Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007584

Physical Location & Seq

Genomic Coordinates Reverse (-)

55127766 .. 55132996

Gene Structure 5231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G031060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGGCGAATCGCGCTAAGCTGACTCGAATACCGAGCATGAGAGATCGCGTGGAGGACACTCTCTCCGCTCACCGCAACGAAATCGTTGCGCTTCTCTCCAGGTATGTGGCTCAAGGAAAAGCGATACTGCAACCGCATGACCTGATCGATGAGCTCGAGAAAGTGATCACTGATGACAAAGCGAGGCTGAAGCTCAGCGAAGGTCCTTTTAGTGAAGTCCTCAAGTCGGCACAGGAAGCCATTGTTCATCCTCCATTTGTGGCTCTAGCAGTTCGTCCAAGGCCAGGTGTATGGGAATTCGTTCGTGTTAATGTGAATGAGCTGACTGTGGAACAATTGAGTGTTTCTGAATATCTTGGCTTTAAAGAAGAACTTGTGGATGGGAGGTCTAATGACAGATTTGTACTTGAGCTCGATTTTGAGCCATTCAACGCTAATTTTCCTCGTCCCACCCGGTCATCATCCATTGGGAATGGTGTTCAATTCCTCAACCGCCACCTTTCTTCAATTATGTTCCGTAACAAAGACTGTTTGGAGCCATTACTGGATTTCCTTAGAGCACACACATATAAAGGGCATGCGCTGATGTTGAATGATCGGATACAGAGCATATCCAAGCTTCAGGCAGCTTTGGTTAAGGCCGAGGATAATCTTTCTAAACTTCCATCTGAGACACCCTATTCTGAGTTTGAATATGTATTACAAGGATTGGGTTTTGACCAAGGTTGGGGAGACACTGCAGAACATGTATTGGAGATGATGCATCTTCTCCTAGATATCCTACAGGCTCCTGATCCTACTACCTTGGAGACATTTCTAGGGAGAGTACCAATGGTTTTTAATGTTGTCATTTTGTCTCCACATGGATACTTTGGGCAAGCAAATGTCTTAGGCTTACCCGACACTGGTGGGCAGGTTGTCTATATACTGGACCAAGTGCGTGCCCTCGAGAATGAAATGCTTCAAAGAATTAAGAGGCAAGGATTAAACTTTGCTCCAAGGATCCTTATTGTAACCAGGCTAATACCTGATGCCAAGGGAACTACATGCAACCAGCGGCTAGAAAGAGTCACTGGAACAGAGCACAGCCATATTTTGCGAGTTCCTTTCAGATCAGAGAATGGTATTCTTCGTAAATGGATATCAAGGTTTGATGTATGGCCTTATTTGGAGACCTTTGCTGAGGATGTTGGAGGTGAAATTACTGCTGAGTTACAGGGATATCCAGATTTTATTATTGGAAATTACAGTGATGGAAATCTTGTTGCCTCTTTGTTGGCTTATAAAATGGGGGTTACACAGTGCACCATCGCGCATGCGTTGGAGAAAACAAAATATCCGGATTCAGATATCTACTGGAAAAAATACGATGAGAAATATCACTTCTCATGTCAATTCACAGCTGACCTTATAGCCATGAACATTGCAGATTTTATAATCACCAGCACATACCAAGAGATTGCGGGAACGAAGAATACTGTTGGACAGTATGAGAGCCATAGCTCTTTCACTCTTCCAGGGCTGTACCGTGTTGTTCATGGCATTAATGTTTTTGATCCAAAGTTCAATATTGTGTCTCCTGGAGCTGATATGAGCATTTATTTCCCTTACTTTGAAAAGGAAAAGAGACTTACATCCCTCCATGGTTCCATTGAGAAGTTGCTTTATGATCCTGAGCAGAATGATGAGTACATTGGTCTTCTGAAGGATCGATCAAAGCCCATCTTATTTTCCATGGCAAGGCTGGACCAGGTGAAAAACATGACCGGTTTGGTTGAGTCCTATGGTAAGAATGCCAAACTAAGGGAACTAGTAAACCTTGTCTTGGTGGCTGGTCACAATGATGTGAAGAAGTCAAAAGATAGAGAAGAGATTGCTGAGATTGAAAAGATGCATGCTCTCATTAAGGAGTACAACTTGAATGGTCAATTTCGATGGATATCTTCCCAAACTAACCGAGCACGTAATGGGGAGCTATATCGTTACATTGCAGATACTGGAGGTGCTTTTGTTCAGCCTGCACTTTATGAAGCTTTTGGACTCACAGTTGTGGAGGCCATGACTTGTGGTCTTCCGACATTTGCCACAATCCATGGTGGTCCTGCGGAGATCATTGAGCACGGTATATCCGGATTTCATATCGACCCTTATCACTCTGAACAGATGGCTGCAATTATGGCTGATTTCTTTCAACGTAGTAAGGAGGATCCTAGCCACTGGAAGAAAATTGCAGATGGGGGCCTGAAAAGAATTTTTGAAAGGTACACGTGGAACATTTATTCTGAAAGGCTAATGACATTGGCCGGTGTTTACGGTTTCTGGAAGTATGTGTCAAAGCTTGATAGGCTTGAGACCAAGCGATATCTCGAGATGTTCTACATTCTGAAGTTCCGCGATTTGGTTAAAACTGTTCCTGAGGCAAGAGATGATCCACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0006073 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009311 GO:0009414 GO:0009415 GO:0009628 GO:0009743 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010154 GO:0010431 GO:0010555 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0035251 GO:0042221 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0046527 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071695 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

812

Amino Acids

92.57

Weight (kDa)

6.04

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	10 - 123	1.5e-49	Sucrose synthase N-terminal
SUS_EPBD	PF24862	158 - 245	8.1e-33	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	268 - 556	5.7e-169	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	568 - 743	1.8e-26	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	574 - 728	1.3e-12	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02280
fragaria_vesca	FvH4_2g26000 FvH4_2g26000
malus_domestica	MD11G1307000.v1.1
prunus_persica	Prupe.8G264300_v2.0.a1
pyrus_communis	pycom11g26860
rosa_chinensis	RchiOBHm_Chr3g0465391 RchiOBHm_Chr6g0294361
rosa_laevigata	RLG00000011877
rosa_multiflora	Rmu_co8254571.1_g000001 Rmu_sc0005369.1_g000012 Rmu_sc0016833.1_g000001
rosa_roxburghii	Rroxscaffold_7G00173440
rosa_rugosa	Rorug03G0273600 Rorug06G0243800
rosa_samantha	Rh2AG100600 Rh3BG141500 Rh3CG142600 Rh3DG142600 Rh6AG356400 Rh6BG363100 Rh6CG370400 Rh6DG356900
rosa_wichuraiana	Rw6G031060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1284, 1436
Acc36I	ACCTGC	1 cut(s)	904
AccBSI	CCGCTC	1 cut(s)	68
AccII	CGCG	4 cut(s)	12, 48, 1313, 2394
AccIII	TCCGGA	2 cut(s)	1339, 2129
AciI	CCGC	8 cut(s)	66, 73, 134, 493, 1057, 1463, 2105, 2392
AclWI	GGATC	9 cut(s)	788, 997, 1010, 1550, 1664, 1716, 2201, 2214, 2423
AcoI	YGGCCR	1 cut(s)	2301
AcsI	RAATTY	2 cut(s)	296, 2250
AcuI	CTGAAG	4 cut(s)	209, 605, 1724, 2405
AcvI	CACGTG	1 cut(s)	2268
AfaI	GTAC	6 cut(s)	405, 828, 1526, 1691, 1913, 2264
AfiI	CCNNNNNNNGG	8 cut(s)	226, 284, 727, 905, 1740, 1803, 1825, 2398
AflIII	ACRYGT	2 cut(s)	745, 2265
AgeI	ACCGGT	1 cut(s)	1766
AhdI	GACNNNNNGTC	1 cut(s)	2067
AhlI	ACTAGT	1 cut(s)	1810
AjnI	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 1749
AleI	CACNNNNGTG	1 cut(s)	2048
Alw21I	GWGCWC	7 cut(s)	156, 414, 562, 1086, 1307, 1963, 2121
Alw26I	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2345
Alw44I	GTGCAC	1 cut(s)	1303
AlwI	GGATC	9 cut(s)	788, 997, 1010, 1550, 1664, 1716, 2201, 2214, 2423
AlwNI	CAGNNNCTG	1 cut(s)	1997
Ama87I	CYCGRG	3 cut(s)	155, 947, 2366
Aor13HI	TCCGGA	2 cut(s)	1339, 2129
AoxI	GGCC	6 cut(s)	281, 639, 1160, 2055, 2239, 2301
ApaLI	GTGCAC	1 cut(s)	1303
ApeKI	GCWGC	2 cut(s)	626, 2168
ApoI	RAATTY	2 cut(s)	296, 2250
AseI	ATTAAT	1 cut(s)	1545
AsiGI	ACCGGT	1 cut(s)	1766
Asp700I	GAANNNNTTC	2 cut(s)	300, 960
AspLEI	GCGC	4 cut(s)	14, 91, 583, 1315
AspS9I	GGNCC	5 cut(s)	203, 931, 1747, 2099, 2239
AsuC2I	CCSGG	1 cut(s)	454
AsuHPI	GGTGA	4 cut(s)	62, 1208, 1432, 1765
AvaI	CYCGRG	3 cut(s)	155, 947, 2366
AvaII	GGWCC	4 cut(s)	203, 931, 1747, 2099
AxyI	CCTNAGG	1 cut(s)	2415
BaeGI	GKGCMC	2 cut(s)	946, 1307
BamHI	GGATCC	2 cut(s)	1002, 2206
BanII	GRGCYC	2 cut(s)	156, 414
BbrPI	CACGTG	1 cut(s)	2268
BbsI	GAAGAC	2 cut(s)	1691, 2063
Bbv12I	GWGCWC	7 cut(s)	156, 414, 562, 1086, 1307, 1963, 2121
BbvCI	CCTCAGC	1 cut(s)	1182
BbvI	GCAGC	2 cut(s)	638, 2155
BccI	CCATC	8 cut(s)	374, 673, 1247, 1316, 1730, 1929, 2158, 2228
BcgI	CGANNNNNNTGC	4 cut(s)	64, 68, 98, 102
BciT130I	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 1751
BciVI	GTATCC	2 cut(s)	594, 860
BclI	TGATCA	1 cut(s)	165
BcnI	CCSGG	1 cut(s)	454
BcoDI	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2345
BcuI	ACTAGT	1 cut(s)	1810
BfaI	CTAG	6 cut(s)	266, 773, 818, 1061, 1811, 2211
BfmI	CTRYAG	2 cut(s)	738, 782
BfuAI	ACCTGC	1 cut(s)	904
BfuI	GTATCC	2 cut(s)	594, 860
BisI	GCNGC	3 cut(s)	627, 1058, 2169
BlpI	GCTNAGC	2 cut(s)	15, 194
BlsI	GCNGC	3 cut(s)	628, 1059, 2170
Bme1390I	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 1751
Bme18I	GGWCC	4 cut(s)	203, 931, 1747, 2099
BmeRI	GACNNNNNGTC	1 cut(s)	2067
BmeT110I	CYCGRG	3 cut(s)	155, 947, 2366
BmgT120I	GGNCC	5 cut(s)	203, 931, 1747, 2099, 2239
BmiI	GGNNCC	6 cut(s)	537, 789, 1004, 1648, 2208, 2240
BmrFI	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 1751
BmsI	GCATC	4 cut(s)	750, 772, 1021, 1881
BpiI	GAAGAC	2 cut(s)	1691, 2063
BpmI	CTGGAG	3 cut(s)	82, 1602, 2019
Bpu10I	CCTNAGC	2 cut(s)	1182, 1674
Bpu1102I	GCTNAGC	2 cut(s)	15, 194
BpuEI	CTTGAG	4 cut(s)	96, 206, 428, 2369
BpuMI	CCSGG	1 cut(s)	454
Bsa29I	ATCGAT	2 cut(s)	147, 1711
BsaAI	YACGTR	2 cut(s)	1964, 2268
BsaBI	GATNNNNATC	2 cut(s)	1257, 1939
BsaI	GGTCTC	2 cut(s)	1166, 2345
BsaWI	WCCGGW	3 cut(s)	1339, 1766, 2129
BsaXI	ACNNNNNCTCC	2 cut(s)	47, 77
Bsc4I	CCNNNNNNNGG	8 cut(s)	226, 284, 727, 905, 1740, 1803, 1825, 2398
Bse118I	RCCGGY	2 cut(s)	1766, 2303
Bse1I	ACTGG	7 cut(s)	549, 910, 933, 1078, 1361, 2002, 2222
Bse21I	CCTNAGG	1 cut(s)	2415
Bse3DI	GCAATG	2 cut(s)	1422, 1986
Bse8I	GATNNNNATC	2 cut(s)	1257, 1939
BseAI	TCCGGA	2 cut(s)	1339, 2129
BseBI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 1751
BseCI	ATCGAT	2 cut(s)	147, 1711
BseGI	GGATG	5 cut(s)	247, 385, 461, 1192, 1634
BseJI	GATNNNNATC	2 cut(s)	1257, 1939
BseLI	CCNNNNNNNGG	8 cut(s)	226, 284, 727, 905, 1740, 1803, 1825, 2398
BseMI	GCAATG	2 cut(s)	1422, 1986
BseMII	CTCAG	8 cut(s)	208, 660, 675, 1173, 1200, 1665, 1869, 2406
BseNI	ACTGG	7 cut(s)	549, 910, 933, 1078, 1361, 2002, 2222
BseSI	GKGCMC	2 cut(s)	946, 1307
BseXI	GCAGC	2 cut(s)	638, 2155
BsgI	GTGCAG	1 cut(s)	2004
Bsh1236I	CGCG	4 cut(s)	12, 48, 1313, 2394
BshFI	GGCC	6 cut(s)	283, 641, 1162, 2057, 2241, 2303
BshTI	ACCGGT	1 cut(s)	1766
BshVI	ATCGAT	2 cut(s)	147, 1711
BsiHKAI	GWGCWC	7 cut(s)	156, 414, 562, 1086, 1307, 1963, 2121
BsiHKCI	CYCGRG	3 cut(s)	155, 947, 2366
BsiSI	CCGG	5 cut(s)	454, 1340, 1767, 2130, 2304
BslFI	GGGAC	1 cut(s)	432
BslI	CCNNNNNNNGG	8 cut(s)	226, 284, 727, 905, 1740, 1803, 1825, 2398
BsmAI	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2345
BsmFI	GGGAC	1 cut(s)	432
BsmI	GAATGC	1 cut(s)	1798
BsnI	GGCC	6 cut(s)	283, 641, 1162, 2057, 2241, 2303
Bso31I	GGTCTC	2 cut(s)	1166, 2345
BsoBI	CYCGRG	3 cut(s)	155, 947, 2366
Bsp1286I	GDGCHC	8 cut(s)	156, 414, 562, 946, 1086, 1307, 1963, 2121
Bsp13I	TCCGGA	2 cut(s)	1339, 2129
Bsp1720I	GCTNAGC	2 cut(s)	15, 194
Bsp19I	CCATGG	3 cut(s)	1642, 1734, 2092
BspACI	CCGC	8 cut(s)	66, 73, 134, 493, 1057, 1463, 2105, 2392
BspANI	GGCC	6 cut(s)	283, 641, 1162, 2057, 2241, 2303
BspCNI	CTCAG	8 cut(s)	207, 661, 676, 1174, 1201, 1666, 1870, 2407
BspDI	ATCGAT	2 cut(s)	147, 1711
BspEI	TCCGGA	2 cut(s)	1339, 2129
BspFNI	CGCG	4 cut(s)	12, 48, 1313, 2394
BspLI	GGNNCC	6 cut(s)	537, 789, 1004, 1648, 2208, 2240
BspMAI	CTGCAG	1 cut(s)	742
BspMI	ACCTGC	1 cut(s)	904
BspPI	GGATC	9 cut(s)	788, 997, 1010, 1550, 1664, 1716, 2201, 2214, 2423
BspTNI	GGTCTC	2 cut(s)	1166, 2345
BsrBI	CCGCTC	1 cut(s)	68
BsrDI	GCAATG	2 cut(s)	1422, 1986
BsrFI	RCCGGY	2 cut(s)	1766, 2303
BsrI	ACTGG	7 cut(s)	549, 910, 933, 1078, 1361, 2002, 2222
BssAI	RCCGGY	2 cut(s)	1766, 2303
BssT1I	CCWWGG	8 cut(s)	278, 721, 804, 998, 1035, 1642, 1734, 2092
Bst2UI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 1751
Bst6I	CTCTTC	2 cut(s)	1518, 1863
BstBAI	YACGTR	2 cut(s)	1964, 2268
BstC8I	GCNNGC	6 cut(s)	579, 879, 942, 1317, 1896, 2019
BstDSI	CCRYGG	3 cut(s)	1642, 1734, 2092
BstF5I	GGATG	5 cut(s)	247, 385, 461, 1192, 1634
BstFNI	CGCG	4 cut(s)	12, 48, 1313, 2394
BstHHI	GCGC	4 cut(s)	14, 91, 583, 1315
BstMAI	GTCTC	8 cut(s)	665, 726, 803, 861, 1166, 1581, 1621, 2345
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 236, 2177, 2344
BstNI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 1751
BstNSI	RCATGY	5 cut(s)	581, 749, 1050, 1319, 1898
BstSCI	CCNGG	7 cut(s)	98, 283, 452, 1016, 1516, 1579, 1749
BstSFI	CTRYAG	2 cut(s)	738, 782
BstSLI	GKGCMC	2 cut(s)	946, 1307
BstUI	CGCG	4 cut(s)	12, 48, 1313, 2394
BstV1I	GCAGC	2 cut(s)	638, 2155
BstV2I	GAAGAC	2 cut(s)	1691, 2063
BstX2I	RGATCY	2 cut(s)	1002, 2206
BstXI	CCANNNNNNTGG	2 cut(s)	106, 291
BstYI	RGATCY	2 cut(s)	1002, 2206
Bsu15I	ATCGAT	2 cut(s)	147, 1711
Bsu36I	CCTNAGG	1 cut(s)	2415
BsuI	GTATCC	2 cut(s)	594, 860
BsuRI	GGCC	6 cut(s)	283, 641, 1162, 2057, 2241, 2303
BsuTUI	ATCGAT	2 cut(s)	147, 1711
BtgI	CCRYGG	3 cut(s)	1642, 1734, 2092
BtgZI	GCGATG	1 cut(s)	1294
BtsCI	GGATG	5 cut(s)	247, 385, 461, 1192, 1634
BtsI	GCAGTG	1 cut(s)	735
BtsIMutI	CAGTG	7 cut(s)	168, 735, 903, 1071, 1255, 1307, 2215
BveI	ACCTGC	1 cut(s)	904
Cac8I	GCNNGC	6 cut(s)	579, 879, 942, 1317, 1896, 2019
CaiI	CAGNNNCTG	1 cut(s)	1997
CfoI	GCGC	4 cut(s)	14, 91, 583, 1315
Cfr10I	RCCGGY	2 cut(s)	1766, 2303
Cfr13I	GGNCC	5 cut(s)	203, 931, 1747, 2099, 2239
ClaI	ATCGAT	2 cut(s)	147, 1711
CsiI	ACCWGGT	1 cut(s)	1749
Csp6I	GTAC	6 cut(s)	404, 827, 1525, 1690, 1912, 2263
CspAI	ACCGGT	1 cut(s)	1766
CviQI	GTAC	6 cut(s)	404, 827, 1525, 1690, 1912, 2263
DraI	TTTAAA	1 cut(s)	364
DriI	GACNNNNNGTC	1 cut(s)	2067
EaeI	YGGCCR	1 cut(s)	2301
Eam1104I	CTCTTC	2 cut(s)	1518, 1863
Eam1105I	GACNNNNNGTC	1 cut(s)	2067
EarI	CTCTTC	2 cut(s)	1518, 1863
Ecl136II	GAGCTC	2 cut(s)	154, 412
Eco130I	CCWWGG	8 cut(s)	278, 721, 804, 998, 1035, 1642, 1734, 2092
Eco24I	GRGCYC	2 cut(s)	156, 414
Eco31I	GGTCTC	2 cut(s)	1166, 2345
Eco32I	GATATC	6 cut(s)	778, 1143, 1223, 1351, 1941, 2363
Eco47I	GGWCC	4 cut(s)	203, 931, 1747, 2099
Eco53kI	GAGCTC	2 cut(s)	154, 412
Eco57I	CTGAAG	4 cut(s)	209, 605, 1724, 2405
Eco72I	CACGTG	1 cut(s)	2268
Eco81I	CCTNAGG	1 cut(s)	2415
Eco88I	CYCGRG	3 cut(s)	155, 947, 2366
EcoICRI	GAGCTC	2 cut(s)	154, 412
EcoO109I	RGGNCCY	2 cut(s)	203, 2239
EcoRI	GAATTC	1 cut(s)	296
EcoRII	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 1749
EcoRV	GATATC	6 cut(s)	778, 1143, 1223, 1351, 1941, 2363
EcoT14I	CCWWGG	8 cut(s)	278, 721, 804, 998, 1035, 1642, 1734, 2092
EcoT22I	ATGCAT	2 cut(s)	765, 1896
EcoT38I	GRGCYC	2 cut(s)	156, 414
ErhI	CCWWGG	8 cut(s)	278, 721, 804, 998, 1035, 1642, 1734, 2092
FalI	AAGNNNNNCTT	4 cut(s)	357, 389, 1709, 1741
FaqI	GGGAC	1 cut(s)	432
FauI	CCCGC	1 cut(s)	1456
FbaI	TGATCA	1 cut(s)	165
Fnu4HI	GCNGC	3 cut(s)	627, 1058, 2169
FokI	GGATG	5 cut(s)	234, 392, 448, 1199, 1621
FriOI	GRGCYC	2 cut(s)	156, 414
Fsp4HI	GCNGC	3 cut(s)	627, 1058, 2169
FspBI	CTAG	6 cut(s)	266, 773, 818, 1061, 1811, 2211
GlaI	GCGC	4 cut(s)	13, 90, 582, 1314
GluI	GCNGC	3 cut(s)	627, 1058, 2169
GsuI	CTGGAG	3 cut(s)	82, 1602, 2019
HaeIII	GGCC	6 cut(s)	283, 641, 1162, 2057, 2241, 2303
HapII	CCGG	5 cut(s)	454, 1340, 1767, 2130, 2304
HhaI	GCGC	4 cut(s)	14, 91, 583, 1315
Hin6I	GCGC	4 cut(s)	12, 89, 581, 1313
HinP1I	GCGC	4 cut(s)	12, 89, 581, 1313
HindIII	AAGCTT	3 cut(s)	617, 2031, 2336
HinfI	GANTC	6 cut(s)	7, 22, 1068, 1343, 1778, 2040
HpaII	CCGG	5 cut(s)	454, 1340, 1767, 2130, 2304
HphI	GGTGA	4 cut(s)	62, 1208, 1432, 1765
Hpy166II	GTNNAC	4 cut(s)	1305, 1816, 2265, 2311
Hpy8I	GTNNAC	4 cut(s)	1305, 1816, 2265, 2311
HpyAV	CCTTC	2 cut(s)	194, 1699
HpyCH4IV	ACGT	3 cut(s)	1963, 2194, 2267
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 236, 2177, 2344
HpySE526I	ACGT	3 cut(s)	1963, 2194, 2267
HspAI	GCGC	4 cut(s)	12, 89, 581, 1313
Kpn2I	TCCGGA	2 cut(s)	1339, 2129
Ksp22I	TGATCA	1 cut(s)	165
LmnI	GCTCC	5 cut(s)	535, 793, 1000, 1583, 1972
Lsp1109I	GCAGC	2 cut(s)	638, 2155
LweI	GCATC	4 cut(s)	750, 772, 1021, 1881
MabI	ACCWGGT	1 cut(s)	1749
MaeI	CTAG	6 cut(s)	266, 773, 818, 1061, 1811, 2211
MaeII	ACGT	3 cut(s)	1963, 2194, 2267
MaeIII	GTNAC	7 cut(s)	518, 1012, 1069, 1212, 1294, 1835, 1982
MbiI	CCGCTC	1 cut(s)	68
MfeI	CAATTG	1 cut(s)	335
MflI	RGATCY	2 cut(s)	1002, 2206
MhlI	GDGCHC	8 cut(s)	156, 414, 562, 946, 1086, 1307, 1963, 2121
MlyI	GAGTC	4 cut(s)	16, 1077, 1787, 2034
MmeI	TCCRAC	4 cut(s)	1171, 1302, 1462, 2099
Mph1103I	ATGCAT	2 cut(s)	765, 1896
MroI	TCCGGA	2 cut(s)	1339, 2129
MroXI	GAANNNNTTC	2 cut(s)	300, 960
MslI	CAYNNNNRTG	2 cut(s)	1842, 2048
MspA1I	CMGCKG	2 cut(s)	1057, 1403
MspI	CCGG	5 cut(s)	454, 1340, 1767, 2130, 2304
MspR9I	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 1751
MunI	CAATTG	1 cut(s)	335
Mva1269I	GAATGC	1 cut(s)	1798
MvaI	CCWGG	6 cut(s)	100, 285, 1018, 1518, 1581, 1751
MvnI	CGCG	4 cut(s)	12, 48, 1313, 2394
MwoI	GCNNNNNNNGC	4 cut(s)	11, 236, 2177, 2344
NciI	CCSGG	1 cut(s)	454
NcoI	CCATGG	3 cut(s)	1642, 1734, 2092
NlaIV	GGNNCC	6 cut(s)	537, 789, 1004, 1648, 2208, 2240
NmeAIII	GCCGAG	1 cut(s)	667
NmuCI	GTSAC	2 cut(s)	1069, 1835
NsiI	ATGCAT	2 cut(s)	765, 1896
NspI	RCATGY	5 cut(s)	581, 749, 1050, 1319, 1898
OliI	CACNNNNGTG	1 cut(s)	2048
PaeI	GCATGC	3 cut(s)	581, 1319, 1898
PaeR7I	CTCGAG	3 cut(s)	155, 947, 2366
PciI	ACATGT	1 cut(s)	745
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PctI	GAATGC	1 cut(s)	1798
PdmI	GAANNNNTTC	2 cut(s)	300, 960
PfeI	GAWTC	2 cut(s)	7, 1343
PfoI	TCCNGGA	1 cut(s)	1579
PinAI	ACCGGT	1 cut(s)	1766
PkrI	GCNGC	3 cut(s)	628, 1059, 2170
PleI	GAGTC	4 cut(s)	16, 1076, 1786, 2034
PmaCI	CACGTG	1 cut(s)	2268
PmlI	CACGTG	1 cut(s)	2268
PpsI	GAGTC	4 cut(s)	16, 1076, 1786, 2034
Ppu21I	YACGTR	2 cut(s)	1964, 2268
PpuMI	RGGWCCY	1 cut(s)	203
PscI	ACATGT	1 cut(s)	745
PshBI	ATTAAT	1 cut(s)	1545
PsiI	TTATAA	2 cut(s)	1284, 1436
Psp124BI	GAGCTC	2 cut(s)	156, 414
Psp5II	RGGWCCY	1 cut(s)	203
Psp6I	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 1749
PspCI	CACGTG	1 cut(s)	2268
PspGI	CCWGG	6 cut(s)	98, 283, 1016, 1516, 1579, 1749
PspN4I	GGNNCC	6 cut(s)	537, 789, 1004, 1648, 2208, 2240
PspPI	GGNCC	5 cut(s)	203, 931, 1747, 2099, 2239
PspPPI	RGGWCCY	1 cut(s)	203
PsrI	GAACNNNNNNTAC	2 cut(s)	1459, 1491
PstI	CTGCAG	1 cut(s)	742
PstNI	CAGNNNCTG	1 cut(s)	1997
PsuI	RGATCY	2 cut(s)	1002, 2206
PvuII	CAGCTG	1 cut(s)	1403
RsaI	GTAC	6 cut(s)	405, 828, 1526, 1691, 1913, 2264
RsaNI	GTAC	6 cut(s)	404, 827, 1525, 1690, 1912, 2263
RseI	CAYNNNNRTG	2 cut(s)	1842, 2048
SacI	GAGCTC	2 cut(s)	156, 414
SatI	GCNGC	3 cut(s)	627, 1058, 2169
Sau96I	GGNCC	5 cut(s)	203, 931, 1747, 2099, 2239
SchI	GAGTC	4 cut(s)	16, 1077, 1787, 2034
ScrFI	CCNGG	7 cut(s)	100, 285, 454, 1018, 1518, 1581, 1751
SduI	GDGCHC	8 cut(s)	156, 414, 562, 946, 1086, 1307, 1963, 2121
SexAI	ACCWGGT	1 cut(s)	1749
SfaNI	GCATC	4 cut(s)	750, 772, 1021, 1881
SfcI	CTRYAG	2 cut(s)	738, 782
Sfr274I	CTCGAG	3 cut(s)	155, 947, 2366
SinI	GGWCC	4 cut(s)	203, 931, 1747, 2099
SlaI	CTCGAG	3 cut(s)	155, 947, 2366
SmiMI	CAYNNNNRTG	2 cut(s)	1842, 2048
SmlI	CTYRAG	7 cut(s)	111, 155, 221, 407, 947, 2348, 2366
SmoI	CTYRAG	7 cut(s)	111, 155, 221, 407, 947, 2348, 2366
SpeI	ACTAGT	1 cut(s)	1810
SphI	GCATGC	3 cut(s)	581, 1319, 1898
SsiI	CCGC	8 cut(s)	66, 73, 134, 493, 1057, 1463, 2105, 2392
SspI	AATATT	1 cut(s)	1570
SspMI	CTAG	6 cut(s)	266, 773, 818, 1061, 1811, 2211
SstI	GAGCTC	2 cut(s)	156, 414
StyD4I	CCNGG	7 cut(s)	98, 283, 452, 1016, 1516, 1579, 1749
StyI	CCWWGG	8 cut(s)	278, 721, 804, 998, 1035, 1642, 1734, 2092
TaiI	ACGT	3 cut(s)	1966, 2197, 2270
TaqI	TCGA	9 cut(s)	25, 147, 156, 414, 948, 1711, 1933, 2142, 2367
TatI	WGTACW	3 cut(s)	403, 1689, 1911
TauI	GCSGC	1 cut(s)	1060
TfiI	GAWTC	2 cut(s)	7, 1343
TscAI	CASTG	7 cut(s)	175, 742, 910, 1078, 1255, 1307, 2222
TseFI	GTSAC	2 cut(s)	1069, 1835
TseI	GCWGC	2 cut(s)	626, 2168
Tsp45I	GTSAC	2 cut(s)	1069, 1835
TspDTI	ATGAA	6 cut(s)	236, 969, 1433, 1526, 2043, 2126
TspGWI	ACGGA	1 cut(s)	506
TspRI	CASTG	7 cut(s)	175, 742, 910, 1078, 1255, 1307, 2222
VneI	GTGCAC	1 cut(s)	1303
VpaK11BI	GGWCC	4 cut(s)	203, 931, 1747, 2099
VspI	ATTAAT	1 cut(s)	1545
XapI	RAATTY	2 cut(s)	296, 2250
XceI	RCATGY	5 cut(s)	581, 749, 1050, 1319, 1898
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1741
XhoI	CTCGAG	3 cut(s)	155, 947, 2366
XmnI	GAANNNNTTC	2 cut(s)	300, 960
XspI	CTAG	6 cut(s)	266, 773, 818, 1061, 1811, 2211
Zsp2I	ATGCAT	2 cut(s)	765, 1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.