNGTGG	2 cut(s)	588, 623
CviQI	GTAC	7 cut(s)	148, 727, 1309, 1754, 1990, 2260, 2404
DinI	GGCGCC	1 cut(s)	1119
DraIII	CACNNNGTG	1 cut(s)	2843
EaeI	YGGCCR	1 cut(s)	2067
Eam1104I	CTCTTC	2 cut(s)	411, 1085
EarI	CTCTTC	2 cut(s)	411, 1085
EciI	GGCGGA	3 cut(s)	699, 729, 1089
Ecl136II	GAGCTC	1 cut(s)	2593
Eco130I	CCWWGG	4 cut(s)	619, 1281, 1298, 2879
Eco147I	AGGCCT	1 cut(s)	769
Eco24I	GRGCYC	1 cut(s)	2595
Eco31I	GGTCTC	1 cut(s)	2868
Eco47I	GGWCC	2 cut(s)	154, 255
Eco53kI	GAGCTC	1 cut(s)	2593
Eco57I	CTGAAG	7 cut(s)	494, 776, 927, 1242, 1808, 2446, 3016
Eco81I	CCTNAGG	1 cut(s)	1313
Eco88I	CYCGRG	1 cut(s)	2129
EcoICRI	GAGCTC	1 cut(s)	2593
EcoO109I	RGGNCCY	3 cut(s)	154, 656, 2486
EcoRI	GAATTC	1 cut(s)	1716
EcoRII	CCWGG	7 cut(s)	33, 138, 431, 1348, 1552, 2334, 3047
EcoT14I	CCWWGG	4 cut(s)	619, 1281, 1298, 2879
EcoT22I	ATGCAT	1 cut(s)	2289
EcoT38I	GRGCYC	1 cut(s)	2595
EgeI	GGCGCC	1 cut(s)	1119
EheI	GGCGCC	1 cut(s)	1119
ErhI	CCWWGG	4 cut(s)	619, 1281, 1298, 2879
Esp3I	CGTCTC	1 cut(s)	755
FalI	AAGNNNNNCTT	4 cut(s)	170, 202, 1274, 1306
FaqI	GGGAC	4 cut(s)	79, 1210, 2585, 2635
FauNDI	CATATG	2 cut(s)	2427, 2619
FbaI	TGATCA	1 cut(s)	645
FblI	GTMKAC	1 cut(s)	2145
FokI	GGATG	3 cut(s)	751, 1628, 2785
FriOI	GRGCYC	1 cut(s)	2595
FspBI	CTAG	9 cut(s)	182, 807, 867, 1428, 1443, 1713, 1899, 2468, 2720
FspI	TGCGCA	1 cut(s)	1437
GlaI	GCGC	2 cut(s)	1119, 1437
GsaI	CCCAGC	2 cut(s)	1575, 2805
GsuI	CTGGAG	4 cut(s)	1701, 2100, 2339, 2890
HaeII	RGCGCY	1 cut(s)	1121
HaeIII	GGCC	8 cut(s)	516, 657, 769, 1552, 1766, 2069, 2488, 2986
HgaI	GACGC	1 cut(s)	577
HhaI	GCGC	2 cut(s)	1120, 1438
Hin1I	GRCGYC	1 cut(s)	1118
Hin6I	GCGC	2 cut(s)	1118, 1436
HinP1I	GCGC	2 cut(s)	1118, 1436
HincII	GTYRAC	1 cut(s)	235
HindII	GTYRAC	1 cut(s)	235
HindIII	AAGCTT	2 cut(s)	395, 1224
Hpy166II	GTNNAC	7 cut(s)	235, 727, 1288, 1992, 2124, 2146, 2262
Hpy8I	GTNNAC	7 cut(s)	235, 727, 1288, 1992, 2124, 2146, 2262
Hpy99I	CGWCG	3 cut(s)	94, 107, 571
HpyCH4III	ACNGT	8 cut(s)	7, 607, 1005, 1954, 2020, 2308, 2382, 2818
HpyCH4IV	ACGT	3 cut(s)	201, 1752, 2888
HpySE526I	ACGT	3 cut(s)	201, 1752, 2888
Hsp92I	GRCGYC	1 cut(s)	1118
HspAI	GCGC	2 cut(s)	1118, 1436
KasI	GGCGCC	1 cut(s)	1117
Kpn2I	TCCGGA	2 cut(s)	1381, 2587
KpnI	GGTACC	1 cut(s)	1312
Ksp22I	TGATCA	1 cut(s)	645
LmnI	GCTCC	9 cut(s)	135, 1384, 1455, 1850, 2433, 2445, 2512, 2590, 3000
LweI	GCATC	5 cut(s)	1894, 2160, 2274, 2363, 2508
MaeI	CTAG	9 cut(s)	182, 807, 867, 1428, 1443, 1713, 1899, 2468, 2720
MaeII	ACGT	3 cut(s)	201, 1752, 2888
MaeIII	GTNAC	4 cut(s)	688, 2023, 2243, 2660
MhlI	GDGCHC	2 cut(s)	2595, 2982
MluCI	AATT	8 cut(s)	271, 669, 922, 1252, 1398, 1431, 1716, 2044
Mly113I	GGCGCC	1 cut(s)	1118
MlyI	GAGTC	8 cut(s)	794, 1192, 1694, 2141, 2151, 2317, 2414, 2758
MmeI	TCCRAC	3 cut(s)	489, 2611, 2732
Mph1103I	ATGCAT	1 cut(s)	2289
MroI	TCCGGA	2 cut(s)	1381, 2587
MseI	TTAA	4 cut(s)	861, 1275, 1320, 2646
MslI	CAYNNNNRTG	4 cut(s)	1824, 1826, 2033, 2428
MspA1I	CMGCKG	2 cut(s)	547, 1679
MspR9I	CCNGG	8 cut(s)	35, 140, 164, 433, 1350, 1554, 2336, 3049
Mva1269I	GAATGC	1 cut(s)	1231
MvaI	CCWGG	7 cut(s)	35, 140, 433, 1350, 1554, 2336, 3049
NarI	GGCGCC	1 cut(s)	1118
NciI	CCSGG	1 cut(s)	164
NdeI	CATATG	2 cut(s)	2427, 2619
NmeAIII	GCCGAG	1 cut(s)	756
NmuCI	GTSAC	2 cut(s)	688, 2660
NsbI	TGCGCA	1 cut(s)	1437
NsiI	ATGCAT	1 cut(s)	2289
NspI	RCATGY	3 cut(s)	2251, 2260, 2410
NspV	TTCGAA	4 cut(s)	117, 491, 1235, 1942
OliI	CACNNNNGTG	2 cut(s)	1824, 2428
PaeR7I	CTCGAG	1 cut(s)	2129
PceI	AGGCCT	1 cut(s)	769
PciI	ACATGT	2 cut(s)	2247, 2256
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 2744
PctI	GAATGC	1 cut(s)	1231
PfeI	GAWTC	9 cut(s)	328, 640, 1411, 2090, 2113, 2311, 2735, 2809, 2994
PleI	GAGTC	8 cut(s)	793, 1192, 1693, 2140, 2150, 2317, 2414, 2757
PluTI	GGCGCC	1 cut(s)	1121
PpsI	GAGTC	8 cut(s)	793, 1192, 1693, 2140, 2150, 2317, 2414, 2757
Ppu21I	YACGTR	1 cut(s)	1753
PpuMI	RGGWCCY	1 cut(s)	154
PscI	ACATGT	2 cut(s)	2247, 2256
Psp124BI	GAGCTC	1 cut(s)	2595
Psp1406I	AACGTT	1 cut(s)	2888
Psp5II	RGGWCCY	1 cut(s)	154
Psp6I	CCWGG	7 cut(s)	33, 138, 431, 1348, 1552, 2334, 3047
PspFI	CCCAGC	2 cut(s)	1571, 2801
PspGI	CCWGG	7 cut(s)	33, 138, 431, 1348, 1552, 2334, 3047
PspPI	GGNCC	6 cut(s)	154, 255, 514, 656, 1550, 2486
PspPPI	RGGWCCY	1 cut(s)	154
PspXI	VCTCGAGB	1 cut(s)	2129
PsrI	GAACNNNNNNTAC	2 cut(s)	1973, 2005
PstNI	CAGNNNCTG	2 cut(s)	659, 2489
PvuII	CAGCTG	2 cut(s)	547, 1679
RsaI	GTAC	7 cut(s)	149, 728, 1310, 1755, 1991, 2261, 2405
RsaNI	GTAC	7 cut(s)	148, 727, 1309, 1754, 1990, 2260, 2404
RseI	CAYNNNNRTG	4 cut(s)	1824, 1826, 2033, 2428
SacI	GAGCTC	1 cut(s)	2595
SaqAI	TTAA	4 cut(s)	861, 1275, 1320, 2646
Sau96I	GGNCC	6 cut(s)	154, 255, 514, 656, 1550, 2486
SchI	GAGTC	8 cut(s)	794, 1192, 1694, 2141, 2151, 2317, 2414, 2758
ScrFI	CCNGG	8 cut(s)	35, 140, 164, 433, 1350, 1554, 2336, 3049
SduI	GDGCHC	2 cut(s)	2595, 2982
SfaNI	GCATC	5 cut(s)	1894, 2160, 2274, 2363, 2508
SfcI	CTRYAG	2 cut(s)	217, 2922
SfoI	GGCGCC	1 cut(s)	1119
Sfr274I	CTCGAG	1 cut(s)	2129
SfuI	TTCGAA	4 cut(s)	117, 491, 1235, 1942
SinI	GGWCC	2 cut(s)	154, 255
SlaI	CTCGAG	1 cut(s)	2129
SmiMI	CAYNNNNRTG	4 cut(s)	1824, 1826, 2033, 2428
SmlI	CTYRAG	3 cut(s)	1335, 1420, 2129
SmoI	CTYRAG	3 cut(s)	1335, 1420, 2129
Sse9I	AATT	8 cut(s)	271, 669, 922, 1252, 1398, 1431, 1716, 2044
SseBI	AGGCCT	1 cut(s)	769
SspDI	GGCGCC	1 cut(s)	1117
SspI	AATATT	1 cut(s)	307
SspMI	CTAG	9 cut(s)	182, 807, 867, 1428, 1443, 1713, 1899, 2468, 2720
SstI	GAGCTC	1 cut(s)	2595
StuI	AGGCCT	1 cut(s)	769
StyD4I	CCNGG	8 cut(s)	33, 138, 162, 431, 1348, 1552, 2334, 3047
StyI	CCWWGG	4 cut(s)	619, 1281, 1298, 2879
TaaI	ACNGT	8 cut(s)	7, 607, 1005, 1954, 2020, 2308, 2382, 2818
TaiI	ACGT	3 cut(s)	204, 1755, 2891
TasI	AATT	8 cut(s)	271, 669, 922, 1252, 1398, 1431, 1716, 2044
TatI	WGTACW	4 cut(s)	147, 1989, 2259, 2403
TauI	GCSGC	6 cut(s)	56, 681, 684, 714, 1123, 2989
TfiI	GAWTC	9 cut(s)	328, 640, 1411, 2090, 2113, 2311, 2735, 2809, 2994
Tru1I	TTAA	4 cut(s)	861, 1275, 1320, 2646
Tru9I	TTAA	4 cut(s)	861, 1275, 1320, 2646
TscAI	CASTG	6 cut(s)	12, 1130, 1453, 1786, 1861, 2277
TseFI	GTSAC	2 cut(s)	688, 2660
Tsp45I	GTSAC	2 cut(s)	688, 2660
TspDTI	ATGAA	7 cut(s)	179, 647, 1709, 1886, 2198, 2357, 2662
TspGWI	ACGGA	3 cut(s)	744, 758, 1628
TspRI	CASTG	6 cut(s)	12, 1130, 1453, 1786, 1861, 2277
VpaK11BI	GGWCC	2 cut(s)	154, 255
XapI	RAATTY	4 cut(s)	271, 1252, 1398, 1716
XbaI	TCTAGA	1 cut(s)	1712
XceI	RCATGY	3 cut(s)	2251, 2260, 2410
XhoI	CTCGAG	1 cut(s)	2129
XmiI	GTMKAC	1 cut(s)	2145
XspI	CTAG	9 cut(s)	182, 807, 867, 1428, 1443, 1713, 1899, 2468, 2720
Zsp2I	ATGCAT	1 cut(s)	2289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.