Rorug06G0243800

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
38825968 .. 38826577
610 bp
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UTR
Exon/CDS
Intron
Rorug06G0243800.1

Sequence Viewer

Length: 264 bp
ATGCTGAAGATAGGATTGTTTATAGGTGTTTCATTGGCTGTAATTCTGGGAACATCTTTTGGTTCTATAGCGACCTTGTTCACCAAGGATGCTGCAGTATTGGAGATCCTTAGATCTGGGGTATTGAAACTGCAGTTAGTCTTTTATAACAATGCTGATGTTGTCAAATTTGCCACAATGGTCGTGGGTGCAATATCATCCGTCTTTCTGCTATATGCTCCTTCTGTTATCAGTCTTTCTGGGGTTTGGTTGGGTTTGACCTAA

Protein Analysis

87

Amino Acids

9.15

Weight (kDa)

9.3

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 147
AclWI GGATC 1 cut(s) 100
AcsI RAATTY 1 cut(s) 167
AcuI CTGAAG 1 cut(s) 26
AgsI TTSAA 1 cut(s) 127
AlwI GGATC 1 cut(s) 100
ApeKI GCWGC 1 cut(s) 92
ApoI RAATTY 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 73
BbvI GCAGC 1 cut(s) 79
BfmI CTRYAG 3 cut(s) 66, 93, 131
BglII AGATCT 1 cut(s) 113
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
BmsI GCATC 1 cut(s) 79
BsaJI CCNNGG 1 cut(s) 84
BseDI CCNNGG 1 cut(s) 84
BseGI GGATG 2 cut(s) 94, 197
BseXI GCAGC 1 cut(s) 79
Bsp143I GATC 2 cut(s) 105, 113
BspMAI CTGCAG 2 cut(s) 97, 135
BspPI GGATC 1 cut(s) 100
BssECI CCNNGG 1 cut(s) 84
BssMI GATC 2 cut(s) 105, 113
BssT1I CCWWGG 1 cut(s) 84
BstDEI CTNAG 1 cut(s) 110
BstF5I GGATG 2 cut(s) 94, 197
BstKTI GATC 2 cut(s) 108, 116
BstMBI GATC 2 cut(s) 105, 113
BstSFI CTRYAG 3 cut(s) 66, 93, 131
BstV1I GCAGC 1 cut(s) 79
BstX2I RGATCY 2 cut(s) 105, 113
BstYI RGATCY 2 cut(s) 105, 113
BtsCI GGATG 2 cut(s) 94, 197
CspCI CAANNNNNGTGG 2 cut(s) 165, 200
CviJI RGCY 1 cut(s) 38
CviKI_1 RGCY 1 cut(s) 38
DdeI CTNAG 1 cut(s) 110
DpnI GATC 2 cut(s) 107, 115
DpnII GATC 2 cut(s) 105, 113
Eco130I CCWWGG 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 26
EcoT14I CCWWGG 1 cut(s) 84
ErhI CCWWGG 1 cut(s) 84
FaiI YATR 5 cut(s) 23, 68, 147, 214, 216
Fnu4HI GCNGC 1 cut(s) 93
FokI GGATG 2 cut(s) 101, 184
Fsp4HI GCNGC 1 cut(s) 93
GluI GCNGC 1 cut(s) 93
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 81
Hpy8I GTNNAC 1 cut(s) 81
HpyAV CCTTC 1 cut(s) 231
HpyCH4V TGCA 3 cut(s) 95, 133, 191
HpyF3I CTNAG 1 cut(s) 110
Kzo9I GATC 2 cut(s) 105, 113
LmnI GCTCC 1 cut(s) 223
LpnPI CCDG 3 cut(s) 32, 102, 225
Lsp1109I GCAGC 1 cut(s) 79
LweI GCATC 1 cut(s) 79
MalI GATC 2 cut(s) 107, 115
MboI GATC 2 cut(s) 105, 113
MboII GAAGA 1 cut(s) 19
MflI RGATCY 2 cut(s) 105, 113
MluCI AATT 2 cut(s) 42, 167
NdeII GATC 2 cut(s) 105, 113
PkrI GCNGC 1 cut(s) 94
PsiI TTATAA 1 cut(s) 147
PstI CTGCAG 2 cut(s) 97, 135
PsuI RGATCY 2 cut(s) 105, 113
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 2 cut(s) 105, 113
SetI ASST 3 cut(s) 28, 77, 263
SfaNI GCATC 1 cut(s) 79
SfcI CTRYAG 3 cut(s) 66, 93, 131
SgeI CNNG 6 cut(s) 59, 88, 97, 129, 196, 252
Sse9I AATT 2 cut(s) 42, 167
StyI CCWWGG 1 cut(s) 84
TasI AATT 2 cut(s) 42, 167
TseI GCWGC 1 cut(s) 92
TspDTI ATGAA 1 cut(s) 21
TspGWI ACGGA 1 cut(s) 190
XapI RAATTY 1 cut(s) 167
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.