Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007584

Physical Location & Seq

Genomic Coordinates Reverse (-)

20947267 .. 20955496

Gene Structure 8230 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g26000.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGGCGAATCGCCCTAAGCTCACCCGAATACCGAGCATGAGGGATCGCGTGGAGGACACTCTCTCCGCTCACCGCAACGAAATCGTGGCGCTCCTTTCCAGGTATGTGGCTCAAGGAAAAGGGATACTGCAACCGCATGACCTGCTCGACGAGCTTGAGAAGCTGATCACTGATGACGAAGCGAGGCTGGCGCTCAGCGAAGGTCCTTTTGGTGAAGTCCTCAAGTCAGCACAGGAAGCCATTATTCACCCTCCATTTGTGGCTCTAGCAGTTCGTCCAAGACCAGGTGTATGGGAATTTGTTCGTGTTAACGTAAATGAGCTCAGTGTGGAACAATTGAGTGTTTCTGAATATCTTAGCTTTAAAGAAGAACTTGTAGATGGGAGGTCCAATGACAGATATGTTCTTGAGCTCGATTTTGAGCCATTCAACGCTAATTTTCCTCGTCCAACCCGGTCATCATCCATTGGGAATGGTGTTCAATTCCTCAACCGCCACCTTTCTTCAATTATGTTCCGTAACAAAGAATCTTTGGAGCCATTAGTGGATTTCCTTAGAGCACATACATATAAAGGGCATGCGCTGATGTTGAATGATCGGATACAGAGCATACCCAAGCTTCAGTCAGCTTTGGTTAAGGCTGAGGATAAACTTTCCAAACTTCCAACTGAGACACCCTATTCTGAGTTTGAATATGTATTACAAGGATTGGGTTTTGAGCGAGGTTGGGGAGACACTGCAGAACATGTATTGGAGATGATGCATCTTCTCCTAGATACCCTACAGGCTCCTGATCCTTCTACCTTGGAGACATTTCTTGGGAGAGTACCTATGGTCTTTAATGTTGTCATTTTATCTCCTCATGGATACTTTGGGCAAGCAAATGTCTTAGGCTTACCTGACACTGGTGGACAGGTTGTCTATATACTGGACCAAGTGCGTGCCCTCGAGAATGAAATGATTCGTAGAATTAAGAGGCAAGGATTAAACTTCACTCCAAGAATCCTTATTGTCACCAGGCTAATTCCTGATGCCAAAGGAACTACATGCAACCAGCGGCTAGAAAGAGTCACTGGAACAGAGCATAGCCATATTTTGCGAGTTCCTTTTAGATCAGAGAATGGAATTCTTCGTAAATGGATCTCAAGGTTTGATGTATGGCCTTATTTGGAGACCTTTGCTGAGGATGTTGCAGGTGAAATTACTGCCGAGTTACAGGGACATCCAGATTTTATTATTGGAAATTACAGTGATGGAAATCTCGTCGCCTCGTTGTTGGCTTATAAAATGGGAGTTACCCAGTGCACCATTGCGCATGCTTTGGAGAAAACAAAATATCCGGATTCAGATATCTACTGGAAAAAATACGATGAGAAATATCACTTCTCCTGTCAATTCACTGCTGACCTTATAGCCATGAACAATGCAGATTTTATAATCACCAGCACATACCAAGAGATTGCGGGAACGAAGAATACTGTTGGACAATATGAGAGTCACAGCTCTTTCACTCTTCCGGGGCTGTACCGTGTTGTTCATGGCATTAATGTTTTTGATCCAAAGTTCAATATAGTGTCTCCTGGAGCGGATATGAGCATTTATTTCCCTTACTTTGATAAGGAAAAGAGACTTACATCCCTCCATGGTTCCATTGAGAAGTTGCTTTTTGATCCTGAGCAGAATGATGAGCACATTGGTCTTCTGAATGATCCATCAAAGCCCATCTTATTTTCCATGGCAAGGCTGGACCACGTGAAAAACCTGACTGGGTTGGTTGAGTCCTATGCTAAGAATGCCAAACTAAGGGAACTGGTAAACCTTGTTTTGGTTGCTGGTTATAATGATGTGAAGAAGTCAAACGATAGAGAAGAGATTGTAGAGATTGAAAAGTTGCATGCTCTCATTAAGGAGTACAACTTGAATGGTCAGTTTCGATGGTTATCTTCCCAAACTAATCGAGCACGTAATGGTGAGCTATATCGTTATGTTGCAGATAATGGAGGTGCTTTTGTTCAGCCTGCACTTTATGAAGCCTTTGGACTCACAGTTGTGGAGGCCATGACTTGTGGCCTTCCAACATTTGCCACAATCCATGGTGGTCCTGCAGAAATTATCGAGCATGGCATATCTGGATTTCATATCGACCCTTATCACTCCGAACAGATGGCTGCTCTTATGGCCGATTTCTTTCAACGTAGCAAGGATGATCCTAGCCACTGGAAGAGAATATCAGATGGAGGCCTGAAAAGAATTTATGAAAGGTACACATGGAACATTTATTCTGAAAGGCTAATGACACTGACCGGTGTTTACGGTTTCTGGAAGTATGTCTCAAAGCTTGAAAGGCTTGAGACCAGGCGATATCTCGAGATGTTCTACATTCTGCAGTTCCGTGATTTGGTTAAAACTGTTCCTCGTGCAGTAGATGATCCACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0006073 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009311 GO:0009414 GO:0009415 GO:0009628 GO:0009743 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010154 GO:0010431 GO:0010555 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0035251 GO:0042221 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0046527 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071695 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

813

Amino Acids

92.64

Weight (kDa)

5.94

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	10 - 123	2.4e-49	Sucrose synthase N-terminal
SUS_EPBD	PF24862	158 - 245	1e-33	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	268 - 556	3.1e-169	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	567 - 733	1.4e-27	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	574 - 728	5.7e-13	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02280
fragaria_vesca	FvH4_2g26000 FvH4_2g26000
malus_domestica	MD11G1307000.v1.1
prunus_persica	Prupe.8G264300_v2.0.a1
pyrus_communis	pycom11g26860
rosa_chinensis	RchiOBHm_Chr3g0465391 RchiOBHm_Chr6g0294361
rosa_laevigata	RLG00000011877
rosa_multiflora	Rmu_co8254571.1_g000001 Rmu_sc0005369.1_g000012 Rmu_sc0016833.1_g000001
rosa_roxburghii	Rroxscaffold_7G00173440
rosa_rugosa	Rorug03G0273600 Rorug06G0243800
rosa_samantha	Rh2AG100600 Rh3BG141500 Rh3CG142600 Rh3DG142600 Rh6AG356400 Rh6BG363100 Rh6CG370400 Rh6DG356900
rosa_wichuraiana	Rw6G031060

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1284, 1436, 1839
AarI	CACCTGC	1 cut(s)	1184
Acc16I	TGCGCA	1 cut(s)	1314
Acc36I	ACCTGC	2 cut(s)	150, 1184
AccBSI	CCGCTC	2 cut(s)	68, 1586
AccII	CGCG	1 cut(s)	48
AccIII	TCCGGA	1 cut(s)	1339
AciI	CCGC	7 cut(s)	66, 73, 134, 493, 1057, 1463, 1586
AclWI	GGATC	8 cut(s)	51, 788, 1148, 1550, 1664, 1703, 2201, 2423
AcoI	YGGCCR	1 cut(s)	2178
AcsI	RAATTY	3 cut(s)	296, 1125, 2250
AcuI	CTGAAG	1 cut(s)	605
AcvI	CACGTG	1 cut(s)	1753
AfaI	GTAC	4 cut(s)	828, 1526, 1913, 2264
AfiI	CCNNNNNNNGG	6 cut(s)	284, 905, 1740, 1803, 1825, 2398
AflIII	ACRYGT	1 cut(s)	745
AgeI	ACCGGT	1 cut(s)	2303
AhdI	GACNNNNNGTC	1 cut(s)	917
AjnI	CCWGG	5 cut(s)	98, 283, 1016, 1579, 2354
AjuI	GAANNNNNNNTTGG	2 cut(s)	192, 224
AleI	CACNNNNGTG	1 cut(s)	2048
Alw21I	GWGCWC	6 cut(s)	324, 414, 562, 1307, 1692, 1963
Alw26I	GTCTC	8 cut(s)	665, 726, 803, 1166, 1581, 1621, 2335, 2345
Alw44I	GTGCAC	1 cut(s)	1303
AlwI	GGATC	8 cut(s)	51, 788, 1148, 1550, 1664, 1703, 2201, 2423
Ama87I	CYCGRG	2 cut(s)	947, 2366
Aor13HI	TCCGGA	1 cut(s)	1339
AoxI	GGCC	5 cut(s)	1160, 2055, 2068, 2178, 2239
ApaLI	GTGCAC	1 cut(s)	1303
ApeKI	GCWGC	1 cut(s)	2168
ApoI	RAATTY	3 cut(s)	296, 1125, 2250
AseI	ATTAAT	1 cut(s)	1545
AsiGI	ACCGGT	1 cut(s)	2303
Asp700I	GAANNNNTTC	2 cut(s)	300, 960
AspLEI	GCGC	4 cut(s)	91, 193, 583, 1315
AspS9I	GGNCC	5 cut(s)	203, 387, 931, 1747, 2099
AsuC2I	CCSGG	2 cut(s)	454, 1518
AsuHPI	GGTGA	8 cut(s)	13, 62, 224, 239, 1006, 1208, 1432, 1982
AvaI	CYCGRG	2 cut(s)	947, 2366
AvaII	GGWCC	5 cut(s)	203, 387, 931, 1747, 2099
BaeGI	GKGCMC	2 cut(s)	946, 1307
BanII	GRGCYC	2 cut(s)	324, 414
BauI	CACGAG	1 cut(s)	2415
BbrPI	CACGTG	1 cut(s)	1753
BbsI	GAAGAC	1 cut(s)	1691
Bbv12I	GWGCWC	6 cut(s)	324, 414, 562, 1307, 1692, 1963
BbvCI	CCTCAGC	2 cut(s)	642, 1182
BbvI	GCAGC	1 cut(s)	2155
BccI	CCATC	7 cut(s)	374, 1247, 1720, 1730, 1929, 2158, 2228
BcgI	CGANNNNNNTGC	2 cut(s)	64, 98
BciT130I	CCWGG	5 cut(s)	100, 285, 1018, 1581, 2356
BciVI	GTATCC	3 cut(s)	117, 594, 860
BclI	TGATCA	1 cut(s)	165
BcnI	CCSGG	2 cut(s)	454, 1518
BcoDI	GTCTC	8 cut(s)	665, 726, 803, 1166, 1581, 1621, 2335, 2345
BfaI	CTAG	4 cut(s)	266, 773, 1061, 2211
BfmI	CTRYAG	4 cut(s)	738, 782, 2103, 2384
BfoI	RGCGCY	2 cut(s)	92, 194
BfuAI	ACCTGC	2 cut(s)	150, 1184
BfuI	GTATCC	3 cut(s)	117, 594, 860
BisI	GCNGC	2 cut(s)	1058, 2169
BlpI	GCTNAGC	1 cut(s)	194
BlsI	GCNGC	2 cut(s)	1059, 2170
Bme1390I	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2356
Bme18I	GGWCC	5 cut(s)	203, 387, 931, 1747, 2099
BmeRI	GACNNNNNGTC	1 cut(s)	917
BmeT110I	CYCGRG	2 cut(s)	947, 2366
BmgT120I	GGNCC	5 cut(s)	203, 387, 931, 1747, 2099
BmiI	GGNNCC	3 cut(s)	537, 789, 1648
BmrFI	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2356
BmrI	ACTGGG	2 cut(s)	1294, 1776
BmsI	GCATC	3 cut(s)	750, 772, 1021
BmuI	ACTGGG	2 cut(s)	1294, 1776
BpiI	GAAGAC	1 cut(s)	1691
BpmI	CTGGAG	1 cut(s)	1602
Bpu10I	CCTNAGC	4 cut(s)	15, 642, 1182, 1674
Bpu1102I	GCTNAGC	1 cut(s)	194
BpuEI	CTTGAG	6 cut(s)	96, 176, 206, 428, 1129, 2369
BpuMI	CCSGG	2 cut(s)	454, 1518
BsaAI	YACGTR	2 cut(s)	1753, 1964
BsaBI	GATNNNNATC	2 cut(s)	1257, 1939
BsaI	GGTCTC	2 cut(s)	1166, 2345
BsaJI	CCNNGG	5 cut(s)	804, 1517, 1642, 1734, 2092
BsaWI	WCCGGW	2 cut(s)	1339, 2303
BsaXI	ACNNNNNCTCC	2 cut(s)	47, 77
Bsc4I	CCNNNNNNNGG	6 cut(s)	284, 905, 1740, 1803, 1825, 2398
Bse118I	RCCGGY	1 cut(s)	2303
Bse1I	ACTGG	8 cut(s)	910, 933, 1078, 1300, 1361, 1771, 1815, 2222
Bse3DI	GCAATG	1 cut(s)	1308
Bse8I	GATNNNNATC	2 cut(s)	1257, 1939
BseAI	TCCGGA	1 cut(s)	1339
BseBI	CCWGG	5 cut(s)	100, 285, 1018, 1581, 2356
BseDI	CCNNGG	5 cut(s)	804, 1517, 1642, 1734, 2092
BseGI	GGATG	5 cut(s)	461, 1192, 1222, 1634, 2209
BseJI	GATNNNNATC	2 cut(s)	1257, 1939
BseLI	CCNNNNNNNGG	6 cut(s)	284, 905, 1740, 1803, 1825, 2398
BseMI	GCAATG	1 cut(s)	1308
BseMII	CTCAG	7 cut(s)	208, 337, 633, 660, 675, 1173, 1665
BseNI	ACTGG	8 cut(s)	910, 933, 1078, 1300, 1361, 1771, 1815, 2222
BseRI	GAGGAG	1 cut(s)	849
BseSI	GKGCMC	2 cut(s)	946, 1307
BseXI	GCAGC	1 cut(s)	2155
BsgI	GTGCAG	2 cut(s)	2004, 2439
Bsh1236I	CGCG	1 cut(s)	48
BshFI	GGCC	5 cut(s)	1162, 2057, 2070, 2180, 2241
BshTI	ACCGGT	1 cut(s)	2303
BsiHKAI	GWGCWC	6 cut(s)	324, 414, 562, 1307, 1692, 1963
BsiHKCI	CYCGRG	2 cut(s)	947, 2366
BsiSI	CCGG	4 cut(s)	454, 1340, 1517, 2304
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	6 cut(s)	284, 905, 1740, 1803, 1825, 2398
BsmAI	GTCTC	8 cut(s)	665, 726, 803, 1166, 1581, 1621, 2335, 2345
BsmFI	GGGAC	1 cut(s)	1233
BsmI	GAATGC	1 cut(s)	1798
BsnI	GGCC	5 cut(s)	1162, 2057, 2070, 2180, 2241
Bso31I	GGTCTC	2 cut(s)	1166, 2345
BsoBI	CYCGRG	2 cut(s)	947, 2366
Bsp1286I	GDGCHC	7 cut(s)	324, 414, 562, 946, 1307, 1692, 1963
Bsp13I	TCCGGA	1 cut(s)	1339
Bsp1720I	GCTNAGC	1 cut(s)	194
Bsp19I	CCATGG	3 cut(s)	1642, 1734, 2092
BspACI	CCGC	7 cut(s)	66, 73, 134, 493, 1057, 1463, 1586
BspANI	GGCC	5 cut(s)	1162, 2057, 2070, 2180, 2241
BspCNI	CTCAG	7 cut(s)	207, 336, 634, 661, 676, 1174, 1666
BspEI	TCCGGA	1 cut(s)	1339
BspFNI	CGCG	1 cut(s)	48
BspLI	GGNNCC	3 cut(s)	537, 789, 1648
BspMAI	CTGCAG	3 cut(s)	742, 2107, 2388
BspMI	ACCTGC	2 cut(s)	150, 1184
BspPI	GGATC	8 cut(s)	51, 788, 1148, 1550, 1664, 1703, 2201, 2423
BspTNI	GGTCTC	2 cut(s)	1166, 2345
BsrBI	CCGCTC	2 cut(s)	68, 1586
BsrDI	GCAATG	1 cut(s)	1308
BsrFI	RCCGGY	1 cut(s)	2303
BsrI	ACTGG	8 cut(s)	910, 933, 1078, 1300, 1361, 1771, 1815, 2222
BssAI	RCCGGY	1 cut(s)	2303
BssECI	CCNNGG	5 cut(s)	804, 1517, 1642, 1734, 2092
BssSI	CACGAG	1 cut(s)	2415
BssT1I	CCWWGG	4 cut(s)	804, 1642, 1734, 2092
Bst2BI	CACGAG	1 cut(s)	2415
Bst2UI	CCWGG	5 cut(s)	100, 285, 1018, 1581, 2356
Bst4CI	ACNGT	6 cut(s)	1250, 1480, 1529, 2047, 2315, 2410
Bst6I	CTCTTC	3 cut(s)	1518, 1863, 2216
BstAPI	GCANNNNNTGC	1 cut(s)	142
BstBAI	YACGTR	2 cut(s)	1753, 1964
BstC8I	GCNNGC	7 cut(s)	189, 579, 879, 942, 1317, 1896, 2019
BstDSI	CCRYGG	3 cut(s)	1642, 1734, 2092
BstF5I	GGATG	5 cut(s)	461, 1192, 1222, 1634, 2209
BstFNI	CGCG	1 cut(s)	48
BstH2I	RGCGCY	2 cut(s)	92, 194
BstHHI	GCGC	4 cut(s)	91, 193, 583, 1315
BstMAI	GTCTC	8 cut(s)	665, 726, 803, 1166, 1581, 1621, 2335, 2345
BstMWI	GCNNNNNNNGC	8 cut(s)	142, 151, 160, 188, 236, 1793, 2177, 2344
BstNI	CCWGG	5 cut(s)	100, 285, 1018, 1581, 2356
BstNSI	RCATGY	5 cut(s)	581, 749, 1050, 1319, 1898
BstSCI	CCNGG	7 cut(s)	98, 283, 452, 1016, 1516, 1579, 2354
BstSFI	CTRYAG	4 cut(s)	738, 782, 2103, 2384
BstSLI	GKGCMC	2 cut(s)	946, 1307
BstUI	CGCG	1 cut(s)	48
BstV1I	GCAGC	1 cut(s)	2155
BstV2I	GAAGAC	1 cut(s)	1691
BstX2I	RGATCY	1 cut(s)	1140
BstXI	CCANNNNNNTGG	2 cut(s)	106, 291
BstYI	RGATCY	1 cut(s)	1140
BsuI	GTATCC	3 cut(s)	117, 594, 860
BsuRI	GGCC	5 cut(s)	1162, 2057, 2070, 2180, 2241
BtgI	CCRYGG	3 cut(s)	1642, 1734, 2092
BtsCI	GGATG	5 cut(s)	461, 1192, 1222, 1634, 2209
BtsI	GCAGTG	2 cut(s)	735, 1398
BveI	ACCTGC	2 cut(s)	150, 1184
Cac8I	GCNNGC	7 cut(s)	189, 579, 879, 942, 1317, 1896, 2019
CfoI	GCGC	4 cut(s)	91, 193, 583, 1315
Cfr10I	RCCGGY	1 cut(s)	2303
Cfr13I	GGNCC	5 cut(s)	203, 387, 931, 1747, 2099
CsiI	ACCWGGT	1 cut(s)	283
Csp6I	GTAC	4 cut(s)	827, 1525, 1912, 2263
CspAI	ACCGGT	1 cut(s)	2303
CviQI	GTAC	4 cut(s)	827, 1525, 1912, 2263
DraI	TTTAAA	1 cut(s)	364
DriI	GACNNNNNGTC	1 cut(s)	917
EaeI	YGGCCR	1 cut(s)	2178
Eam1104I	CTCTTC	3 cut(s)	1518, 1863, 2216
Eam1105I	GACNNNNNGTC	1 cut(s)	917
EarI	CTCTTC	3 cut(s)	1518, 1863, 2216
Ecl136II	GAGCTC	2 cut(s)	322, 412
Eco130I	CCWWGG	4 cut(s)	804, 1642, 1734, 2092
Eco147I	AGGCCT	1 cut(s)	2241
Eco24I	GRGCYC	2 cut(s)	324, 414
Eco31I	GGTCTC	2 cut(s)	1166, 2345
Eco32I	GATATC	2 cut(s)	1351, 2363
Eco47I	GGWCC	5 cut(s)	203, 387, 931, 1747, 2099
Eco53kI	GAGCTC	2 cut(s)	322, 412
Eco57I	CTGAAG	1 cut(s)	605
Eco72I	CACGTG	1 cut(s)	1753
Eco88I	CYCGRG	2 cut(s)	947, 2366
EcoICRI	GAGCTC	2 cut(s)	322, 412
EcoO109I	RGGNCCY	1 cut(s)	203
EcoRI	GAATTC	1 cut(s)	1125
EcoRII	CCWGG	5 cut(s)	98, 283, 1016, 1579, 2354
EcoRV	GATATC	2 cut(s)	1351, 2363
EcoT14I	CCWWGG	4 cut(s)	804, 1642, 1734, 2092
EcoT22I	ATGCAT	1 cut(s)	765
EcoT38I	GRGCYC	2 cut(s)	324, 414
ErhI	CCWWGG	4 cut(s)	804, 1642, 1734, 2092
FalI	AAGNNNNNCTT	4 cut(s)	357, 389, 1709, 1741
FaqI	GGGAC	1 cut(s)	1233
FauI	CCCGC	1 cut(s)	1456
FbaI	TGATCA	1 cut(s)	165
Fnu4HI	GCNGC	2 cut(s)	1058, 2169
FokI	GGATG	5 cut(s)	448, 1199, 1209, 1621, 2216
FriOI	GRGCYC	2 cut(s)	324, 414
Fsp4HI	GCNGC	2 cut(s)	1058, 2169
FspBI	CTAG	4 cut(s)	266, 773, 1061, 2211
FspI	TGCGCA	1 cut(s)	1314
GlaI	GCGC	4 cut(s)	90, 192, 582, 1314
GluI	GCNGC	2 cut(s)	1058, 2169
GsuI	CTGGAG	1 cut(s)	1602
HaeII	RGCGCY	2 cut(s)	92, 194
HaeIII	GGCC	5 cut(s)	1162, 2057, 2070, 2180, 2241
HapII	CCGG	4 cut(s)	454, 1340, 1517, 2304
HhaI	GCGC	4 cut(s)	91, 193, 583, 1315
Hin6I	GCGC	4 cut(s)	89, 191, 581, 1313
HinP1I	GCGC	4 cut(s)	89, 191, 581, 1313
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	2 cut(s)	617, 2336
HinfI	GANTC	9 cut(s)	7, 527, 961, 1002, 1068, 1343, 1495, 1778, 2040
HpaI	GTTAAC	1 cut(s)	310
HpaII	CCGG	4 cut(s)	454, 1340, 1517, 2304
HphI	GGTGA	8 cut(s)	13, 62, 224, 239, 1006, 1208, 1432, 1982
Hpy166II	GTNNAC	6 cut(s)	310, 911, 1305, 1816, 2265, 2311
Hpy188I	TCNGA	9 cut(s)	349, 600, 685, 1117, 1348, 1704, 2158, 2233, 2284
Hpy8I	GTNNAC	6 cut(s)	310, 911, 1305, 1816, 2265, 2311
Hpy99I	CGWCG	2 cut(s)	152, 1268
HpyAV	CCTTC	3 cut(s)	194, 807, 2081
HpyCH4III	ACNGT	6 cut(s)	1250, 1480, 1529, 2047, 2315, 2410
HpyCH4IV	ACGT	4 cut(s)	312, 1752, 1963, 2194
HpyF10VI	GCNNNNNNNGC	8 cut(s)	142, 151, 160, 188, 236, 1793, 2177, 2344
HpySE526I	ACGT	4 cut(s)	312, 1752, 1963, 2194
HspAI	GCGC	4 cut(s)	89, 191, 581, 1313
Kpn2I	TCCGGA	1 cut(s)	1339
Ksp22I	TGATCA	1 cut(s)	165
KspAI	GTTAAC	1 cut(s)	310
LmnI	GCTCC	4 cut(s)	96, 535, 793, 1583
Lsp1109I	GCAGC	1 cut(s)	2155
LweI	GCATC	3 cut(s)	750, 772, 1021
MabI	ACCWGGT	1 cut(s)	283
MaeI	CTAG	4 cut(s)	266, 773, 1061, 2211
MaeII	ACGT	4 cut(s)	312, 1752, 1963, 2194
MaeIII	GTNAC	6 cut(s)	518, 1012, 1069, 1212, 1294, 1496
MbiI	CCGCTC	2 cut(s)	68, 1586
MfeI	CAATTG	1 cut(s)	335
MflI	RGATCY	1 cut(s)	1140
MhlI	GDGCHC	7 cut(s)	324, 414, 562, 946, 1307, 1692, 1963
MlyI	GAGTC	4 cut(s)	1077, 1504, 1787, 2034
MmeI	TCCRAC	4 cut(s)	473, 689, 1462, 2099
Mph1103I	ATGCAT	1 cut(s)	765
MroI	TCCGGA	1 cut(s)	1339
MroXI	GAANNNNTTC	2 cut(s)	300, 960
MslI	CAYNNNNRTG	1 cut(s)	2048
MspA1I	CMGCKG	1 cut(s)	1057
MspI	CCGG	4 cut(s)	454, 1340, 1517, 2304
MspR9I	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2356
MunI	CAATTG	1 cut(s)	335
Mva1269I	GAATGC	1 cut(s)	1798
MvaI	CCWGG	5 cut(s)	100, 285, 1018, 1581, 2356
MvnI	CGCG	1 cut(s)	48
MwoI	GCNNNNNNNGC	8 cut(s)	142, 151, 160, 188, 236, 1793, 2177, 2344
NciI	CCSGG	2 cut(s)	454, 1518
NcoI	CCATGG	3 cut(s)	1642, 1734, 2092
NlaIV	GGNNCC	3 cut(s)	537, 789, 1648
NmeAIII	GCCGAG	1 cut(s)	1234
NmuCI	GTSAC	3 cut(s)	1012, 1069, 1496
NsbI	TGCGCA	1 cut(s)	1314
NsiI	ATGCAT	1 cut(s)	765
NspI	RCATGY	5 cut(s)	581, 749, 1050, 1319, 1898
OliI	CACNNNNGTG	1 cut(s)	2048
PaeI	GCATGC	3 cut(s)	581, 1319, 1898
PaeR7I	CTCGAG	2 cut(s)	947, 2366
PaqCI	CACCTGC	1 cut(s)	1184
PceI	AGGCCT	1 cut(s)	2241
PciI	ACATGT	1 cut(s)	745
PctI	GAATGC	1 cut(s)	1798
PdmI	GAANNNNTTC	2 cut(s)	300, 960
PfeI	GAWTC	5 cut(s)	7, 527, 961, 1002, 1343
PfoI	TCCNGGA	1 cut(s)	1579
PinAI	ACCGGT	1 cut(s)	2303
PkrI	GCNGC	2 cut(s)	1059, 2170
PleI	GAGTC	4 cut(s)	1076, 1503, 1786, 2034
PmaCI	CACGTG	1 cut(s)	1753
PmlI	CACGTG	1 cut(s)	1753
PpsI	GAGTC	4 cut(s)	1076, 1503, 1786, 2034
Ppu21I	YACGTR	2 cut(s)	1753, 1964
PpuMI	RGGWCCY	1 cut(s)	203
PscI	ACATGT	1 cut(s)	745
PshBI	ATTAAT	1 cut(s)	1545
PsiI	TTATAA	3 cut(s)	1284, 1436, 1839
Psp124BI	GAGCTC	2 cut(s)	324, 414
Psp5II	RGGWCCY	1 cut(s)	203
Psp6I	CCWGG	5 cut(s)	98, 283, 1016, 1579, 2354
PspCI	CACGTG	1 cut(s)	1753
PspGI	CCWGG	5 cut(s)	98, 283, 1016, 1579, 2354
PspN4I	GGNNCC	3 cut(s)	537, 789, 1648
PspPI	GGNCC	5 cut(s)	203, 387, 931, 1747, 2099
PspPPI	RGGWCCY	1 cut(s)	203
PsrI	GAACNNNNNNTAC	2 cut(s)	1459, 1491
PstI	CTGCAG	3 cut(s)	742, 2107, 2388
PsuI	RGATCY	1 cut(s)	1140
RsaI	GTAC	4 cut(s)	828, 1526, 1913, 2264
RsaNI	GTAC	4 cut(s)	827, 1525, 1912, 2263
RseI	CAYNNNNRTG	1 cut(s)	2048
SacI	GAGCTC	2 cut(s)	324, 414
SatI	GCNGC	2 cut(s)	1058, 2169
Sau96I	GGNCC	5 cut(s)	203, 387, 931, 1747, 2099
SchI	GAGTC	4 cut(s)	1077, 1504, 1787, 2034
ScrFI	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2356
SduI	GDGCHC	7 cut(s)	324, 414, 562, 946, 1307, 1692, 1963
SexAI	ACCWGGT	1 cut(s)	283
SfaNI	GCATC	3 cut(s)	750, 772, 1021
SfcI	CTRYAG	4 cut(s)	738, 782, 2103, 2384
Sfr274I	CTCGAG	2 cut(s)	947, 2366
SinI	GGWCC	5 cut(s)	203, 387, 931, 1747, 2099
SlaI	CTCGAG	2 cut(s)	947, 2366
SmiMI	CAYNNNNRTG	1 cut(s)	2048
SmlI	CTYRAG	8 cut(s)	111, 155, 221, 407, 947, 1144, 2348, 2366
SmoI	CTYRAG	8 cut(s)	111, 155, 221, 407, 947, 1144, 2348, 2366
SphI	GCATGC	3 cut(s)	581, 1319, 1898
SseBI	AGGCCT	1 cut(s)	2241
SsiI	CCGC	7 cut(s)	66, 73, 134, 493, 1057, 1463, 1586
SspMI	CTAG	4 cut(s)	266, 773, 1061, 2211
SstI	GAGCTC	2 cut(s)	324, 414
StuI	AGGCCT	1 cut(s)	2241
StyD4I	CCNGG	7 cut(s)	98, 283, 452, 1016, 1516, 1579, 2354
StyI	CCWWGG	4 cut(s)	804, 1642, 1734, 2092
TaaI	ACNGT	6 cut(s)	1250, 1480, 1529, 2047, 2315, 2410
TaiI	ACGT	4 cut(s)	315, 1755, 1966, 2197
TaqI	TCGA	8 cut(s)	147, 414, 948, 1933, 1957, 2115, 2142, 2367
TatI	WGTACW	1 cut(s)	1911
TauI	GCSGC	1 cut(s)	1060
TfiI	GAWTC	5 cut(s)	7, 527, 961, 1002, 1343
TseFI	GTSAC	3 cut(s)	1012, 1069, 1496
TseI	GCWGC	1 cut(s)	2168
Tsp45I	GTSAC	3 cut(s)	1012, 1069, 1496
TspDTI	ATGAA	6 cut(s)	969, 1433, 1526, 2043, 2126, 2271
TspGWI	ACGGA	2 cut(s)	506, 2381
VneI	GTGCAC	1 cut(s)	1303
VpaK11BI	GGWCC	5 cut(s)	203, 387, 931, 1747, 2099
VspI	ATTAAT	1 cut(s)	1545
XapI	RAATTY	3 cut(s)	296, 1125, 2250
XceI	RCATGY	5 cut(s)	581, 749, 1050, 1319, 1898
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1741
XhoI	CTCGAG	2 cut(s)	947, 2366
XmnI	GAANNNNTTC	2 cut(s)	300, 960
XspI	CTAG	4 cut(s)	266, 773, 1061, 2211
Zsp2I	ATGCAT	1 cut(s)	765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.