Rroxscaffold_7G00182590

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
21672842 .. 21675897
3056 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00182590.1

Sequence Viewer

Length: 2937 bp
ATGACTGTGAGCAACAGCACCGGCAAAGAACGCCTTGTGGTGGAGGTGGTGGCGGCCCACAACCTCATGCCCAAAGACGGCGAAGGCTCGTCTTCCCCATTCGTCGAAATCGAATTTGAAAACCAGAGGCTCCGAACCCAGGTCAAGTACAAGGACCTGAACCCGGTCTGGAACGAGAAGCTAGTCTTTCGTGTCAAGGACGTGGCTGATCTTCCCTACAGAGCCATAGAGGTCAACATTTTCAACGAGCGGAGGTCCGGTAACAGCAGAAATTTTCTGGGTAAAGTCAGAGTTTCAGGGTCCAATATTGCCAAAGAAGGTGAGGAGATCCCTCAGCTTTATACTCTTGACAAAAGAAGCCTCTTTTCTCATATCAGAGGCGAGATTAGCTTGAAGCTTTACCTTTCGACGAGAGAAGAGGTCAAGGAAGTTGGGGCTAATGGAATAGTGGGTTCCTCTGTTTCCAACTCTGCTTCTTCCTCTGGGTTTTCGAAGAAAAGCAAGAAACTTCAGGGTCAAAACTCGGTTATGGTGTCACAGAACCAGTTGATACAAGAAGCAAAGCCAACGCAGCAGGGTCAGAGCAACAATAATCACTCAAAGCCTGTGGAGAACAACCAAGGAGTGATGATGAAGCCGATTCTGATCAATACAGGCCCTGTTTCTGCAATCTCCGGCGGCGGCGGAGCAACCGGCGGAGGCGGAGGCGGTGTTTGCGGAAATGGGTTGACGGAGTTTTCGCTGAAGGAGACGCGGCCTCAGCTCGGCGGTGAGTCTTTGAAAAAGGATAAAAGTAGCTCTACTTATGACCTTGTTGAGCAAATGCAATATTTGTATGTGAAACTGGTTAAAGCTAGAGACTTCTCTGTTTTTGGTGGAGGGGAGGTTGTGGCTGAAGTGAAGTTGGGAAATTACAGAGGGATAACAAAGAGGGTGAGTTTGAACAATGTGGAGTGGGGTCAGGTGTTTGCTTTTTCTAAAGATTGCATACAGTCTTCTGTGGTGGAGGTTTTTGTGAAGGAGGGGAACAAAGATGACTTCTTGGGAAGGGTGTGGTTTGATTTGAATGAGGCTGATGAGGCATTTGCTGAAGCTTGGCATTCCAAGGCTGCAAATGTGAATTTTGATGGGCTTGGTTCGATTAAGTCCAAGGTTTACTTGACACCAAGGCTTTGGTACTTGAGGGTTACAGTGATTGAAGCTCAAGACATTGTTCCTGGGGAGAAAGGGTCTGCAATGATGAGGTTTCCTGAGCTTTCGGCGAAAATCCAGGTGGGGAATCAGATCTTGAGGACTAGGATTGCGCAGCCTTGCAGTGTGAGGAGCCTCTCGAATCCTTTGTGGAATGAGGAGATGATGTTTGTGGTGGCTGAGCCGATTGAGGACTACTTGCTGGTCTGTGTCGAGGATAGGGTTGGGCCGGGACGTGACGAGGTGGCAGGGAGAGTGGTTATTCCGGTGGCAGCAATTGAAAGGCGAACGGATGATAAGCCTGTTGTTTCAAGGTGGTTCAACCTTGACAACGGCAACCGTTTCACCAATGCAGCTGGGGAGTCCAAAGTGTTGACAAGGTTTGGGTCTAGAATTCATTTGAGGGTTTCACTTGATGGAGGTTATCACGTGCTTGATGAGGCTACAATGTATAGCAGTGATCTTAAGCCGACTGATAAGAGGCTTTGGAAGCCTCACATTGGTGTGCTTGAAATGGGTATTTTGGGAGCCACTGGGCTTATGCCGATGAAGATCAAAGAAGGGAAAGGAGGGTCTAGTGATGCTTATTGTGTTGCAAAGTATGGACAGAAATGGGTTCGAACTCGAACTGTTGTTGATAGCTTGGCGCCCAAGTGGAACGAGCAGTACACGTGGGAGGTGTTTGATCCTTGCACTGTTGTTACCATTGGGGTGTTTGATAATTCTCGGATTGATAAGAACACGGCCAACAATGCTGGAGTCCGTGATTCCCGGATTGGGAAGGTTAGGATTCGATTGTCCACACTCGAGTCTGACCGAGTCTACACTCACTCATATCCGCTCTTGATGCTGCACCCTTCTGGTGTCAAGAAAATGGGTGAGCTTCATTTGGCGGTCAGGTTTTCTTGTGCCAATATGGGTAACATGTTGAACATGTACACTATGCCACTGCTTCCCAAGATGCATTTTGTGCAGCCTTTGACTGTGAATCAACTGGAAACTCTGAGATACCAGGCTATGAATGTGGTGGTGTCGAGGCTTAGCAGGACAGAGCCACCGTTGGGGAGAGAGGTAGTGGAGTACATGCTTGACCATGACTCGCATATGTGGAGCATGAGAAGGAGCAAAGCCAATTTCTTCAGGCTAGTGAATGTTCTATCAGGGCCTGTTGCTTTTGGAAGATTTGTGGAGTTGATGCGCAGTTGGCAGAAGCCAATCTGCTCTGCCTTGTTCGTTGCAACTTTCCTTTTGTTAGTTGCATTTCCGGAGCTCATAGTCTCAATGATCTTGCTGCATATGGCATTTGTGGGAATGTGGAGGTTTAAGTCCCGCCCTCGCCACCCATGTTTCATGGACACTAATCTATCCCATGCTGAGAGTGTTTATGCTGATGAGTTGGATGAGGAGTTTGATTCGTTCCCAACGAGTCGGAGTGCAGAGATTGTTAGGATGAGGTATGACCGGCTTAGGAGTGTGGCTGGGAGGATTCAAACTGTTGTTGGTGATGTGGCTACACAAGGTGAGAGGTTCCAAGCATTGCTAAGCTGGAGAGACCCAAGGGCAACATTCTTGTTTGTGATCTTCTGCTTGATTGCTGCTGTTGTGTTCTATGCTGTGCCGATTAGAGTGGTGGTGGTTTTGGTGGGATTGTATGCACTCAGGCCGCCGAGATTCAGGAGCAAGCTGCCTTCTCAGCCTTTGAGCTTCTTCAGGAGGTTGCCAACTAGGGCTGATAGCTTGTTGTAG

Protein Analysis

978

Amino Acids

109.55

Weight (kDa)

9.36

Isoelectric Point (pI)

39.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 11 - 115 1e-21 C2 domain
C2 PF00168 392 - 506 3.2e-13 C2 domain
C2 PF00168 565 - 678 1.1e-19 C2 domain
PRT_C PF08372 824 - 978 2.6e-73 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04150
fragaria_vesca FvH4_2g20170
malus_domestica MD05G1185200.v1.1
prunus_persica Prupe.8G211500_v2.0.a1
pyrus_communis pycom05g16990
rosa_chinensis RchiOBHm_Chr6g0285931
rosa_laevigata RLG00000012596
rosa_multiflora Rmu_co8487333.1_g000001 Rmu_sc0004808.1_g000007
rosa_roxburghii Rroxscaffold_7G00182590
rosa_rugosa Rorug06G0177500
rosa_samantha Rh6AG289600 Rh6BG291500 Rh6CG292400 Rh6DG284500
rosa_wichuraiana Rw6G024950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1305, 2390
AccB1I GGYRCC 1 cut(s) 1837
AccBSI CCGCTC 2 cut(s) 250, 2032
AccI GTMKAC 1 cut(s) 2013
AccII CGCG 1 cut(s) 754
AccIII TCCGGA 1 cut(s) 2455
AclWI GGATC 2 cut(s) 322, 1871
AcoI YGGCCR 1 cut(s) 1935
AcsI RAATTY 4 cut(s) 113, 271, 1120, 1584
AcuI CTGAAG 6 cut(s) 494, 764, 915, 1110, 2314, 2884
AcvI CACGTG 2 cut(s) 1621, 1863
AcyI GRCGYC 1 cut(s) 1838
AdeI CACNNNGTG 1 cut(s) 2711
AfaI GTAC 5 cut(s) 149, 1178, 1859, 2129, 2273
AfiI CCNNNNNNNGG 8 cut(s) 40, 77, 139, 163, 764, 1691, 1968, 2252
AflII CTTAAG 1 cut(s) 1655
AflIII ACRYGT 3 cut(s) 1860, 2115, 2124
AjiI CACGTC 2 cut(s) 202, 1427
AjnI CCWGG 4 cut(s) 138, 1216, 1269, 2202
AleI CACNNNNGTG 1 cut(s) 1692
Alw21I GWGCWC 1 cut(s) 2463
Alw26I GTCTC 4 cut(s) 743, 852, 2473, 2736
AlwI GGATC 2 cut(s) 322, 1871
AlwNI CAGNNNCTG 2 cut(s) 659, 2357
Ama87I CYCGRG 1 cut(s) 1997
Aor13HI TCCGGA 1 cut(s) 2455
AoxI GGCC 7 cut(s) 54, 655, 755, 1418, 1935, 2354, 2852
ApoI RAATTY 4 cut(s) 113, 271, 1120, 1584
ArsI GACNNNNNNTTYG 2 cut(s) 721, 753
AspLEI GCGC 3 cut(s) 1306, 1840, 2391
AspS9I GGNCC 7 cut(s) 55, 154, 255, 300, 656, 1418, 2354
AsuC2I CCSGG 3 cut(s) 164, 1422, 1963
AsuHPI GGTGA 7 cut(s) 332, 782, 946, 1528, 2081, 2705, 2723
AsuII TTCGAA 2 cut(s) 491, 1810
AvaI CYCGRG 1 cut(s) 1997
AvaII GGWCC 3 cut(s) 154, 255, 300
BanI GGYRCC 1 cut(s) 1837
BanII GRGCYC 1 cut(s) 2463
BbrPI CACGTG 2 cut(s) 1621, 1863
BbsI GAAGAC 2 cut(s) 84, 987
Bbv12I GWGCWC 1 cut(s) 2463
BbvCI CCTCAGC 2 cut(s) 333, 759
BccI CCATC 2 cut(s) 1121, 1601
BceAI ACGGC 3 cut(s) 94, 1540, 1950
BciT130I CCWGG 4 cut(s) 140, 1218, 1271, 2204
BclI TGATCA 1 cut(s) 645
BcnI CCSGG 3 cut(s) 164, 1422, 1963
BcoDI GTCTC 4 cut(s) 743, 852, 2473, 2736
BfaI CTAG 7 cut(s) 182, 855, 1296, 1581, 1767, 2336, 2916
BfmI CTRYAG 1 cut(s) 217
BfoI RGCGCY 1 cut(s) 1841
BfrI CTTAAG 1 cut(s) 1655
BglII AGATCT 1 cut(s) 1284
BlpI GCTNAGC 3 cut(s) 1371, 2231, 2732
Bme1390I CCNGG 7 cut(s) 140, 164, 1218, 1271, 1422, 1963, 2204
Bme18I GGWCC 3 cut(s) 154, 255, 300
BmeT110I CYCGRG 1 cut(s) 1997
BmgBI CACGTC 2 cut(s) 202, 1427
BmgT120I GGNCC 7 cut(s) 55, 154, 255, 300, 656, 1418, 2354
BmiI GGNNCC 7 cut(s) 131, 301, 454, 1325, 1720, 1839, 2720
BmrFI CCNGG 7 cut(s) 140, 164, 1218, 1271, 1422, 1963, 2204
BmrI ACTGGG 1 cut(s) 1734
BmsI GCATC 4 cut(s) 1762, 2028, 2142, 2376
BmuI ACTGGG 1 cut(s) 1734
BpiI GAAGAC 2 cut(s) 84, 987
BpmI CTGGAG 2 cut(s) 1968, 2758
Bpu10I CCTNAGC 4 cut(s) 333, 759, 1251, 2657
Bpu1102I GCTNAGC 3 cut(s) 1371, 2231, 2732
Bpu14I TTCGAA 2 cut(s) 491, 1810
BpuEI CTTGAG 3 cut(s) 1188, 1201, 1309
BpuMI CCSGG 3 cut(s) 164, 1422, 1963
BsaAI YACGTR 2 cut(s) 1621, 1863
BsaBI GATNNNNATC 2 cut(s) 644, 1742
BsaHI GRCGYC 1 cut(s) 1838
BsaI GGTCTC 1 cut(s) 2736
BsaJI CCNNGG 7 cut(s) 138, 619, 1104, 1149, 1166, 1217, 2747
BsaWI WCCGGW 3 cut(s) 257, 1456, 2455
Bsc4I CCNNNNNNNGG 8 cut(s) 40, 77, 139, 163, 764, 1691, 1968, 2252
Bse118I RCCGGY 3 cut(s) 20, 692, 2652
Bse1I ACTGG 4 cut(s) 544, 849, 1729, 2190
Bse3DI GCAATG 2 cut(s) 1242, 2726
Bse8I GATNNNNATC 2 cut(s) 644, 1742
BseAI TCCGGA 1 cut(s) 2455
BseBI CCWGG 4 cut(s) 140, 1218, 1271, 2204
BseDI CCNNGG 7 cut(s) 138, 619, 1104, 1149, 1166, 1217, 2747
BseGI GGATG 3 cut(s) 1489, 2596, 2646
BseJI GATNNNNATC 2 cut(s) 644, 1742
BseLI CCNNNNNNNGG 8 cut(s) 40, 77, 139, 163, 764, 1691, 1968, 2252
BseMI GCAATG 2 cut(s) 1242, 2726
BseMII CTCAG 8 cut(s) 347, 773, 1242, 1362, 2186, 2556, 2863, 2897
BseNI ACTGG 4 cut(s) 544, 849, 1729, 2190
BseRI GAGGAG 4 cut(s) 338, 1336, 1364, 2609
BseYI CCCAGC 2 cut(s) 1547, 2669
BsgI GTGCAG 3 cut(s) 2027, 2183, 2646
Bsh1236I CGCG 1 cut(s) 754
BshFI GGCC 7 cut(s) 56, 657, 757, 1420, 1937, 2356, 2854
BshNI GGYRCC 1 cut(s) 1837
BsiHKAI GWGCWC 1 cut(s) 2463
BsiHKCI CYCGRG 1 cut(s) 1997
BslFI GGGAC 2 cut(s) 1437, 2503
BslI CCNNNNNNNGG 8 cut(s) 40, 77, 139, 163, 764, 1691, 1968, 2252
BsmAI GTCTC 4 cut(s) 743, 852, 2473, 2736
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 2 cut(s) 1437, 2503
BsmI GAATGC 1 cut(s) 1099
BsnI GGCC 7 cut(s) 56, 657, 757, 1420, 1937, 2356, 2854
Bso31I GGTCTC 1 cut(s) 2736
BsoBI CYCGRG 1 cut(s) 1997
Bsp119I TTCGAA 2 cut(s) 491, 1810
Bsp1286I GDGCHC 1 cut(s) 2463
Bsp13I TCCGGA 1 cut(s) 2455
Bsp1407I TGTACA 1 cut(s) 2127
Bsp143I GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
Bsp1720I GCTNAGC 3 cut(s) 1371, 2231, 2732
BspANI GGCC 7 cut(s) 56, 657, 757, 1420, 1937, 2356, 2854
BspCNI CTCAG 8 cut(s) 346, 772, 1243, 1363, 2187, 2557, 2862, 2896
BspEI TCCGGA 1 cut(s) 2455
BspFNI CGCG 1 cut(s) 754
BspLI GGNNCC 7 cut(s) 131, 301, 454, 1325, 1720, 1839, 2720
BspPI GGATC 2 cut(s) 322, 1871
BspT104I TTCGAA 2 cut(s) 491, 1810
BspT107I GGYRCC 1 cut(s) 1837
BspTI CTTAAG 1 cut(s) 1655
BspTNI GGTCTC 1 cut(s) 2736
BsrBI CCGCTC 2 cut(s) 250, 2032
BsrDI GCAATG 2 cut(s) 1242, 2726
BsrFI RCCGGY 3 cut(s) 20, 692, 2652
BsrGI TGTACA 1 cut(s) 2127
BsrI ACTGG 4 cut(s) 544, 849, 1729, 2190
BssAI RCCGGY 3 cut(s) 20, 692, 2652
BssECI CCNNGG 7 cut(s) 138, 619, 1104, 1149, 1166, 1217, 2747
BssMI GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
BssNI GRCGYC 1 cut(s) 1838
BssT1I CCWWGG 5 cut(s) 619, 1104, 1149, 1166, 2747
Bst2UI CCWGG 4 cut(s) 140, 1218, 1271, 2204
Bst4CI ACNGT 9 cut(s) 7, 993, 1192, 1532, 1822, 1888, 2176, 2250, 2686
Bst6I CTCTTC 1 cut(s) 411
BstACI GRCGYC 1 cut(s) 1838
BstAFI CTTAAG 1 cut(s) 1655
BstAPI GCANNNNNTGC 1 cut(s) 2161
BstAUI TGTACA 1 cut(s) 2127
BstBAI YACGTR 2 cut(s) 1621, 1863
BstBI TTCGAA 2 cut(s) 491, 1810
BstC8I GCNNGC 1 cut(s) 2873
BstF5I GGATG 3 cut(s) 1489, 2596, 2646
BstFNI CGCG 1 cut(s) 754
BstH2I RGCGCY 1 cut(s) 1841
BstHHI GCGC 3 cut(s) 1306, 1840, 2391
BstKTI GATC 9 cut(s) 211, 330, 648, 1287, 1654, 1746, 1879, 2478, 2772
BstMAI GTCTC 4 cut(s) 743, 852, 2473, 2736
BstMBI GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
BstNI CCWGG 4 cut(s) 140, 1218, 1271, 2204
BstNSI RCATGY 3 cut(s) 2119, 2128, 2278
BstSCI CCNGG 7 cut(s) 138, 162, 1216, 1269, 1420, 1961, 2202
BstSFI CTRYAG 1 cut(s) 217
BstUI CGCG 1 cut(s) 754
BstV2I GAAGAC 2 cut(s) 84, 987
BstX2I RGATCY 2 cut(s) 327, 1284
BstXI CCANNNNNNTGG 1 cut(s) 1173
BstYI RGATCY 2 cut(s) 327, 1284
BsuRI GGCC 7 cut(s) 56, 657, 757, 1420, 1937, 2356, 2854
BtrI CACGTC 2 cut(s) 202, 1427
BtsCI GGATG 3 cut(s) 1489, 2596, 2646
BtsI GCAGTG 3 cut(s) 1321, 1654, 2138
BtsIMutI CAGTG 6 cut(s) 1197, 1321, 1654, 1722, 1884, 2138
Cac8I GCNNGC 1 cut(s) 2873
CaiI CAGNNNCTG 2 cut(s) 659, 2357
CfoI GCGC 3 cut(s) 1306, 1840, 2391
Cfr10I RCCGGY 3 cut(s) 20, 692, 2652
Cfr13I GGNCC 7 cut(s) 55, 154, 255, 300, 656, 1418, 2354
CseI GACGC 1 cut(s) 760
Csp6I GTAC 5 cut(s) 148, 1177, 1858, 2128, 2272
CspCI CAANNNNNGTGG 2 cut(s) 588, 623
CviAII CATG 9 cut(s) 67, 2116, 2125, 2275, 2285, 2305, 2535, 2542, 2561
CviQI GTAC 5 cut(s) 148, 1177, 1858, 2128, 2272
DinI GGCGCC 1 cut(s) 1839
DpnI GATC 9 cut(s) 210, 329, 647, 1286, 1653, 1745, 1878, 2477, 2771
DpnII GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
DraIII CACNNNGTG 1 cut(s) 2711
EaeI YGGCCR 1 cut(s) 1935
Eam1104I CTCTTC 1 cut(s) 411
EarI CTCTTC 1 cut(s) 411
EciI GGCGGA 3 cut(s) 699, 711, 717
Ecl136II GAGCTC 1 cut(s) 2461
Eco130I CCWWGG 5 cut(s) 619, 1104, 1149, 1166, 2747
Eco24I GRGCYC 1 cut(s) 2463
Eco31I GGTCTC 1 cut(s) 2736
Eco47I GGWCC 3 cut(s) 154, 255, 300
Eco53kI GAGCTC 1 cut(s) 2461
Eco57I CTGAAG 6 cut(s) 494, 764, 915, 1110, 2314, 2884
Eco72I CACGTG 2 cut(s) 1621, 1863
Eco88I CYCGRG 1 cut(s) 1997
EcoICRI GAGCTC 1 cut(s) 2461
EcoO109I RGGNCCY 3 cut(s) 154, 656, 2354
EcoRI GAATTC 1 cut(s) 1584
EcoRII CCWGG 4 cut(s) 138, 1216, 1269, 2202
EcoT14I CCWWGG 5 cut(s) 619, 1104, 1149, 1166, 2747
EcoT22I ATGCAT 1 cut(s) 2157
EcoT38I GRGCYC 1 cut(s) 2463
EgeI GGCGCC 1 cut(s) 1839
EheI GGCGCC 1 cut(s) 1839
ErhI CCWWGG 5 cut(s) 619, 1104, 1149, 1166, 2747
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 9 cut(s) 70, 2119, 2128, 2278, 2288, 2308, 2538, 2545, 2564
FalI AAGNNNNNCTT 6 cut(s) 18, 50, 170, 202, 1142, 1174
FaqI GGGAC 2 cut(s) 1437, 2503
FatI CATG 9 cut(s) 66, 2115, 2124, 2274, 2284, 2304, 2534, 2541, 2560
FauI CCCGC 1 cut(s) 2528
FauNDI CATATG 2 cut(s) 2295, 2487
FbaI TGATCA 1 cut(s) 645
FblI GTMKAC 1 cut(s) 2013
FokI GGATG 3 cut(s) 1496, 2603, 2653
FriOI GRGCYC 1 cut(s) 2463
FspBI CTAG 7 cut(s) 182, 855, 1296, 1581, 1767, 2336, 2916
FspI TGCGCA 2 cut(s) 1305, 2390
GlaI GCGC 3 cut(s) 1305, 1839, 2390
GsaI CCCAGC 2 cut(s) 1551, 2673
GsuI CTGGAG 2 cut(s) 1968, 2758
HaeII RGCGCY 1 cut(s) 1841
HaeIII GGCC 7 cut(s) 56, 657, 757, 1420, 1937, 2356, 2854
HgaI GACGC 1 cut(s) 760
HhaI GCGC 3 cut(s) 1306, 1840, 2391
Hin1I GRCGYC 1 cut(s) 1838
Hin1II CATG 9 cut(s) 70, 2119, 2128, 2278, 2288, 2308, 2538, 2545, 2564
Hin6I GCGC 3 cut(s) 1304, 1838, 2389
HinP1I GCGC 3 cut(s) 1304, 1838, 2389
HincII GTYRAC 3 cut(s) 235, 729, 1566
HindII GTYRAC 3 cut(s) 235, 729, 1566
HindIII AAGCTT 2 cut(s) 395, 1092
HphI GGTGA 7 cut(s) 332, 782, 946, 1528, 2081, 2705, 2723
Hpy166II GTNNAC 8 cut(s) 235, 729, 1156, 1566, 1860, 1992, 2014, 2130
Hpy8I GTNNAC 8 cut(s) 235, 729, 1156, 1566, 1860, 1992, 2014, 2130
Hpy99I CGWCG 2 cut(s) 107, 412
HpyCH4III ACNGT 9 cut(s) 7, 993, 1192, 1532, 1822, 1888, 2176, 2250, 2686
HpyCH4IV ACGT 4 cut(s) 201, 1426, 1620, 1862
HpySE526I ACGT 4 cut(s) 201, 1426, 1620, 1862
Hsp92I GRCGYC 1 cut(s) 1838
Hsp92II CATG 9 cut(s) 70, 2119, 2128, 2278, 2288, 2308, 2538, 2545, 2564
HspAI GCGC 3 cut(s) 1304, 1838, 2389
KasI GGCGCC 1 cut(s) 1837
Kpn2I TCCGGA 1 cut(s) 2455
Ksp22I TGATCA 1 cut(s) 645
Kzo9I GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
LmnI GCTCC 8 cut(s) 135, 686, 1323, 1718, 2301, 2313, 2458, 2868
LweI GCATC 4 cut(s) 1762, 2028, 2142, 2376
MaeI CTAG 7 cut(s) 182, 855, 1296, 1581, 1767, 2336, 2916
MaeII ACGT 4 cut(s) 201, 1426, 1620, 1862
MaeIII GTNAC 6 cut(s) 260, 534, 1186, 1427, 1891, 2111
MalI GATC 9 cut(s) 210, 329, 647, 1286, 1653, 1745, 1878, 2477, 2771
MbiI CCGCTC 2 cut(s) 250, 2032
MboI GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
MfeI CAATTG 1 cut(s) 1467
MflI RGATCY 2 cut(s) 327, 1284
MhlI GDGCHC 1 cut(s) 2463
MluCI AATT 8 cut(s) 113, 271, 910, 1120, 1467, 1584, 1912, 2323
Mly113I GGCGCC 1 cut(s) 1838
MlyI GAGTC 7 cut(s) 782, 1562, 1959, 2009, 2019, 2282, 2626
MmeI TCCRAC 3 cut(s) 489, 2568, 2600
Mph1103I ATGCAT 1 cut(s) 2157
MroI TCCGGA 1 cut(s) 2455
MseI TTAA 4 cut(s) 849, 1143, 1656, 2514
MslI CAYNNNNRTG 3 cut(s) 1692, 1694, 1901
MspA1I CMGCKG 1 cut(s) 1547
MspCI CTTAAG 1 cut(s) 1655
MspR9I CCNGG 7 cut(s) 140, 164, 1218, 1271, 1422, 1963, 2204
MunI CAATTG 1 cut(s) 1467
Mva1269I GAATGC 1 cut(s) 1099
MvaI CCWGG 4 cut(s) 140, 1218, 1271, 2204
MvnI CGCG 1 cut(s) 754
NarI GGCGCC 1 cut(s) 1838
NciI CCSGG 3 cut(s) 164, 1422, 1963
NdeI CATATG 2 cut(s) 2295, 2487
NdeII GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
NlaIII CATG 9 cut(s) 70, 2119, 2128, 2278, 2288, 2308, 2538, 2545, 2564
NlaIV GGNNCC 7 cut(s) 131, 301, 454, 1325, 1720, 1839, 2720
NmeAIII GCCGAG 2 cut(s) 744, 2883
NmuCI GTSAC 2 cut(s) 534, 1427
NsbI TGCGCA 2 cut(s) 1305, 2390
NsiI ATGCAT 1 cut(s) 2157
NspI RCATGY 3 cut(s) 2119, 2128, 2278
NspV TTCGAA 2 cut(s) 491, 1810
OliI CACNNNNGTG 1 cut(s) 1692
PaeR7I CTCGAG 1 cut(s) 1997
PciI ACATGT 2 cut(s) 2115, 2124
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 2612
PctI GAATGC 1 cut(s) 1099
PfeI GAWTC 9 cut(s) 640, 1279, 1333, 1958, 1981, 2179, 2603, 2677, 2862
PflFI GACNNNGTC 1 cut(s) 2009
PfoI TCCNGGA 1 cut(s) 1961
PleI GAGTC 7 cut(s) 781, 1561, 1958, 2008, 2018, 2282, 2625
PluTI GGCGCC 1 cut(s) 1841
PmaCI CACGTG 2 cut(s) 1621, 1863
PmlI CACGTG 2 cut(s) 1621, 1863
PpsI GAGTC 7 cut(s) 781, 1561, 1958, 2008, 2018, 2282, 2625
Ppu21I YACGTR 2 cut(s) 1621, 1863
PpuMI RGGWCCY 1 cut(s) 154
PscI ACATGT 2 cut(s) 2115, 2124
Psp124BI GAGCTC 1 cut(s) 2463
Psp5II RGGWCCY 1 cut(s) 154
Psp6I CCWGG 4 cut(s) 138, 1216, 1269, 2202
PspCI CACGTG 2 cut(s) 1621, 1863
PspFI CCCAGC 2 cut(s) 1547, 2669
PspGI CCWGG 4 cut(s) 138, 1216, 1269, 2202
PspN4I GGNNCC 7 cut(s) 131, 301, 454, 1325, 1720, 1839, 2720
PspPI GGNCC 7 cut(s) 55, 154, 255, 300, 656, 1418, 2354
PspPPI RGGWCCY 1 cut(s) 154
PspXI VCTCGAGB 1 cut(s) 1997
PsrI GAACNNNNNNTAC 2 cut(s) 1841, 1873
PstNI CAGNNNCTG 2 cut(s) 659, 2357
PsuI RGATCY 2 cut(s) 327, 1284
PsyI GACNNNGTC 1 cut(s) 2009
PvuII CAGCTG 1 cut(s) 1547
RsaI GTAC 5 cut(s) 149, 1178, 1859, 2129, 2273
RsaNI GTAC 5 cut(s) 148, 1177, 1858, 2128, 2272
RseI CAYNNNNRTG 3 cut(s) 1692, 1694, 1901
SacI GAGCTC 1 cut(s) 2463
SaqAI TTAA 4 cut(s) 849, 1143, 1656, 2514
Sau3AI GATC 9 cut(s) 208, 327, 645, 1284, 1651, 1743, 1876, 2475, 2769
Sau96I GGNCC 7 cut(s) 55, 154, 255, 300, 656, 1418, 2354
SchI GAGTC 7 cut(s) 782, 1562, 1959, 2009, 2019, 2282, 2626
ScrFI CCNGG 7 cut(s) 140, 164, 1218, 1271, 1422, 1963, 2204
SduI GDGCHC 1 cut(s) 2463
SfaNI GCATC 4 cut(s) 1762, 2028, 2142, 2376
SfcI CTRYAG 1 cut(s) 217
SfoI GGCGCC 1 cut(s) 1839
Sfr274I CTCGAG 1 cut(s) 1997
SfuI TTCGAA 2 cut(s) 491, 1810
SinI GGWCC 3 cut(s) 154, 255, 300
SlaI CTCGAG 1 cut(s) 1997
SmiMI CAYNNNNRTG 3 cut(s) 1692, 1694, 1901
SmlI CTYRAG 5 cut(s) 1180, 1203, 1288, 1655, 1997
SmoI CTYRAG 5 cut(s) 1180, 1203, 1288, 1655, 1997
Sse9I AATT 8 cut(s) 113, 271, 910, 1120, 1467, 1584, 1912, 2323
SspDI GGCGCC 1 cut(s) 1837
SspI AATATT 2 cut(s) 307, 830
SspMI CTAG 7 cut(s) 182, 855, 1296, 1581, 1767, 2336, 2916
SstI GAGCTC 1 cut(s) 2463
StyD4I CCNGG 7 cut(s) 138, 162, 1216, 1269, 1420, 1961, 2202
StyI CCWWGG 5 cut(s) 619, 1104, 1149, 1166, 2747
TaaI ACNGT 9 cut(s) 7, 993, 1192, 1532, 1822, 1888, 2176, 2250, 2686
TaiI ACGT 4 cut(s) 204, 1429, 1623, 1865
TaqII GACCGA 1 cut(s) 2022
TasI AATT 8 cut(s) 113, 271, 910, 1120, 1467, 1584, 1912, 2323
TatI WGTACW 4 cut(s) 147, 1857, 2127, 2271
TauI GCSGC 5 cut(s) 56, 681, 684, 757, 2857
TfiI GAWTC 9 cut(s) 640, 1279, 1333, 1958, 1981, 2179, 2603, 2677, 2862
Tru1I TTAA 4 cut(s) 849, 1143, 1656, 2514
Tru9I TTAA 4 cut(s) 849, 1143, 1656, 2514
TscAI CASTG 6 cut(s) 1197, 1321, 1654, 1729, 1891, 2145
TseFI GTSAC 2 cut(s) 534, 1427
Tsp45I GTSAC 2 cut(s) 534, 1427
TspDTI ATGAA 6 cut(s) 647, 1577, 1754, 2066, 2225, 2530
TspGWI ACGGA 3 cut(s) 746, 1496, 1943
TspRI CASTG 6 cut(s) 1197, 1321, 1654, 1729, 1891, 2145
Tth111I GACNNNGTC 1 cut(s) 2009
Vha464I CTTAAG 1 cut(s) 1655
VpaK11BI GGWCC 3 cut(s) 154, 255, 300
XapI RAATTY 4 cut(s) 113, 271, 1120, 1584
XbaI TCTAGA 1 cut(s) 1580
XceI RCATGY 3 cut(s) 2119, 2128, 2278
XhoI CTCGAG 1 cut(s) 1997
XmiI GTMKAC 1 cut(s) 2013
XspI CTAG 7 cut(s) 182, 855, 1296, 1581, 1767, 2336, 2916
Zsp2I ATGCAT 1 cut(s) 2157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.