Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007584

Physical Location & Seq

Genomic Coordinates Forward (+)

13477811 .. 13483072

Gene Structure 5262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011877

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCGAATCGCGCTAAGCTGACTCGTATACCGAGCATGAGAGATCGCGTGGAGGACACGCTCTCCGCTCACCGCAACGAAATCGTTGCGCTTCTCTCCAGGTATGTGGCTCAAGGAAAAGGGATACTGCAACCGCATGACCTGATCGATGAGCTCGAGAAAGTGATCACTGATGACAAAGCGAGGCTGAAGCTCAGCGAAGGTCCTTTTAGTGAAGTCCTCAAGTCGGCACAGGAAGCCATTATATATCCTCCATTTGTGGCTCTAGCAGTTCGTCCAAGGCCAGGTGTATGGGAATTCGTTCGTGTTAATGTAAATGAGCTGACTGTGGAACAATTGAGTATTTCTGAATATCTTGGCTTTAAAGAAGAACTTGTGGATGGGAAGTCTAATGACAGATTTGTACTTGAGCTCGATTTTGAGCCATTCAACGCTAATTTTCCTCGTCCCACCCGGTCATCATCCATTGGGAATGGCGTTCAATTCCTCAACCGCCACCTTTCTTCAATTATGTTCCGTAACAAAGACTGTTTGGAGCCATTACTTGATTTCCTTAGAGCGCACACATATAAAGGGCATGCGCTGATGTTGAATGATCGGATACAGAGCATATCCAAGCTTCAGGCAGCTTTGGTTAAGGCCGAGGATAATCTTTCTAAACTTCCATCTGAGACACCCTATTCTGAGTTTGAATATGTATTACAAGGATTGGGTTTTGAGCGAGGTTGGGGAGACACTGCAGAACACGTATTGGAGATGATGCATCTTCTCCTAGATATCCTACAGGCTCCTGATCCTACAACCTTGGAGACATTTCTAGGGAGAGTACCAATGGTTTTTAATGTTGTCATTTTGTCTCCACATGGATACTTTGGGCAAGCAAATGTCTTAGGCTTACCCGACACTGGTGGGCAGGTTGTCTATATACTGGACCAAGTGCGTGCCCTCGAGAATGAAATGCTTCAAAGAATTAAGAGGCAAGGATTAAACTTCACTCCAAGAATCCTTATTGTAACCAGGCTAATACCTGATGCCAAGGGAACTACATGCAACCAGCGGCTAGAAAGAGTCACTGGAACAGAGCACAGCCATATTTTGCGAGTTCCTTTCAGATCAGAGAATGGTATTCTTCGTAAATGGATATCAAGGTTTGATGTATGGCCTTATTTGGAGACCTTTGCTGAGGATGTTGCAGGTGAAATTACTGCCGAGTTACAGGGACATCCAGATTTTATTATTGGAAATTACAGTGATGGAAATCTTGTTGCCTCTTTGTTGGCATATAAAATGGGGGTTACACAGTGCACTATCGCGCATGCTTTGGAGAAAACAAAATATCCGGATTCAGATATCTACTGGAAAAAATACGATGAGAAATATCACTTCTCATGTCAATTCACAGCTGACCTTATAGCCATGAACAGTGCAGATTTTATAATCACCAGCACATACCAAGAGATTGCGGGAACGAAGAATACTGTTGGACAGTATGAGAGCCATAGCTCTTTCACTCTTCCAGGGCTGTACCGTGTTGTTCATGGCATTAATGTTTTTGATCCAAAGTTCAATATTGTGTCTCCTGGAGCTGATATGAGCATTTATTTCCCTTACTATGAAAAGGAAAAGAGACTTACATCCCTCCATGGTTCCATTGAGAAGTTGCTTTATGATCCTGAGCAGAATGATGAGCACATTGGTCTTCTGAAGGATCGATCAAAGCCCATCTTATTTTCCATGGCAAGGCTGGACCAGCCTGCACTTTATGAAGCTTTTGGACTCACAGTTGTGGAGGCCATGACTTGTGGCCTTCCGACATTTGCCACAATCCATGGTGGTCCTGCAGAGATCATTGAGCACGGTATATCCGGATTTCATATCGACCCTTATCACTCTGAACAGATGGCTGCAATTATGGCTGATTTCTTTCAACGGAGTAAGGAGGATTCTAGCTACTGGAAGAAAATTGCAGATGGGGGCCTGAAAAGAATTTTTGAAAGGTACACATGGAACATTTATTCTGAAAGGCTAATGACATTGGCCGGTGTTTACGGTTTCTGGAAGTATGTGTCAAAGCTTGATAGGCTTGAGACCAGGCGATATCTCGAGATGTTCTACATTCTGAAGTTCCGCGATTTGGTTAAAACTGTTCCTGAGGCAAGAGATGATCCACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0006073 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009311 GO:0009414 GO:0009415 GO:0009628 GO:0009743 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010154 GO:0010431 GO:0010555 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0035251 GO:0042221 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0046527 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071695 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

725

Amino Acids

82.63

Weight (kDa)

5.86

Isoelectric Point (pI)

36.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	10 - 123	8.1e-49	Sucrose synthase N-terminal
SUS_EPBD	PF24862	158 - 245	1.2e-33	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	268 - 556	2.6e-170	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	573 - 653	1.8e-15	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	585 - 640	1.3e-09	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02280
fragaria_vesca	FvH4_2g26000 FvH4_2g26000
malus_domestica	MD11G1307000.v1.1
prunus_persica	Prupe.8G264300_v2.0.a1
pyrus_communis	pycom11g26860
rosa_chinensis	RchiOBHm_Chr3g0465391 RchiOBHm_Chr6g0294361
rosa_laevigata	RLG00000011877
rosa_multiflora	Rmu_co8254571.1_g000001 Rmu_sc0005369.1_g000012 Rmu_sc0016833.1_g000001
rosa_roxburghii	Rroxscaffold_7G00173440
rosa_rugosa	Rorug03G0273600 Rorug06G0243800
rosa_samantha	Rh2AG100600 Rh3BG141500 Rh3CG142600 Rh3DG142600 Rh6AG356400 Rh6BG363100 Rh6CG370400 Rh6DG356900
rosa_wichuraiana	Rw6G031060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1436
AarI	CACCTGC	1 cut(s)	1184
Acc36I	ACCTGC	2 cut(s)	904, 1184
AccBSI	CCGCTC	1 cut(s)	68
AccI	GTMKAC	1 cut(s)	28
AccII	CGCG	4 cut(s)	12, 48, 1313, 2130
AccIII	TCCGGA	2 cut(s)	1339, 1865
AciI	CCGC	7 cut(s)	66, 73, 134, 493, 1057, 1463, 2128
AclWI	GGATC	5 cut(s)	788, 1550, 1664, 1716, 2159
AcoI	YGGCCR	1 cut(s)	2037
AcsI	RAATTY	2 cut(s)	296, 1986
AcuI	CTGAAG	4 cut(s)	209, 605, 1724, 2141
AfaI	GTAC	4 cut(s)	405, 828, 1526, 2000
AfiI	CCNNNNNNNGG	5 cut(s)	226, 284, 905, 1740, 2134
AflIII	ACRYGT	1 cut(s)	745
AgsI	TTSAA	9 cut(s)	430, 482, 507, 592, 692, 965, 1567, 1928, 1994
AjnI	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 2090
AleI	CACNNNNGTG	1 cut(s)	1784
Alw21I	GWGCWC	6 cut(s)	156, 414, 1086, 1307, 1692, 1857
Alw26I	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2081
Alw44I	GTGCAC	1 cut(s)	1303
AlwI	GGATC	5 cut(s)	788, 1550, 1664, 1716, 2159
Ama87I	CYCGRG	3 cut(s)	155, 947, 2102
Aor13HI	TCCGGA	2 cut(s)	1339, 1865
AoxI	GGCC	7 cut(s)	281, 639, 1160, 1791, 1804, 1975, 2037
ApaLI	GTGCAC	1 cut(s)	1303
ApeKI	GCWGC	2 cut(s)	626, 1904
ApoI	RAATTY	2 cut(s)	296, 1986
AseI	ATTAAT	1 cut(s)	1545
Asp700I	GAANNNNTTC	2 cut(s)	300, 960
AspLEI	GCGC	5 cut(s)	14, 91, 562, 583, 1315
AspS9I	GGNCC	5 cut(s)	203, 931, 1747, 1835, 1975
AsuC2I	CCSGG	1 cut(s)	454
AsuHPI	GGTGA	3 cut(s)	62, 1208, 1432
AvaI	CYCGRG	3 cut(s)	155, 947, 2102
AvaII	GGWCC	4 cut(s)	203, 931, 1747, 1835
AxyI	CCTNAGG	1 cut(s)	2151
BaeGI	GKGCMC	2 cut(s)	946, 1307
BanII	GRGCYC	2 cut(s)	156, 414
BbsI	GAAGAC	1 cut(s)	1691
Bbv12I	GWGCWC	6 cut(s)	156, 414, 1086, 1307, 1692, 1857
BbvCI	CCTCAGC	1 cut(s)	1182
BbvI	GCAGC	2 cut(s)	638, 1891
BccI	CCATC	6 cut(s)	374, 673, 1247, 1730, 1894, 1964
BcgI	CGANNNNNNTGC	4 cut(s)	64, 68, 98, 102
BciT130I	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 2092
BciVI	GTATCC	3 cut(s)	117, 594, 860
BclI	TGATCA	1 cut(s)	165
BcnI	CCSGG	1 cut(s)	454
BcoDI	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2081
BfaI	CTAG	5 cut(s)	266, 773, 818, 1061, 1947
BfmI	CTRYAG	3 cut(s)	738, 782, 1839
BfuAI	ACCTGC	2 cut(s)	904, 1184
BfuI	GTATCC	3 cut(s)	117, 594, 860
BisI	GCNGC	3 cut(s)	627, 1058, 1905
BlpI	GCTNAGC	2 cut(s)	15, 194
BlsI	GCNGC	3 cut(s)	628, 1059, 1906
Bme1390I	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2092
Bme18I	GGWCC	4 cut(s)	203, 931, 1747, 1835
BmeT110I	CYCGRG	3 cut(s)	155, 947, 2102
BmgT120I	GGNCC	5 cut(s)	203, 931, 1747, 1835, 1975
BmiI	GGNNCC	4 cut(s)	537, 789, 1648, 1976
BmrFI	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2092
BmsI	GCATC	3 cut(s)	750, 772, 1021
BpiI	GAAGAC	1 cut(s)	1691
BpmI	CTGGAG	2 cut(s)	82, 1602
Bpu10I	CCTNAGC	2 cut(s)	1182, 1674
Bpu1102I	GCTNAGC	2 cut(s)	15, 194
BpuEI	CTTGAG	4 cut(s)	96, 206, 428, 2105
BpuMI	CCSGG	1 cut(s)	454
Bsa29I	ATCGAT	2 cut(s)	147, 1711
BsaAI	YACGTR	1 cut(s)	748
BsaBI	GATNNNNATC	1 cut(s)	1257
BsaI	GGTCTC	2 cut(s)	1166, 2081
BsaJI	CCNNGG	8 cut(s)	278, 642, 804, 1035, 1517, 1642, 1734, 1828
BsaWI	WCCGGW	2 cut(s)	1339, 1865
BsaXI	ACNNNNNCTCC	2 cut(s)	47, 77
Bsc4I	CCNNNNNNNGG	5 cut(s)	226, 284, 905, 1740, 2134
Bse118I	RCCGGY	1 cut(s)	2039
Bse1I	ACTGG	5 cut(s)	910, 933, 1078, 1361, 1958
Bse21I	CCTNAGG	1 cut(s)	2151
Bse8I	GATNNNNATC	1 cut(s)	1257
BseAI	TCCGGA	2 cut(s)	1339, 1865
BseBI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 2092
BseCI	ATCGAT	2 cut(s)	147, 1711
BseDI	CCNNGG	8 cut(s)	278, 642, 804, 1035, 1517, 1642, 1734, 1828
BseGI	GGATG	5 cut(s)	385, 461, 1192, 1222, 1634
BseJI	GATNNNNATC	1 cut(s)	1257
BseLI	CCNNNNNNNGG	5 cut(s)	226, 284, 905, 1740, 2134
BseMII	CTCAG	6 cut(s)	208, 660, 675, 1173, 1665, 2142
BseNI	ACTGG	5 cut(s)	910, 933, 1078, 1361, 1958
BseSI	GKGCMC	2 cut(s)	946, 1307
BseXI	GCAGC	2 cut(s)	638, 1891
BsgI	GTGCAG	2 cut(s)	1446, 1740
Bsh1236I	CGCG	4 cut(s)	12, 48, 1313, 2130
BshFI	GGCC	7 cut(s)	283, 641, 1162, 1793, 1806, 1977, 2039
BshVI	ATCGAT	2 cut(s)	147, 1711
BsiHKAI	GWGCWC	6 cut(s)	156, 414, 1086, 1307, 1692, 1857
BsiHKCI	CYCGRG	3 cut(s)	155, 947, 2102
BsiSI	CCGG	4 cut(s)	454, 1340, 1866, 2040
BslFI	GGGAC	2 cut(s)	432, 1233
BslI	CCNNNNNNNGG	5 cut(s)	226, 284, 905, 1740, 2134
BsmAI	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2081
BsmFI	GGGAC	2 cut(s)	432, 1233
BsnI	GGCC	7 cut(s)	283, 641, 1162, 1793, 1806, 1977, 2039
Bso31I	GGTCTC	2 cut(s)	1166, 2081
BsoBI	CYCGRG	3 cut(s)	155, 947, 2102
Bsp1286I	GDGCHC	7 cut(s)	156, 414, 946, 1086, 1307, 1692, 1857
Bsp13I	TCCGGA	2 cut(s)	1339, 1865
Bsp1720I	GCTNAGC	2 cut(s)	15, 194
Bsp19I	CCATGG	3 cut(s)	1642, 1734, 1828
BspACI	CCGC	7 cut(s)	66, 73, 134, 493, 1057, 1463, 2128
BspANI	GGCC	7 cut(s)	283, 641, 1162, 1793, 1806, 1977, 2039
BspCNI	CTCAG	6 cut(s)	207, 661, 676, 1174, 1666, 2143
BspDI	ATCGAT	2 cut(s)	147, 1711
BspEI	TCCGGA	2 cut(s)	1339, 1865
BspFNI	CGCG	4 cut(s)	12, 48, 1313, 2130
BspLI	GGNNCC	4 cut(s)	537, 789, 1648, 1976
BspMAI	CTGCAG	2 cut(s)	742, 1843
BspMI	ACCTGC	2 cut(s)	904, 1184
BspPI	GGATC	5 cut(s)	788, 1550, 1664, 1716, 2159
BspTNI	GGTCTC	2 cut(s)	1166, 2081
BsrBI	CCGCTC	1 cut(s)	68
BsrFI	RCCGGY	1 cut(s)	2039
BsrI	ACTGG	5 cut(s)	910, 933, 1078, 1361, 1958
BssAI	RCCGGY	1 cut(s)	2039
BssECI	CCNNGG	8 cut(s)	278, 642, 804, 1035, 1517, 1642, 1734, 1828
BssNAI	GTATAC	1 cut(s)	29
BssT1I	CCWWGG	6 cut(s)	278, 804, 1035, 1642, 1734, 1828
Bst1107I	GTATAC	1 cut(s)	29
Bst2UI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 2092
Bst6I	CTCTTC	1 cut(s)	1518
BstBAI	YACGTR	1 cut(s)	748
BstC8I	GCNNGC	5 cut(s)	579, 879, 942, 1317, 1755
BstDEI	CTNAG	9 cut(s)	15, 194, 554, 669, 684, 889, 1182, 1674, 2151
BstDSI	CCRYGG	3 cut(s)	1642, 1734, 1828
BstF5I	GGATG	5 cut(s)	385, 461, 1192, 1222, 1634
BstFNI	CGCG	4 cut(s)	12, 48, 1313, 2130
BstHHI	GCGC	5 cut(s)	14, 91, 562, 583, 1315
BstMAI	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2081
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 236, 1750, 1913, 2080
BstNI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 2092
BstNSI	RCATGY	3 cut(s)	581, 1050, 1319
BstSCI	CCNGG	7 cut(s)	98, 283, 452, 1016, 1516, 1579, 2090
BstSFI	CTRYAG	3 cut(s)	738, 782, 1839
BstSLI	GKGCMC	2 cut(s)	946, 1307
BstUI	CGCG	4 cut(s)	12, 48, 1313, 2130
BstV1I	GCAGC	2 cut(s)	638, 1891
BstV2I	GAAGAC	1 cut(s)	1691
BstXI	CCANNNNNNTGG	2 cut(s)	106, 291
BstZ17I	GTATAC	1 cut(s)	29
Bsu15I	ATCGAT	2 cut(s)	147, 1711
Bsu36I	CCTNAGG	1 cut(s)	2151
BsuI	GTATCC	3 cut(s)	117, 594, 860
BsuRI	GGCC	7 cut(s)	283, 641, 1162, 1793, 1806, 1977, 2039
BsuTUI	ATCGAT	2 cut(s)	147, 1711
BtgI	CCRYGG	3 cut(s)	1642, 1734, 1828
BtsCI	GGATG	5 cut(s)	385, 461, 1192, 1222, 1634
BtsI	GCAGTG	1 cut(s)	735
BtsIMutI	CAGTG	7 cut(s)	168, 735, 903, 1071, 1255, 1307, 1429
BveI	ACCTGC	2 cut(s)	904, 1184
Cac8I	GCNNGC	5 cut(s)	579, 879, 942, 1317, 1755
CfoI	GCGC	5 cut(s)	14, 91, 562, 583, 1315
Cfr10I	RCCGGY	1 cut(s)	2039
Cfr13I	GGNCC	5 cut(s)	203, 931, 1747, 1835, 1975
ClaI	ATCGAT	2 cut(s)	147, 1711
Csp6I	GTAC	4 cut(s)	404, 827, 1525, 1999
CviQI	GTAC	4 cut(s)	404, 827, 1525, 1999
DdeI	CTNAG	9 cut(s)	15, 194, 554, 669, 684, 889, 1182, 1674, 2151
DraI	TTTAAA	1 cut(s)	364
EaeI	YGGCCR	1 cut(s)	2037
Eam1104I	CTCTTC	1 cut(s)	1518
EarI	CTCTTC	1 cut(s)	1518
Ecl136II	GAGCTC	2 cut(s)	154, 412
Eco130I	CCWWGG	6 cut(s)	278, 804, 1035, 1642, 1734, 1828
Eco24I	GRGCYC	2 cut(s)	156, 414
Eco31I	GGTCTC	2 cut(s)	1166, 2081
Eco32I	GATATC	4 cut(s)	778, 1143, 1351, 2099
Eco47I	GGWCC	4 cut(s)	203, 931, 1747, 1835
Eco53kI	GAGCTC	2 cut(s)	154, 412
Eco57I	CTGAAG	4 cut(s)	209, 605, 1724, 2141
Eco81I	CCTNAGG	1 cut(s)	2151
Eco88I	CYCGRG	3 cut(s)	155, 947, 2102
EcoICRI	GAGCTC	2 cut(s)	154, 412
EcoO109I	RGGNCCY	2 cut(s)	203, 1975
EcoRI	GAATTC	1 cut(s)	296
EcoRII	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 2090
EcoRV	GATATC	4 cut(s)	778, 1143, 1351, 2099
EcoT14I	CCWWGG	6 cut(s)	278, 804, 1035, 1642, 1734, 1828
EcoT22I	ATGCAT	1 cut(s)	765
EcoT38I	GRGCYC	2 cut(s)	156, 414
ErhI	CCWWGG	6 cut(s)	278, 804, 1035, 1642, 1734, 1828
FalI	AAGNNNNNCTT	4 cut(s)	357, 389, 1709, 1741
FaqI	GGGAC	2 cut(s)	432, 1233
FauI	CCCGC	1 cut(s)	1456
FbaI	TGATCA	1 cut(s)	165
FblI	GTMKAC	1 cut(s)	28
Fnu4HI	GCNGC	3 cut(s)	627, 1058, 1905
FokI	GGATG	5 cut(s)	392, 448, 1199, 1209, 1621
FriOI	GRGCYC	2 cut(s)	156, 414
Fsp4HI	GCNGC	3 cut(s)	627, 1058, 1905
FspBI	CTAG	5 cut(s)	266, 773, 818, 1061, 1947
GlaI	GCGC	5 cut(s)	13, 90, 561, 582, 1314
GluI	GCNGC	3 cut(s)	627, 1058, 1905
GsuI	CTGGAG	2 cut(s)	82, 1602
HaeIII	GGCC	7 cut(s)	283, 641, 1162, 1793, 1806, 1977, 2039
HapII	CCGG	4 cut(s)	454, 1340, 1866, 2040
HhaI	GCGC	5 cut(s)	14, 91, 562, 583, 1315
Hin6I	GCGC	5 cut(s)	12, 89, 560, 581, 1313
HinP1I	GCGC	5 cut(s)	12, 89, 560, 581, 1313
HindIII	AAGCTT	3 cut(s)	617, 1767, 2072
HinfI	GANTC	7 cut(s)	7, 22, 1002, 1068, 1343, 1776, 1943
HpaII	CCGG	4 cut(s)	454, 1340, 1866, 2040
HphI	GGTGA	3 cut(s)	62, 1208, 1432
Hpy166II	GTNNAC	4 cut(s)	29, 1305, 2001, 2047
Hpy8I	GTNNAC	4 cut(s)	29, 1305, 2001, 2047
HpyAV	CCTTC	3 cut(s)	194, 1699, 1817
HpyCH4IV	ACGT	1 cut(s)	747
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 236, 1750, 1913, 2080
HpyF3I	CTNAG	9 cut(s)	15, 194, 554, 669, 684, 889, 1182, 1674, 2151
HpySE526I	ACGT	1 cut(s)	747
HspAI	GCGC	5 cut(s)	12, 89, 560, 581, 1313
Kpn2I	TCCGGA	2 cut(s)	1339, 1865
Ksp22I	TGATCA	1 cut(s)	165
LmnI	GCTCC	3 cut(s)	535, 793, 1583
Lsp1109I	GCAGC	2 cut(s)	638, 1891
LweI	GCATC	3 cut(s)	750, 772, 1021
MaeI	CTAG	5 cut(s)	266, 773, 818, 1061, 1947
MaeII	ACGT	1 cut(s)	747
MaeIII	GTNAC	5 cut(s)	518, 1012, 1069, 1212, 1294
MbiI	CCGCTC	1 cut(s)	68
MboII	GAAGA	8 cut(s)	380, 495, 758, 1121, 1483, 1505, 1691, 1969
MfeI	CAATTG	1 cut(s)	335
MhlI	GDGCHC	7 cut(s)	156, 414, 946, 1086, 1307, 1692, 1857
MlyI	GAGTC	3 cut(s)	16, 1077, 1770
MmeI	TCCRAC	2 cut(s)	1462, 1835
Mph1103I	ATGCAT	1 cut(s)	765
MroI	TCCGGA	2 cut(s)	1339, 1865
MroXI	GAANNNNTTC	2 cut(s)	300, 960
MseI	TTAA	9 cut(s)	309, 363, 636, 840, 972, 986, 1545, 2139, 2173
MslI	CAYNNNNRTG	1 cut(s)	1784
MspA1I	CMGCKG	2 cut(s)	1057, 1403
MspI	CCGG	4 cut(s)	454, 1340, 1866, 2040
MspR9I	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2092
MunI	CAATTG	1 cut(s)	335
MvaI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 2092
MvnI	CGCG	4 cut(s)	12, 48, 1313, 2130
MwoI	GCNNNNNNNGC	5 cut(s)	11, 236, 1750, 1913, 2080
NciI	CCSGG	1 cut(s)	454
NcoI	CCATGG	3 cut(s)	1642, 1734, 1828
NlaIV	GGNNCC	4 cut(s)	537, 789, 1648, 1976
NmeAIII	GCCGAG	2 cut(s)	667, 1234
NmuCI	GTSAC	1 cut(s)	1069
NsiI	ATGCAT	1 cut(s)	765
NspI	RCATGY	3 cut(s)	581, 1050, 1319
OliI	CACNNNNGTG	1 cut(s)	1784
PaeI	GCATGC	2 cut(s)	581, 1319
PaeR7I	CTCGAG	3 cut(s)	155, 947, 2102
PaqCI	CACCTGC	1 cut(s)	1184
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PdmI	GAANNNNTTC	2 cut(s)	300, 960
PfeI	GAWTC	4 cut(s)	7, 1002, 1343, 1943
PfoI	TCCNGGA	1 cut(s)	1579
PkrI	GCNGC	3 cut(s)	628, 1059, 1906
PleI	GAGTC	3 cut(s)	16, 1076, 1770
PpsI	GAGTC	3 cut(s)	16, 1076, 1770
Ppu21I	YACGTR	1 cut(s)	748
PpuMI	RGGWCCY	1 cut(s)	203
PshBI	ATTAAT	1 cut(s)	1545
PsiI	TTATAA	1 cut(s)	1436
Psp124BI	GAGCTC	2 cut(s)	156, 414
Psp5II	RGGWCCY	1 cut(s)	203
Psp6I	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 2090
PspGI	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 2090
PspN4I	GGNNCC	4 cut(s)	537, 789, 1648, 1976
PspPI	GGNCC	5 cut(s)	203, 931, 1747, 1835, 1975
PspPPI	RGGWCCY	1 cut(s)	203
PsrI	GAACNNNNNNTAC	2 cut(s)	1459, 1491
PstI	CTGCAG	2 cut(s)	742, 1843
PvuII	CAGCTG	1 cut(s)	1403
RsaI	GTAC	4 cut(s)	405, 828, 1526, 2000
RsaNI	GTAC	4 cut(s)	404, 827, 1525, 1999
RseI	CAYNNNNRTG	1 cut(s)	1784
SacI	GAGCTC	2 cut(s)	156, 414
SaqAI	TTAA	9 cut(s)	309, 363, 636, 840, 972, 986, 1545, 2139, 2173
SatI	GCNGC	3 cut(s)	627, 1058, 1905
Sau96I	GGNCC	5 cut(s)	203, 931, 1747, 1835, 1975
SchI	GAGTC	3 cut(s)	16, 1077, 1770
ScrFI	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 2092
SduI	GDGCHC	7 cut(s)	156, 414, 946, 1086, 1307, 1692, 1857
SfaNI	GCATC	3 cut(s)	750, 772, 1021
SfcI	CTRYAG	3 cut(s)	738, 782, 1839
Sfr274I	CTCGAG	3 cut(s)	155, 947, 2102
SinI	GGWCC	4 cut(s)	203, 931, 1747, 1835
SlaI	CTCGAG	3 cut(s)	155, 947, 2102
SmiMI	CAYNNNNRTG	1 cut(s)	1784
SmlI	CTYRAG	7 cut(s)	111, 155, 221, 407, 947, 2084, 2102
SmoI	CTYRAG	7 cut(s)	111, 155, 221, 407, 947, 2084, 2102
SphI	GCATGC	2 cut(s)	581, 1319
SsiI	CCGC	7 cut(s)	66, 73, 134, 493, 1057, 1463, 2128
SspI	AATATT	1 cut(s)	1570
SspMI	CTAG	5 cut(s)	266, 773, 818, 1061, 1947
SstI	GAGCTC	2 cut(s)	156, 414
StyD4I	CCNGG	7 cut(s)	98, 283, 452, 1016, 1516, 1579, 2090
StyI	CCWWGG	6 cut(s)	278, 804, 1035, 1642, 1734, 1828
TaiI	ACGT	1 cut(s)	750
TaqI	TCGA	7 cut(s)	147, 156, 414, 948, 1711, 1878, 2103
TatI	WGTACW	1 cut(s)	403
TauI	GCSGC	1 cut(s)	1060
TfiI	GAWTC	4 cut(s)	7, 1002, 1343, 1943
Tru1I	TTAA	9 cut(s)	309, 363, 636, 840, 972, 986, 1545, 2139, 2173
Tru9I	TTAA	9 cut(s)	309, 363, 636, 840, 972, 986, 1545, 2139, 2173
TscAI	CASTG	7 cut(s)	175, 742, 910, 1078, 1255, 1307, 1429
TseFI	GTSAC	1 cut(s)	1069
TseI	GCWGC	2 cut(s)	626, 1904
Tsp45I	GTSAC	1 cut(s)	1069
TspDTI	ATGAA	6 cut(s)	969, 1433, 1526, 1629, 1779, 1862
TspGWI	ACGGA	2 cut(s)	506, 1945
TspRI	CASTG	7 cut(s)	175, 742, 910, 1078, 1255, 1307, 1429
VneI	GTGCAC	1 cut(s)	1303
VpaK11BI	GGWCC	4 cut(s)	203, 931, 1747, 1835
VspI	ATTAAT	1 cut(s)	1545
XapI	RAATTY	2 cut(s)	296, 1986
XceI	RCATGY	3 cut(s)	581, 1050, 1319
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1741
XhoI	CTCGAG	3 cut(s)	155, 947, 2102
XmiI	GTMKAC	1 cut(s)	28
XmnI	GAANNNNTTC	2 cut(s)	300, 960
XspI	CTAG	5 cut(s)	266, 773, 818, 1061, 1947
Zsp2I	ATGCAT	1 cut(s)	765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.