Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0005712

Physical Location & Seq

Genomic Coordinates Reverse (-)

36045774 .. 36049938

Gene Structure 4165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1278600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGGGGCCGTCACCATTGGTGAACTGAAGCCTAGCATTTCCGGGAAGCGGTCGTTTCGTCCGAGTTCCAGCATAAGGCATGCCACTGAATGGCCAATCTCTGATGTTTCTAGCGATCTTACTGTGGAAATAGGAGCATCAAGCTTTGCACTTCACAAGTTCCCCCTAGTTTCTAAGAGTGGAAGGATTCGGAGACTGTTGCTTGAAGCAAAAGATGCAAAAGTTTCGCGCATAATTCTCTCTGCTGTTCCGGGTGGACCAGAGGGATTTGAGCTAGCTGCAAAGTTCTGTTACGGAGTTCATGTTGAAATTACGCAGTCAAATGTTGCCATGCTTCGTTGCGTAGCGCACTTCCTGGAAATGACGGAAGAGTATGCTGAGAAAAATATGGAAACGAGAGCTGAAGCTTATCTGAAGGAGACGGTGCTTCCAAACATATCAAAGTCGATATCAGTTCTTCATCGCTGCGAAACCCTCTTGCCAGCAGCAGAAGAAACCAACCTTGTAAGCAGGCTTATCAACGCAATTGCAAACAATGCATGCAAAGAGCAGCTCACCTCTGGCTTATTGAAACTTGACCACAACTTCACTGCAAAAGGAGCTCCAAATATGGAACCTGAAACGCCCGCAGACTGGTGGGGAAAAGCGCTTACAGTGCTTAGCCTCGACTTCTTCCAACGCGTTCTATCCGCGGTGAAAACCAAGGGTCTTAAACAGGATATGATCAGCAAAATTTTAATTAACTATGCTCATAATTCTCTTCAAGGACTTGTCGTCCGAGATAACCAATTGGTGAAAGGAAGCCTCTTGGATTTAGAATTGCAAAAGAAACAAAGGATCATTGTTGAAGCTATAGTTAGTTTGCTTCCAACACAATCAAGGAAGAGTCCAGTTCCAATGGCGTTTCTTTCGAGCTTGTTGAAAACTGCGATTGCAGCATCAGCGTCTACTTCTTGCAGATCCGATTTAGAAAGGCGGATTGGTCTGCAGCTGGATCAGGCAATTCTCGAAGACATCCTGATTCCGGCAAATTCACATGGAAACAACCACAGCACAATCTATGATACAGATGCTGTATTGAGGATCTTTTCGATATTTTTGAACTTGGATGAGGATGATGATGATGAAGATAATCACTTGAGGGACGAAAGCGAAATGGTTTATGATTTCGACAGCCCTGGATCTCCTAAACAAAGTTCAATCCTGAAGGTATCAAAGTTGCTAGACAATTATCTTGCAGAAGTTGCACTCGACTCGAACTTGATGCCGTCAAAGTTCATAGCACTAGCAGAGCTACTTCCGGACCATGCTCGAATATTAAGTGATGGACTCTACCGAGCTGTGGATATCTTCCTCAAAGTGCATCCTAACCTCAAGGACTCTGAACGCTACCGCCTCTGCAAAACCATCGACTGCCAGAAACTATCCCAAGAAGCCTGCAGTCACGCAGCGCAGAACGAAAGGCTACCAGTACAGATGGCAGTTCAAGTGCTCTACTTTGAGCAAATCAGGCTCAGAAATGCAATGAACGGTGGCCACAACCAGTTCTTCTTCGGGGCAATAAACGGTACACAATTCCCTCAGCGATCAGGCAGTGGTGCAGGCAGTGGAGCCATTTCGCCAAGGGACAACTACGCGTCAGTCAGAAGAGAGAACCGAGAGCTGAAGCTTGAAGTTGCGAGAATGCGGATGAGGCTGACAGACTTAGAAAAAGATCATGTTTCTATGAAACAAGAGCTTGTGAAGTCACATCCTGCAAACAAGCTGTTCAAATCGTTCACCAAAAAGTTGGGGAAGCTCAATGCATTGTTCAAGATCAATAGTATCAAGCCTTTAGGGGGGAAGGCGCATTCGGAGTCCAGATTTCCGTTCCAGAAGCGAAGGCGCCATTCGGTTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

634

Amino Acids

70.53

Weight (kDa)

9.0

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	211 - 480	6.3e-90	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03010 AT1G03010 AT1G03010
fragaria_vesca	FvH4_2g24980 FvH4_2g24980
malus_domestica	MD03G1278600.v1.1 MD03G1278700.v1.1 MD11G1301000.v1.1
prunus_persica	Prupe.8G254800_v2.0.a1 Prupe.8G254800_v2.0.a1 Prupe.8G254800_v2.0.a1
pyrus_communis	pycom03g22180 pycom11g26390
rosa_chinensis	RchiOBHm_Chr6g0292951
rosa_laevigata	RLG00000011979
rosa_roxburghii	Rroxscaffold_7G00174540
rosa_rugosa	Rorug06G0231100 Rorug06G0231200 Rorug06G0231300 Rorug06G0231400 Rorug06G0231400 Rorug06G0231400 Rorug06G0231500
rosa_samantha	Rh6AG344100 Rh6BG351500 Rh6CG358600 Rh6DG344300
rosa_wichuraiana	Rw6G030040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1884
AccB7I	CCANNNNNTGG	1 cut(s)	90
AccI	GTMKAC	1 cut(s)	947
AccII	CGCG	4 cut(s)	229, 681, 692, 1637
AccIII	TCCGGA	1 cut(s)	1300
AciI	CCGC	7 cut(s)	49, 627, 690, 692, 976, 1393, 1687
AclWI	GGATC	5 cut(s)	845, 954, 1002, 1091, 1189
AcoI	YGGCCR	2 cut(s)	92, 1534
AcsI	RAATTY	2 cut(s)	732, 1030
AcuI	CTGAAG	5 cut(s)	47, 423, 434, 1226, 1685
AcyI	GRCGYC	1 cut(s)	1885
AfaI	GTAC	2 cut(s)	1473, 1570
AfeI	AGCGCT	1 cut(s)	648
AfiI	CCNNNNNNNGG	7 cut(s)	48, 75, 90, 633, 1024, 1342, 1838
AflIII	ACRYGT	2 cut(s)	679, 1635
AhdI	GACNNNNNGTC	1 cut(s)	773
AjnI	CCWGG	2 cut(s)	354, 1177
AjuI	GAANNNNNNNTTGG	2 cut(s)	963, 995
Alw21I	GWGCWC	2 cut(s)	604, 1494
Alw26I	GTCTC	2 cut(s)	187, 413
AlwI	GGATC	5 cut(s)	845, 954, 1002, 1091, 1189
AlwNI	CAGNNNCTG	1 cut(s)	1073
Aor13HI	TCCGGA	1 cut(s)	1300
Aor51HI	AGCGCT	1 cut(s)	648
AoxI	GGCC	3 cut(s)	6, 92, 1534
ApeKI	GCWGC	7 cut(s)	278, 465, 485, 550, 935, 988, 1448
ApoI	RAATTY	2 cut(s)	732, 1030
AspLEI	GCGC	6 cut(s)	231, 349, 649, 1453, 1849, 1887
AspS9I	GGNCC	3 cut(s)	6, 257, 1303
AsuC2I	CCSGG	2 cut(s)	43, 252
AsuHPI	GGTGA	6 cut(s)	4, 32, 547, 706, 805, 1771
AsuNHI	GCTAGC	1 cut(s)	274
AvaII	GGWCC	2 cut(s)	257, 1303
BalI	TGGCCA	2 cut(s)	94, 1536
BanI	GGYRCC	1 cut(s)	1884
BanII	GRGCYC	1 cut(s)	604
BbsI	GAAGAC	1 cut(s)	1017
Bbv12I	GWGCWC	2 cut(s)	604, 1494
BbvCI	CCTCAGC	1 cut(s)	1581
BbvI	GCAGC	7 cut(s)	265, 452, 497, 562, 947, 1000, 1460
BccI	CCATC	3 cut(s)	1319, 1415, 1471
BceAI	ACGGC	1 cut(s)	1252
BcgI	CGANNNNNNTGC	8 cut(s)	207, 241, 1236, 1246, 1270, 1280, 1390, 1424
BciT130I	CCWGG	2 cut(s)	356, 1179
BclI	TGATCA	1 cut(s)	723
BcnI	CCSGG	2 cut(s)	43, 252
BcoDI	GTCTC	2 cut(s)	187, 413
BfaI	CTAG	6 cut(s)	33, 111, 167, 275, 1223, 1286
BfmI	CTRYAG	3 cut(s)	852, 986, 1438
BfoI	RGCGCY	2 cut(s)	650, 1888
BisI	GCNGC	7 cut(s)	279, 466, 486, 551, 936, 989, 1449
BlpI	GCTNAGC	1 cut(s)	659
BlsI	GCNGC	7 cut(s)	280, 467, 487, 552, 937, 990, 1450
Bme1390I	CCNGG	4 cut(s)	43, 252, 356, 1179
Bme18I	GGWCC	2 cut(s)	257, 1303
BmeRI	GACNNNNNGTC	1 cut(s)	773
BmgT120I	GGNCC	3 cut(s)	6, 257, 1303
BmiI	GGNNCC	4 cut(s)	7, 615, 1612, 1886
BmrFI	CCNGG	4 cut(s)	43, 252, 356, 1179
BmsI	GCATC	6 cut(s)	146, 205, 947, 1060, 1254, 1372
BmtI	GCTAGC	1 cut(s)	278
BpiI	GAAGAC	1 cut(s)	1017
Bpu10I	CCTNAGC	1 cut(s)	1581
Bpu1102I	GCTNAGC	1 cut(s)	659
BpuEI	CTTGAG	2 cut(s)	1159, 1358
BpuMI	CCSGG	2 cut(s)	43, 252
BsaHI	GRCGYC	1 cut(s)	1885
BsaJI	CCNNGG	4 cut(s)	690, 702, 1177, 1622
BsaWI	WCCGGW	1 cut(s)	1300
BsaXI	ACNNNNNCTCC	2 cut(s)	288, 318
Bsc4I	CCNNNNNNNGG	7 cut(s)	48, 75, 90, 633, 1024, 1342, 1838
Bse1I	ACTGG	4 cut(s)	638, 890, 1469, 1543
Bse3DI	GCAATG	1 cut(s)	1530
BseAI	TCCGGA	1 cut(s)	1300
BseBI	CCWGG	2 cut(s)	356, 1179
BseDI	CCNNGG	4 cut(s)	690, 702, 1177, 1622
BseGI	GGATG	6 cut(s)	1014, 1114, 1120, 1363, 1695, 1750
BseLI	CCNNNNNNNGG	7 cut(s)	48, 75, 90, 633, 1024, 1342, 1838
BseMI	GCAATG	1 cut(s)	1530
BseMII	CTCAG	3 cut(s)	369, 1528, 1595
BseNI	ACTGG	4 cut(s)	638, 890, 1469, 1543
BseXI	GCAGC	7 cut(s)	265, 452, 497, 562, 947, 1000, 1460
BsgI	GTGCAG	1 cut(s)	1620
Bsh1236I	CGCG	4 cut(s)	229, 681, 692, 1637
Bsh1285I	CGRYCG	1 cut(s)	53
BshFI	GGCC	3 cut(s)	8, 94, 1536
BshNI	GGYRCC	1 cut(s)	1884
BsiEI	CGRYCG	1 cut(s)	53
BsiHKAI	GWGCWC	2 cut(s)	604, 1494
BsiSI	CCGG	4 cut(s)	42, 251, 1025, 1301
BslFI	GGGAC	2 cut(s)	1157, 1640
BslI	CCNNNNNNNGG	7 cut(s)	48, 75, 90, 633, 1024, 1342, 1838
BsmAI	GTCTC	2 cut(s)	187, 413
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	2 cut(s)	1157, 1640
BsmI	GAATGC	2 cut(s)	1689, 1849
BsnI	GGCC	3 cut(s)	8, 94, 1536
Bsp1286I	GDGCHC	2 cut(s)	604, 1494
Bsp13I	TCCGGA	1 cut(s)	1300
Bsp1720I	GCTNAGC	1 cut(s)	659
BspACI	CCGC	7 cut(s)	49, 627, 690, 692, 976, 1393, 1687
BspANI	GGCC	3 cut(s)	8, 94, 1536
BspCNI	CTCAG	3 cut(s)	370, 1527, 1594
BspEI	TCCGGA	1 cut(s)	1300
BspFNI	CGCG	4 cut(s)	229, 681, 692, 1637
BspHI	TCATGA	1 cut(s)	1898
BspLI	GGNNCC	4 cut(s)	7, 615, 1612, 1886
BspMAI	CTGCAG	2 cut(s)	990, 1442
BspOI	GCTAGC	1 cut(s)	278
BspPI	GGATC	5 cut(s)	845, 954, 1002, 1091, 1189
BspT107I	GGYRCC	1 cut(s)	1884
BsrDI	GCAATG	1 cut(s)	1530
BsrI	ACTGG	4 cut(s)	638, 890, 1469, 1543
BssECI	CCNNGG	4 cut(s)	690, 702, 1177, 1622
BssNI	GRCGYC	1 cut(s)	1885
BssT1I	CCWWGG	2 cut(s)	702, 1622
Bst2UI	CCWGG	2 cut(s)	356, 1179
Bst4CI	ACNGT	6 cut(s)	124, 198, 424, 655, 1532, 1568
Bst6I	CTCTTC	4 cut(s)	363, 765, 878, 1642
BstACI	GRCGYC	1 cut(s)	1885
BstAPI	GCANNNNNTGC	3 cut(s)	215, 536, 1244
BstC8I	GCNNGC	8 cut(s)	81, 276, 483, 512, 541, 627, 1438, 1603
BstDEI	CTNAG	6 cut(s)	174, 378, 659, 1514, 1581, 1705
BstDSI	CCRYGG	1 cut(s)	690
BstF5I	GGATG	6 cut(s)	1014, 1114, 1120, 1363, 1695, 1750
BstFNI	CGCG	4 cut(s)	229, 681, 692, 1637
BstH2I	RGCGCY	2 cut(s)	650, 1888
BstHHI	GCGC	6 cut(s)	231, 349, 649, 1453, 1849, 1887
BstMAI	GTCTC	2 cut(s)	187, 413
BstMCI	CGRYCG	1 cut(s)	53
BstMWI	GCNNNNNNNGC	9 cut(s)	215, 536, 599, 655, 935, 941, 1244, 1510, 1693
BstNI	CCWGG	2 cut(s)	356, 1179
BstNSI	RCATGY	2 cut(s)	83, 543
BstSCI	CCNGG	4 cut(s)	41, 250, 354, 1177
BstSFI	CTRYAG	3 cut(s)	852, 986, 1438
BstUI	CGCG	4 cut(s)	229, 681, 692, 1637
BstV1I	GCAGC	7 cut(s)	265, 452, 497, 562, 947, 1000, 1460
BstV2I	GAAGAC	1 cut(s)	1017
BstX2I	RGATCY	3 cut(s)	959, 1083, 1181
BstXI	CCANNNNNNTGG	1 cut(s)	1789
BstYI	RGATCY	3 cut(s)	959, 1083, 1181
BsuRI	GGCC	3 cut(s)	8, 94, 1536
BtgI	CCRYGG	1 cut(s)	690
BtgZI	GCGATG	1 cut(s)	446
BtsCI	GGATG	6 cut(s)	1014, 1114, 1120, 1363, 1695, 1750
BtsI	GCAGTG	3 cut(s)	588, 1600, 1612
BtsIMutI	CAGTG	5 cut(s)	84, 588, 660, 1600, 1612
Cac8I	GCNNGC	8 cut(s)	81, 276, 483, 512, 541, 627, 1438, 1603
CaiI	CAGNNNCTG	1 cut(s)	1073
CciI	TCATGA	1 cut(s)	1898
CfoI	GCGC	6 cut(s)	231, 349, 649, 1453, 1849, 1887
Cfr13I	GGNCC	3 cut(s)	6, 257, 1303
Cfr42I	CCGCGG	1 cut(s)	693
CseI	GACGC	2 cut(s)	933, 1626
Csp6I	GTAC	2 cut(s)	1472, 1569
CviAII	CATG	8 cut(s)	80, 302, 331, 540, 1037, 1307, 1718, 1899
CviQI	GTAC	2 cut(s)	1472, 1569
DdeI	CTNAG	6 cut(s)	174, 378, 659, 1514, 1581, 1705
DinI	GGCGCC	1 cut(s)	1886
DriI	GACNNNNNGTC	1 cut(s)	773
EaeI	YGGCCR	2 cut(s)	92, 1534
Eam1104I	CTCTTC	4 cut(s)	363, 765, 878, 1642
Eam1105I	GACNNNNNGTC	1 cut(s)	773
EarI	CTCTTC	4 cut(s)	363, 765, 878, 1642
EciI	GGCGGA	1 cut(s)	991
Ecl136II	GAGCTC	1 cut(s)	602
Eco130I	CCWWGG	2 cut(s)	702, 1622
Eco24I	GRGCYC	1 cut(s)	604
Eco32I	GATATC	2 cut(s)	450, 1348
Eco47I	GGWCC	2 cut(s)	257, 1303
Eco47III	AGCGCT	1 cut(s)	648
Eco53kI	GAGCTC	1 cut(s)	602
Eco57I	CTGAAG	5 cut(s)	47, 423, 434, 1226, 1685
EcoICRI	GAGCTC	1 cut(s)	602
EcoRII	CCWGG	2 cut(s)	354, 1177
EcoRV	GATATC	2 cut(s)	450, 1348
EcoT14I	CCWWGG	2 cut(s)	702, 1622
EcoT22I	ATGCAT	2 cut(s)	541, 1807
EcoT38I	GRGCYC	1 cut(s)	604
EgeI	GGCGCC	1 cut(s)	1886
EheI	GGCGCC	1 cut(s)	1886
ErhI	CCWWGG	2 cut(s)	702, 1622
Esp3I	CGTCTC	1 cut(s)	413
FaeI	CATG	8 cut(s)	83, 305, 334, 543, 1040, 1310, 1721, 1902
FaqI	GGGAC	2 cut(s)	1157, 1640
FatI	CATG	8 cut(s)	79, 301, 330, 539, 1036, 1306, 1717, 1898
FauI	CCCGC	1 cut(s)	634
FbaI	TGATCA	1 cut(s)	723
FblI	GTMKAC	1 cut(s)	947
Fnu4HI	GCNGC	7 cut(s)	279, 466, 486, 551, 936, 989, 1449
FokI	GGATG	6 cut(s)	1001, 1121, 1127, 1350, 1702, 1737
FriOI	GRGCYC	1 cut(s)	604
Fsp4HI	GCNGC	7 cut(s)	279, 466, 486, 551, 936, 989, 1449
FspBI	CTAG	6 cut(s)	33, 111, 167, 275, 1223, 1286
GlaI	GCGC	6 cut(s)	230, 348, 648, 1452, 1848, 1886
GluI	GCNGC	7 cut(s)	279, 466, 486, 551, 936, 989, 1449
HaeII	RGCGCY	2 cut(s)	650, 1888
HaeIII	GGCC	3 cut(s)	8, 94, 1536
HapII	CCGG	4 cut(s)	42, 251, 1025, 1301
HgaI	GACGC	2 cut(s)	933, 1626
HhaI	GCGC	6 cut(s)	231, 349, 649, 1453, 1849, 1887
Hin1I	GRCGYC	1 cut(s)	1885
Hin1II	CATG	8 cut(s)	83, 305, 334, 543, 1040, 1310, 1721, 1902
Hin6I	GCGC	6 cut(s)	229, 347, 647, 1451, 1847, 1885
HinP1I	GCGC	6 cut(s)	229, 347, 647, 1451, 1847, 1885
HindIII	AAGCTT	3 cut(s)	142, 405, 1667
HinfI	GANTC	7 cut(s)	187, 886, 1021, 1253, 1329, 1379, 1856
HpaII	CCGG	4 cut(s)	42, 251, 1025, 1301
HphI	GGTGA	6 cut(s)	4, 32, 547, 706, 805, 1771
Hpy166II	GTNNAC	5 cut(s)	23, 257, 948, 1571, 1779
Hpy188III	TCNNGA	8 cut(s)	1007, 1018, 1204, 1301, 1813, 1860, 1873, 1899
Hpy8I	GTNNAC	5 cut(s)	23, 257, 948, 1571, 1779
HpyAV	CCTTC	5 cut(s)	177, 409, 1201, 1837, 1875
HpyCH4III	ACNGT	6 cut(s)	124, 198, 424, 655, 1532, 1568
HpyF10VI	GCNNNNNNNGC	9 cut(s)	215, 536, 599, 655, 935, 941, 1244, 1510, 1693
HpyF3I	CTNAG	6 cut(s)	174, 378, 659, 1514, 1581, 1705
Hsp92I	GRCGYC	1 cut(s)	1885
Hsp92II	CATG	8 cut(s)	83, 305, 334, 543, 1040, 1310, 1721, 1902
HspAI	GCGC	6 cut(s)	229, 347, 647, 1451, 1847, 1885
KasI	GGCGCC	1 cut(s)	1884
Kpn2I	TCCGGA	1 cut(s)	1300
Ksp22I	TGATCA	1 cut(s)	723
KspI	CCGCGG	1 cut(s)	693
LmnI	GCTCC	4 cut(s)	134, 599, 607, 1610
Lsp1109I	GCAGC	7 cut(s)	265, 452, 497, 562, 947, 1000, 1460
LweI	GCATC	6 cut(s)	146, 205, 947, 1060, 1254, 1372
MaeI	CTAG	6 cut(s)	33, 111, 167, 275, 1223, 1286
MaeIII	GTNAC	4 cut(s)	10, 290, 1442, 1746
MfeI	CAATTG	2 cut(s)	525, 788
MflI	RGATCY	3 cut(s)	959, 1083, 1181
MhlI	GDGCHC	2 cut(s)	604, 1494
MlsI	TGGCCA	2 cut(s)	94, 1536
MluI	ACGCGT	2 cut(s)	679, 1635
MluNI	TGGCCA	2 cut(s)	94, 1536
Mly113I	GGCGCC	1 cut(s)	1885
MlyI	GAGTC	5 cut(s)	895, 1247, 1323, 1373, 1865
MmeI	TCCRAC	2 cut(s)	700, 893
Mox20I	TGGCCA	2 cut(s)	94, 1536
Mph1103I	ATGCAT	2 cut(s)	541, 1807
MroI	TCCGGA	1 cut(s)	1300
MscI	TGGCCA	2 cut(s)	94, 1536
MseI	TTAA	4 cut(s)	711, 737, 741, 1319
Msp20I	TGGCCA	2 cut(s)	94, 1536
MspA1I	CMGCKG	2 cut(s)	692, 991
MspI	CCGG	4 cut(s)	42, 251, 1025, 1301
MspR9I	CCNGG	4 cut(s)	43, 252, 356, 1179
MunI	CAATTG	2 cut(s)	525, 788
Mva1269I	GAATGC	2 cut(s)	1689, 1849
MvaI	CCWGG	2 cut(s)	356, 1179
MvnI	CGCG	4 cut(s)	229, 681, 692, 1637
MwoI	GCNNNNNNNGC	9 cut(s)	215, 536, 599, 655, 935, 941, 1244, 1510, 1693
NarI	GGCGCC	1 cut(s)	1885
NciI	CCSGG	2 cut(s)	43, 252
NheI	GCTAGC	1 cut(s)	274
NlaIII	CATG	8 cut(s)	83, 305, 334, 543, 1040, 1310, 1721, 1902
NlaIV	GGNNCC	4 cut(s)	7, 615, 1612, 1886
NmuCI	GTSAC	3 cut(s)	10, 1442, 1746
NsiI	ATGCAT	2 cut(s)	541, 1807
NspI	RCATGY	2 cut(s)	83, 543
PacI	TTAATTAA	1 cut(s)	741
PaeI	GCATGC	2 cut(s)	83, 543
PagI	TCATGA	1 cut(s)	1898
PcsI	WCGNNNNNNNCGW	1 cut(s)	59
PctI	GAATGC	2 cut(s)	1689, 1849
PfeI	GAWTC	2 cut(s)	187, 1021
PflMI	CCANNNNNTGG	1 cut(s)	90
PfoI	TCCNGGA	2 cut(s)	41, 354
PkrI	GCNGC	7 cut(s)	280, 467, 487, 552, 937, 990, 1450
PleI	GAGTC	5 cut(s)	894, 1247, 1323, 1373, 1864
PluTI	GGCGCC	1 cut(s)	1888
PpsI	GAGTC	5 cut(s)	894, 1247, 1323, 1373, 1864
Psp124BI	GAGCTC	1 cut(s)	604
Psp6I	CCWGG	2 cut(s)	354, 1177
PspGI	CCWGG	2 cut(s)	354, 1177
PspN4I	GGNNCC	4 cut(s)	7, 615, 1612, 1886
PspPI	GGNCC	3 cut(s)	6, 257, 1303
PstI	CTGCAG	2 cut(s)	990, 1442
PstNI	CAGNNNCTG	1 cut(s)	1073
PsuI	RGATCY	3 cut(s)	959, 1083, 1181
PvuII	CAGCTG	1 cut(s)	991
RsaI	GTAC	2 cut(s)	1473, 1570
RsaNI	GTAC	2 cut(s)	1472, 1569
SacI	GAGCTC	1 cut(s)	604
SacII	CCGCGG	1 cut(s)	693
SaqAI	TTAA	4 cut(s)	711, 737, 741, 1319
SatI	GCNGC	7 cut(s)	279, 466, 486, 551, 936, 989, 1449
Sau96I	GGNCC	3 cut(s)	6, 257, 1303
SchI	GAGTC	5 cut(s)	895, 1247, 1323, 1373, 1865
ScrFI	CCNGG	4 cut(s)	43, 252, 356, 1179
SduI	GDGCHC	2 cut(s)	604, 1494
SfaNI	GCATC	6 cut(s)	146, 205, 947, 1060, 1254, 1372
SfcI	CTRYAG	3 cut(s)	852, 986, 1438
SfoI	GGCGCC	1 cut(s)	1886
Sfr303I	CCGCGG	1 cut(s)	693
SgrBI	CCGCGG	1 cut(s)	693
SinI	GGWCC	2 cut(s)	257, 1303
SmlI	CTYRAG	2 cut(s)	1138, 1373
SmoI	CTYRAG	2 cut(s)	1138, 1373
SphI	GCATGC	2 cut(s)	83, 543
SsiI	CCGC	7 cut(s)	49, 627, 690, 692, 976, 1393, 1687
SspDI	GGCGCC	1 cut(s)	1884
SspI	AATATT	1 cut(s)	1317
SspMI	CTAG	6 cut(s)	33, 111, 167, 275, 1223, 1286
SstI	GAGCTC	1 cut(s)	604
StyD4I	CCNGG	4 cut(s)	41, 250, 354, 1177
StyI	CCWWGG	2 cut(s)	702, 1622
TaaI	ACNGT	6 cut(s)	124, 198, 424, 655, 1532, 1568
TatI	WGTACW	1 cut(s)	1471
TfiI	GAWTC	2 cut(s)	187, 1021
Tru1I	TTAA	4 cut(s)	711, 737, 741, 1319
Tru9I	TTAA	4 cut(s)	711, 737, 741, 1319
TscAI	CASTG	5 cut(s)	91, 595, 660, 1600, 1612
TseFI	GTSAC	3 cut(s)	10, 1442, 1746
TseI	GCWGC	7 cut(s)	278, 465, 485, 550, 935, 988, 1448
Tsp45I	GTSAC	3 cut(s)	10, 1442, 1746
TspDTI	ATGAA	7 cut(s)	290, 449, 1140, 1267, 1541, 1742, 1887
TspGWI	ACGGA	3 cut(s)	309, 380, 1857
TspRI	CASTG	5 cut(s)	91, 595, 660, 1600, 1612
Van91I	CCANNNNNTGG	1 cut(s)	90
VpaK11BI	GGWCC	2 cut(s)	257, 1303
XapI	RAATTY	2 cut(s)	732, 1030
XceI	RCATGY	2 cut(s)	83, 543
XmiI	GTMKAC	1 cut(s)	947
XspI	CTAG	6 cut(s)	33, 111, 167, 275, 1223, 1286
Zsp2I	ATGCAT	2 cut(s)	541, 1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.