Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0015165

Physical Location & Seq

Genomic Coordinates Forward (+)

31377060 .. 31380149

Gene Structure 3090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1185200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3090 bp

ATGACCGTGAGCACCACCGCCAAAGAAAAGCTGGTGGTGGAGGTGGTGGCGGCGCACAACCTCATGCCGAAAGACGGCGAAGGCTCCTCCTCCCCCTTCGTAGAAATCGAGTTCGAGAACCAGCGCCTCCGAACCCAAGTCAAATACAAAGACCTCAACCCTATCTGGAACGAAAAGCTCGTCTTCCACGTCAAAGACGTCGCCGACCTTCCCTACAGAACCATCGAAGCCAACGTTTTCAACGAGCGGCGGTCCAGCAACAGCAGGAATTTCCTCGGAAAAGTCCGCGTTTCGGGCTCCAACATTGGGAAAGAGGGCGAAGAGGTCCCCCAGCTTTTCACTCTCGACAAAAGGAGCTTATTTTCTCACATCAGAGGAGAAATCAGCCTGAAGCTCTACCTTTCCACGAGGGAGGAGGTCAAGGAATCTGGGGGTAATGGAAATGGAAATGGAACAGTCTCCTCCTCCTCTCTTTCTGCATCTACTGTCTCGGGTTCCGGGTTTTCGAAGAAGAAGAACAAGCTTCAGGGGGGGAACTCGGCTATGGCGGTGAATCAGCAGCTGGTGCAGGAATCGAAGCCGACTCAGCAGAACCAGAACCACAACGGCGGGTTCAAGAATCAGGAGCAGCAAAATGCAGGTGAGATGATGATGATAAATAAGCCTGTTTTGATTAATCCAGGGCCTGGGATTGGTGTCTCCGCCGCCGGCGACAGAGGGACTGGCGGTGGTGGGGGTGGGAGTGTGTACTCAAATGGGTTGGGCGAGTTTTCGCTTAAGGAGACTCGGCCGCAGCTCGGCGGTGAGTCTATGAAGAAGGACAAAACTAGCTCGACTTATGACCTTGTTGAGCAAATGCAGTATCTGTATGTGAGGGTTGTGAAAGCGAAAGATGTCTCGTTGTTTGGCGTCGGGGATTTGGTGGCGGAAGTGAAGTTAGGGAACTACAGAGGGGTTACTAAGAGGGTTGGTTTGAACAATGTTGAGTGGGGTCAGGTTTTTGCCTTTTCGAAGGAATGCATACAGTCATCAATGGTGGAGATTTTTGTGAAAGAGAGCAACAAAGATGATTTCTTGGGCCGTGTTTGGTTTGATTTGAATGAGGTTCCGAGGAGGGTTCCCCCGGATAGTCAGTTGGCTCCGCAGTGGTACAGAATGGAGGATAAGAAGGGGGACAAGTCGAAAGCAGGAGAGGTTATGCTTTCAATTTGGTTTGGGACTCAGGCTGATGAGGCATTTGCCGAGTCTTGGCATTCGAAGGCTGCCAATGTGAATTTTGACGGGCTTTGTTCGATAAAGTCCAAGGTTTATTTGTCCCCAAGGCTGTGGTATCTTAGAGTGTCGATTATCGAAGCTCAAGACATTGTCCCTGGCGAGAAGGGGTCTACAATGATGAGGTTTCCTGAGCTTTCCGCGAAAGTTCAGGTGGGAAACCAGGTTTTGAGGACTAGAAGTGCACAGCCTAGTAGCGTGAGGAGCCTCTCTAATCCTTTTTGGAATGAGGAGATGATGTTTGTGGTGGCTGAGCCAATAGAGGACTACTTATTGGTTGCTATTGAGGATAGGGTTGGGCCGGGGCGTGATGAGGTGGTGGGAAGAGTGCTACTTCCGGTGCAAGCAATAGAAAGGCGAACAGATGAAAAGCCCGTCGTTTCAAGATGGTTCAACCTTGACAACCACCATTTCGGCAATGGAGGAGCAGCAGAGTCCAAAATGATGACAAGGTTTGGTTCTAGAATCCATCTCCGGGTTTCACTTGATGGTGGTTATCATGTGCTAGATGAGGCCACAATGTACAGCAGTGATCTTAAGCCGACTGACAAGCGGCTGTGGAAGTCTCACATTGGTGTGCTTGAGATGGGGATTTTGGGCGCAACGGGGCTTATGCCAATGAAAATAAAAGAAGGCAAAGGCGGGTGTAGTGATGCCTATTGTGTTGCAAAGTATGGCCAAAAATGGGTTCGAACTCGCACCGTTGTAGAAAGCTTGTCCCCGAAATGGAACGAGCAGTACACTTGGGAGGTGTATGATCCGTGCACAGTTGTCACAATTGGGGTGTTTGATAACTCCCGGATTGGCAAGAACTTGGCCAACAATCCAGGAGCTCGTGATTTGCGTATTGGGAAGGTTAGAATTCGCTTGTCTACGCTGGAATCTGATCGAGTTTATACTCATTCGTATCCCCTCATGATGCTGCACACTTCAGGGGTCAAGAAAATGGGTGAGCTTCATCTGGCTATTCGGTTTTCGTGTGCCAATATGGCTAACATACTGCACATGTACACAATGCCGCTGCTTCCAAAGATGCATTTTGTGAACCCTTTGAGTGTGAATCAGTTGGAGACTTTGAGGTACCAAGCGATGAATGTGGTGGCCTCTAGGCTTAGCCGGGCAGAGCCGCCATTGGGTAGAGAGGTGGTTGAATACATGCTTGATCACGATTCCCATATGTGGAGCATGAGAAGGAGCAAAGCCAACTTCTTTCGACTAATGAATGTTGTTTCAGGACTTGTTGCTATGGGAAGATGGGTGGAGTTGATCCGTAGTTGGAACCGCCCGGTTATCTCAGCTTTAGTTGTTGCACTTTTCCTCTTGCTGGTTGCATATCCAGACCTCATCCTCCCAATGATTTTGCTCTACATGGCCTTAGTGGGACTTTGGCGTTATAGGTCTAGACCGCGCCAACCACCCCACATGGACACTCGCCTTTCCCACGCTGAGAGTGTCTATGCTGATGAATTGGATGAGGAATTCGATTCTTTTCCAACAAGCCGGAGCGCTGAGGTTGTTCGAATGAGGTATGACCGGCTAAGGAGCGTGGCAGGGAGGATTCAAACTGTTGTTGGTGACATGGCTTCGCAAGGCGAGCGATTCCAAGCACTCCTGAGCTGGAGAGACCCGAGAGCCACATTCTTGTTTGTGATATTCTGCTTGATTGCCACTTTTGTGTTGTATGCAGTGCCAATTAAGGCTGTGGTGGTTCTGCTGGGATTGTATGTGCTGCGACCGCCAAGGTTCAGGAGCAAGCTGCCTTCTCAGCCTTTGAATTTCTTCAGGAGGCTGCCCACCAGGGCTGATAGCTTGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1030

Amino Acids

115.63

Weight (kDa)

9.4

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	10 - 109	3.6e-21	C2 domain
C2	PF00168	288 - 385	5.3e-07	C2 domain
C2	PF00168	443 - 557	1.1e-12	C2 domain
C2	PF00168	616 - 729	1.9e-19	C2 domain
PRT_C	PF08372	874 - 1029	1.2e-76	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04150
fragaria_vesca	FvH4_2g20170
malus_domestica	MD05G1185200.v1.1
prunus_persica	Prupe.8G211500_v2.0.a1
pyrus_communis	pycom05g16990
rosa_chinensis	RchiOBHm_Chr6g0285931
rosa_laevigata	RLG00000012596
rosa_multiflora	Rmu_co8487333.1_g000001 Rmu_sc0004808.1_g000007
rosa_roxburghii	Rroxscaffold_7G00182590
rosa_rugosa	Rorug06G0177500
rosa_samantha	Rh6AG289600 Rh6BG291500 Rh6CG292400 Rh6DG284500
rosa_wichuraiana	Rw6G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	629
AatII	GACGTC	1 cut(s)	201
Acc36I	ACCTGC	1 cut(s)	629
Acc65I	GGTACC	1 cut(s)	2352
AccB1I	GGYRCC	1 cut(s)	2352
AccB7I	CCANNNNNTGG	1 cut(s)	686
AccBSI	CCGCTC	1 cut(s)	247
AccI	GTMKAC	2 cut(s)	1385, 2144
AccII	CGCG	3 cut(s)	288, 1415, 2680
AclI	AACGTT	1 cut(s)	234
AclWI	GGATC	2 cut(s)	2024, 2533
AcoI	YGGCCR	3 cut(s)	788, 1948, 2088
AcsI	RAATTY	5 cut(s)	268, 1273, 2133, 2750, 3046
AcuI	CTGAAG	4 cut(s)	410, 509, 2187, 3037
AcyI	GRCGYC	2 cut(s)	198, 909
AfaI	GTAC	6 cut(s)	749, 1151, 1796, 2012, 2282, 2354
AfeI	AGCGCT	1 cut(s)	2779
AflII	CTTAAG	2 cut(s)	776, 1808
AflIII	ACRYGT	1 cut(s)	2277
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	6 cut(s)	679, 685, 1369, 1434, 2098, 3068
AjuI	GAANNNNNNNTTGG	2 cut(s)	1944, 1976
AleI	CACNNNNGTG	2 cut(s)	1845, 2945
Alw21I	GWGCWC	4 cut(s)	14, 1459, 2039, 2107
Alw26I	GTCTC	8 cut(s)	463, 493, 703, 776, 901, 1842, 2336, 2889
Alw44I	GTGCAC	2 cut(s)	1455, 2035
AlwI	GGATC	2 cut(s)	2024, 2533
AlwNI	CAGNNNCTG	3 cut(s)	562, 686, 865
Ama87I	CYCGRG	2 cut(s)	490, 2899
Aor51HI	AGCGCT	1 cut(s)	2779
AoxI	GGCC	9 cut(s)	683, 788, 1078, 1571, 1785, 1948, 2088, 2373, 2643
ApaLI	GTGCAC	2 cut(s)	1455, 2035
ApoI	RAATTY	5 cut(s)	268, 1273, 2133, 2750, 3046
ArsI	GACNNNNNNTTYG	2 cut(s)	165, 197
AseI	ATTAAT	1 cut(s)	675
Asp700I	GAANNNNTTC	1 cut(s)	3050
Asp718I	GGTACC	1 cut(s)	2352
AspLEI	GCGC	5 cut(s)	55, 126, 1874, 2682, 2780
AspS9I	GGNCC	5 cut(s)	252, 325, 683, 1078, 1571
AsuC2I	CCSGG	7 cut(s)	499, 1124, 1575, 1748, 2071, 2390, 2558
AsuHPI	GGTGA	5 cut(s)	562, 653, 815, 2234, 2858
AsuII	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
AvaI	CYCGRG	2 cut(s)	490, 2899
AvaII	GGWCC	2 cut(s)	252, 325
BaeGI	GKGCMC	2 cut(s)	1459, 2039
BalI	TGGCCA	2 cut(s)	1950, 2090
BanI	GGYRCC	1 cut(s)	2352
BanII	GRGCYC	2 cut(s)	299, 2107
BauI	CACGAG	2 cut(s)	406, 2106
BbsI	GAAGAC	1 cut(s)	175
Bbv12I	GWGCWC	4 cut(s)	14, 1459, 2039, 2107
BbvCI	CCTCAGC	1 cut(s)	2781
BccI	CCATC	6 cut(s)	230, 1653, 1749, 1754, 1852, 2520
BceAI	ACGGC	3 cut(s)	91, 622, 1065
BciT130I	CCWGG	6 cut(s)	681, 687, 1371, 1436, 2100, 3070
BciVI	GTATCC	1 cut(s)	2190
BclI	TGATCA	1 cut(s)	2434
BcnI	CCSGG	7 cut(s)	499, 1124, 1575, 1748, 2071, 2390, 2558
BcoDI	GTCTC	8 cut(s)	463, 493, 703, 776, 901, 1842, 2336, 2889
BfaI	CTAG	7 cut(s)	828, 1449, 1464, 1734, 1778, 2379, 2673
BfmI	CTRYAG	2 cut(s)	214, 946
BfoI	RGCGCY	2 cut(s)	127, 2781
BfrI	CTTAAG	2 cut(s)	776, 1808
BfuAI	ACCTGC	1 cut(s)	629
BfuI	GTATCC	1 cut(s)	2190
BglI	GCCNNNNNGGC	1 cut(s)	2261
BlpI	GCTNAGC	2 cut(s)	1524, 2384
Bme18I	GGWCC	2 cut(s)	252, 325
BmeT110I	CYCGRG	2 cut(s)	490, 2899
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	5 cut(s)	252, 325, 683, 1078, 1571
BmsI	GCATC	4 cut(s)	488, 1915, 2181, 2295
BpiI	GAAGAC	1 cut(s)	175
BpmI	CTGGAG	1 cut(s)	2911
Bpu10I	CCTNAGC	4 cut(s)	1404, 2781, 2810, 2885
Bpu1102I	GCTNAGC	2 cut(s)	1524, 2384
Bpu14I	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
BpuEI	CTTGAG	2 cut(s)	1341, 1874
BpuMI	CCSGG	7 cut(s)	499, 1124, 1575, 1748, 2071, 2390, 2558
BsaHI	GRCGYC	2 cut(s)	198, 909
BsaI	GGTCTC	1 cut(s)	2889
BsaWI	WCCGGW	1 cut(s)	1609
BsaXI	ACNNNNNCTCC	2 cut(s)	1496, 1526
Bse118I	RCCGGY	2 cut(s)	707, 2805
Bse1I	ACTGG	1 cut(s)	727
Bse3DI	GCAATG	1 cut(s)	1696
BseBI	CCWGG	6 cut(s)	681, 687, 1371, 1436, 2100, 3070
BseGI	GGATG	2 cut(s)	2616, 2749
BseMI	GCAATG	1 cut(s)	1696
BseMII	CTCAG	9 cut(s)	599, 1235, 1395, 1515, 2580, 2709, 2772, 2876, 3050
BseNI	ACTGG	1 cut(s)	727
BseSI	GKGCMC	2 cut(s)	1459, 2039
BseX3I	CGGCCG	1 cut(s)	788
BseYI	CCCAGC	2 cut(s)	330, 2986
BsgI	GTGCAG	3 cut(s)	587, 2180, 2258
Bsh1236I	CGCG	3 cut(s)	288, 1415, 2680
Bsh1285I	CGRYCG	2 cut(s)	791, 3008
BshFI	GGCC	9 cut(s)	685, 790, 1080, 1573, 1787, 1950, 2090, 2375, 2645
BshNI	GGYRCC	1 cut(s)	2352
BsiEI	CGRYCG	2 cut(s)	791, 3008
BsiHKAI	GWGCWC	4 cut(s)	14, 1459, 2039, 2107
BsiHKCI	CYCGRG	2 cut(s)	490, 2899
BslFI	GGGAC	8 cut(s)	311, 733, 1187, 1231, 1300, 1352, 1975, 2667
BsmAI	GTCTC	8 cut(s)	463, 493, 703, 776, 901, 1842, 2336, 2889
BsmFI	GGGAC	8 cut(s)	311, 733, 1187, 1231, 1300, 1352, 1975, 2667
BsmI	GAATGC	2 cut(s)	1022, 1252
BsnI	GGCC	9 cut(s)	685, 790, 1080, 1573, 1787, 1950, 2090, 2375, 2645
Bso31I	GGTCTC	1 cut(s)	2889
BsoBI	CYCGRG	2 cut(s)	490, 2899
Bsp119I	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
Bsp1286I	GDGCHC	5 cut(s)	14, 299, 1459, 2039, 2107
Bsp1407I	TGTACA	2 cut(s)	1794, 2280
Bsp143I	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
Bsp1720I	GCTNAGC	2 cut(s)	1524, 2384
BspANI	GGCC	9 cut(s)	685, 790, 1080, 1573, 1787, 1950, 2090, 2375, 2645
BspCNI	CTCAG	9 cut(s)	598, 1234, 1396, 1516, 2579, 2710, 2773, 2877, 3049
BspFNI	CGCG	3 cut(s)	288, 1415, 2680
BspHI	TCATGA	1 cut(s)	2187
BspMI	ACCTGC	1 cut(s)	629
BspPI	GGATC	2 cut(s)	2024, 2533
BspT104I	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
BspT107I	GGYRCC	1 cut(s)	2352
BspTI	CTTAAG	2 cut(s)	776, 1808
BspTNI	GGTCTC	1 cut(s)	2889
BsrBI	CCGCTC	1 cut(s)	247
BsrDI	GCAATG	1 cut(s)	1696
BsrFI	RCCGGY	2 cut(s)	707, 2805
BsrGI	TGTACA	2 cut(s)	1794, 2280
BsrI	ACTGG	1 cut(s)	727
BssAI	RCCGGY	2 cut(s)	707, 2805
BssMI	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
BssNI	GRCGYC	2 cut(s)	198, 909
BssSI	CACGAG	2 cut(s)	406, 2106
BssT1I	CCWWGG	3 cut(s)	1302, 1319, 3011
Bst2BI	CACGAG	2 cut(s)	406, 2106
Bst2UI	CCWGG	6 cut(s)	681, 687, 1371, 1436, 2100, 3070
Bst4CI	ACNGT	7 cut(s)	7, 457, 487, 1026, 1975, 2041, 2839
Bst6I	CTCTTC	2 cut(s)	315, 1591
BstACI	GRCGYC	2 cut(s)	198, 909
BstAFI	CTTAAG	2 cut(s)	776, 1808
BstAPI	GCANNNNNTGC	1 cut(s)	565
BstAUI	TGTACA	2 cut(s)	1794, 2280
BstBI	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
BstC8I	GCNNGC	4 cut(s)	709, 1617, 2867, 3026
BstF5I	GGATG	2 cut(s)	2616, 2749
BstFNI	CGCG	3 cut(s)	288, 1415, 2680
BstH2I	RGCGCY	2 cut(s)	127, 2781
BstHHI	GCGC	5 cut(s)	55, 126, 1874, 2682, 2780
BstKTI	GATC	5 cut(s)	1807, 2032, 2161, 2437, 2541
BstMAI	GTCTC	8 cut(s)	463, 493, 703, 776, 901, 1842, 2336, 2889
BstMBI	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
BstMCI	CGRYCG	2 cut(s)	791, 3008
BstMWI	GCNNNNNNNGC	9 cut(s)	294, 565, 586, 1232, 1476, 2261, 2866, 3007, 3037
BstNI	CCWGG	6 cut(s)	681, 687, 1371, 1436, 2100, 3070
BstNSI	RCATGY	2 cut(s)	2281, 2431
BstSFI	CTRYAG	2 cut(s)	214, 946
BstSLI	GKGCMC	2 cut(s)	1459, 2039
BstUI	CGCG	3 cut(s)	288, 1415, 2680
BstV2I	GAAGAC	1 cut(s)	175
BstXI	CCANNNNNNTGG	1 cut(s)	1326
BstZI	CGGCCG	1 cut(s)	788
BsuI	GTATCC	1 cut(s)	2190
BsuRI	GGCC	9 cut(s)	685, 790, 1080, 1573, 1787, 1950, 2090, 2375, 2645
BtgZI	GCGATG	1 cut(s)	2375
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	2 cut(s)	2616, 2749
BtsI	GCAGTG	3 cut(s)	1151, 1807, 2964
BtsIMutI	CAGTG	3 cut(s)	1151, 1807, 2964
BveI	ACCTGC	1 cut(s)	629
Cac8I	GCNNGC	4 cut(s)	709, 1617, 2867, 3026
CaiI	CAGNNNCTG	3 cut(s)	562, 686, 865
CciI	TCATGA	1 cut(s)	2187
CfoI	GCGC	5 cut(s)	55, 126, 1874, 2682, 2780
Cfr10I	RCCGGY	2 cut(s)	707, 2805
Cfr13I	GGNCC	5 cut(s)	252, 325, 683, 1078, 1571
CseI	GACGC	1 cut(s)	898
CsiI	ACCWGGT	1 cut(s)	1434
Csp6I	GTAC	6 cut(s)	748, 1150, 1795, 2011, 2281, 2353
CviAII	CATG	9 cut(s)	64, 1772, 2188, 2278, 2428, 2458, 2641, 2695, 2851
CviQI	GTAC	6 cut(s)	748, 1150, 1795, 2011, 2281, 2353
DpnI	GATC	5 cut(s)	1806, 2031, 2160, 2436, 2540
DpnII	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
EaeI	YGGCCR	3 cut(s)	788, 1948, 2088
EagI	CGGCCG	1 cut(s)	788
Eam1104I	CTCTTC	2 cut(s)	315, 1591
EarI	CTCTTC	2 cut(s)	315, 1591
EciI	GGCGGA	2 cut(s)	691, 941
Ecl136II	GAGCTC	1 cut(s)	2105
EclXI	CGGCCG	1 cut(s)	788
Eco130I	CCWWGG	3 cut(s)	1302, 1319, 3011
Eco24I	GRGCYC	2 cut(s)	299, 2107
Eco31I	GGTCTC	1 cut(s)	2889
Eco47I	GGWCC	2 cut(s)	252, 325
Eco47III	AGCGCT	1 cut(s)	2779
Eco52I	CGGCCG	1 cut(s)	788
Eco53kI	GAGCTC	1 cut(s)	2105
Eco57I	CTGAAG	4 cut(s)	410, 509, 2187, 3037
Eco88I	CYCGRG	2 cut(s)	490, 2899
EcoICRI	GAGCTC	1 cut(s)	2105
EcoO109I	RGGNCCY	2 cut(s)	325, 683
EcoRI	GAATTC	2 cut(s)	2133, 2750
EcoRII	CCWGG	6 cut(s)	679, 685, 1369, 1434, 2098, 3068
EcoT14I	CCWWGG	3 cut(s)	1302, 1319, 3011
EcoT22I	ATGCAT	2 cut(s)	1022, 2310
EcoT38I	GRGCYC	2 cut(s)	299, 2107
ErhI	CCWWGG	3 cut(s)	1302, 1319, 3011
FaeI	CATG	9 cut(s)	67, 1775, 2191, 2281, 2431, 2461, 2644, 2698, 2854
FalI	AAGNNNNNCTT	2 cut(s)	167, 199
FaqI	GGGAC	8 cut(s)	311, 733, 1187, 1231, 1300, 1352, 1975, 2667
FatI	CATG	9 cut(s)	63, 1771, 2187, 2277, 2427, 2457, 2640, 2694, 2850
FauI	CCCGC	2 cut(s)	602, 1907
FauNDI	CATATG	1 cut(s)	2448
FbaI	TGATCA	1 cut(s)	2434
FblI	GTMKAC	2 cut(s)	1385, 2144
FokI	GGATG	2 cut(s)	2603, 2756
FriOI	GRGCYC	2 cut(s)	299, 2107
FspBI	CTAG	7 cut(s)	828, 1449, 1464, 1734, 1778, 2379, 2673
GlaI	GCGC	5 cut(s)	54, 125, 1873, 2681, 2779
GsaI	CCCAGC	2 cut(s)	334, 2990
GsuI	CTGGAG	1 cut(s)	2911
HaeII	RGCGCY	2 cut(s)	127, 2781
HaeIII	GGCC	9 cut(s)	685, 790, 1080, 1573, 1787, 1950, 2090, 2375, 2645
HgaI	GACGC	1 cut(s)	898
HhaI	GCGC	5 cut(s)	55, 126, 1874, 2682, 2780
Hin1I	GRCGYC	2 cut(s)	198, 909
Hin1II	CATG	9 cut(s)	67, 1775, 2191, 2281, 2431, 2461, 2644, 2698, 2854
Hin6I	GCGC	5 cut(s)	53, 124, 1872, 2680, 2778
HinP1I	GCGC	5 cut(s)	53, 124, 1872, 2680, 2778
HindIII	AAGCTT	2 cut(s)	521, 1984
HphI	GGTGA	5 cut(s)	562, 653, 815, 2234, 2858
Hpy166II	GTNNAC	8 cut(s)	748, 1386, 1457, 2013, 2037, 2145, 2283, 2317
Hpy188I	TCNGA	5 cut(s)	131, 278, 374, 1110, 2158
Hpy8I	GTNNAC	8 cut(s)	748, 1386, 1457, 2013, 2037, 2145, 2283, 2317
Hpy99I	CGWCG	3 cut(s)	203, 914, 1652
HpyCH4III	ACNGT	7 cut(s)	7, 457, 487, 1026, 1975, 2041, 2839
HpyCH4IV	ACGT	3 cut(s)	189, 198, 234
HpyF10VI	GCNNNNNNNGC	9 cut(s)	294, 565, 586, 1232, 1476, 2261, 2866, 3007, 3037
HpySE526I	ACGT	3 cut(s)	189, 198, 234
Hsp92I	GRCGYC	2 cut(s)	198, 909
Hsp92II	CATG	9 cut(s)	67, 1775, 2191, 2281, 2431, 2461, 2644, 2698, 2854
HspAI	GCGC	5 cut(s)	53, 124, 1872, 2680, 2778
KpnI	GGTACC	1 cut(s)	2356
KroI	GCCGGC	1 cut(s)	707
KroNI	GCCGGC	1 cut(s)	709
Ksp22I	TGATCA	1 cut(s)	2434
Kzo9I	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
LweI	GCATC	4 cut(s)	488, 1915, 2181, 2295
MabI	ACCWGGT	1 cut(s)	1434
MaeI	CTAG	7 cut(s)	828, 1449, 1464, 1734, 1778, 2379, 2673
MaeII	ACGT	3 cut(s)	189, 198, 234
MaeIII	GTNAC	3 cut(s)	955, 2044, 2846
MalI	GATC	5 cut(s)	1806, 2031, 2160, 2436, 2540
MbiI	CCGCTC	1 cut(s)	247
MboI	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
MboII	GAAGA	9 cut(s)	175, 332, 520, 523, 526, 826, 1608, 2535, 3043
MfeI	CAATTG	1 cut(s)	2049
MhlI	GDGCHC	5 cut(s)	14, 299, 1459, 2039, 2107
MlsI	TGGCCA	2 cut(s)	1950, 2090
MluCI	AATT	9 cut(s)	268, 1206, 1273, 2049, 2133, 2738, 2750, 2964, 3046
MluNI	TGGCCA	2 cut(s)	1950, 2090
MlyI	GAGTC	6 cut(s)	577, 778, 815, 1213, 1253, 1715
MmeI	TCCRAC	4 cut(s)	324, 2319, 2528, 2789
Mox20I	TGGCCA	2 cut(s)	1950, 2090
Mph1103I	ATGCAT	2 cut(s)	1022, 2310
MreI	CGCCGGCG	1 cut(s)	707
MroNI	GCCGGC	1 cut(s)	707
MroXI	GAANNNNTTC	1 cut(s)	3050
MscI	TGGCCA	2 cut(s)	1950, 2090
MseI	TTAA	4 cut(s)	675, 777, 1809, 2967
MslI	CAYNNNNRTG	3 cut(s)	1845, 1847, 2945
Msp20I	TGGCCA	2 cut(s)	1950, 2090
MspA1I	CMGCKG	2 cut(s)	562, 2293
MspCI	CTTAAG	2 cut(s)	776, 1808
MunI	CAATTG	1 cut(s)	2049
Mva1269I	GAATGC	2 cut(s)	1022, 1252
MvaI	CCWGG	6 cut(s)	681, 687, 1371, 1436, 2100, 3070
MvnI	CGCG	3 cut(s)	288, 1415, 2680
MwoI	GCNNNNNNNGC	9 cut(s)	294, 565, 586, 1232, 1476, 2261, 2866, 3007, 3037
NaeI	GCCGGC	1 cut(s)	709
NciI	CCSGG	7 cut(s)	499, 1124, 1575, 1748, 2071, 2390, 2558
NdeI	CATATG	1 cut(s)	2448
NdeII	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
NgoMIV	GCCGGC	1 cut(s)	707
NlaIII	CATG	9 cut(s)	67, 1775, 2191, 2281, 2431, 2461, 2644, 2698, 2854
NmeAIII	GCCGAG	4 cut(s)	518, 766, 777, 1267
NmuCI	GTSAC	2 cut(s)	2044, 2846
NsiI	ATGCAT	2 cut(s)	1022, 2310
NspI	RCATGY	2 cut(s)	2281, 2431
NspV	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
OliI	CACNNNNGTG	2 cut(s)	1845, 2945
PagI	TCATGA	1 cut(s)	2187
PaqCI	CACCTGC	1 cut(s)	629
PciI	ACATGT	1 cut(s)	2277
PcsI	WCGNNNNNNNCGW	7 cut(s)	105, 177, 186, 195, 231, 240, 2113
PctI	GAATGC	2 cut(s)	1022, 1252
PdiI	GCCGGC	1 cut(s)	709
PdmI	GAANNNNTTC	1 cut(s)	3050
PflFI	GACNNNGTC	1 cut(s)	1364
PflMI	CCANNNNNTGG	1 cut(s)	686
PfoI	TCCNGGA	2 cut(s)	2069, 2098
PleI	GAGTC	6 cut(s)	577, 778, 814, 1213, 1252, 1714
PpsI	GAGTC	6 cut(s)	577, 778, 814, 1213, 1252, 1714
PpuMI	RGGWCCY	1 cut(s)	325
PscI	ACATGT	1 cut(s)	2277
PshBI	ATTAAT	1 cut(s)	675
Psp124BI	GAGCTC	1 cut(s)	2107
Psp1406I	AACGTT	1 cut(s)	234
Psp5II	RGGWCCY	1 cut(s)	325
Psp6I	CCWGG	6 cut(s)	679, 685, 1369, 1434, 2098, 3068
PspFI	CCCAGC	2 cut(s)	330, 2986
PspGI	CCWGG	6 cut(s)	679, 685, 1369, 1434, 2098, 3068
PspPI	GGNCC	5 cut(s)	252, 325, 683, 1078, 1571
PspPPI	RGGWCCY	1 cut(s)	325
PsrI	GAACNNNNNNTAC	2 cut(s)	1994, 2026
PstNI	CAGNNNCTG	3 cut(s)	562, 686, 865
PsyI	GACNNNGTC	1 cut(s)	1364
PvuII	CAGCTG	1 cut(s)	562
RsaI	GTAC	6 cut(s)	749, 1151, 1796, 2012, 2282, 2354
RsaNI	GTAC	6 cut(s)	748, 1150, 1795, 2011, 2281, 2353
RseI	CAYNNNNRTG	3 cut(s)	1845, 1847, 2945
SacI	GAGCTC	1 cut(s)	2107
SaqAI	TTAA	4 cut(s)	675, 777, 1809, 2967
Sau3AI	GATC	5 cut(s)	1804, 2029, 2158, 2434, 2538
Sau96I	GGNCC	5 cut(s)	252, 325, 683, 1078, 1571
SchI	GAGTC	6 cut(s)	577, 778, 815, 1213, 1253, 1715
SduI	GDGCHC	5 cut(s)	14, 299, 1459, 2039, 2107
SexAI	ACCWGGT	1 cut(s)	1434
SfaNI	GCATC	4 cut(s)	488, 1915, 2181, 2295
SfcI	CTRYAG	2 cut(s)	214, 946
SfuI	TTCGAA	5 cut(s)	506, 1010, 1256, 1963, 2791
SgrAI	CRCCGGYG	1 cut(s)	707
SinI	GGWCC	2 cut(s)	252, 325
SmiMI	CAYNNNNRTG	3 cut(s)	1845, 1847, 2945
SmlI	CTYRAG	4 cut(s)	776, 1356, 1808, 1853
SmoI	CTYRAG	4 cut(s)	776, 1356, 1808, 1853
Sse9I	AATT	9 cut(s)	268, 1206, 1273, 2049, 2133, 2738, 2750, 2964, 3046
SspMI	CTAG	7 cut(s)	828, 1449, 1464, 1734, 1778, 2379, 2673
SstI	GAGCTC	1 cut(s)	2107
StyI	CCWWGG	3 cut(s)	1302, 1319, 3011
TaaI	ACNGT	7 cut(s)	7, 457, 487, 1026, 1975, 2041, 2839
TaiI	ACGT	3 cut(s)	192, 201, 237
TasI	AATT	9 cut(s)	268, 1206, 1273, 2049, 2133, 2738, 2750, 2964, 3046
TatI	WGTACW	4 cut(s)	747, 1794, 2010, 2280
TauI	GCSGC	7 cut(s)	53, 250, 707, 793, 1828, 2293, 2401
Tru1I	TTAA	4 cut(s)	675, 777, 1809, 2967
Tru9I	TTAA	4 cut(s)	675, 777, 1809, 2967
TscAI	CASTG	3 cut(s)	1151, 1807, 2964
TseFI	GTSAC	2 cut(s)	2044, 2846
Tsp45I	GTSAC	2 cut(s)	2044, 2846
TspDTI	ATGAA	7 cut(s)	827, 1653, 1907, 2219, 2378, 2507, 2751
TspGWI	ACGGA	2 cut(s)	2022, 2531
TspRI	CASTG	3 cut(s)	1151, 1807, 2964
Tth111I	GACNNNGTC	1 cut(s)	1364
Van91I	CCANNNNNTGG	1 cut(s)	686
Vha464I	CTTAAG	2 cut(s)	776, 1808
VneI	GTGCAC	2 cut(s)	1455, 2035
VpaK11BI	GGWCC	2 cut(s)	252, 325
VspI	ATTAAT	1 cut(s)	675
XapI	RAATTY	5 cut(s)	268, 1273, 2133, 2750, 3046
XbaI	TCTAGA	2 cut(s)	1733, 2672
XceI	RCATGY	2 cut(s)	2281, 2431
XcmI	CCANNNNNNNNNTGG	2 cut(s)	28, 1688
XmiI	GTMKAC	2 cut(s)	1385, 2144
XmnI	GAANNNNTTC	1 cut(s)	3050
XspI	CTAG	7 cut(s)	828, 1449, 1464, 1734, 1778, 2379, 2673
ZraI	GACGTC	1 cut(s)	199
Zsp2I	ATGCAT	2 cut(s)	1022, 2310

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.