FvH4_2g28600

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0008683
Physical Location & Seq
Forward (+)
22368142 .. 22371995
3854 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g28600.t2

Sequence Viewer

Length: 1989 bp
ATGTTGAAGTACGAGAAGGCGCTGAAACTGCTGCCGAGGAACCATATTGATGTTGCTCATTTGCATAGTAACATGGCTGCTTGTTATATGCAGTTGGGACTCGGTGAGTATCCTCGAGCGATTAATGAATGCAATTTGGCACTGGAGGTGTCACCAAGGTACAGTAAGGCGTTGCTGAGGAGGTCGAGGTGTTATGAGGCTTTGAATAGGTTGGATTTGGCATTGAGGGATGTTAATACTGTTTTGAGTATGGAGCCGAATAATCTAAATGCGTTGGAGATTTTGGAGAGTGTGAAGAAGGTGATAAGCGAAAAGGGGATTGTTGTTGATGAGAAAGAAATTGGTATTGTGGATGTACAGCAGATACCTGCTGCTCGGTTTCATAAAGTGGTGAAAGAGAAGACAAAGAAGAAGAAGGGTAAGATGGTTGAGGAGAAGACAGAGGACAAGGCTGTTGTGGAAGAAAATGTGAGAGTTATCAGGGACAAAGAAGTGGTTACAAAGACTGTTGAGGAAGAGAAACCGGTCTTAAAGCATATTGAGGAAGAGAAACAAGTCGTGAATCGTGTGGAAGAGAAGCATATTAAGGAAGAAACCGTAGTTAGAAAGACAGTCAAGTTGGTGTTTGGAGAGGATATAAGATGGGCACAGCTACCAGTCAATTGTAGCATGTGGCTGGTCAGGGAGATAGTTAAGGATCGATTTCCTGGCTTGAAGGGTGTTCTGGTGAAGTACAAAGATCAAGAGGGTGATTTGGTTACAATCACAACTACGGATGAGTTGAGGTTAGCTGAATCATCATGTGATACAAGGGGGTCACTTAGATTTTTCATAACAGAAGTCGGTGCTGATCAGGAACCAATTTATGAGGGATCAAGTGAAGAGGAAGCGCGTAAGGAAGATCTGAAGCCAAGTAATGTTGTTGAGAATGGGGACAGCGGAAATCATACAGAAGTAGGAAAAGGGTCTACAACTTGTGTTGAGGACTGGATTATCCAGTTTGCAAGATTGTTCAAGAACCATGTTGGGTTCGATTCTGATTCGTACTTGGATCTTCACGAACTCGGGGTGAAGCTATACTCGGAGGCAATGGAAGACACTGTAACACTTGATGATGCTCAAGAACTTTTTGATATTGCTGCAATTAAGTTCCAAGAGATGGCGGCTTTGGCATTGTTTAATTGGGGAAATGTTCACATGTCTAAGGCAAGGAAGCGGGCATCCTTGCCCGAAGATGCTTCAAGGGAAACCATTACTGAACAGATCAAGGCTGCATATGAATGGGCACAGAAAGAGTACAAGAAGGCAGAGAGTAGGTATGAAGAAGCTGTGAAAGTAAAACCAGACTTCTATGAAGGTTATCTTGCACTTGGCCAACAACAGTTTGAACAAGCAAAGCTTTCTTGGTACTATGCAATTGGAAGCAAGATTGAGTTGCAAACTGAGCCTTCTTCAGAGGTGCTTCAGCTTTATAATAAGGCTGAGGACAGCATGGACAAGGGAATGCTATTATGGGAGGAGATAGAAGAGAGGCGTCTAAATGGACTCTCCAAAGAAGATAAATATAAAGCGCAATTGCAGAAAATGGGATTGGATGGTCTATTTGAGGAGATGTCTGCTGATGAAGCTGCAGAACAGGCTGCAAATATGAAGTCACAAATATACCTCCTGTGGGGAACCTTGCTGTATGAGCGTTCTGTTGTGGAATATAAGCTAGAGCTGCCAACTTGGGAGGAATGTCTAGAAGTTGCCATTGAGAAGTTTGAACTTTGTGGAGCCTCTCCAACAGATATAGCTGTGATGATAAAGAATCACTGTTCCAATGAAAATGCAGTGGAAGGTATGGGATTCAAAATTGATGAGATAATCCAGGCATGGAATGAAATGTATGATGCTAAGAGGTGGCAGTTTGGTGTCCCCTCTTTCCGGCTTGAACCATTGTTACGTCGGCACGTCCCAAAACTTCATTCTATCTTGGAGCATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0008150 GO:0032886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0065007
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

663

Amino Acids

75.98

Weight (kDa)

5.2

Isoelectric Point (pI)

49.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 265 - 340 1.3e-12 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1473
Acc36I ACCTGC 1 cut(s) 376
AccB7I CCANNNNNTGG 1 cut(s) 1159
AccI GTMKAC 1 cut(s) 968
AccII CGCG 1 cut(s) 892
AciI CCGC 3 cut(s) 939, 1163, 1216
AclWI GGATC 3 cut(s) 705, 880, 1059
AcoI YGGCCR 1 cut(s) 1372
AcuI CTGAAG 3 cut(s) 926, 1437, 1448
AcyI GRCGYC 1 cut(s) 1534
AfaI GTAC 7 cut(s) 11, 161, 357, 734, 1046, 1298, 1409
AfiI CCNNNNNNNGG 3 cut(s) 1159, 1672, 1926
AflIII ACRYGT 1 cut(s) 1197
AgeI ACCGGT 1 cut(s) 523
AgsI TTSAA 9 cut(s) 7, 205, 715, 1015, 1242, 1388, 1766, 1852, 1934
AjiI CACGTC 1 cut(s) 1954
AjnI CCWGG 2 cut(s) 706, 1869
AjuI GAANNNNNNNTTGG 4 cut(s) 1574, 1606, 1951, 1983
AlwI GGATC 3 cut(s) 705, 880, 1059
Ama87I CYCGRG 2 cut(s) 114, 1064
AoxI GGCC 1 cut(s) 1372
ApeKI GCWGC 8 cut(s) 31, 77, 371, 1139, 1271, 1628, 1640, 1720
ArsI GACNNNNNNTTYG 2 cut(s) 1637, 1669
AseI ATTAAT 1 cut(s) 123
AsiGI ACCGGT 1 cut(s) 523
AspLEI GCGC 3 cut(s) 22, 892, 1573
AsuHPI GGTGA 7 cut(s) 116, 144, 313, 403, 739, 761, 1081
AvaI CYCGRG 2 cut(s) 114, 1064
BaeGI GKGCMC 2 cut(s) 649, 1288
BalI TGGCCA 1 cut(s) 1374
BbsI GAAGAC 3 cut(s) 407, 443, 1101
BbvCI CCTCAGC 2 cut(s) 176, 1482
BbvI GCAGC 8 cut(s) 18, 64, 358, 1126, 1258, 1615, 1627, 1707
BccI CCATC 4 cut(s) 418, 636, 1153, 1589
BciT130I CCWGG 2 cut(s) 708, 1871
BciVI GTATCC 1 cut(s) 120
BclI TGATCA 1 cut(s) 850
BfaI CTAG 2 cut(s) 1715, 1742
BfmI CTRYAG 1 cut(s) 1629
BfoI RGCGCY 1 cut(s) 23
BfuAI ACCTGC 1 cut(s) 376
BfuI GTATCC 1 cut(s) 120
BglII AGATCT 1 cut(s) 901
BisI GCNGC 9 cut(s) 32, 78, 372, 1140, 1164, 1272, 1629, 1641, 1721
BlsI GCNGC 9 cut(s) 33, 79, 373, 1141, 1165, 1273, 1630, 1642, 1722
Bme1390I CCNGG 2 cut(s) 708, 1871
BmeT110I CYCGRG 2 cut(s) 114, 1064
BmgBI CACGTC 1 cut(s) 1954
BmiI GGNNCC 5 cut(s) 41, 255, 858, 1678, 1777
BmrFI CCNGG 2 cut(s) 708, 1871
BmsI GCATC 4 cut(s) 1105, 1225, 1229, 1882
BpiI GAAGAC 3 cut(s) 407, 443, 1101
BpmI CTGGAG 1 cut(s) 164
Bpu10I CCTNAGC 2 cut(s) 176, 1482
BpuEI CTTGAG 1 cut(s) 1104
Bsa29I ATCGAT 1 cut(s) 700
BsaHI GRCGYC 1 cut(s) 1534
BsaJI CCNNGG 2 cut(s) 35, 155
BsaWI WCCGGW 1 cut(s) 523
Bsc4I CCNNNNNNNGG 3 cut(s) 1159, 1672, 1926
Bse118I RCCGGY 1 cut(s) 523
Bse1I ACTGG 4 cut(s) 147, 656, 992, 997
Bse3DI GCAATG 1 cut(s) 1095
BseBI CCWGG 2 cut(s) 708, 1871
BseCI ATCGAT 1 cut(s) 700
BseDI CCNNGG 2 cut(s) 35, 155
BseGI GGATG 5 cut(s) 235, 358, 781, 1220, 1600
BseLI CCNNNNNNNGG 3 cut(s) 1159, 1672, 1926
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 3 cut(s) 167, 1434, 1473
BseNI ACTGG 4 cut(s) 147, 656, 992, 997
BseRI GAGGAG 4 cut(s) 193, 446, 1532, 1622
BseSI GKGCMC 2 cut(s) 649, 1288
BseXI GCAGC 8 cut(s) 18, 64, 358, 1126, 1258, 1615, 1627, 1707
Bsh1236I CGCG 1 cut(s) 892
BshFI GGCC 1 cut(s) 1374
BshTI ACCGGT 1 cut(s) 523
BshVI ATCGAT 1 cut(s) 700
BsiHKCI CYCGRG 2 cut(s) 114, 1064
BsiSI CCGG 2 cut(s) 524, 1927
BslFI GGGAC 5 cut(s) 111, 497, 947, 1901, 1940
BslI CCNNNNNNNGG 3 cut(s) 1159, 1672, 1926
BsmFI GGGAC 5 cut(s) 111, 497, 947, 1901, 1940
BsmI GAATGC 2 cut(s) 134, 1509
BsnI GGCC 1 cut(s) 1374
BsoBI CYCGRG 2 cut(s) 114, 1064
Bsp1286I GDGCHC 2 cut(s) 649, 1288
Bsp1407I TGTACA 1 cut(s) 355
Bsp143I GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
BspACI CCGC 3 cut(s) 939, 1163, 1216
BspANI GGCC 1 cut(s) 1374
BspCNI CTCAG 3 cut(s) 168, 1435, 1474
BspDI ATCGAT 1 cut(s) 700
BspFNI CGCG 1 cut(s) 892
BspLI GGNNCC 5 cut(s) 41, 255, 858, 1678, 1777
BspMAI CTGCAG 1 cut(s) 1633
BspMI ACCTGC 1 cut(s) 376
BspPI GGATC 3 cut(s) 705, 880, 1059
BsrDI GCAATG 1 cut(s) 1095
BsrFI RCCGGY 1 cut(s) 523
BsrGI TGTACA 1 cut(s) 355
BsrI ACTGG 4 cut(s) 147, 656, 992, 997
BssAI RCCGGY 1 cut(s) 523
BssECI CCNNGG 2 cut(s) 35, 155
BssMI GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
BssNI GRCGYC 1 cut(s) 1534
BssT1I CCWWGG 1 cut(s) 155
Bst2UI CCWGG 2 cut(s) 708, 1871
Bst4CI ACNGT 8 cut(s) 164, 241, 508, 598, 613, 1102, 1383, 1817
Bst6I CTCTTC 5 cut(s) 510, 540, 567, 876, 1521
BstACI GRCGYC 1 cut(s) 1534
BstAUI TGTACA 1 cut(s) 355
BstC8I GCNNGC 2 cut(s) 1218, 1983
BstDEI CTNAG 6 cut(s) 176, 821, 1203, 1443, 1482, 1896
BstF5I GGATG 5 cut(s) 235, 358, 781, 1220, 1600
BstFNI CGCG 1 cut(s) 892
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 3 cut(s) 22, 892, 1573
BstKTI GATC 7 cut(s) 700, 742, 853, 875, 904, 1054, 1266
BstMBI GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
BstMWI GCNNNNNNNGC 7 cut(s) 28, 1169, 1444, 1625, 1637, 1690, 1720
BstNI CCWGG 2 cut(s) 708, 1871
BstNSI RCATGY 3 cut(s) 673, 1201, 1985
BstSCI CCNGG 2 cut(s) 706, 1869
BstSFI CTRYAG 1 cut(s) 1629
BstSLI GKGCMC 2 cut(s) 649, 1288
BstUI CGCG 1 cut(s) 892
BstV1I GCAGC 8 cut(s) 18, 64, 358, 1126, 1258, 1615, 1627, 1707
BstV2I GAAGAC 3 cut(s) 407, 443, 1101
BstX2I RGATCY 2 cut(s) 901, 1051
BstYI RGATCY 2 cut(s) 901, 1051
Bsu15I ATCGAT 1 cut(s) 700
BsuI GTATCC 1 cut(s) 120
BsuRI GGCC 1 cut(s) 1374
BsuTUI ATCGAT 1 cut(s) 700
BtrI CACGTC 1 cut(s) 1954
BtsCI GGATG 5 cut(s) 235, 358, 781, 1220, 1600
BtsI GCAGTG 1 cut(s) 1839
BtsIMutI CAGTG 4 cut(s) 140, 1098, 1813, 1839
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 2 cut(s) 1218, 1983
CfoI GCGC 3 cut(s) 22, 892, 1573
Cfr10I RCCGGY 1 cut(s) 523
ClaI ATCGAT 1 cut(s) 700
CseI GACGC 1 cut(s) 1523
Csp6I GTAC 7 cut(s) 10, 160, 356, 733, 1045, 1297, 1408
CspAI ACCGGT 1 cut(s) 523
CviAII CATG 8 cut(s) 73, 670, 801, 1022, 1198, 1492, 1875, 1982
CviQI GTAC 7 cut(s) 10, 160, 356, 733, 1045, 1297, 1408
DdeI CTNAG 6 cut(s) 176, 821, 1203, 1443, 1482, 1896
DpnI GATC 7 cut(s) 699, 741, 852, 874, 903, 1053, 1265
DpnII GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
EaeI YGGCCR 1 cut(s) 1372
Eam1104I CTCTTC 5 cut(s) 510, 540, 567, 876, 1521
EarI CTCTTC 5 cut(s) 510, 540, 567, 876, 1521
Eco130I CCWWGG 1 cut(s) 155
Eco57I CTGAAG 3 cut(s) 926, 1437, 1448
Eco88I CYCGRG 2 cut(s) 114, 1064
EcoRII CCWGG 2 cut(s) 706, 1869
EcoT14I CCWWGG 1 cut(s) 155
ErhI CCWWGG 1 cut(s) 155
FaeI CATG 8 cut(s) 76, 673, 804, 1025, 1201, 1495, 1878, 1985
FalI AAGNNNNNCTT 4 cut(s) 1347, 1379, 1383, 1415
FaqI GGGAC 5 cut(s) 111, 497, 947, 1901, 1940
FatI CATG 8 cut(s) 72, 669, 800, 1021, 1197, 1491, 1874, 1981
FauI CCCGC 1 cut(s) 1209
FauNDI CATATG 1 cut(s) 1276
FbaI TGATCA 1 cut(s) 850
FblI GTMKAC 1 cut(s) 968
Fnu4HI GCNGC 9 cut(s) 32, 78, 372, 1140, 1164, 1272, 1629, 1641, 1721
FokI GGATG 5 cut(s) 242, 365, 788, 1207, 1607
Fsp4HI GCNGC 9 cut(s) 32, 78, 372, 1140, 1164, 1272, 1629, 1641, 1721
FspBI CTAG 2 cut(s) 1715, 1742
GlaI GCGC 3 cut(s) 21, 891, 1572
GluI GCNGC 9 cut(s) 32, 78, 372, 1140, 1164, 1272, 1629, 1641, 1721
GsuI CTGGAG 1 cut(s) 164
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 1 cut(s) 1374
HapII CCGG 2 cut(s) 524, 1927
HgaI GACGC 1 cut(s) 1523
HhaI GCGC 3 cut(s) 22, 892, 1573
Hin1I GRCGYC 1 cut(s) 1534
Hin1II CATG 8 cut(s) 76, 673, 804, 1025, 1201, 1495, 1878, 1985
Hin6I GCGC 3 cut(s) 20, 890, 1571
HinP1I GCGC 3 cut(s) 20, 890, 1571
HindIII AAGCTT 1 cut(s) 1397
HinfI GANTC 8 cut(s) 99, 562, 794, 1034, 1040, 1545, 1810, 1848
HpaII CCGG 2 cut(s) 524, 1927
HphI GGTGA 7 cut(s) 116, 144, 313, 403, 739, 761, 1081
Hpy166II GTNNAC 2 cut(s) 969, 1195
Hpy188I TCNGA 4 cut(s) 906, 1039, 1084, 1456
Hpy188III TCNNGA 7 cut(s) 559, 743, 854, 1015, 1058, 1121, 1742
Hpy8I GTNNAC 2 cut(s) 969, 1195
Hpy99I CGWCG 1 cut(s) 1950
HpyAV CCTTC 8 cut(s) 10, 292, 409, 709, 1297, 1349, 1458, 1832
HpyCH4III ACNGT 8 cut(s) 164, 241, 508, 598, 613, 1102, 1383, 1817
HpyCH4IV ACGT 2 cut(s) 1945, 1953
HpyF10VI GCNNNNNNNGC 7 cut(s) 28, 1169, 1444, 1625, 1637, 1690, 1720
HpyF3I CTNAG 6 cut(s) 176, 821, 1203, 1443, 1482, 1896
HpySE526I ACGT 2 cut(s) 1945, 1953
Hsp92I GRCGYC 1 cut(s) 1534
Hsp92II CATG 8 cut(s) 76, 673, 804, 1025, 1201, 1495, 1878, 1985
HspAI GCGC 3 cut(s) 20, 890, 1571
Ksp22I TGATCA 1 cut(s) 850
Kzo9I GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
LmnI GCTCC 3 cut(s) 253, 1775, 1978
Lsp1109I GCAGC 8 cut(s) 18, 64, 358, 1126, 1258, 1615, 1627, 1707
LweI GCATC 4 cut(s) 1105, 1225, 1229, 1882
MaeI CTAG 2 cut(s) 1715, 1742
MaeII ACGT 2 cut(s) 1945, 1953
MaeIII GTNAC 8 cut(s) 68, 150, 496, 757, 816, 1102, 1653, 1941
MalI GATC 7 cut(s) 699, 741, 852, 874, 903, 1053, 1265
MboI GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
MfeI CAATTG 3 cut(s) 661, 1416, 1574
MflI RGATCY 2 cut(s) 901, 1051
MhlI GDGCHC 2 cut(s) 649, 1288
MlsI TGGCCA 1 cut(s) 1374
MluCI AATT 9 cut(s) 133, 339, 661, 861, 1143, 1180, 1416, 1574, 1854
MluNI TGGCCA 1 cut(s) 1374
MlyI GAGTC 2 cut(s) 93, 1539
MmeI TCCRAC 3 cut(s) 192, 255, 1808
Mox20I TGGCCA 1 cut(s) 1374
MscI TGGCCA 1 cut(s) 1374
MseI TTAA 7 cut(s) 123, 234, 530, 585, 693, 1146, 1179
MslI CAYNNNNRTG 2 cut(s) 48, 1279
Msp20I TGGCCA 1 cut(s) 1374
MspA1I CMGCKG 1 cut(s) 939
MspI CCGG 2 cut(s) 524, 1927
MspR9I CCNGG 2 cut(s) 708, 1871
MunI CAATTG 3 cut(s) 661, 1416, 1574
Mva1269I GAATGC 2 cut(s) 134, 1509
MvaI CCWGG 2 cut(s) 708, 1871
MvnI CGCG 1 cut(s) 892
MwoI GCNNNNNNNGC 7 cut(s) 28, 1169, 1444, 1625, 1637, 1690, 1720
NdeI CATATG 1 cut(s) 1276
NdeII GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
NlaIII CATG 8 cut(s) 76, 673, 804, 1025, 1201, 1495, 1878, 1985
NlaIV GGNNCC 5 cut(s) 41, 255, 858, 1678, 1777
NmeAIII GCCGAG 1 cut(s) 60
NmuCI GTSAC 3 cut(s) 150, 816, 1653
NspI RCATGY 3 cut(s) 673, 1201, 1985
PaeI GCATGC 1 cut(s) 1985
PaeR7I CTCGAG 1 cut(s) 114
PciI ACATGT 1 cut(s) 1197
PctI GAATGC 2 cut(s) 134, 1509
PfeI GAWTC 6 cut(s) 562, 794, 1034, 1040, 1810, 1848
PflMI CCANNNNNTGG 1 cut(s) 1159
PinAI ACCGGT 1 cut(s) 523
PkrI GCNGC 9 cut(s) 33, 79, 373, 1141, 1165, 1273, 1630, 1642, 1722
PleI GAGTC 2 cut(s) 93, 1539
PpsI GAGTC 2 cut(s) 93, 1539
PscI ACATGT 1 cut(s) 1197
PshBI ATTAAT 1 cut(s) 123
PsiI TTATAA 1 cut(s) 1473
Psp6I CCWGG 2 cut(s) 706, 1869
PspGI CCWGG 2 cut(s) 706, 1869
PspN4I GGNNCC 5 cut(s) 41, 255, 858, 1678, 1777
PspXI VCTCGAGB 1 cut(s) 114
PsrI GAACNNNNNNTAC 2 cut(s) 1926, 1958
PstI CTGCAG 1 cut(s) 1633
PsuI RGATCY 2 cut(s) 901, 1051
RsaI GTAC 7 cut(s) 11, 161, 357, 734, 1046, 1298, 1409
RsaNI GTAC 7 cut(s) 10, 160, 356, 733, 1045, 1297, 1408
RseI CAYNNNNRTG 2 cut(s) 48, 1279
SaqAI TTAA 7 cut(s) 123, 234, 530, 585, 693, 1146, 1179
SatI GCNGC 9 cut(s) 32, 78, 372, 1140, 1164, 1272, 1629, 1641, 1721
Sau3AI GATC 7 cut(s) 697, 739, 850, 872, 901, 1051, 1263
SchI GAGTC 2 cut(s) 93, 1539
ScrFI CCNGG 2 cut(s) 708, 1871
SduI GDGCHC 2 cut(s) 649, 1288
SfaNI GCATC 4 cut(s) 1105, 1225, 1229, 1882
SfcI CTRYAG 1 cut(s) 1629
Sfr274I CTCGAG 1 cut(s) 114
SlaI CTCGAG 1 cut(s) 114
SmiMI CAYNNNNRTG 2 cut(s) 48, 1279
SmlI CTYRAG 2 cut(s) 114, 1119
SmoI CTYRAG 2 cut(s) 114, 1119
SphI GCATGC 1 cut(s) 1985
Sse9I AATT 9 cut(s) 133, 339, 661, 861, 1143, 1180, 1416, 1574, 1854
SsiI CCGC 3 cut(s) 939, 1163, 1216
SspMI CTAG 2 cut(s) 1715, 1742
StyD4I CCNGG 2 cut(s) 706, 1869
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 8 cut(s) 164, 241, 508, 598, 613, 1102, 1383, 1817
TaiI ACGT 2 cut(s) 1948, 1956
TaqI TCGA 4 cut(s) 115, 185, 700, 1032
TasI AATT 9 cut(s) 133, 339, 661, 861, 1143, 1180, 1416, 1574, 1854
TatI WGTACW 3 cut(s) 355, 732, 1296
TauI GCSGC 1 cut(s) 1166
TfiI GAWTC 6 cut(s) 562, 794, 1034, 1040, 1810, 1848
Tru1I TTAA 7 cut(s) 123, 234, 530, 585, 693, 1146, 1179
Tru9I TTAA 7 cut(s) 123, 234, 530, 585, 693, 1146, 1179
TscAI CASTG 4 cut(s) 147, 1105, 1820, 1839
TseFI GTSAC 3 cut(s) 150, 816, 1653
TseI GCWGC 8 cut(s) 31, 77, 371, 1139, 1271, 1628, 1640, 1720
Tsp45I GTSAC 3 cut(s) 150, 816, 1653
TspGWI ACGGA 1 cut(s) 788
TspRI CASTG 4 cut(s) 147, 1105, 1820, 1839
Van91I CCANNNNNTGG 1 cut(s) 1159
VspI ATTAAT 1 cut(s) 123
XbaI TCTAGA 1 cut(s) 1741
XceI RCATGY 3 cut(s) 673, 1201, 1985
XhoI CTCGAG 1 cut(s) 114
XmiI GTMKAC 1 cut(s) 968
XspI CTAG 2 cut(s) 1715, 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.