Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8487333.1

Orthogroup ID

OG0015165

Physical Location & Seq

Genomic Coordinates Forward (+)

82 .. 2316

Gene Structure 2235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8487333.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

atgcaatatttgtatgtgaaactggttaaagctagagacttctctgtttttggtggaggggaggttgtggctgaagtgaagttgggaaattacagaggggtaacaaagagggtgagtttgaacaatgtggagtggggtcaggtgtttgctttttctaaagattgcatacagtcttcagtggtggaggtttttgtgaaggaggggaacaaagatgacttcttgggaagggtatggtttgatttgaatgaggttccgaggagggtgccgccggatagtcagttggcgccgcagtggtatagaatggaggataagaagggagacaagtcgaaatcgggggaggtgatgatttcgatttggtttgggactcaggctgatgaggcatttgctgaagcttggcattccaaggctgcaaatgtgaattttgatgggcttggttcgattaagtccaaggtttacttgacaccaaggctttggtacctgagggttacagtgattgaagctcaagacattgttcctggggagaaagggtctgcaatgatgaggtttcctgagctttcggcgaaaatccaggtggggaatcaggtcttgaggactaggattgcgcagcctagcagtgtgaggagcctctcgaatcctttgtggaatgaggagatgatgtttgtggtggctgagcctattgaggactacttgctggtctgtgtcgaggatagggttgggccgggacgtgatgaggtggcagggagagtggttattccggtggcagcaattgaaaggcgaacagatgataagcctgtcatttcgaggtggttcaaccttgacaacggcaaccgtttcaccaatgcagctggggagtccaaagtgttgacaaggtttgggtctagaattcatttgagtgtttcacttgatggaggttatcacgtccttgatgaggctacaatgtatagcagtgatcttaagccgactgataagaggctttggaaacctcacattggtgtgcttgaaatgggtattttgggagccactgggcttatgccaatgaagatcaaagaagggaaaggagggtctagtgatgcttattgtgttgcaaagtatggacagaaatgggttcgaactcgaactgttgttgatagcttgtcgcctaagtggaacgagcagtacacgtgggaggtgtttgatccttgcactgttgttaccattggggtgtttgataattctcggattgataagaacacggccaacaatgctggagtccgtgattcccggattgggaaggttaggattcgattgtccacactcgagtctgaccgagtctacactcactcatatccgctcttgatgctgcacccttctggtgtcaagaaaatgggtgagcttcatttggcggtcaggttttcttgtgccaatgtgggtaacatgttgaacatgtacactatgccactgcttcccaagatgcattttgtgcagcctttgactgtgaatcaactggaaactttgagataccaggctatgaatgtggtggtgtcgaggcttagcaggacagagccaccgttggggagagaggtggtggagtacatgcttgaccatgactcgcatatgtggagcatgagaaggagcaaagccaacttcttcaggctagtgaatgttctatcagggcctgttgcttttggaagatttgtggagttgatgcgcagttggcagaagccaatctgctctgccttgttcgttgcaactttccttttgctagttgcatttccggagctcatagtcccaatgatcttgctgcatatggcatttgtgggaatgtggcggtttaagtcccgccctcgccacccatgtttcatggacacaaatctgtcccatgctgagagtgtttatgctgatgagttggatgaggagtttgattcgttcccaacgagtcggagtgcagagattgttaggatgaggtatgaccggcttaggagtgtggctgggaggattcaaactgttgttggtgatgtggctacacaaggtgagaggttccaagcattgctaagctggagagacccaagggcaacattcttgtttgtgatcttctgcttgattgctgctgttgtgttctatgctgtgccgattagagtggtggtggttttggtgggattgtatgtactcaggccaccgagattcaggagcaagctgccttctcagcctttgagcttcttcaggaggttgccaactagggctgatagcttgttgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

744

Amino Acids

84.47

Weight (kDa)

9.39

Isoelectric Point (pI)

37.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04150
fragaria_vesca	FvH4_2g20170
malus_domestica	MD05G1185200.v1.1
prunus_persica	Prupe.8G211500_v2.0.a1
pyrus_communis	pycom05g16990
rosa_chinensis	RchiOBHm_Chr6g0285931
rosa_laevigata	RLG00000012596
rosa_multiflora	Rmu_co8487333.1_g000001 Rmu_sc0004808.1_g000007
rosa_roxburghii	Rroxscaffold_7G00182590
rosa_rugosa	Rorug06G0177500
rosa_samantha	Rh6AG289600 Rh6BG291500 Rh6CG292400 Rh6DG284500
rosa_wichuraiana	Rw6G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	603, 1688
Acc65I	GGTACC	1 cut(s)	474
AccB1I	GGYRCC	3 cut(s)	262, 283, 474
AccBSI	CCGCTC	1 cut(s)	1330
AccI	GTMKAC	1 cut(s)	1311
AccIII	TCCGGA	1 cut(s)	1753
AciI	CCGC	6 cut(s)	266, 287, 1328, 1382, 1807, 1819
AclWI	GGATC	1 cut(s)	1169
AcoI	YGGCCR	1 cut(s)	1233
AcsI	RAATTY	2 cut(s)	418, 882
AcuI	CTGAAG	5 cut(s)	93, 159, 408, 1612, 2182
AcvI	CACGTG	1 cut(s)	1161
AcyI	GRCGYC	1 cut(s)	284
AdeI	CACNNNGTG	1 cut(s)	2009
AfaI	GTAC	5 cut(s)	476, 1157, 1427, 1571, 2145
AfiI	CCNNNNNNNGG	4 cut(s)	928, 989, 1266, 1550
AflII	CTTAAG	1 cut(s)	953
AflIII	ACRYGT	3 cut(s)	1158, 1413, 1422
AgsI	TTSAA	8 cut(s)	121, 244, 497, 770, 811, 1001, 1420, 1979
AjiI	CACGTC	2 cut(s)	725, 919
AjnI	CCWGG	3 cut(s)	514, 567, 1500
AleI	CACNNNNGTG	1 cut(s)	990
Alw21I	GWGCWC	1 cut(s)	1761
Alw26I	GTCTC	3 cut(s)	30, 312, 2034
AlwI	GGATC	1 cut(s)	1169
AlwNI	CAGNNNCTG	1 cut(s)	1655
Ama87I	CYCGRG	1 cut(s)	1295
Aor13HI	TCCGGA	1 cut(s)	1753
AoxI	GGCC	4 cut(s)	716, 1233, 1652, 2150
ApeKI	GCWGC	9 cut(s)	407, 604, 761, 842, 1339, 1462, 1780, 2084, 2173
ApoI	RAATTY	2 cut(s)	418, 882
Asp718I	GGTACC	1 cut(s)	474
AspLEI	GCGC	3 cut(s)	286, 604, 1689
AspS9I	GGNCC	2 cut(s)	716, 1652
AsuC2I	CCSGG	2 cut(s)	720, 1261
AsuHPI	GGTGA	6 cut(s)	124, 352, 826, 1379, 2003, 2021
AsuII	TTCGAA	1 cut(s)	1108
AvaI	CYCGRG	1 cut(s)	1295
AxyI	CCTNAGG	1 cut(s)	479
BanI	GGYRCC	3 cut(s)	262, 283, 474
BanII	GRGCYC	1 cut(s)	1761
BbrPI	CACGTG	1 cut(s)	1161
BbsI	GAAGAC	1 cut(s)	165
Bbv12I	GWGCWC	1 cut(s)	1761
BbvI	GCAGC	9 cut(s)	394, 616, 773, 854, 1326, 1474, 1767, 2071, 2160
BccI	CCATC	2 cut(s)	419, 899
BceAI	ACGGC	2 cut(s)	838, 1248
BcgI	CGANNNNNNTGC	2 cut(s)	244, 278
BciT130I	CCWGG	3 cut(s)	516, 569, 1502
BcnI	CCSGG	2 cut(s)	720, 1261
BcoDI	GTCTC	3 cut(s)	30, 312, 2034
BfaI	CTAG	8 cut(s)	33, 594, 609, 879, 1065, 1634, 1742, 2214
BfoI	RGCGCY	1 cut(s)	287
BfrI	CTTAAG	1 cut(s)	953
BlpI	GCTNAGC	3 cut(s)	669, 1529, 2030
Bme1390I	CCNGG	5 cut(s)	516, 569, 720, 1261, 1502
BmeT110I	CYCGRG	1 cut(s)	1295
BmgBI	CACGTC	2 cut(s)	725, 919
BmgT120I	GGNCC	2 cut(s)	716, 1652
BmiI	GGNNCC	7 cut(s)	252, 264, 285, 476, 623, 1018, 2018
BmrFI	CCNGG	5 cut(s)	516, 569, 720, 1261, 1502
BmrI	ACTGGG	1 cut(s)	1032
BmsI	GCATC	4 cut(s)	1060, 1326, 1440, 1674
BmuI	ACTGGG	1 cut(s)	1032
BpiI	GAAGAC	1 cut(s)	165
BpmI	CTGGAG	2 cut(s)	1266, 2056
Bpu10I	CCTNAGC	2 cut(s)	549, 1955
Bpu1102I	GCTNAGC	3 cut(s)	669, 1529, 2030
Bpu14I	TTCGAA	1 cut(s)	1108
BpuEI	CTTGAG	2 cut(s)	486, 607
BpuMI	CCSGG	2 cut(s)	720, 1261
BsaAI	YACGTR	1 cut(s)	1161
BsaHI	GRCGYC	1 cut(s)	284
BsaI	GGTCTC	1 cut(s)	2034
BsaJI	CCNNGG	6 cut(s)	254, 402, 447, 464, 515, 2045
BsaWI	WCCGGW	2 cut(s)	754, 1753
BsaXI	ACNNNNNCTCC	6 cut(s)	48, 78, 512, 542, 641, 671
Bsc4I	CCNNNNNNNGG	4 cut(s)	928, 989, 1266, 1550
Bse118I	RCCGGY	1 cut(s)	1950
Bse1I	ACTGG	3 cut(s)	27, 1027, 1488
Bse21I	CCTNAGG	1 cut(s)	479
Bse3DI	GCAATG	2 cut(s)	540, 2024
BseAI	TCCGGA	1 cut(s)	1753
BseBI	CCWGG	3 cut(s)	516, 569, 1502
BseDI	CCNNGG	6 cut(s)	254, 402, 447, 464, 515, 2045
BseGI	GGATG	2 cut(s)	1894, 1944
BseLI	CCNNNNNNNGG	4 cut(s)	928, 989, 1266, 1550
BseMI	GCAATG	2 cut(s)	540, 2024
BseMII	CTCAG	7 cut(s)	380, 470, 540, 660, 1854, 2161, 2195
BseNI	ACTGG	3 cut(s)	27, 1027, 1488
BseRI	GAGGAG	4 cut(s)	271, 634, 662, 1907
BseXI	GCAGC	9 cut(s)	394, 616, 773, 854, 1326, 1474, 1767, 2071, 2160
BseYI	CCCAGC	2 cut(s)	845, 1967
BsgI	GTGCAG	3 cut(s)	1325, 1481, 1944
BshFI	GGCC	4 cut(s)	718, 1235, 1654, 2152
BshNI	GGYRCC	3 cut(s)	262, 283, 474
BsiHKAI	GWGCWC	1 cut(s)	1761
BsiHKCI	CYCGRG	1 cut(s)	1295
BsiSI	CCGG	6 cut(s)	269, 719, 755, 1261, 1754, 1951
BslFI	GGGAC	5 cut(s)	376, 735, 1751, 1801, 1840
BslI	CCNNNNNNNGG	4 cut(s)	928, 989, 1266, 1550
BsmAI	GTCTC	3 cut(s)	30, 312, 2034
BsmFI	GGGAC	5 cut(s)	376, 735, 1751, 1801, 1840
BsmI	GAATGC	1 cut(s)	397
BsnI	GGCC	4 cut(s)	718, 1235, 1654, 2152
Bso31I	GGTCTC	1 cut(s)	2034
BsoBI	CYCGRG	1 cut(s)	1295
Bsp119I	TTCGAA	1 cut(s)	1108
Bsp1286I	GDGCHC	1 cut(s)	1761
Bsp13I	TCCGGA	1 cut(s)	1753
Bsp1407I	TGTACA	1 cut(s)	1425
Bsp143I	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
Bsp1720I	GCTNAGC	3 cut(s)	669, 1529, 2030
BspACI	CCGC	6 cut(s)	266, 287, 1328, 1382, 1807, 1819
BspANI	GGCC	4 cut(s)	718, 1235, 1654, 2152
BspCNI	CTCAG	7 cut(s)	379, 471, 541, 661, 1855, 2160, 2194
BspEI	TCCGGA	1 cut(s)	1753
BspLI	GGNNCC	7 cut(s)	252, 264, 285, 476, 623, 1018, 2018
BspPI	GGATC	1 cut(s)	1169
BspT104I	TTCGAA	1 cut(s)	1108
BspT107I	GGYRCC	3 cut(s)	262, 283, 474
BspTI	CTTAAG	1 cut(s)	953
BspTNI	GGTCTC	1 cut(s)	2034
BsrBI	CCGCTC	1 cut(s)	1330
BsrDI	GCAATG	2 cut(s)	540, 2024
BsrFI	RCCGGY	1 cut(s)	1950
BsrGI	TGTACA	1 cut(s)	1425
BsrI	ACTGG	3 cut(s)	27, 1027, 1488
BssAI	RCCGGY	1 cut(s)	1950
BssECI	CCNNGG	6 cut(s)	254, 402, 447, 464, 515, 2045
BssMI	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
BssNI	GRCGYC	1 cut(s)	284
BssT1I	CCWWGG	4 cut(s)	402, 447, 464, 2045
Bst2UI	CCWGG	3 cut(s)	516, 569, 1502
Bst4CI	ACNGT	8 cut(s)	171, 490, 830, 1120, 1186, 1474, 1548, 1984
BstACI	GRCGYC	1 cut(s)	284
BstAFI	CTTAAG	1 cut(s)	953
BstAPI	GCANNNNNTGC	1 cut(s)	1459
BstAUI	TGTACA	1 cut(s)	1425
BstBAI	YACGTR	1 cut(s)	1161
BstBI	TTCGAA	1 cut(s)	1108
BstC8I	GCNNGC	1 cut(s)	2171
BstENI	CCTNNNNNAGG	1 cut(s)	926
BstF5I	GGATG	2 cut(s)	1894, 1944
BstH2I	RGCGCY	1 cut(s)	287
BstHHI	GCGC	3 cut(s)	286, 604, 1689
BstKTI	GATC	5 cut(s)	952, 1044, 1177, 1776, 2070
BstMAI	GTCTC	3 cut(s)	30, 312, 2034
BstMBI	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
BstMWI	GCNNNNNNNGC	6 cut(s)	377, 1241, 1336, 1459, 1693, 2182
BstNI	CCWGG	3 cut(s)	516, 569, 1502
BstNSI	RCATGY	3 cut(s)	1417, 1426, 1576
BstSCI	CCNGG	5 cut(s)	514, 567, 718, 1259, 1500
BstV1I	GCAGC	9 cut(s)	394, 616, 773, 854, 1326, 1474, 1767, 2071, 2160
BstV2I	GAAGAC	1 cut(s)	165
BstXI	CCANNNNNNTGG	1 cut(s)	471
Bsu36I	CCTNAGG	1 cut(s)	479
BsuRI	GGCC	4 cut(s)	718, 1235, 1654, 2152
BtrI	CACGTC	2 cut(s)	725, 919
BtsCI	GGATG	2 cut(s)	1894, 1944
BtsI	GCAGTG	4 cut(s)	296, 619, 952, 1436
BtsIMutI	CAGTG	8 cut(s)	183, 296, 495, 619, 952, 1020, 1182, 1436
Cac8I	GCNNGC	1 cut(s)	2171
CaiI	CAGNNNCTG	1 cut(s)	1655
CfoI	GCGC	3 cut(s)	286, 604, 1689
Cfr10I	RCCGGY	1 cut(s)	1950
Cfr13I	GGNCC	2 cut(s)	716, 1652
Csp6I	GTAC	5 cut(s)	475, 1156, 1426, 1570, 2144
CviAII	CATG	8 cut(s)	1414, 1423, 1573, 1583, 1603, 1833, 1840, 1859
CviQI	GTAC	5 cut(s)	475, 1156, 1426, 1570, 2144
DinI	GGCGCC	1 cut(s)	285
DpnI	GATC	5 cut(s)	951, 1043, 1176, 1775, 2069
DpnII	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
DraIII	CACNNNGTG	1 cut(s)	2009
EaeI	YGGCCR	1 cut(s)	1233
Ecl136II	GAGCTC	1 cut(s)	1759
Eco130I	CCWWGG	4 cut(s)	402, 447, 464, 2045
Eco24I	GRGCYC	1 cut(s)	1761
Eco31I	GGTCTC	1 cut(s)	2034
Eco53kI	GAGCTC	1 cut(s)	1759
Eco57I	CTGAAG	5 cut(s)	93, 159, 408, 1612, 2182
Eco72I	CACGTG	1 cut(s)	1161
Eco81I	CCTNAGG	1 cut(s)	479
Eco88I	CYCGRG	1 cut(s)	1295
EcoICRI	GAGCTC	1 cut(s)	1759
EcoNI	CCTNNNNNAGG	1 cut(s)	926
EcoO109I	RGGNCCY	1 cut(s)	1652
EcoRI	GAATTC	1 cut(s)	882
EcoRII	CCWGG	3 cut(s)	514, 567, 1500
EcoT14I	CCWWGG	4 cut(s)	402, 447, 464, 2045
EcoT22I	ATGCAT	1 cut(s)	1455
EcoT38I	GRGCYC	1 cut(s)	1761
EgeI	GGCGCC	1 cut(s)	285
EheI	GGCGCC	1 cut(s)	285
ErhI	CCWWGG	4 cut(s)	402, 447, 464, 2045
FaeI	CATG	8 cut(s)	1417, 1426, 1576, 1586, 1606, 1836, 1843, 1862
FalI	AAGNNNNNCTT	2 cut(s)	440, 472
FaqI	GGGAC	5 cut(s)	376, 735, 1751, 1801, 1840
FatI	CATG	8 cut(s)	1413, 1422, 1572, 1582, 1602, 1832, 1839, 1858
FauI	CCCGC	1 cut(s)	1826
FauNDI	CATATG	2 cut(s)	1593, 1785
FblI	GTMKAC	1 cut(s)	1311
FokI	GGATG	2 cut(s)	1901, 1951
FriOI	GRGCYC	1 cut(s)	1761
FspBI	CTAG	8 cut(s)	33, 594, 609, 879, 1065, 1634, 1742, 2214
FspI	TGCGCA	2 cut(s)	603, 1688
GlaI	GCGC	3 cut(s)	285, 603, 1688
GsaI	CCCAGC	2 cut(s)	849, 1971
GsuI	CTGGAG	2 cut(s)	1266, 2056
HaeII	RGCGCY	1 cut(s)	287
HaeIII	GGCC	4 cut(s)	718, 1235, 1654, 2152
HapII	CCGG	6 cut(s)	269, 719, 755, 1261, 1754, 1951
HhaI	GCGC	3 cut(s)	286, 604, 1689
Hin1I	GRCGYC	1 cut(s)	284
Hin1II	CATG	8 cut(s)	1417, 1426, 1576, 1586, 1606, 1836, 1843, 1862
Hin6I	GCGC	3 cut(s)	284, 602, 1687
HinP1I	GCGC	3 cut(s)	284, 602, 1687
HincII	GTYRAC	1 cut(s)	864
HindII	GTYRAC	1 cut(s)	864
HindIII	AAGCTT	1 cut(s)	390
HpaII	CCGG	6 cut(s)	269, 719, 755, 1261, 1754, 1951
HphI	GGTGA	6 cut(s)	124, 352, 826, 1379, 2003, 2021
Hpy166II	GTNNAC	6 cut(s)	454, 864, 1158, 1290, 1312, 1428
Hpy188I	TCNGA	4 cut(s)	255, 1218, 1303, 1920
Hpy8I	GTNNAC	6 cut(s)	454, 864, 1158, 1290, 1312, 1428
HpyAV	CCTTC	8 cut(s)	190, 219, 307, 1043, 1264, 1356, 1602, 2187
HpyCH4III	ACNGT	8 cut(s)	171, 490, 830, 1120, 1186, 1474, 1548, 1984
HpyCH4IV	ACGT	3 cut(s)	724, 918, 1160
HpyF10VI	GCNNNNNNNGC	6 cut(s)	377, 1241, 1336, 1459, 1693, 2182
HpySE526I	ACGT	3 cut(s)	724, 918, 1160
Hsp92I	GRCGYC	1 cut(s)	284
Hsp92II	CATG	8 cut(s)	1417, 1426, 1576, 1586, 1606, 1836, 1843, 1862
HspAI	GCGC	3 cut(s)	284, 602, 1687
KasI	GGCGCC	1 cut(s)	283
Kpn2I	TCCGGA	1 cut(s)	1753
KpnI	GGTACC	1 cut(s)	478
Kzo9I	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
LmnI	GCTCC	6 cut(s)	621, 1016, 1599, 1611, 1756, 2166
Lsp1109I	GCAGC	9 cut(s)	394, 616, 773, 854, 1326, 1474, 1767, 2071, 2160
LweI	GCATC	4 cut(s)	1060, 1326, 1440, 1674
MaeI	CTAG	8 cut(s)	33, 594, 609, 879, 1065, 1634, 1742, 2214
MaeII	ACGT	3 cut(s)	724, 918, 1160
MaeIII	GTNAC	4 cut(s)	100, 484, 1189, 1409
MalI	GATC	5 cut(s)	951, 1043, 1176, 1775, 2069
MbiI	CCGCTC	1 cut(s)	1330
MboI	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
MboII	GAAGA	6 cut(s)	165, 1051, 1618, 1680, 2062, 2188
MfeI	CAATTG	1 cut(s)	765
MhlI	GDGCHC	1 cut(s)	1761
MluCI	AATT	5 cut(s)	88, 418, 765, 882, 1210
Mly113I	GGCGCC	1 cut(s)	284
MlyI	GAGTC	7 cut(s)	358, 860, 1257, 1307, 1317, 1580, 1924
MmeI	TCCRAC	2 cut(s)	1866, 1898
Mph1103I	ATGCAT	1 cut(s)	1455
MroI	TCCGGA	1 cut(s)	1753
MseI	TTAA	4 cut(s)	27, 441, 954, 1812
MslI	CAYNNNNRTG	4 cut(s)	891, 990, 992, 1199
MspA1I	CMGCKG	1 cut(s)	845
MspCI	CTTAAG	1 cut(s)	953
MspI	CCGG	6 cut(s)	269, 719, 755, 1261, 1754, 1951
MspR9I	CCNGG	5 cut(s)	516, 569, 720, 1261, 1502
MunI	CAATTG	1 cut(s)	765
Mva1269I	GAATGC	1 cut(s)	397
MvaI	CCWGG	3 cut(s)	516, 569, 1502
MwoI	GCNNNNNNNGC	6 cut(s)	377, 1241, 1336, 1459, 1693, 2182
NarI	GGCGCC	1 cut(s)	284
NciI	CCSGG	2 cut(s)	720, 1261
NdeI	CATATG	2 cut(s)	1593, 1785
NdeII	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
NlaIII	CATG	8 cut(s)	1417, 1426, 1576, 1586, 1606, 1836, 1843, 1862
NlaIV	GGNNCC	7 cut(s)	252, 264, 285, 476, 623, 1018, 2018
NsbI	TGCGCA	2 cut(s)	603, 1688
NsiI	ATGCAT	1 cut(s)	1455
NspI	RCATGY	3 cut(s)	1417, 1426, 1576
NspV	TTCGAA	1 cut(s)	1108
OliI	CACNNNNGTG	1 cut(s)	990
PaeR7I	CTCGAG	1 cut(s)	1295
PciI	ACATGT	2 cut(s)	1413, 1422
PcsI	WCGNNNNNNNCGW	1 cut(s)	1910
PctI	GAATGC	1 cut(s)	397
PfeI	GAWTC	8 cut(s)	577, 631, 1256, 1279, 1477, 1901, 1975, 2160
PflFI	GACNNNGTC	1 cut(s)	1307
PfoI	TCCNGGA	1 cut(s)	1259
PleI	GAGTC	7 cut(s)	358, 859, 1256, 1306, 1316, 1580, 1923
PluTI	GGCGCC	1 cut(s)	287
PmaCI	CACGTG	1 cut(s)	1161
PmlI	CACGTG	1 cut(s)	1161
PpsI	GAGTC	7 cut(s)	358, 859, 1256, 1306, 1316, 1580, 1923
Ppu21I	YACGTR	1 cut(s)	1161
PscI	ACATGT	2 cut(s)	1413, 1422
Psp124BI	GAGCTC	1 cut(s)	1761
Psp6I	CCWGG	3 cut(s)	514, 567, 1500
PspCI	CACGTG	1 cut(s)	1161
PspFI	CCCAGC	2 cut(s)	845, 1967
PspGI	CCWGG	3 cut(s)	514, 567, 1500
PspN4I	GGNNCC	7 cut(s)	252, 264, 285, 476, 623, 1018, 2018
PspPI	GGNCC	2 cut(s)	716, 1652
PspXI	VCTCGAGB	1 cut(s)	1295
PsrI	GAACNNNNNNTAC	2 cut(s)	1139, 1171
PstNI	CAGNNNCTG	1 cut(s)	1655
PsyI	GACNNNGTC	1 cut(s)	1307
PvuII	CAGCTG	1 cut(s)	845
RsaI	GTAC	5 cut(s)	476, 1157, 1427, 1571, 2145
RsaNI	GTAC	5 cut(s)	475, 1156, 1426, 1570, 2144
RseI	CAYNNNNRTG	4 cut(s)	891, 990, 992, 1199
SacI	GAGCTC	1 cut(s)	1761
SaqAI	TTAA	4 cut(s)	27, 441, 954, 1812
Sau3AI	GATC	5 cut(s)	949, 1041, 1174, 1773, 2067
Sau96I	GGNCC	2 cut(s)	716, 1652
SchI	GAGTC	7 cut(s)	358, 860, 1257, 1307, 1317, 1580, 1924
ScrFI	CCNGG	5 cut(s)	516, 569, 720, 1261, 1502
SduI	GDGCHC	1 cut(s)	1761
SfaNI	GCATC	4 cut(s)	1060, 1326, 1440, 1674
SfoI	GGCGCC	1 cut(s)	285
Sfr274I	CTCGAG	1 cut(s)	1295
SfuI	TTCGAA	1 cut(s)	1108
SlaI	CTCGAG	1 cut(s)	1295
SmiMI	CAYNNNNRTG	4 cut(s)	891, 990, 992, 1199
SmlI	CTYRAG	4 cut(s)	501, 586, 953, 1295
SmoI	CTYRAG	4 cut(s)	501, 586, 953, 1295
Sse9I	AATT	5 cut(s)	88, 418, 765, 882, 1210
SsiI	CCGC	6 cut(s)	266, 287, 1328, 1382, 1807, 1819
SspDI	GGCGCC	1 cut(s)	283
SspI	AATATT	1 cut(s)	8
SspMI	CTAG	8 cut(s)	33, 594, 609, 879, 1065, 1634, 1742, 2214
SstI	GAGCTC	1 cut(s)	1761
StyD4I	CCNGG	5 cut(s)	514, 567, 718, 1259, 1500
StyI	CCWWGG	4 cut(s)	402, 447, 464, 2045
TaaI	ACNGT	8 cut(s)	171, 490, 830, 1120, 1186, 1474, 1548, 1984
TaiI	ACGT	3 cut(s)	727, 921, 1163
TaqII	GACCGA	1 cut(s)	1320
TasI	AATT	5 cut(s)	88, 418, 765, 882, 1210
TatI	WGTACW	4 cut(s)	1155, 1425, 1569, 2143
TauI	GCSGC	2 cut(s)	268, 289
TfiI	GAWTC	8 cut(s)	577, 631, 1256, 1279, 1477, 1901, 1975, 2160
Tru1I	TTAA	4 cut(s)	27, 441, 954, 1812
Tru9I	TTAA	4 cut(s)	27, 441, 954, 1812
TscAI	CASTG	8 cut(s)	183, 296, 495, 619, 952, 1027, 1189, 1443
TseI	GCWGC	9 cut(s)	407, 604, 761, 842, 1339, 1462, 1780, 2084, 2173
TspDTI	ATGAA	5 cut(s)	875, 1052, 1364, 1523, 1828
TspGWI	ACGGA	1 cut(s)	1241
TspRI	CASTG	8 cut(s)	183, 296, 495, 619, 952, 1027, 1189, 1443
Tth111I	GACNNNGTC	1 cut(s)	1307
Vha464I	CTTAAG	1 cut(s)	953
XagI	CCTNNNNNAGG	1 cut(s)	926
XapI	RAATTY	2 cut(s)	418, 882
XbaI	TCTAGA	1 cut(s)	878
XceI	RCATGY	3 cut(s)	1417, 1426, 1576
XhoI	CTCGAG	1 cut(s)	1295
XmiI	GTMKAC	1 cut(s)	1311
XspI	CTAG	8 cut(s)	33, 594, 609, 879, 1065, 1634, 1742, 2214
Zsp2I	ATGCAT	1 cut(s)	1455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.