Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0015165

Physical Location & Seq

Genomic Coordinates Forward (+)

51715732 .. 51719677

Gene Structure 3946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG291500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3066 bp

ATGACTGTGAGCAACAGCACCGGCAAAGAACGCCTTGTGGTGGAGGTGGTGGCGGCCCACAACCTCATGCCCAAAGACGGCGAAGGCTCGTCTTCCCCATTCGTCGAAATCGAATTTGAAAACCAGAGGCTCCGAACCCAGGTCAAGTACAAGGACCTGAACCCGGTCTGGAACGAGAAGCTAGTCTTTCGTGTCAAGGACGTGGCTGATCTTCCCTACAGAGCCATAGAGGTCAACATTTTCAACGAGCGGAGGTCCGGTAACAGCAGAAATTTTCTGGGTAAAGTTAGAGTTTCTGGTTCCAATATTGCTAAGGAAGGTGAAGAGATTCCTCAGCTTTATACTCTCGACAAAAGAAGCCTCTTTTCTCATATCAGAGGCGAGATTAGCTTGAAGCTTTACCTTTCGACGAGAGAAGAGGTCAAGGAAGTTGGGGCTAATGGAATAGTGGGTTCCTCTGTTTCCAACTCTGCTTCTTCCTCTGGGTTTTCGAAGAAAAGCAAGAAACTTCAGGGTCAAAACTCGGTTATGGTGTCACAGAACCAGTTGATACAAGAAGCAAAGCCAACGCAGCAGGGTCAGAGCAACAATAATCACTCAAAGCCTGTGGAGAACAACCAAGGAGTGATGATGAAGCCGATTCTGATCAATACAGGCCCTGTTTCTGCAATCTCCGGCGGCGGCGGAGCAACCGGTGGAGGAGGCGGTAGCGCAGGTGGTGTTTACGGAAATGGGTTGACGGAGTTTTCGCTGAAGGAGACGCGGCCTCAGCTCGGCGGTGAGTCTTTGAAAAAGGATAAAACTAGCTCTACTTATGACCTTGTTGAGCAAATGCAATATTTGTATGTGAAACTGGTTAAAGCTAGAGACTTCTCTGTTTTTGGTGGAGGGGAGGTTGTGGCTGAAGTGAAGTTGGGAAATTACAGAGGGGTAACAAAGAGGGTGAGTTTGAACAATGTGGAGTGGGGTCAGGTGTTTGCTTTTTCTAAAGATTGCATACAGTCTTCAGTGGTGGAGGTTTTTGTGAAGGAGGGGAACAAAGATGACTTCTTGGGAAGGGTATGGTTTGATTTGAATGAGGTTCCGAGGAGGGTGCCGCCGGATAGTCAGTTGGCGCCGCAGTGGTATAGAATGGAGGATAAGAAGGGAGACAAGTCGAAATCGGGGGAGGTGATGATTTCGATTTGGTTTGGGACTCAGGCTGATGAGGCATTTGCTGAAGCTTGGCATTCCAAGGCTGCAAATGTGAATTTTGATGGGCTTGGTTCGATTAAGTCCAAGGTTTACTTGACACCAAGGCTTTGGTACCTGAGGGTTACAGTGATTGAAGCTCAAGACATTGTTCCTGGGGAGAAAGGGTCTGCAATGATGAGGTTTCCTGAGCTTTCGGCGAAAATCCAGGTGGGGAATCAGGTCTTGAGGACTAGGATTGCGCAGCCTAGCAGTGTGAGGAGCCTCTCGAATCCTTTGTGGAATGAGGAGATGATGTTTGTGGTGGCTGAGCCTATTGAGGACTACTTGCTGGTCTGTGTCGAGGATAGGGTTGGGCCGGGACGTGACGAGGTGGCAGGGAGAGTGGTTATTCCGGTGGCAGCAATTGAAAGGCGAACAGATGATAAGCCTGTCATTTCGAGGTGGTTCAACCTTGACAACGGCAACCGTTTCACCAATGCAGCTGGGGAGTCCAAAGTGTTGACAAGGTTTGGGTCTAGAATTCATTTGAGTGTTTCACTTGATGGAGGTTATCACGTCCTTGATGAGGCTACAATGTATAGCAGTGATCTTAAGCCGACTGATAAGAGGCTTTGGAAACCTCACATTGGTGTGCTTGAAATGGGTATTTTGGGAGCCACTGGGCTTATGCCAATGAAGATCAAAGAAGGGAAAGGAGGGTCTAGTGATGCTTATTGTGTTGCAAAGTATGGACAGAAATGGGTTCGAACTCGAACTGTTGTTGATAGCTTGTCACCTAAGTGGAACGAGCAGTACACGTGGGAGGTGTTTGATCCTTGCACTGTCGTTACCATTGGGGTGTTTGATAATTCTCGGATTGATAAGAACACGGCCAACAATGCTGGAGTCCGTGATTCCCGGATTGGGAAGGTTAGGATTCGATTGTCCACACTCGAGTCTGACCGAGTCTACACTCACTCATATCCGCTCTTGATGCTGCACCCTTCTGGTGTCAAGAAAATGGGTGAGCTTCATTTGGCGGTCAGGTTTTCTTGTGCCAATATGGGTAACATGTTGAACATGTACACTATGCCACTGCTTCCCAAGATGCATTTTGTGCAGCCTTTGACTGTGAATCAACTGGAAACTTTGAGATACCAGGCTATGAATGTGGTGGTGTCGAGGCTTAGCAGGACAGAGCCACCGTTGGGGAGAGAGGTGGTGGAGTACATGCTTGACCATGACTCACATATGTGGAGCATGAGAAGGAGCAAAGCCAACTTCTTCAGGCTAGTGAATGTTCTATCAGGGCCTGTTGCTTTTGGAAGATTTGTGGAGTTGATGCGCAGTTGGCAGAAGCCAATCTGCTCTACCTTGTTCGTTGCAACTTTCCTTTTGCTAGTTGCATTTCCGGAGCTCATAGTCCCAATGATCTTGCTGCATATGGCATTTGTGGGAATGTGGCGGTTTAAGTCCCGCCCTCGCCACCCATGTTTCATGGACACAAATCTGTCCCATGCTGAGAGTGTTTATGCTGATGAGTTGGATGAGGAGTTTGATTCGTTCCCAACGAGTCGGAGTGCAGAGATTGTTAGGATGAGGTATGACCGGCTTAGGAGTGTGGCTGGGAGGATTCAAACTGTTGTTGGTGATGTGGCTACACAAGGTGAGAGGTTCCAAGCATTGCTAAGCTGGAGAGACCCAAGGGCAACATTCTTGTTTGTGATCTTCTGCTTGATTGCTGCTGTTGTGTTCTATGCTGTGCCGATTAGAGTGGTGGTGGTTTTGGTGGGATTGTATGCACTCAGGCCACCGAGATTCAGGAGCAAGCTGCCTTCTCAGCCTTTGAGCTTCTTCAGGAGATTGCCAACAAGGGCTGATAGCTTGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1021

Amino Acids

114.43

Weight (kDa)

9.4

Isoelectric Point (pI)

39.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	11 - 115	1.1e-21	C2 domain
C2	PF00168	280 - 377	1e-05	C2 domain
C2	PF00168	435 - 549	1.8e-13	C2 domain
C2	PF00168	608 - 721	4.4e-20	C2 domain
PRT_C	PF08372	866 - 1021	1.5e-73	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04150
fragaria_vesca	FvH4_2g20170
malus_domestica	MD05G1185200.v1.1
prunus_persica	Prupe.8G211500_v2.0.a1
pyrus_communis	pycom05g16990
rosa_chinensis	RchiOBHm_Chr6g0285931
rosa_laevigata	RLG00000012596
rosa_multiflora	Rmu_co8487333.1_g000001 Rmu_sc0004808.1_g000007
rosa_roxburghii	Rroxscaffold_7G00182590
rosa_rugosa	Rorug06G0177500
rosa_samantha	Rh6AG289600 Rh6BG291500 Rh6CG292400 Rh6DG284500
rosa_wichuraiana	Rw6G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	704
Acc16I	TGCGCA	2 cut(s)	1434, 2519
Acc36I	ACCTGC	1 cut(s)	704
Acc65I	GGTACC	1 cut(s)	1305
AccB1I	GGYRCC	3 cut(s)	1093, 1114, 1305
AccBSI	CCGCTC	2 cut(s)	250, 2161
AccI	GTMKAC	1 cut(s)	2142
AccII	CGCG	1 cut(s)	763
AccIII	TCCGGA	1 cut(s)	2584
AclWI	GGATC	1 cut(s)	2000
AcoI	YGGCCR	1 cut(s)	2064
AcsI	RAATTY	4 cut(s)	113, 271, 1249, 1713
AcuI	CTGAAG	7 cut(s)	494, 773, 924, 990, 1239, 2443, 3013
AcvI	CACGTG	1 cut(s)	1992
AcyI	GRCGYC	1 cut(s)	1115
AdeI	CACNNNGTG	1 cut(s)	2840
AfaI	GTAC	5 cut(s)	149, 1307, 1988, 2258, 2402
AfiI	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 773, 1759, 1820, 2097, 2381
AflII	CTTAAG	1 cut(s)	1784
AflIII	ACRYGT	3 cut(s)	1989, 2244, 2253
AgeI	ACCGGT	1 cut(s)	692
AjiI	CACGTC	3 cut(s)	202, 1556, 1750
AjnI	CCWGG	4 cut(s)	138, 1345, 1398, 2331
AleI	CACNNNNGTG	3 cut(s)	1821, 1972, 2425
Alw21I	GWGCWC	1 cut(s)	2592
Alw26I	GTCTC	4 cut(s)	752, 861, 1143, 2865
AlwI	GGATC	1 cut(s)	2000
AlwNI	CAGNNNCTG	2 cut(s)	659, 2486
Ama87I	CYCGRG	1 cut(s)	2126
Aor13HI	TCCGGA	1 cut(s)	2584
AoxI	GGCC	7 cut(s)	54, 655, 764, 1547, 2064, 2483, 2981
ApoI	RAATTY	4 cut(s)	113, 271, 1249, 1713
ArsI	GACNNNNNNTTYG	2 cut(s)	730, 762
AsiGI	ACCGGT	1 cut(s)	692
Asp700I	GAANNNNTTC	1 cut(s)	327
Asp718I	GGTACC	1 cut(s)	1305
AspLEI	GCGC	4 cut(s)	713, 1117, 1435, 2520
AspS9I	GGNCC	6 cut(s)	55, 154, 255, 656, 1547, 2483
AsuC2I	CCSGG	3 cut(s)	164, 1551, 2092
AsuHPI	GGTGA	9 cut(s)	332, 791, 955, 1183, 1657, 1959, 2210, 2834, 2852
AsuII	TTCGAA	2 cut(s)	491, 1939
AvaI	CYCGRG	1 cut(s)	2126
AvaII	GGWCC	2 cut(s)	154, 255
AxyI	CCTNAGG	1 cut(s)	1310
BanI	GGYRCC	3 cut(s)	1093, 1114, 1305
BanII	GRGCYC	1 cut(s)	2592
BbrPI	CACGTG	1 cut(s)	1992
BbsI	GAAGAC	2 cut(s)	84, 996
Bbv12I	GWGCWC	1 cut(s)	2592
BbvCI	CCTCAGC	2 cut(s)	333, 768
BccI	CCATC	2 cut(s)	1250, 1730
BceAI	ACGGC	3 cut(s)	94, 1669, 2079
BcgI	CGANNNNNNTGC	2 cut(s)	1075, 1109
BciT130I	CCWGG	4 cut(s)	140, 1347, 1400, 2333
BclI	TGATCA	1 cut(s)	645
BcnI	CCSGG	3 cut(s)	164, 1551, 2092
BcoDI	GTCTC	4 cut(s)	752, 861, 1143, 2865
BfaI	CTAG	9 cut(s)	182, 804, 864, 1425, 1440, 1710, 1896, 2465, 2573
BfmI	CTRYAG	1 cut(s)	217
BfoI	RGCGCY	1 cut(s)	1118
BfrI	CTTAAG	1 cut(s)	1784
BfuAI	ACCTGC	1 cut(s)	704
BlpI	GCTNAGC	3 cut(s)	1500, 2360, 2861
Bme1390I	CCNGG	7 cut(s)	140, 164, 1347, 1400, 1551, 2092, 2333
Bme18I	GGWCC	2 cut(s)	154, 255
BmeT110I	CYCGRG	1 cut(s)	2126
BmgBI	CACGTC	3 cut(s)	202, 1556, 1750
BmgT120I	GGNCC	6 cut(s)	55, 154, 255, 656, 1547, 2483
BmrFI	CCNGG	7 cut(s)	140, 164, 1347, 1400, 1551, 2092, 2333
BmrI	ACTGGG	1 cut(s)	1863
BmsI	GCATC	4 cut(s)	1891, 2157, 2271, 2505
BmuI	ACTGGG	1 cut(s)	1863
BpiI	GAAGAC	2 cut(s)	84, 996
BpmI	CTGGAG	2 cut(s)	2097, 2887
Bpu10I	CCTNAGC	5 cut(s)	312, 333, 768, 1380, 2786
Bpu1102I	GCTNAGC	3 cut(s)	1500, 2360, 2861
Bpu14I	TTCGAA	2 cut(s)	491, 1939
BpuEI	CTTGAG	2 cut(s)	1317, 1438
BpuMI	CCSGG	3 cut(s)	164, 1551, 2092
BsaAI	YACGTR	1 cut(s)	1992
BsaBI	GATNNNNATC	1 cut(s)	644
BsaHI	GRCGYC	1 cut(s)	1115
BsaI	GGTCTC	1 cut(s)	2865
BsaJI	CCNNGG	8 cut(s)	138, 619, 1085, 1233, 1278, 1295, 1346, 2876
BsaWI	WCCGGW	4 cut(s)	257, 692, 1585, 2584
BsaXI	ACNNNNNCTCC	8 cut(s)	244, 274, 879, 909, 1343, 1373, 1472, 1502
Bsc4I	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 773, 1759, 1820, 2097, 2381
Bse118I	RCCGGY	3 cut(s)	20, 692, 2781
Bse1I	ACTGG	4 cut(s)	544, 858, 1858, 2319
Bse21I	CCTNAGG	1 cut(s)	1310
Bse3DI	GCAATG	2 cut(s)	1371, 2855
Bse8I	GATNNNNATC	1 cut(s)	644
BseAI	TCCGGA	1 cut(s)	2584
BseBI	CCWGG	4 cut(s)	140, 1347, 1400, 2333
BseDI	CCNNGG	8 cut(s)	138, 619, 1085, 1233, 1278, 1295, 1346, 2876
BseGI	GGATG	2 cut(s)	2725, 2775
BseJI	GATNNNNATC	1 cut(s)	644
BseLI	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 773, 1759, 1820, 2097, 2381
BseMI	GCAATG	2 cut(s)	1371, 2855
BseMII	CTCAG	9 cut(s)	347, 782, 1211, 1301, 1371, 1491, 2685, 2992, 3026
BseNI	ACTGG	4 cut(s)	544, 858, 1858, 2319
BseRI	GAGGAG	5 cut(s)	714, 1102, 1465, 1493, 2738
BseYI	CCCAGC	2 cut(s)	1676, 2798
BsgI	GTGCAG	3 cut(s)	2156, 2312, 2775
Bsh1236I	CGCG	1 cut(s)	763
BshFI	GGCC	7 cut(s)	56, 657, 766, 1549, 2066, 2485, 2983
BshNI	GGYRCC	3 cut(s)	1093, 1114, 1305
BshTI	ACCGGT	1 cut(s)	692
BsiHKAI	GWGCWC	1 cut(s)	2592
BsiHKCI	CYCGRG	1 cut(s)	2126
BslFI	GGGAC	5 cut(s)	1207, 1566, 2582, 2632, 2671
BslI	CCNNNNNNNGG	9 cut(s)	40, 77, 139, 163, 773, 1759, 1820, 2097, 2381
BsmAI	GTCTC	4 cut(s)	752, 861, 1143, 2865
BsmBI	CGTCTC	1 cut(s)	752
BsmFI	GGGAC	5 cut(s)	1207, 1566, 2582, 2632, 2671
BsmI	GAATGC	1 cut(s)	1228
BsnI	GGCC	7 cut(s)	56, 657, 766, 1549, 2066, 2485, 2983
Bso31I	GGTCTC	1 cut(s)	2865
BsoBI	CYCGRG	1 cut(s)	2126
Bsp119I	TTCGAA	2 cut(s)	491, 1939
Bsp1286I	GDGCHC	1 cut(s)	2592
Bsp13I	TCCGGA	1 cut(s)	2584
Bsp1407I	TGTACA	1 cut(s)	2256
Bsp143I	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
Bsp1720I	GCTNAGC	3 cut(s)	1500, 2360, 2861
BspANI	GGCC	7 cut(s)	56, 657, 766, 1549, 2066, 2485, 2983
BspCNI	CTCAG	9 cut(s)	346, 781, 1210, 1302, 1372, 1492, 2686, 2991, 3025
BspEI	TCCGGA	1 cut(s)	2584
BspFNI	CGCG	1 cut(s)	763
BspMI	ACCTGC	1 cut(s)	704
BspPI	GGATC	1 cut(s)	2000
BspT104I	TTCGAA	2 cut(s)	491, 1939
BspT107I	GGYRCC	3 cut(s)	1093, 1114, 1305
BspTI	CTTAAG	1 cut(s)	1784
BspTNI	GGTCTC	1 cut(s)	2865
BsrBI	CCGCTC	2 cut(s)	250, 2161
BsrDI	GCAATG	2 cut(s)	1371, 2855
BsrFI	RCCGGY	3 cut(s)	20, 692, 2781
BsrGI	TGTACA	1 cut(s)	2256
BsrI	ACTGG	4 cut(s)	544, 858, 1858, 2319
BssAI	RCCGGY	3 cut(s)	20, 692, 2781
BssECI	CCNNGG	8 cut(s)	138, 619, 1085, 1233, 1278, 1295, 1346, 2876
BssMI	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
BssNI	GRCGYC	1 cut(s)	1115
BssT1I	CCWWGG	5 cut(s)	619, 1233, 1278, 1295, 2876
Bst2UI	CCWGG	4 cut(s)	140, 1347, 1400, 2333
Bst4CI	ACNGT	9 cut(s)	7, 1002, 1321, 1661, 1951, 2017, 2305, 2379, 2815
Bst6I	CTCTTC	2 cut(s)	318, 411
BstACI	GRCGYC	1 cut(s)	1115
BstAFI	CTTAAG	1 cut(s)	1784
BstAPI	GCANNNNNTGC	1 cut(s)	2290
BstAUI	TGTACA	1 cut(s)	2256
BstBAI	YACGTR	1 cut(s)	1992
BstBI	TTCGAA	2 cut(s)	491, 1939
BstC8I	GCNNGC	1 cut(s)	3002
BstENI	CCTNNNNNAGG	1 cut(s)	1757
BstF5I	GGATG	2 cut(s)	2725, 2775
BstFNI	CGCG	1 cut(s)	763
BstH2I	RGCGCY	1 cut(s)	1118
BstHHI	GCGC	4 cut(s)	713, 1117, 1435, 2520
BstKTI	GATC	7 cut(s)	211, 648, 1783, 1875, 2008, 2607, 2901
BstMAI	GTCTC	4 cut(s)	752, 861, 1143, 2865
BstMBI	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
BstNI	CCWGG	4 cut(s)	140, 1347, 1400, 2333
BstNSI	RCATGY	3 cut(s)	2248, 2257, 2407
BstSCI	CCNGG	7 cut(s)	138, 162, 1345, 1398, 1549, 2090, 2331
BstSFI	CTRYAG	1 cut(s)	217
BstUI	CGCG	1 cut(s)	763
BstV2I	GAAGAC	2 cut(s)	84, 996
BstXI	CCANNNNNNTGG	1 cut(s)	1302
Bsu36I	CCTNAGG	1 cut(s)	1310
BsuRI	GGCC	7 cut(s)	56, 657, 766, 1549, 2066, 2485, 2983
BtrI	CACGTC	3 cut(s)	202, 1556, 1750
BtsCI	GGATG	2 cut(s)	2725, 2775
BtsI	GCAGTG	4 cut(s)	1127, 1450, 1783, 2267
BtsIMutI	CAGTG	8 cut(s)	1014, 1127, 1326, 1450, 1783, 1851, 2013, 2267
BveI	ACCTGC	1 cut(s)	704
Cac8I	GCNNGC	1 cut(s)	3002
CaiI	CAGNNNCTG	2 cut(s)	659, 2486
CfoI	GCGC	4 cut(s)	713, 1117, 1435, 2520
Cfr10I	RCCGGY	3 cut(s)	20, 692, 2781
Cfr13I	GGNCC	6 cut(s)	55, 154, 255, 656, 1547, 2483
CseI	GACGC	1 cut(s)	769
Csp6I	GTAC	5 cut(s)	148, 1306, 1987, 2257, 2401
CspAI	ACCGGT	1 cut(s)	692
CspCI	CAANNNNNGTGG	2 cut(s)	588, 623
CviAII	CATG	9 cut(s)	67, 2245, 2254, 2404, 2414, 2434, 2664, 2671, 2690
CviQI	GTAC	5 cut(s)	148, 1306, 1987, 2257, 2401
DinI	GGCGCC	1 cut(s)	1116
DpnI	GATC	7 cut(s)	210, 647, 1782, 1874, 2007, 2606, 2900
DpnII	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
DraIII	CACNNNGTG	1 cut(s)	2840
EaeI	YGGCCR	1 cut(s)	2064
Eam1104I	CTCTTC	2 cut(s)	318, 411
EarI	CTCTTC	2 cut(s)	318, 411
EciI	GGCGGA	1 cut(s)	699
Ecl136II	GAGCTC	1 cut(s)	2590
Eco130I	CCWWGG	5 cut(s)	619, 1233, 1278, 1295, 2876
Eco24I	GRGCYC	1 cut(s)	2592
Eco31I	GGTCTC	1 cut(s)	2865
Eco47I	GGWCC	2 cut(s)	154, 255
Eco53kI	GAGCTC	1 cut(s)	2590
Eco57I	CTGAAG	7 cut(s)	494, 773, 924, 990, 1239, 2443, 3013
Eco72I	CACGTG	1 cut(s)	1992
Eco81I	CCTNAGG	1 cut(s)	1310
Eco88I	CYCGRG	1 cut(s)	2126
EcoICRI	GAGCTC	1 cut(s)	2590
EcoNI	CCTNNNNNAGG	1 cut(s)	1757
EcoO109I	RGGNCCY	3 cut(s)	154, 656, 2483
EcoRI	GAATTC	1 cut(s)	1713
EcoRII	CCWGG	4 cut(s)	138, 1345, 1398, 2331
EcoT14I	CCWWGG	5 cut(s)	619, 1233, 1278, 1295, 2876
EcoT22I	ATGCAT	1 cut(s)	2286
EcoT38I	GRGCYC	1 cut(s)	2592
EgeI	GGCGCC	1 cut(s)	1116
EheI	GGCGCC	1 cut(s)	1116
ErhI	CCWWGG	5 cut(s)	619, 1233, 1278, 1295, 2876
Esp3I	CGTCTC	1 cut(s)	752
FaeI	CATG	9 cut(s)	70, 2248, 2257, 2407, 2417, 2437, 2667, 2674, 2693
FalI	AAGNNNNNCTT	6 cut(s)	18, 50, 170, 202, 1271, 1303
FaqI	GGGAC	5 cut(s)	1207, 1566, 2582, 2632, 2671
FatI	CATG	9 cut(s)	66, 2244, 2253, 2403, 2413, 2433, 2663, 2670, 2689
FauI	CCCGC	1 cut(s)	2657
FauNDI	CATATG	2 cut(s)	2424, 2616
FbaI	TGATCA	1 cut(s)	645
FblI	GTMKAC	1 cut(s)	2142
FokI	GGATG	2 cut(s)	2732, 2782
FriOI	GRGCYC	1 cut(s)	2592
FspBI	CTAG	9 cut(s)	182, 804, 864, 1425, 1440, 1710, 1896, 2465, 2573
FspI	TGCGCA	2 cut(s)	1434, 2519
GlaI	GCGC	4 cut(s)	712, 1116, 1434, 2519
GsaI	CCCAGC	2 cut(s)	1680, 2802
GsuI	CTGGAG	2 cut(s)	2097, 2887
HaeII	RGCGCY	1 cut(s)	1118
HaeIII	GGCC	7 cut(s)	56, 657, 766, 1549, 2066, 2485, 2983
HgaI	GACGC	1 cut(s)	769
HhaI	GCGC	4 cut(s)	713, 1117, 1435, 2520
Hin1I	GRCGYC	1 cut(s)	1115
Hin1II	CATG	9 cut(s)	70, 2248, 2257, 2407, 2417, 2437, 2667, 2674, 2693
Hin6I	GCGC	4 cut(s)	711, 1115, 1433, 2518
HinP1I	GCGC	4 cut(s)	711, 1115, 1433, 2518
HincII	GTYRAC	3 cut(s)	235, 738, 1695
HindII	GTYRAC	3 cut(s)	235, 738, 1695
HindIII	AAGCTT	2 cut(s)	395, 1221
HphI	GGTGA	9 cut(s)	332, 791, 955, 1183, 1657, 1959, 2210, 2834, 2852
Hpy166II	GTNNAC	9 cut(s)	235, 724, 738, 1285, 1695, 1989, 2121, 2143, 2259
Hpy188I	TCNGA	8 cut(s)	134, 377, 582, 645, 1086, 2049, 2134, 2751
Hpy8I	GTNNAC	9 cut(s)	235, 724, 738, 1285, 1695, 1989, 2121, 2143, 2259
Hpy99I	CGWCG	2 cut(s)	107, 412
HpyCH4III	ACNGT	9 cut(s)	7, 1002, 1321, 1661, 1951, 2017, 2305, 2379, 2815
HpyCH4IV	ACGT	4 cut(s)	201, 1555, 1749, 1991
HpySE526I	ACGT	4 cut(s)	201, 1555, 1749, 1991
Hsp92I	GRCGYC	1 cut(s)	1115
Hsp92II	CATG	9 cut(s)	70, 2248, 2257, 2407, 2417, 2437, 2667, 2674, 2693
HspAI	GCGC	4 cut(s)	711, 1115, 1433, 2518
KasI	GGCGCC	1 cut(s)	1114
Kpn2I	TCCGGA	1 cut(s)	2584
KpnI	GGTACC	1 cut(s)	1309
Ksp22I	TGATCA	1 cut(s)	645
Kzo9I	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
LmnI	GCTCC	8 cut(s)	135, 686, 1452, 1847, 2430, 2442, 2587, 2997
LweI	GCATC	4 cut(s)	1891, 2157, 2271, 2505
MaeI	CTAG	9 cut(s)	182, 804, 864, 1425, 1440, 1710, 1896, 2465, 2573
MaeII	ACGT	4 cut(s)	201, 1555, 1749, 1991
MaeIII	GTNAC	8 cut(s)	260, 534, 931, 1315, 1556, 1965, 2020, 2240
MalI	GATC	7 cut(s)	210, 647, 1782, 1874, 2007, 2606, 2900
MbiI	CCGCTC	2 cut(s)	250, 2161
MboI	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
MfeI	CAATTG	1 cut(s)	1596
MhlI	GDGCHC	1 cut(s)	2592
MluCI	AATT	7 cut(s)	113, 271, 919, 1249, 1596, 1713, 2041
Mly113I	GGCGCC	1 cut(s)	1115
MlyI	GAGTC	8 cut(s)	791, 1189, 1691, 2088, 2138, 2148, 2411, 2755
MmeI	TCCRAC	3 cut(s)	489, 2697, 2729
Mph1103I	ATGCAT	1 cut(s)	2286
MroI	TCCGGA	1 cut(s)	2584
MroXI	GAANNNNTTC	1 cut(s)	327
MseI	TTAA	4 cut(s)	858, 1272, 1785, 2643
MslI	CAYNNNNRTG	6 cut(s)	1722, 1821, 1823, 1972, 2030, 2425
MspA1I	CMGCKG	1 cut(s)	1676
MspCI	CTTAAG	1 cut(s)	1784
MspR9I	CCNGG	7 cut(s)	140, 164, 1347, 1400, 1551, 2092, 2333
MunI	CAATTG	1 cut(s)	1596
Mva1269I	GAATGC	1 cut(s)	1228
MvaI	CCWGG	4 cut(s)	140, 1347, 1400, 2333
MvnI	CGCG	1 cut(s)	763
NarI	GGCGCC	1 cut(s)	1115
NciI	CCSGG	3 cut(s)	164, 1551, 2092
NdeI	CATATG	2 cut(s)	2424, 2616
NdeII	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
NlaIII	CATG	9 cut(s)	70, 2248, 2257, 2407, 2417, 2437, 2667, 2674, 2693
NmeAIII	GCCGAG	1 cut(s)	753
NmuCI	GTSAC	3 cut(s)	534, 1556, 1965
NsbI	TGCGCA	2 cut(s)	1434, 2519
NsiI	ATGCAT	1 cut(s)	2286
NspI	RCATGY	3 cut(s)	2248, 2257, 2407
NspV	TTCGAA	2 cut(s)	491, 1939
OliI	CACNNNNGTG	3 cut(s)	1821, 1972, 2425
PaeR7I	CTCGAG	1 cut(s)	2126
PaqCI	CACCTGC	1 cut(s)	704
PciI	ACATGT	2 cut(s)	2244, 2253
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 2741
PctI	GAATGC	1 cut(s)	1228
PdmI	GAANNNNTTC	1 cut(s)	327
PflFI	GACNNNGTC	1 cut(s)	2138
PfoI	TCCNGGA	1 cut(s)	2090
PinAI	ACCGGT	1 cut(s)	692
PleI	GAGTC	8 cut(s)	790, 1189, 1690, 2087, 2137, 2147, 2411, 2754
PluTI	GGCGCC	1 cut(s)	1118
PmaCI	CACGTG	1 cut(s)	1992
PmlI	CACGTG	1 cut(s)	1992
PpsI	GAGTC	8 cut(s)	790, 1189, 1690, 2087, 2137, 2147, 2411, 2754
Ppu21I	YACGTR	1 cut(s)	1992
PpuMI	RGGWCCY	1 cut(s)	154
PscI	ACATGT	2 cut(s)	2244, 2253
Psp124BI	GAGCTC	1 cut(s)	2592
Psp5II	RGGWCCY	1 cut(s)	154
Psp6I	CCWGG	4 cut(s)	138, 1345, 1398, 2331
PspCI	CACGTG	1 cut(s)	1992
PspFI	CCCAGC	2 cut(s)	1676, 2798
PspGI	CCWGG	4 cut(s)	138, 1345, 1398, 2331
PspPI	GGNCC	6 cut(s)	55, 154, 255, 656, 1547, 2483
PspPPI	RGGWCCY	1 cut(s)	154
PspXI	VCTCGAGB	1 cut(s)	2126
PsrI	GAACNNNNNNTAC	2 cut(s)	1970, 2002
PstNI	CAGNNNCTG	2 cut(s)	659, 2486
PsyI	GACNNNGTC	1 cut(s)	2138
PvuII	CAGCTG	1 cut(s)	1676
RsaI	GTAC	5 cut(s)	149, 1307, 1988, 2258, 2402
RsaNI	GTAC	5 cut(s)	148, 1306, 1987, 2257, 2401
RseI	CAYNNNNRTG	6 cut(s)	1722, 1821, 1823, 1972, 2030, 2425
SacI	GAGCTC	1 cut(s)	2592
SaqAI	TTAA	4 cut(s)	858, 1272, 1785, 2643
Sau3AI	GATC	7 cut(s)	208, 645, 1780, 1872, 2005, 2604, 2898
Sau96I	GGNCC	6 cut(s)	55, 154, 255, 656, 1547, 2483
SchI	GAGTC	8 cut(s)	791, 1189, 1691, 2088, 2138, 2148, 2411, 2755
ScrFI	CCNGG	7 cut(s)	140, 164, 1347, 1400, 1551, 2092, 2333
SduI	GDGCHC	1 cut(s)	2592
SfaNI	GCATC	4 cut(s)	1891, 2157, 2271, 2505
SfcI	CTRYAG	1 cut(s)	217
SfoI	GGCGCC	1 cut(s)	1116
Sfr274I	CTCGAG	1 cut(s)	2126
SfuI	TTCGAA	2 cut(s)	491, 1939
SinI	GGWCC	2 cut(s)	154, 255
SlaI	CTCGAG	1 cut(s)	2126
SmiMI	CAYNNNNRTG	6 cut(s)	1722, 1821, 1823, 1972, 2030, 2425
SmlI	CTYRAG	4 cut(s)	1332, 1417, 1784, 2126
SmoI	CTYRAG	4 cut(s)	1332, 1417, 1784, 2126
Sse9I	AATT	7 cut(s)	113, 271, 919, 1249, 1596, 1713, 2041
SspDI	GGCGCC	1 cut(s)	1114
SspI	AATATT	2 cut(s)	307, 839
SspMI	CTAG	9 cut(s)	182, 804, 864, 1425, 1440, 1710, 1896, 2465, 2573
SstI	GAGCTC	1 cut(s)	2592
StyD4I	CCNGG	7 cut(s)	138, 162, 1345, 1398, 1549, 2090, 2331
StyI	CCWWGG	5 cut(s)	619, 1233, 1278, 1295, 2876
TaaI	ACNGT	9 cut(s)	7, 1002, 1321, 1661, 1951, 2017, 2305, 2379, 2815
TaiI	ACGT	4 cut(s)	204, 1558, 1752, 1994
TaqII	GACCGA	1 cut(s)	2151
TasI	AATT	7 cut(s)	113, 271, 919, 1249, 1596, 1713, 2041
TatI	WGTACW	4 cut(s)	147, 1986, 2256, 2400
TauI	GCSGC	6 cut(s)	56, 681, 684, 766, 1099, 1120
Tru1I	TTAA	4 cut(s)	858, 1272, 1785, 2643
Tru9I	TTAA	4 cut(s)	858, 1272, 1785, 2643
TscAI	CASTG	8 cut(s)	1014, 1127, 1326, 1450, 1783, 1858, 2020, 2274
TseFI	GTSAC	3 cut(s)	534, 1556, 1965
Tsp45I	GTSAC	3 cut(s)	534, 1556, 1965
TspDTI	ATGAA	6 cut(s)	647, 1706, 1883, 2195, 2354, 2659
TspGWI	ACGGA	3 cut(s)	741, 755, 2072
TspRI	CASTG	8 cut(s)	1014, 1127, 1326, 1450, 1783, 1858, 2020, 2274
Tth111I	GACNNNGTC	1 cut(s)	2138
Vha464I	CTTAAG	1 cut(s)	1784
VpaK11BI	GGWCC	2 cut(s)	154, 255
XagI	CCTNNNNNAGG	1 cut(s)	1757
XapI	RAATTY	4 cut(s)	113, 271, 1249, 1713
XbaI	TCTAGA	1 cut(s)	1709
XceI	RCATGY	3 cut(s)	2248, 2257, 2407
XhoI	CTCGAG	1 cut(s)	2126
XmiI	GTMKAC	1 cut(s)	2142
XmnI	GAANNNNTTC	1 cut(s)	327
XspI	CTAG	9 cut(s)	182, 804, 864, 1425, 1440, 1710, 1896, 2465, 2573
Zsp2I	ATGCAT	1 cut(s)	2286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.