Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005712

Physical Location & Seq

Genomic Coordinates Reverse (-)

20292064 .. 20296271

Gene Structure 4208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g24980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGGTGTTGTCACTGTTGGTGAGTTGAAGCCTAGCATTTCAGGAAAGAGGTCTTTTCGTCCAAGCTCAAGTATAAGGCATGCCATGGAATGGCCAATCTCTGATGTTTCTAGTGATCTTACTGTCGAGATAGGAGCATCAAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCTCGGAGTGGAAAGATTCGGAAACTGTTGCTTGAAGCAAAAGATTCAAAAGTGGCACGCGTAATTCTTCCATCCGTTCCTGGTGGAGCAGAGGCATTTGAGCTAGCTGCAAAGTTCTGTTATGGACATAATATTGAGATCACACAAGCAAATGTTGCCTTTCTCCGCTGCACAGCTCACTTTCTTGAAATGACGGAAGAGTATGCTGAGAAGAACATGGAAACAAGAACTGAAGCTTATCTAAAGGATATGGTGTTCCCCAACATATCAAAATCAATAGCAGTTCTTCATCGTTGCGAAACACTCTTGCCTGCAGCAGAAGATATCAACCTGGTTAGCAGGCTCATCAATGCAATTGCAAACAATGCGTGCAAGGAGCAGCTCACCTCTGGCTTACAGAAACTTGACCACAACTTTCCTTCAAAAGTAGCTTCTTTGGAACCTGAAACGCCCTCGGATTGGTGGGGAAAAGCACTTTCAGTGCTTAGTCTTGACTTCTTCCAAAGGGTTTTATCTGCAGTGAAAACCAAGGGTCTTAAACAGGATATGATCAGCAAAATTTTGATAAATTACTCCCACAACTCTCTACAAGGTCTTGTTGTAAGGGATGCGCAATTGGTCAAAGGAAGTCTACTGGATCTAGAACTGCAAAGGAAACAAAGGGTCATTGTTGAGGCTATTGTTAGTTTACTACCAACACAATCAAGGAAGAGTCCAGTGCCAATGGCATTTCTTTCGAGTTTGTTGAAAACTGCAATTGCAGCATCAGCATCCACTTCATGCAGATCGGATTTAGAGAGGCGGATTGGTTTGCAGCTGGATCAGGCAATTCTTGAAGACATCCTCATTCCTACAAACTCACAGGGAAACAACCACAGCACAATTTATGATGCTGATACTATAGTGAGGATCTTCTCCATATTTTTGAACTTGGATGAGGATGATGAAGATGACACTAATCTGTTAAGAGATGAAAGTCAAATGGTTTATGATTTCGACAGCCCTGGATCTCCTAAACAAAGTTCAATCTTGAAGGTCTCAAAGTTACTTGACAATTATCTGGCCGAAGTTGCATTGGACTCAAACTTGTCACCATCAAAGTTCACAGCTCTAGCAGAACTACTTCCAGACCATGCACGCATAGTAAGTGATGGACTCTACAGAGCTGTGGATATCTTCCTCAAAGTTCACCCAAACATGAAGGACTCTGAAAGGTACCGGCTTTGCAAAACCATAGACTGCCAGAAACTATCCCAAGAAGCCTGCAGTCATGCAGCACAGAATGAAAGGCTACCGGTGCAGATGGCAGTTCAAGTCCTATACTTTGAGCAAATCAGGCTGAGGAATGCAATGAATGGTGGCCACAACCAGTTCTTCTTTGGCGCAATAAATGGTACTCAGTTCCCTCAAAGATCAGGCAGTGGTGCTGGCAGTGGAGCCATTTCCCCTCGAGACAACTATGCATCAGTTCGGAGAGAGAATCGAGAGCTCAAGCTTGAAGTAGCCAGGATGAGAATGAGGCTGACAGACTTGGAGAAAGATCATGTCTCTATGAAGCAAGAGCTTGTTAAGACACATCCTGCAAATAAGTTGTTCAAATCCTTCACCAAAAAATTGGGGAAGATCAATGCATTGTTTGGGATTAATAGTATCAAGACCTTGGGGGGTAAAGCACATTCAGAGAGCAGATTCCCGTTTCAGAAGCGTAGGCGTCATTCGGTTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

633

Amino Acids

70.43

Weight (kDa)

9.07

Isoelectric Point (pI)

45.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	210 - 479	6.9e-89	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03010 AT1G03010 AT1G03010
fragaria_vesca	FvH4_2g24980 FvH4_2g24980
malus_domestica	MD03G1278600.v1.1 MD03G1278700.v1.1 MD11G1301000.v1.1
prunus_persica	Prupe.8G254800_v2.0.a1 Prupe.8G254800_v2.0.a1 Prupe.8G254800_v2.0.a1
pyrus_communis	pycom03g22180 pycom11g26390
rosa_chinensis	RchiOBHm_Chr6g0292951
rosa_laevigata	RLG00000011979
rosa_roxburghii	Rroxscaffold_7G00174540
rosa_rugosa	Rorug06G0231100 Rorug06G0231200 Rorug06G0231300 Rorug06G0231400 Rorug06G0231400 Rorug06G0231400 Rorug06G0231500
rosa_samantha	Rh6AG344100 Rh6BG351500 Rh6CG358600 Rh6DG344300
rosa_wichuraiana	Rw6G030040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	783
Acc65I	GGTACC	1 cut(s)	1386
AccB1I	GGYRCC	1 cut(s)	1386
AccB7I	CCANNNNNTGG	1 cut(s)	90
AccI	GTMKAC	1 cut(s)	802
AccII	CGCG	1 cut(s)	231
AciI	CCGC	2 cut(s)	337, 973
AclWI	GGATC	4 cut(s)	816, 999, 1088, 1186
AcoI	YGGCCR	3 cut(s)	92, 1233, 1531
AcsI	RAATTY	1 cut(s)	729
AcuI	CTGAAG	1 cut(s)	423
AcyI	GRCGYC	1 cut(s)	1882
AfaI	GTAC	2 cut(s)	1388, 1567
AfiI	CCNNNNNNNGG	2 cut(s)	90, 630
AflIII	ACRYGT	1 cut(s)	229
AgeI	ACCGGT	1 cut(s)	1465
AjnI	CCWGG	4 cut(s)	250, 501, 1174, 1676
AloI	GAACNNNNNNTCC	2 cut(s)	410, 442
Alw21I	GWGCWC	1 cut(s)	1662
Alw26I	GTCTC	3 cut(s)	1213, 1617, 1723
AlwI	GGATC	4 cut(s)	816, 999, 1088, 1186
Ama87I	CYCGRG	1 cut(s)	1620
AoxI	GGCC	3 cut(s)	92, 1233, 1531
ApeKI	GCWGC	7 cut(s)	278, 339, 485, 550, 932, 985, 1445
ApoI	RAATTY	1 cut(s)	729
AseI	ATTAAT	1 cut(s)	1815
AsiGI	ACCGGT	1 cut(s)	1465
Asp700I	GAANNNNTTC	1 cut(s)	1293
Asp718I	GGTACC	1 cut(s)	1386
AspLEI	GCGC	2 cut(s)	784, 1556
AsuHPI	GGTGA	5 cut(s)	32, 547, 1254, 1352, 1768
AsuNHI	GCTAGC	1 cut(s)	274
AvaI	CYCGRG	1 cut(s)	1620
BaeI	ACNNNNGTAYC	2 cut(s)	1059, 1092
BalI	TGGCCA	2 cut(s)	94, 1533
BanI	GGYRCC	1 cut(s)	1386
BanII	GRGCYC	1 cut(s)	1662
BbsI	GAAGAC	1 cut(s)	1014
Bbv12I	GWGCWC	1 cut(s)	1662
BbvCI	CCTCAGC	1 cut(s)	1511
BbvI	GCAGC	7 cut(s)	265, 326, 497, 562, 944, 997, 1457
BccI	CCATC	4 cut(s)	250, 1273, 1316, 1468
BcgI	CGANNNNNNTGC	2 cut(s)	888, 922
BciT130I	CCWGG	4 cut(s)	252, 503, 1176, 1678
BclI	TGATCA	1 cut(s)	720
BcoDI	GTCTC	3 cut(s)	1213, 1617, 1723
BfaI	CTAG	6 cut(s)	33, 111, 167, 275, 812, 1283
BfmI	CTRYAG	5 cut(s)	483, 687, 1071, 1330, 1435
BisI	GCNGC	7 cut(s)	279, 340, 486, 551, 933, 986, 1446
BlsI	GCNGC	7 cut(s)	280, 341, 487, 552, 934, 987, 1447
Bme1390I	CCNGG	4 cut(s)	252, 503, 1176, 1678
BmeT110I	CYCGRG	1 cut(s)	1620
BmiI	GGNNCC	3 cut(s)	612, 1388, 1609
BmrFI	CCNGG	4 cut(s)	252, 503, 1176, 1678
BmsI	GCATC	6 cut(s)	146, 769, 944, 950, 1051, 1643
BmtI	GCTAGC	1 cut(s)	278
BpiI	GAAGAC	1 cut(s)	1014
Bpu10I	CCTNAGC	1 cut(s)	1511
BpuEI	CTTGAG	2 cut(s)	52, 1646
BsaHI	GRCGYC	1 cut(s)	1882
BsaI	GGTCTC	1 cut(s)	1213
BsaJI	CCNNGG	5 cut(s)	84, 624, 699, 1174, 1830
BsaWI	WCCGGW	1 cut(s)	1465
Bsc4I	CCNNNNNNNGG	2 cut(s)	90, 630
Bse118I	RCCGGY	2 cut(s)	1389, 1465
Bse1I	ACTGG	3 cut(s)	810, 887, 1540
Bse3DI	GCAATG	1 cut(s)	1527
BseBI	CCWGG	4 cut(s)	252, 503, 1176, 1678
BseDI	CCNNGG	5 cut(s)	84, 624, 699, 1174, 1830
BseGI	GGATG	8 cut(s)	242, 784, 941, 1011, 1111, 1117, 1686, 1747
BseLI	CCNNNNNNNGG	2 cut(s)	90, 630
BseMI	GCAATG	1 cut(s)	1527
BseMII	CTCAG	3 cut(s)	369, 1502, 1583
BseNI	ACTGG	3 cut(s)	810, 887, 1540
BseXI	GCAGC	7 cut(s)	265, 326, 497, 562, 944, 997, 1457
BsgI	GTGCAG	2 cut(s)	325, 1490
Bsh1236I	CGCG	1 cut(s)	231
BshFI	GGCC	3 cut(s)	94, 1235, 1533
BshNI	GGYRCC	1 cut(s)	1386
BshTI	ACCGGT	1 cut(s)	1465
BsiHKAI	GWGCWC	1 cut(s)	1662
BsiHKCI	CYCGRG	1 cut(s)	1620
BsiSI	CCGG	2 cut(s)	1390, 1466
BslI	CCNNNNNNNGG	2 cut(s)	90, 630
BsmAI	GTCTC	3 cut(s)	1213, 1617, 1723
BsmI	GAATGC	1 cut(s)	1522
BsnI	GGCC	3 cut(s)	94, 1235, 1533
Bso31I	GGTCTC	1 cut(s)	1213
BsoBI	CYCGRG	1 cut(s)	1620
Bsp1286I	GDGCHC	1 cut(s)	1662
Bsp19I	CCATGG	1 cut(s)	84
BspACI	CCGC	2 cut(s)	337, 973
BspANI	GGCC	3 cut(s)	94, 1235, 1533
BspCNI	CTCAG	3 cut(s)	370, 1503, 1582
BspFNI	CGCG	1 cut(s)	231
BspLI	GGNNCC	3 cut(s)	612, 1388, 1609
BspMAI	CTGCAG	3 cut(s)	487, 691, 1439
BspOI	GCTAGC	1 cut(s)	278
BspPI	GGATC	4 cut(s)	816, 999, 1088, 1186
BspT107I	GGYRCC	1 cut(s)	1386
BspTNI	GGTCTC	1 cut(s)	1213
BsrDI	GCAATG	1 cut(s)	1527
BsrFI	RCCGGY	2 cut(s)	1389, 1465
BsrI	ACTGG	3 cut(s)	810, 887, 1540
BssAI	RCCGGY	2 cut(s)	1389, 1465
BssECI	CCNNGG	5 cut(s)	84, 624, 699, 1174, 1830
BssNI	GRCGYC	1 cut(s)	1882
BssT1I	CCWWGG	3 cut(s)	84, 699, 1830
Bst2UI	CCWGG	4 cut(s)	252, 503, 1176, 1678
Bst4CI	ACNGT	3 cut(s)	16, 124, 198
Bst6I	CTCTTC	2 cut(s)	363, 875
BstACI	GRCGYC	1 cut(s)	1882
BstAPI	GCANNNNNTGC	2 cut(s)	326, 536
BstC8I	GCNNGC	9 cut(s)	81, 229, 276, 483, 512, 541, 1309, 1435, 1600
BstDEI	CTNAG	4 cut(s)	378, 656, 1511, 1569
BstDSI	CCRYGG	1 cut(s)	84
BstF5I	GGATG	8 cut(s)	242, 784, 941, 1011, 1111, 1117, 1686, 1747
BstFNI	CGCG	1 cut(s)	231
BstHHI	GCGC	2 cut(s)	784, 1556
BstMAI	GTCTC	3 cut(s)	1213, 1617, 1723
BstMWI	GCNNNNNNNGC	7 cut(s)	326, 536, 932, 938, 1241, 1468, 1507
BstNI	CCWGG	4 cut(s)	252, 503, 1176, 1678
BstNSI	RCATGY	1 cut(s)	83
BstSCI	CCNGG	4 cut(s)	250, 501, 1174, 1676
BstSFI	CTRYAG	5 cut(s)	483, 687, 1071, 1330, 1435
BstUI	CGCG	1 cut(s)	231
BstV1I	GCAGC	7 cut(s)	265, 326, 497, 562, 944, 997, 1457
BstV2I	GAAGAC	1 cut(s)	1014
BstX2I	RGATCY	3 cut(s)	808, 1080, 1178
BstXI	CCANNNNNNTGG	1 cut(s)	1786
BstYI	RGATCY	3 cut(s)	808, 1080, 1178
BsuRI	GGCC	3 cut(s)	94, 1235, 1533
BtgI	CCRYGG	1 cut(s)	84
BtsCI	GGATG	8 cut(s)	242, 784, 941, 1011, 1111, 1117, 1686, 1747
BtsI	GCAGTG	3 cut(s)	696, 1597, 1609
BtsIMutI	CAGTG	6 cut(s)	12, 657, 696, 894, 1597, 1609
Cac8I	GCNNGC	9 cut(s)	81, 229, 276, 483, 512, 541, 1309, 1435, 1600
CfoI	GCGC	2 cut(s)	784, 1556
Cfr10I	RCCGGY	2 cut(s)	1389, 1465
CseI	GACGC	1 cut(s)	1871
CsiI	ACCWGGT	1 cut(s)	501
Csp6I	GTAC	2 cut(s)	1387, 1566
CspAI	ACCGGT	1 cut(s)	1465
CviAII	CATG	8 cut(s)	80, 85, 388, 951, 1304, 1369, 1442, 1715
CviQI	GTAC	2 cut(s)	1387, 1566
DdeI	CTNAG	4 cut(s)	378, 656, 1511, 1569
EaeI	YGGCCR	3 cut(s)	92, 1233, 1531
Eam1104I	CTCTTC	2 cut(s)	363, 875
EarI	CTCTTC	2 cut(s)	363, 875
EciI	GGCGGA	1 cut(s)	988
Ecl136II	GAGCTC	1 cut(s)	1660
Eco130I	CCWWGG	3 cut(s)	84, 699, 1830
Eco24I	GRGCYC	1 cut(s)	1662
Eco31I	GGTCTC	1 cut(s)	1213
Eco32I	GATATC	2 cut(s)	496, 1345
Eco53kI	GAGCTC	1 cut(s)	1660
Eco57I	CTGAAG	1 cut(s)	423
Eco88I	CYCGRG	1 cut(s)	1620
EcoICRI	GAGCTC	1 cut(s)	1660
EcoRII	CCWGG	4 cut(s)	250, 501, 1174, 1676
EcoRV	GATATC	2 cut(s)	496, 1345
EcoT14I	CCWWGG	3 cut(s)	84, 699, 1830
EcoT22I	ATGCAT	2 cut(s)	1636, 1804
EcoT38I	GRGCYC	1 cut(s)	1662
ErhI	CCWWGG	3 cut(s)	84, 699, 1830
FaeI	CATG	8 cut(s)	83, 88, 391, 954, 1307, 1372, 1445, 1718
FatI	CATG	8 cut(s)	79, 84, 387, 950, 1303, 1368, 1441, 1714
FbaI	TGATCA	1 cut(s)	720
FblI	GTMKAC	1 cut(s)	802
Fnu4HI	GCNGC	7 cut(s)	279, 340, 486, 551, 933, 986, 1446
FokI	GGATG	8 cut(s)	229, 791, 928, 998, 1118, 1124, 1693, 1734
FriOI	GRGCYC	1 cut(s)	1662
Fsp4HI	GCNGC	7 cut(s)	279, 340, 486, 551, 933, 986, 1446
FspBI	CTAG	6 cut(s)	33, 111, 167, 275, 812, 1283
FspI	TGCGCA	1 cut(s)	783
GlaI	GCGC	2 cut(s)	783, 1555
GluI	GCNGC	7 cut(s)	279, 340, 486, 551, 933, 986, 1446
HaeIII	GGCC	3 cut(s)	94, 1235, 1533
HapII	CCGG	2 cut(s)	1390, 1466
HgaI	GACGC	1 cut(s)	1871
HhaI	GCGC	2 cut(s)	784, 1556
Hin1I	GRCGYC	1 cut(s)	1882
Hin1II	CATG	8 cut(s)	83, 88, 391, 954, 1307, 1372, 1445, 1718
Hin6I	GCGC	2 cut(s)	782, 1554
HinP1I	GCGC	2 cut(s)	782, 1554
HindIII	AAGCTT	3 cut(s)	142, 405, 1664
HinfI	GANTC	8 cut(s)	187, 215, 883, 1250, 1326, 1376, 1651, 1860
HpaII	CCGG	2 cut(s)	1390, 1466
HphI	GGTGA	5 cut(s)	32, 547, 1254, 1352, 1768
Hpy166II	GTNNAC	4 cut(s)	803, 860, 1275, 1360
Hpy188I	TCNGA	9 cut(s)	103, 177, 192, 628, 961, 1381, 1644, 1852, 1872
Hpy8I	GTNNAC	4 cut(s)	803, 860, 1275, 1360
HpyAV	CCTTC	4 cut(s)	600, 1198, 1366, 1783
HpyCH4III	ACNGT	3 cut(s)	16, 124, 198
HpyF10VI	GCNNNNNNNGC	7 cut(s)	326, 536, 932, 938, 1241, 1468, 1507
HpyF3I	CTNAG	4 cut(s)	378, 656, 1511, 1569
Hsp92I	GRCGYC	1 cut(s)	1882
Hsp92II	CATG	8 cut(s)	83, 88, 391, 954, 1307, 1372, 1445, 1718
HspAI	GCGC	2 cut(s)	782, 1554
KpnI	GGTACC	1 cut(s)	1390
Ksp22I	TGATCA	1 cut(s)	720
LmnI	GCTCC	4 cut(s)	134, 257, 547, 1607
Lsp1109I	GCAGC	7 cut(s)	265, 326, 497, 562, 944, 997, 1457
LweI	GCATC	6 cut(s)	146, 769, 944, 950, 1051, 1643
MabI	ACCWGGT	1 cut(s)	501
MaeI	CTAG	6 cut(s)	33, 111, 167, 275, 812, 1283
MaeIII	GTNAC	3 cut(s)	10, 1215, 1260
MfeI	CAATTG	3 cut(s)	525, 785, 927
MflI	RGATCY	3 cut(s)	808, 1080, 1178
MhlI	GDGCHC	1 cut(s)	1662
MlsI	TGGCCA	2 cut(s)	94, 1533
MluI	ACGCGT	1 cut(s)	229
MluNI	TGGCCA	2 cut(s)	94, 1533
MlyI	GAGTC	4 cut(s)	892, 1244, 1320, 1370
Mox20I	TGGCCA	2 cut(s)	94, 1533
Mph1103I	ATGCAT	2 cut(s)	1636, 1804
MroXI	GAANNNNTTC	1 cut(s)	1293
MscI	TGGCCA	2 cut(s)	94, 1533
MseI	TTAA	4 cut(s)	708, 1136, 1740, 1815
Msp20I	TGGCCA	2 cut(s)	94, 1533
MspA1I	CMGCKG	2 cut(s)	339, 988
MspI	CCGG	2 cut(s)	1390, 1466
MspR9I	CCNGG	4 cut(s)	252, 503, 1176, 1678
MunI	CAATTG	3 cut(s)	525, 785, 927
Mva1269I	GAATGC	1 cut(s)	1522
MvaI	CCWGG	4 cut(s)	252, 503, 1176, 1678
MvnI	CGCG	1 cut(s)	231
MwoI	GCNNNNNNNGC	7 cut(s)	326, 536, 932, 938, 1241, 1468, 1507
NcoI	CCATGG	1 cut(s)	84
NheI	GCTAGC	1 cut(s)	274
NlaIII	CATG	8 cut(s)	83, 88, 391, 954, 1307, 1372, 1445, 1718
NlaIV	GGNNCC	3 cut(s)	612, 1388, 1609
NmuCI	GTSAC	2 cut(s)	10, 1260
NsbI	TGCGCA	1 cut(s)	783
NsiI	ATGCAT	2 cut(s)	1636, 1804
NspI	RCATGY	1 cut(s)	83
PaeI	GCATGC	1 cut(s)	83
PaeR7I	CTCGAG	1 cut(s)	1620
PctI	GAATGC	1 cut(s)	1522
PdmI	GAANNNNTTC	1 cut(s)	1293
PfeI	GAWTC	4 cut(s)	187, 215, 1651, 1860
PflMI	CCANNNNNTGG	1 cut(s)	90
PinAI	ACCGGT	1 cut(s)	1465
PkrI	GCNGC	7 cut(s)	280, 341, 487, 552, 934, 987, 1447
PleI	GAGTC	4 cut(s)	891, 1244, 1320, 1370
PpsI	GAGTC	4 cut(s)	891, 1244, 1320, 1370
PshBI	ATTAAT	1 cut(s)	1815
Psp124BI	GAGCTC	1 cut(s)	1662
Psp6I	CCWGG	4 cut(s)	250, 501, 1174, 1676
PspGI	CCWGG	4 cut(s)	250, 501, 1174, 1676
PspN4I	GGNNCC	3 cut(s)	612, 1388, 1609
PstI	CTGCAG	3 cut(s)	487, 691, 1439
PsuI	RGATCY	3 cut(s)	808, 1080, 1178
PvuII	CAGCTG	1 cut(s)	988
RsaI	GTAC	2 cut(s)	1388, 1567
RsaNI	GTAC	2 cut(s)	1387, 1566
SacI	GAGCTC	1 cut(s)	1662
SaqAI	TTAA	4 cut(s)	708, 1136, 1740, 1815
SatI	GCNGC	7 cut(s)	279, 340, 486, 551, 933, 986, 1446
SchI	GAGTC	4 cut(s)	892, 1244, 1320, 1370
ScrFI	CCNGG	4 cut(s)	252, 503, 1176, 1678
SduI	GDGCHC	1 cut(s)	1662
SexAI	ACCWGGT	1 cut(s)	501
SfaNI	GCATC	6 cut(s)	146, 769, 944, 950, 1051, 1643
SfcI	CTRYAG	5 cut(s)	483, 687, 1071, 1330, 1435
Sfr274I	CTCGAG	1 cut(s)	1620
SlaI	CTCGAG	1 cut(s)	1620
SmlI	CTYRAG	3 cut(s)	67, 1620, 1661
SmoI	CTYRAG	3 cut(s)	67, 1620, 1661
SphI	GCATGC	1 cut(s)	83
SsiI	CCGC	2 cut(s)	337, 973
SspI	AATATT	1 cut(s)	304
SspMI	CTAG	6 cut(s)	33, 111, 167, 275, 812, 1283
SstI	GAGCTC	1 cut(s)	1662
StyD4I	CCNGG	4 cut(s)	250, 501, 1174, 1676
StyI	CCWWGG	3 cut(s)	84, 699, 1830
TaaI	ACNGT	3 cut(s)	16, 124, 198
TaqI	TCGA	5 cut(s)	126, 908, 1167, 1621, 1654
TfiI	GAWTC	4 cut(s)	187, 215, 1651, 1860
Tru1I	TTAA	4 cut(s)	708, 1136, 1740, 1815
Tru9I	TTAA	4 cut(s)	708, 1136, 1740, 1815
TscAI	CASTG	6 cut(s)	19, 657, 696, 894, 1597, 1609
TseFI	GTSAC	2 cut(s)	10, 1260
TseI	GCWGC	7 cut(s)	278, 339, 485, 550, 932, 985, 1445
Tsp45I	GTSAC	2 cut(s)	10, 1260
TspDTI	ATGAA	9 cut(s)	449, 939, 1131, 1158, 1385, 1470, 1538, 1739, 1884
TspGWI	ACGGA	2 cut(s)	235, 380
TspRI	CASTG	6 cut(s)	19, 657, 696, 894, 1597, 1609
Van91I	CCANNNNNTGG	1 cut(s)	90
VspI	ATTAAT	1 cut(s)	1815
XapI	RAATTY	1 cut(s)	729
XbaI	TCTAGA	1 cut(s)	811
XceI	RCATGY	1 cut(s)	83
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1547
XhoI	CTCGAG	1 cut(s)	1620
XmiI	GTMKAC	1 cut(s)	802
XmnI	GAANNNNTTC	1 cut(s)	1293
XspI	CTAG	6 cut(s)	33, 111, 167, 275, 812, 1283
Zsp2I	ATGCAT	2 cut(s)	1636, 1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.