Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0015165

Physical Location & Seq

Genomic Coordinates Reverse (-)

20350354 .. 20353368

Gene Structure 3015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012596

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGCCCAAAGACGGCGAAGGCTCGTCTTCCCCATTCGTCGAAATCGAATTTGAAAACCAGAGGCTCCGAACCCAGGTCAAGTACAAGGACCTGAACCCGGTCTGGAACGAGAAGCTAGTATTTTGTGTCAAGGACGTGGCTGATCTTCCCTACAGAGCCATAGAGGTCAACATTTTCAACGAGCGGAGGTCCGGCAACAGCAGAAATTTTCTGGGTAAAGTCAGAGTTTCAGGGTCCAATATTGCCAAAGAAGGTGAGGAGATCCCTCAGCTTTATACTCTTGACAAAAGAAGCCTCTTTTCTCATATCAGAGGCGAGATTAGCTTGAAGCTTTACCTTTCGACGAGAGAAGAGGTCAAGGAAGTTGGGGCTAATGGAATAGTGGGTTCCTCTGTTTCCAACTCTGCTTCTTCCTCTGGGTTTTCTAAGAAAAGCAAGAAACTTCAGGGTCAAAACTCGGTTATGGCGTCACAGAACCAGCTGATACAAGAAGCAAAGCCAACACAGCAGGGTCAGAGCAACAATAATCACTCAAAGCCTGTGGAGAACAACCAAGGAGTGATGATGAAGCCGATTCTGATCAATACAGGCCCTGTTTCTGCAATTTCGGGAGGCGGCGGCGGCGGCGGCGGAGCAACAGGCGGAGGAGGCGGTGGCGGAGGTGGTGTTTACGGAAATGGGTTGACCGAGTTTTCGCTGAAGGAGACGCGGCCTCAGCTCGGCGGTGAGTCTTTGAAAAAGGATAAAACTAGCTCTACTTATGACCTTGTTGAGCAAATGCAATATTTGTATGTGAAAGTGGTTAAAGCTAGAGACTTCTCTGTTTTTGGTGGAGGGGAGGTTGTGGCTGAAGTGAAGTTGGGAAATTACAGAGGGATAACAAAGAGGGTGAGTTTGAACAATGTGGAGTGGGGTCAGGTGTTTGCTTTTTCTAAAGATTGCATACAGTCTTCAGTGGTGGAGGTTTTTGTGAAGGAGGGGAACAAAGATGACTTCTTGGGAAGGGTGTGGTTTGATTTGAATGAGGTTCCGAGGAGGGTGCCGCCGGATAGTCAGTTGGCGCCGCAGTGGTATAGAATGGAGGATAAGAAGGGAGACAAGTCGAAATCTGGGGAGGTGATGATTTCGATTTGGTTTGGGACTCAGGCTGATGAGGCATTTGCTGAAGCTTGGCATTCCAAGGCTGCAAATGTGAATTTTGATGGGCTTGGTTCGATTAAGTCCAAGGTTTACTTGACACCAAGGCTTTGGTACCTGAGGGTTACAGTGATTGAAGCTCAAGACATTGTTCCTGGGGAGAAAGGGTCTGCAATGATGAGGTTTCCTGAGCTTTCGGCGAAAATCCAGGTGGGGAATCAGGTCTTGAGGACTAGGATTGCGCAGCCTAGCAGCGTGAGGAGCCTCTCGAATCCTTTGTGGAATGAGGAGATGATGTTTGTGGTAGCTGAGCCGATTGAGGACTACTTGCTGGTCTGTGTCGAGGATAGGGTTGGGCCGGGACGTGACGAGGTGGCAGGGAGAGTGGTTATTCCGGTGGCAGCAATTGAAAGGCGAACAGATGATAAGCCTGTCGTTTCGAGGTGGTTCAACCTTGACAACGGCAACCGTTTCACCAATGCAGCTGGGGAGTCCAAAGTGTTGACAAGGTTTGGGTCTAGAATTCATTTGAGGGTTTCACTTGATGGAGGTTATCACGTGCTTGATGAGGCTACAATGTATAGCAGTGATCTTAAGCCGACTGATAAGAGGCTTTGGAAGCCTCACATTGGTGTGCTTGAAATGGGTATTTTGGGAGCCACTGGGCTTATGCCGATGAAGATCAAAGAAGGGAAAGGAGGGGGTTCTAGTGATGCTTATTGTGTTGCAAAGTATGGACAGAAATGGGTTCGAACTCGAACTGTTGTTGATAGCTTGTCGCCTAAGTGGAACGAGCAGTACACGTGGGAGGTGTTTGATCCTTGCACTGTTGTTACCATTGGGGTGTTTGATAATTCTCGGATTGATAAGAACACGGCCAACAATGCTGGAGTCCGTGATTCCCGGATTGGGAAGGTTAGGATTCGATTGTCCACACTCGAGTCTGACCGAGTCTACACTCACTCATATCCGCTCTTGATGCTGCACCCTTCTGGTGTCAAGAAAATGGGTGAGCTTCATTTGGCGGTCAGGTTTTCTTGTGCCAATATGGGTAACATGTTGAACATCTACACTATGCCACTGCTTCCCAAGATGCATTTTGTGCAGCCTTTGACTGTGAATCAACTGGAAACTCTGAGATACCAGGCTATGAATGTGGTGGCGTCGAGGCTTAGCAGGACAGAGCCACCGTTGGGGAGAGAGGTGGTGGAGTACATGCTTGACCATGACTCGCATATGTGGAGCATGAGAAGGAGCAAAGCCAACTTCTTCAGGCTAGTGAATGTTCTATCAGGGCCTGTTGCTTTTGGAAGATTTGTGGAGTTGATGCGCAGTTGGCAGAAGCCAATCTGCTCTGCCTTGTTCGTTGCAACTTTCCTTTTGCTAGTTGCATTTCCGGAGCTCATAGTCCCAATGATCTTGCTGCATATGGCATTTGTGGGAATGTGGCGGTTTAAGTCCCGCCCTCGCCACCCATGTTTCATGGACACTAATCTATCCCATGCTGAGAGTGTTTATGCTGATGAGTTGGATGAGGAGTTTGATTCGTTCCCAACGAGTCGGAGTGCAGAAATTGTTAGGATGAGGTATGACCGGCTTAGGAGTGTGGCTGGGAGGATTCAAACTGTTGTTGGTGATGTGGCTACACAAGGTGAGAGGTTCCAAGCATTGCTAAGCTGGAGAGACCCAAGGGCAACATTCTTGTTTGTGATATTCTGCTTGATTGCTGCTGTTGTGTTCTATGCTGTGCCAATTAGAGTGGTGGTGGTTTTGGTGGGATTGTATGCACTCAGGCCGCCGAGATTCAGGAGCAAGCTGCCTTCTCAGCCTTTGAGCTTCTTCAGGAGGTTGCCAACTAGGGCTGATAGCTTGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1005

Amino Acids

112.23

Weight (kDa)

9.39

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	2 - 93	7.4e-16	C2 domain
C2	PF00168	262 - 359	2.3e-06	C2 domain
C2	PF00168	417 - 531	1.9e-13	C2 domain
C2	PF00168	590 - 704	6e-20	C2 domain
PRT_C	PF08372	849 - 1004	1.5e-73	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04150
fragaria_vesca	FvH4_2g20170
malus_domestica	MD05G1185200.v1.1
prunus_persica	Prupe.8G211500_v2.0.a1
pyrus_communis	pycom05g16990
rosa_chinensis	RchiOBHm_Chr6g0285931
rosa_laevigata	RLG00000012596
rosa_multiflora	Rmu_co8487333.1_g000001 Rmu_sc0004808.1_g000007
rosa_roxburghii	Rroxscaffold_7G00182590
rosa_rugosa	Rorug06G0177500
rosa_samantha	Rh6AG289600 Rh6BG291500 Rh6CG292400 Rh6DG284500
rosa_wichuraiana	Rw6G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1380, 2468
Acc65I	GGTACC	1 cut(s)	1251
AccB1I	GGYRCC	3 cut(s)	1039, 1060, 1251
AccBSI	CCGCTC	2 cut(s)	184, 2110
AccI	GTMKAC	1 cut(s)	2091
AccII	CGCG	1 cut(s)	709
AccIII	TCCGGA	1 cut(s)	2533
AclWI	GGATC	2 cut(s)	256, 1949
AcoI	YGGCCR	1 cut(s)	2013
AcsI	RAATTY	4 cut(s)	47, 205, 1195, 1659
AcuI	CTGAAG	7 cut(s)	428, 719, 870, 936, 1185, 2392, 2962
AcvI	CACGTG	2 cut(s)	1696, 1941
AcyI	GRCGYC	3 cut(s)	467, 1061, 2300
AdeI	CACNNNGTG	1 cut(s)	2789
AfaI	GTAC	4 cut(s)	83, 1253, 1937, 2351
AfiI	CCNNNNNNNGG	7 cut(s)	11, 73, 97, 719, 1766, 2046, 2330
AflII	CTTAAG	1 cut(s)	1730
AflIII	ACRYGT	2 cut(s)	1938, 2193
AjiI	CACGTC	2 cut(s)	136, 1502
AjnI	CCWGG	4 cut(s)	72, 1291, 1344, 2280
AleI	CACNNNNGTG	1 cut(s)	1767
Alw21I	GWGCWC	1 cut(s)	2541
Alw26I	GTCTC	4 cut(s)	698, 807, 1089, 2814
AlwI	GGATC	2 cut(s)	256, 1949
AlwNI	CAGNNNCTG	2 cut(s)	593, 2435
Ama87I	CYCGRG	1 cut(s)	2075
Aor13HI	TCCGGA	1 cut(s)	2533
AoxI	GGCC	6 cut(s)	589, 710, 1493, 2013, 2432, 2930
ApoI	RAATTY	4 cut(s)	47, 205, 1195, 1659
ArsI	GACNNNNNNTTYG	2 cut(s)	676, 708
Asp718I	GGTACC	1 cut(s)	1251
AspLEI	GCGC	3 cut(s)	1063, 1381, 2469
AspS9I	GGNCC	6 cut(s)	88, 189, 234, 590, 1493, 2432
AsuC2I	CCSGG	3 cut(s)	98, 1497, 2041
AsuHPI	GGTGA	8 cut(s)	266, 737, 901, 1129, 1603, 2159, 2783, 2801
AsuII	TTCGAA	1 cut(s)	1888
AvaI	CYCGRG	1 cut(s)	2075
AvaII	GGWCC	3 cut(s)	88, 189, 234
AxyI	CCTNAGG	1 cut(s)	1256
BanI	GGYRCC	3 cut(s)	1039, 1060, 1251
BanII	GRGCYC	1 cut(s)	2541
BbrPI	CACGTG	2 cut(s)	1696, 1941
BbsI	GAAGAC	2 cut(s)	18, 942
Bbv12I	GWGCWC	1 cut(s)	2541
BbvCI	CCTCAGC	2 cut(s)	267, 714
BccI	CCATC	2 cut(s)	1196, 1676
BceAI	ACGGC	3 cut(s)	28, 1615, 2028
BcgI	CGANNNNNNTGC	2 cut(s)	1021, 1055
BciT130I	CCWGG	4 cut(s)	74, 1293, 1346, 2282
BclI	TGATCA	1 cut(s)	579
BcnI	CCSGG	3 cut(s)	98, 1497, 2041
BcoDI	GTCTC	4 cut(s)	698, 807, 1089, 2814
BfmI	CTRYAG	1 cut(s)	151
BfoI	RGCGCY	1 cut(s)	1064
BfrI	CTTAAG	1 cut(s)	1730
BlpI	GCTNAGC	3 cut(s)	1446, 2309, 2810
Bme1390I	CCNGG	7 cut(s)	74, 98, 1293, 1346, 1497, 2041, 2282
Bme18I	GGWCC	3 cut(s)	88, 189, 234
BmeT110I	CYCGRG	1 cut(s)	2075
BmgBI	CACGTC	2 cut(s)	136, 1502
BmgT120I	GGNCC	6 cut(s)	88, 189, 234, 590, 1493, 2432
BmrFI	CCNGG	7 cut(s)	74, 98, 1293, 1346, 1497, 2041, 2282
BmrI	ACTGGG	1 cut(s)	1809
BmsI	GCATC	4 cut(s)	1840, 2106, 2220, 2454
BmuI	ACTGGG	1 cut(s)	1809
BpiI	GAAGAC	2 cut(s)	18, 942
BpmI	CTGGAG	2 cut(s)	2046, 2836
Bpu10I	CCTNAGC	4 cut(s)	267, 714, 1326, 2735
Bpu1102I	GCTNAGC	3 cut(s)	1446, 2309, 2810
Bpu14I	TTCGAA	1 cut(s)	1888
BpuEI	CTTGAG	2 cut(s)	1263, 1384
BpuMI	CCSGG	3 cut(s)	98, 1497, 2041
BsaAI	YACGTR	2 cut(s)	1696, 1941
BsaBI	GATNNNNATC	2 cut(s)	578, 1817
BsaHI	GRCGYC	3 cut(s)	467, 1061, 2300
BsaI	GGTCTC	1 cut(s)	2814
BsaJI	CCNNGG	8 cut(s)	72, 553, 1031, 1179, 1224, 1241, 1292, 2825
BsaWI	WCCGGW	2 cut(s)	1531, 2533
BsaXI	ACNNNNNCTCC	8 cut(s)	651, 681, 825, 855, 1289, 1319, 1418, 1448
Bsc4I	CCNNNNNNNGG	7 cut(s)	11, 73, 97, 719, 1766, 2046, 2330
Bse118I	RCCGGY	1 cut(s)	2730
Bse1I	ACTGG	2 cut(s)	1804, 2268
Bse21I	CCTNAGG	1 cut(s)	1256
Bse3DI	GCAATG	2 cut(s)	1317, 2804
Bse8I	GATNNNNATC	2 cut(s)	578, 1817
BseAI	TCCGGA	1 cut(s)	2533
BseBI	CCWGG	4 cut(s)	74, 1293, 1346, 2282
BseDI	CCNNGG	8 cut(s)	72, 553, 1031, 1179, 1224, 1241, 1292, 2825
BseGI	GGATG	2 cut(s)	2674, 2724
BseJI	GATNNNNATC	2 cut(s)	578, 1817
BseLI	CCNNNNNNNGG	7 cut(s)	11, 73, 97, 719, 1766, 2046, 2330
BseMI	GCAATG	2 cut(s)	1317, 2804
BseNI	ACTGG	2 cut(s)	1804, 2268
BseRI	GAGGAG	6 cut(s)	272, 660, 1048, 1411, 1439, 2687
BseYI	CCCAGC	2 cut(s)	1622, 2747
BsgI	GTGCAG	3 cut(s)	2105, 2261, 2724
Bsh1236I	CGCG	1 cut(s)	709
BshFI	GGCC	6 cut(s)	591, 712, 1495, 2015, 2434, 2932
BshNI	GGYRCC	3 cut(s)	1039, 1060, 1251
BsiHKAI	GWGCWC	1 cut(s)	2541
BsiHKCI	CYCGRG	1 cut(s)	2075
BsiSI	CCGG	8 cut(s)	98, 192, 1046, 1496, 1532, 2041, 2534, 2731
BslFI	GGGAC	4 cut(s)	1153, 1512, 2531, 2581
BslI	CCNNNNNNNGG	7 cut(s)	11, 73, 97, 719, 1766, 2046, 2330
BsmAI	GTCTC	4 cut(s)	698, 807, 1089, 2814
BsmBI	CGTCTC	1 cut(s)	698
BsmFI	GGGAC	4 cut(s)	1153, 1512, 2531, 2581
BsmI	GAATGC	1 cut(s)	1174
BsnI	GGCC	6 cut(s)	591, 712, 1495, 2015, 2434, 2932
Bso31I	GGTCTC	1 cut(s)	2814
BsoBI	CYCGRG	1 cut(s)	2075
Bsp119I	TTCGAA	1 cut(s)	1888
Bsp1286I	GDGCHC	1 cut(s)	2541
Bsp13I	TCCGGA	1 cut(s)	2533
Bsp143I	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
Bsp1720I	GCTNAGC	3 cut(s)	1446, 2309, 2810
BspANI	GGCC	6 cut(s)	591, 712, 1495, 2015, 2434, 2932
BspEI	TCCGGA	1 cut(s)	2533
BspFNI	CGCG	1 cut(s)	709
BspPI	GGATC	2 cut(s)	256, 1949
BspT104I	TTCGAA	1 cut(s)	1888
BspT107I	GGYRCC	3 cut(s)	1039, 1060, 1251
BspTI	CTTAAG	1 cut(s)	1730
BspTNI	GGTCTC	1 cut(s)	2814
BsrBI	CCGCTC	2 cut(s)	184, 2110
BsrDI	GCAATG	2 cut(s)	1317, 2804
BsrFI	RCCGGY	1 cut(s)	2730
BsrI	ACTGG	2 cut(s)	1804, 2268
BssAI	RCCGGY	1 cut(s)	2730
BssECI	CCNNGG	8 cut(s)	72, 553, 1031, 1179, 1224, 1241, 1292, 2825
BssMI	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
BssNI	GRCGYC	3 cut(s)	467, 1061, 2300
BssT1I	CCWWGG	5 cut(s)	553, 1179, 1224, 1241, 2825
Bst2UI	CCWGG	4 cut(s)	74, 1293, 1346, 2282
Bst4CI	ACNGT	8 cut(s)	948, 1267, 1607, 1900, 1966, 2254, 2328, 2764
Bst6I	CTCTTC	1 cut(s)	345
BstACI	GRCGYC	3 cut(s)	467, 1061, 2300
BstAFI	CTTAAG	1 cut(s)	1730
BstAPI	GCANNNNNTGC	1 cut(s)	2239
BstBAI	YACGTR	2 cut(s)	1696, 1941
BstBI	TTCGAA	1 cut(s)	1888
BstC8I	GCNNGC	1 cut(s)	2951
BstF5I	GGATG	2 cut(s)	2674, 2724
BstFNI	CGCG	1 cut(s)	709
BstH2I	RGCGCY	1 cut(s)	1064
BstHHI	GCGC	3 cut(s)	1063, 1381, 2469
BstKTI	GATC	7 cut(s)	145, 264, 582, 1729, 1821, 1957, 2556
BstMAI	GTCTC	4 cut(s)	698, 807, 1089, 2814
BstMBI	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
BstNI	CCWGG	4 cut(s)	74, 1293, 1346, 2282
BstNSI	RCATGY	2 cut(s)	2197, 2356
BstSCI	CCNGG	7 cut(s)	72, 96, 1291, 1344, 1495, 2039, 2280
BstSFI	CTRYAG	1 cut(s)	151
BstUI	CGCG	1 cut(s)	709
BstV2I	GAAGAC	2 cut(s)	18, 942
BstX2I	RGATCY	1 cut(s)	261
BstXI	CCANNNNNNTGG	1 cut(s)	1248
BstYI	RGATCY	1 cut(s)	261
Bsu36I	CCTNAGG	1 cut(s)	1256
BsuRI	GGCC	6 cut(s)	591, 712, 1495, 2015, 2434, 2932
BtrI	CACGTC	2 cut(s)	136, 1502
BtsCI	GGATG	2 cut(s)	2674, 2724
BtsI	GCAGTG	3 cut(s)	1073, 1729, 2216
BtsIMutI	CAGTG	7 cut(s)	960, 1073, 1272, 1729, 1797, 1962, 2216
Cac8I	GCNNGC	1 cut(s)	2951
CaiI	CAGNNNCTG	2 cut(s)	593, 2435
CfoI	GCGC	3 cut(s)	1063, 1381, 2469
Cfr10I	RCCGGY	1 cut(s)	2730
Cfr13I	GGNCC	6 cut(s)	88, 189, 234, 590, 1493, 2432
CseI	GACGC	3 cut(s)	456, 715, 2289
Csp6I	GTAC	4 cut(s)	82, 1252, 1936, 2350
CspCI	CAANNNNNGTGG	4 cut(s)	522, 557, 2877, 2912
CviAII	CATG	7 cut(s)	2194, 2353, 2363, 2383, 2613, 2620, 2639
CviQI	GTAC	4 cut(s)	82, 1252, 1936, 2350
DinI	GGCGCC	1 cut(s)	1062
DpnI	GATC	7 cut(s)	144, 263, 581, 1728, 1820, 1956, 2555
DpnII	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
DraIII	CACNNNGTG	1 cut(s)	2789
EaeI	YGGCCR	1 cut(s)	2013
Eam1104I	CTCTTC	1 cut(s)	345
EarI	CTCTTC	1 cut(s)	345
EciI	GGCGGA	3 cut(s)	645, 657, 672
Ecl136II	GAGCTC	1 cut(s)	2539
Eco130I	CCWWGG	5 cut(s)	553, 1179, 1224, 1241, 2825
Eco24I	GRGCYC	1 cut(s)	2541
Eco31I	GGTCTC	1 cut(s)	2814
Eco47I	GGWCC	3 cut(s)	88, 189, 234
Eco53kI	GAGCTC	1 cut(s)	2539
Eco57I	CTGAAG	7 cut(s)	428, 719, 870, 936, 1185, 2392, 2962
Eco72I	CACGTG	2 cut(s)	1696, 1941
Eco81I	CCTNAGG	1 cut(s)	1256
Eco88I	CYCGRG	1 cut(s)	2075
EcoICRI	GAGCTC	1 cut(s)	2539
EcoO109I	RGGNCCY	3 cut(s)	88, 590, 2432
EcoRI	GAATTC	1 cut(s)	1659
EcoRII	CCWGG	4 cut(s)	72, 1291, 1344, 2280
EcoT14I	CCWWGG	5 cut(s)	553, 1179, 1224, 1241, 2825
EcoT22I	ATGCAT	1 cut(s)	2235
EcoT38I	GRGCYC	1 cut(s)	2541
EgeI	GGCGCC	1 cut(s)	1062
EheI	GGCGCC	1 cut(s)	1062
ErhI	CCWWGG	5 cut(s)	553, 1179, 1224, 1241, 2825
Esp3I	CGTCTC	1 cut(s)	698
FaeI	CATG	7 cut(s)	2197, 2356, 2366, 2386, 2616, 2623, 2642
FalI	AAGNNNNNCTT	2 cut(s)	1217, 1249
FaqI	GGGAC	4 cut(s)	1153, 1512, 2531, 2581
FatI	CATG	7 cut(s)	2193, 2352, 2362, 2382, 2612, 2619, 2638
FauI	CCCGC	1 cut(s)	2606
FauNDI	CATATG	2 cut(s)	2373, 2565
FbaI	TGATCA	1 cut(s)	579
FblI	GTMKAC	1 cut(s)	2091
FokI	GGATG	2 cut(s)	2681, 2731
FriOI	GRGCYC	1 cut(s)	2541
FspI	TGCGCA	2 cut(s)	1380, 2468
GlaI	GCGC	3 cut(s)	1062, 1380, 2468
GsaI	CCCAGC	2 cut(s)	1626, 2751
GsuI	CTGGAG	2 cut(s)	2046, 2836
HaeII	RGCGCY	1 cut(s)	1064
HaeIII	GGCC	6 cut(s)	591, 712, 1495, 2015, 2434, 2932
HapII	CCGG	8 cut(s)	98, 192, 1046, 1496, 1532, 2041, 2534, 2731
HgaI	GACGC	3 cut(s)	456, 715, 2289
HhaI	GCGC	3 cut(s)	1063, 1381, 2469
Hin1I	GRCGYC	3 cut(s)	467, 1061, 2300
Hin1II	CATG	7 cut(s)	2197, 2356, 2366, 2386, 2616, 2623, 2642
Hin6I	GCGC	3 cut(s)	1061, 1379, 2467
HinP1I	GCGC	3 cut(s)	1061, 1379, 2467
HincII	GTYRAC	3 cut(s)	169, 684, 1641
HindII	GTYRAC	3 cut(s)	169, 684, 1641
HindIII	AAGCTT	2 cut(s)	329, 1167
HpaII	CCGG	8 cut(s)	98, 192, 1046, 1496, 1532, 2041, 2534, 2731
HphI	GGTGA	8 cut(s)	266, 737, 901, 1129, 1603, 2159, 2783, 2801
Hpy166II	GTNNAC	8 cut(s)	169, 670, 684, 1231, 1641, 1938, 2070, 2092
Hpy8I	GTNNAC	8 cut(s)	169, 670, 684, 1231, 1641, 1938, 2070, 2092
Hpy99I	CGWCG	3 cut(s)	41, 346, 2305
HpyCH4III	ACNGT	8 cut(s)	948, 1267, 1607, 1900, 1966, 2254, 2328, 2764
HpyCH4IV	ACGT	4 cut(s)	135, 1501, 1695, 1940
HpySE526I	ACGT	4 cut(s)	135, 1501, 1695, 1940
Hsp92I	GRCGYC	3 cut(s)	467, 1061, 2300
Hsp92II	CATG	7 cut(s)	2197, 2356, 2366, 2386, 2616, 2623, 2642
HspAI	GCGC	3 cut(s)	1061, 1379, 2467
KasI	GGCGCC	1 cut(s)	1060
Kpn2I	TCCGGA	1 cut(s)	2533
KpnI	GGTACC	1 cut(s)	1255
Ksp22I	TGATCA	1 cut(s)	579
Kzo9I	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
LmnI	GCTCC	8 cut(s)	69, 632, 1398, 1793, 2379, 2391, 2536, 2946
LweI	GCATC	4 cut(s)	1840, 2106, 2220, 2454
MaeII	ACGT	4 cut(s)	135, 1501, 1695, 1940
MaeIII	GTNAC	5 cut(s)	468, 1261, 1502, 1969, 2189
MalI	GATC	7 cut(s)	144, 263, 581, 1728, 1820, 1956, 2555
MbiI	CCGCTC	2 cut(s)	184, 2110
MboI	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
MboII	GAAGA	9 cut(s)	18, 137, 362, 402, 942, 1828, 2398, 2460, 2968
MfeI	CAATTG	1 cut(s)	1542
MflI	RGATCY	1 cut(s)	261
MhlI	GDGCHC	1 cut(s)	2541
Mly113I	GGCGCC	1 cut(s)	1061
MlyI	GAGTC	8 cut(s)	737, 1135, 1637, 2037, 2087, 2097, 2360, 2704
MmeI	TCCRAC	3 cut(s)	423, 2646, 2678
Mph1103I	ATGCAT	1 cut(s)	2235
MroI	TCCGGA	1 cut(s)	2533
MseI	TTAA	4 cut(s)	804, 1218, 1731, 2592
MslI	CAYNNNNRTG	3 cut(s)	1767, 1769, 1979
MspA1I	CMGCKG	2 cut(s)	481, 1622
MspCI	CTTAAG	1 cut(s)	1730
MspI	CCGG	8 cut(s)	98, 192, 1046, 1496, 1532, 2041, 2534, 2731
MspR9I	CCNGG	7 cut(s)	74, 98, 1293, 1346, 1497, 2041, 2282
MunI	CAATTG	1 cut(s)	1542
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	4 cut(s)	74, 1293, 1346, 2282
MvnI	CGCG	1 cut(s)	709
NarI	GGCGCC	1 cut(s)	1061
NciI	CCSGG	3 cut(s)	98, 1497, 2041
NdeI	CATATG	2 cut(s)	2373, 2565
NdeII	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
NlaIII	CATG	7 cut(s)	2197, 2356, 2366, 2386, 2616, 2623, 2642
NmeAIII	GCCGAG	2 cut(s)	699, 2961
NmuCI	GTSAC	2 cut(s)	468, 1502
NsbI	TGCGCA	2 cut(s)	1380, 2468
NsiI	ATGCAT	1 cut(s)	2235
NspI	RCATGY	2 cut(s)	2197, 2356
NspV	TTCGAA	1 cut(s)	1888
OliI	CACNNNNGTG	1 cut(s)	1767
PaeR7I	CTCGAG	1 cut(s)	2075
PciI	ACATGT	1 cut(s)	2193
PcsI	WCGNNNNNNNCGW	3 cut(s)	42, 464, 2690
PctI	GAATGC	1 cut(s)	1174
PfeI	GAWTC	9 cut(s)	574, 1354, 1408, 2036, 2059, 2257, 2681, 2755, 2940
PflFI	GACNNNGTC	1 cut(s)	2087
PfoI	TCCNGGA	1 cut(s)	2039
PleI	GAGTC	8 cut(s)	736, 1135, 1636, 2036, 2086, 2096, 2360, 2703
PluTI	GGCGCC	1 cut(s)	1064
PmaCI	CACGTG	2 cut(s)	1696, 1941
PmlI	CACGTG	2 cut(s)	1696, 1941
PpsI	GAGTC	8 cut(s)	736, 1135, 1636, 2036, 2086, 2096, 2360, 2703
Ppu21I	YACGTR	2 cut(s)	1696, 1941
PpuMI	RGGWCCY	1 cut(s)	88
PscI	ACATGT	1 cut(s)	2193
Psp124BI	GAGCTC	1 cut(s)	2541
Psp5II	RGGWCCY	1 cut(s)	88
Psp6I	CCWGG	4 cut(s)	72, 1291, 1344, 2280
PspCI	CACGTG	2 cut(s)	1696, 1941
PspFI	CCCAGC	2 cut(s)	1622, 2747
PspGI	CCWGG	4 cut(s)	72, 1291, 1344, 2280
PspPI	GGNCC	6 cut(s)	88, 189, 234, 590, 1493, 2432
PspPPI	RGGWCCY	1 cut(s)	88
PspXI	VCTCGAGB	1 cut(s)	2075
PsrI	GAACNNNNNNTAC	2 cut(s)	1919, 1951
PstNI	CAGNNNCTG	2 cut(s)	593, 2435
PsuI	RGATCY	1 cut(s)	261
PsyI	GACNNNGTC	1 cut(s)	2087
PvuII	CAGCTG	2 cut(s)	481, 1622
RsaI	GTAC	4 cut(s)	83, 1253, 1937, 2351
RsaNI	GTAC	4 cut(s)	82, 1252, 1936, 2350
RseI	CAYNNNNRTG	3 cut(s)	1767, 1769, 1979
SacI	GAGCTC	1 cut(s)	2541
SaqAI	TTAA	4 cut(s)	804, 1218, 1731, 2592
Sau3AI	GATC	7 cut(s)	142, 261, 579, 1726, 1818, 1954, 2553
Sau96I	GGNCC	6 cut(s)	88, 189, 234, 590, 1493, 2432
SchI	GAGTC	8 cut(s)	737, 1135, 1637, 2037, 2087, 2097, 2360, 2704
ScrFI	CCNGG	7 cut(s)	74, 98, 1293, 1346, 1497, 2041, 2282
SduI	GDGCHC	1 cut(s)	2541
SfaNI	GCATC	4 cut(s)	1840, 2106, 2220, 2454
SfcI	CTRYAG	1 cut(s)	151
SfoI	GGCGCC	1 cut(s)	1062
Sfr274I	CTCGAG	1 cut(s)	2075
SfuI	TTCGAA	1 cut(s)	1888
SinI	GGWCC	3 cut(s)	88, 189, 234
SlaI	CTCGAG	1 cut(s)	2075
SmiMI	CAYNNNNRTG	3 cut(s)	1767, 1769, 1979
SmlI	CTYRAG	4 cut(s)	1278, 1363, 1730, 2075
SmoI	CTYRAG	4 cut(s)	1278, 1363, 1730, 2075
SspDI	GGCGCC	1 cut(s)	1060
SspI	AATATT	2 cut(s)	241, 785
SstI	GAGCTC	1 cut(s)	2541
StyD4I	CCNGG	7 cut(s)	72, 96, 1291, 1344, 1495, 2039, 2280
StyI	CCWWGG	5 cut(s)	553, 1179, 1224, 1241, 2825
TaaI	ACNGT	8 cut(s)	948, 1267, 1607, 1900, 1966, 2254, 2328, 2764
TaiI	ACGT	4 cut(s)	138, 1504, 1698, 1943
TaqII	GACCGA	2 cut(s)	701, 2100
TatI	WGTACW	3 cut(s)	81, 1935, 2349
TauI	GCSGC	9 cut(s)	618, 621, 624, 627, 630, 712, 1045, 1066, 2935
TfiI	GAWTC	9 cut(s)	574, 1354, 1408, 2036, 2059, 2257, 2681, 2755, 2940
Tru1I	TTAA	4 cut(s)	804, 1218, 1731, 2592
Tru9I	TTAA	4 cut(s)	804, 1218, 1731, 2592
TscAI	CASTG	7 cut(s)	960, 1073, 1272, 1729, 1804, 1969, 2223
TseFI	GTSAC	2 cut(s)	468, 1502
Tsp45I	GTSAC	2 cut(s)	468, 1502
TspDTI	ATGAA	6 cut(s)	581, 1652, 1829, 2144, 2303, 2608
TspGWI	ACGGA	2 cut(s)	687, 2021
TspRI	CASTG	7 cut(s)	960, 1073, 1272, 1729, 1804, 1969, 2223
Tth111I	GACNNNGTC	1 cut(s)	2087
Vha464I	CTTAAG	1 cut(s)	1730
VpaK11BI	GGWCC	3 cut(s)	88, 189, 234
XapI	RAATTY	4 cut(s)	47, 205, 1195, 1659
XbaI	TCTAGA	1 cut(s)	1655
XceI	RCATGY	2 cut(s)	2197, 2356
XhoI	CTCGAG	1 cut(s)	2075
XmiI	GTMKAC	1 cut(s)	2091
Zsp2I	ATGCAT	1 cut(s)	2235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.