PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25290 AT2G25290 AT2G25290 AT2G25290 |
| fragaria_vesca | FvH4_2g28600 FvH4_2g28600 FvH4_2g28600 |
| malus_domestica | MD15G1129300.v1.1 |
| prunus_persica | Prupe.1G484900_v2.0.a1 |
| pyrus_communis | pycom08g13150 pycom12646g00050 pycom15g11650 |
| rosa_chinensis | RchiOBHm_Chr6g0297371 |
| rosa_laevigata | RLG00000011607 |
| rosa_multiflora | Rmu_sc0004989.1_g000001 Rmu_sc0012701.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00170600 |
| rosa_rugosa | Rorug06G0271100 |
| rosa_samantha | Rh6AG382500 Rh6BG390600 Rh6CG395700 Rh6DG382700 |
| rosa_wichuraiana | Rw6G033320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1650 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1336 |
| AccBSI | CCGCTC | 1 cut(s) | 1708 |
| AciI | CCGC | 5 cut(s) | 551, 568, 1340, 1592, 1708 |
| AclI | AACGTT | 1 cut(s) | 1870 |
| AclWI | GGATC | 3 cut(s) | 90, 885, 1236 |
| AcuI | CTGAAG | 1 cut(s) | 1625 |
| AcyI | GRCGYC | 1 cut(s) | 1711 |
| AfaI | GTAC | 4 cut(s) | 39, 549, 1223, 1586 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1336, 1849, 2103 |
| AflII | CTTAAG | 1 cut(s) | 367 |
| AflIII | ACRYGT | 2 cut(s) | 129, 1374 |
| AgsI | TTSAA | 9 cut(s) | 206, 242, 397, 841, 895, 1192, 1419, 1436, 2029 |
| AjnI | CCWGG | 2 cut(s) | 46, 886 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1751, 1783 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1979, 2011 |
| Alw26I | GTCTC | 1 cut(s) | 912 |
| AlwI | GGATC | 3 cut(s) | 90, 885, 1236 |
| Ama87I | CYCGRG | 2 cut(s) | 306, 1547 |
| ApeKI | GCWGC | 7 cut(s) | 269, 553, 563, 846, 1316, 1817, 2119 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1814, 1846 |
| AspLEI | GCGC | 1 cut(s) | 1750 |
| AsuC2I | CCSGG | 1 cut(s) | 2129 |
| AsuHPI | GGTGA | 6 cut(s) | 308, 336, 505, 595, 941, 1130 |
| AvaI | CYCGRG | 2 cut(s) | 306, 1547 |
| BaeGI | GKGCMC | 2 cut(s) | 829, 1465 |
| BbsI | GAAGAC | 2 cut(s) | 114, 1086 |
| BbvCI | CCTCAGC | 1 cut(s) | 1659 |
| BbvI | GCAGC | 7 cut(s) | 256, 550, 565, 858, 1303, 1804, 2106 |
| BccI | CCATC | 2 cut(s) | 1109, 1330 |
| BceAI | ACGGC | 2 cut(s) | 674, 2098 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1199, 1233 |
| BciT130I | CCWGG | 2 cut(s) | 48, 888 |
| BclI | TGATCA | 2 cut(s) | 178, 1030 |
| BcnI | CCSGG | 1 cut(s) | 2129 |
| BcoDI | GTCTC | 1 cut(s) | 912 |
| BfaI | CTAG | 3 cut(s) | 348, 1613, 1892 |
| BfmI | CTRYAG | 1 cut(s) | 951 |
| BfrI | CTTAAG | 1 cut(s) | 367 |
| BglII | AGATCT | 1 cut(s) | 374 |
| BisI | GCNGC | 9 cut(s) | 270, 554, 564, 847, 1317, 1341, 1709, 1818, 2120 |
| BlpI | GCTNAGC | 1 cut(s) | 68 |
| BlsI | GCNGC | 9 cut(s) | 271, 555, 565, 848, 1318, 1342, 1710, 1819, 2121 |
| Bme1390I | CCNGG | 3 cut(s) | 48, 888, 2129 |
| BmeT110I | CYCGRG | 2 cut(s) | 306, 1547 |
| BmiI | GGNNCC | 6 cut(s) | 447, 1623, 1855, 1954, 2112, 2133 |
| BmrFI | CCNGG | 3 cut(s) | 48, 888, 2129 |
| BmrI | ACTGGG | 2 cut(s) | 24, 1468 |
| BmsI | GCATC | 4 cut(s) | 1207, 1282, 1402, 2059 |
| BmuI | ACTGGG | 2 cut(s) | 24, 1468 |
| BpiI | GAAGAC | 2 cut(s) | 114, 1086 |
| BpmI | CTGGAG | 1 cut(s) | 2129 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1659 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 68 |
| BpuEI | CTTGAG | 1 cut(s) | 1281 |
| BpuMI | CCSGG | 1 cut(s) | 2129 |
| Bsa29I | ATCGAT | 1 cut(s) | 2034 |
| BsaHI | GRCGYC | 1 cut(s) | 1711 |
| BsaI | GGTCTC | 1 cut(s) | 912 |
| BsaJI | CCNNGG | 3 cut(s) | 47, 78, 1546 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1130, 1160 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1336, 1849, 2103 |
| Bse1I | ACTGG | 4 cut(s) | 19, 1169, 1174, 1463 |
| Bse3DI | GCAATG | 4 cut(s) | 198, 1102, 1272, 1311 |
| BseBI | CCWGG | 2 cut(s) | 48, 888 |
| BseCI | ATCGAT | 1 cut(s) | 2034 |
| BseDI | CCNNGG | 3 cut(s) | 47, 78, 1546 |
| BseGI | GGATG | 3 cut(s) | 1120, 1297, 1777 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1336, 1849, 2103 |
| BseMI | GCAATG | 4 cut(s) | 198, 1102, 1272, 1311 |
| BseMII | CTCAG | 5 cut(s) | 59, 392, 1015, 1061, 1650 |
| BseNI | ACTGG | 4 cut(s) | 19, 1169, 1174, 1463 |
| BseRI | GAGGAG | 4 cut(s) | 47, 212, 1079, 1709 |
| BseSI | GKGCMC | 2 cut(s) | 829, 1465 |
| BseXI | GCAGC | 7 cut(s) | 256, 550, 565, 858, 1303, 1804, 2106 |
| BseYI | CCCAGC | 1 cut(s) | 1240 |
| BshVI | ATCGAT | 1 cut(s) | 2034 |
| BsiHKCI | CYCGRG | 2 cut(s) | 306, 1547 |
| BsiSI | CCGG | 1 cut(s) | 2128 |
| BslFI | GGGAC | 1 cut(s) | 118 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1336, 1849, 2103 |
| BsmAI | GTCTC | 1 cut(s) | 912 |
| BsmFI | GGGAC | 1 cut(s) | 118 |
| Bso31I | GGTCTC | 1 cut(s) | 912 |
| BsoBI | CYCGRG | 2 cut(s) | 306, 1547 |
| Bsp1286I | GDGCHC | 2 cut(s) | 829, 1465 |
| Bsp143I | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 68 |
| BspACI | CCGC | 5 cut(s) | 551, 568, 1340, 1592, 1708 |
| BspCNI | CTCAG | 5 cut(s) | 60, 391, 1014, 1062, 1651 |
| BspDI | ATCGAT | 1 cut(s) | 2034 |
| BspHI | TCATGA | 2 cut(s) | 181, 1234 |
| BspLI | GGNNCC | 6 cut(s) | 447, 1623, 1855, 1954, 2112, 2133 |
| BspPI | GGATC | 3 cut(s) | 90, 885, 1236 |
| BspQI | GCTCTTC | 1 cut(s) | 1698 |
| BspTI | CTTAAG | 1 cut(s) | 367 |
| BspTNI | GGTCTC | 1 cut(s) | 912 |
| BsrBI | CCGCTC | 1 cut(s) | 1708 |
| BsrDI | GCAATG | 4 cut(s) | 198, 1102, 1272, 1311 |
| BsrI | ACTGG | 4 cut(s) | 19, 1169, 1174, 1463 |
| BssECI | CCNNGG | 3 cut(s) | 47, 78, 1546 |
| BssMI | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| BssNI | GRCGYC | 1 cut(s) | 1711 |
| Bst2UI | CCWGG | 2 cut(s) | 48, 888 |
| Bst4CI | ACNGT | 7 cut(s) | 356, 433, 793, 1279, 1560, 1858, 1994 |
| Bst6I | CTCTTC | 3 cut(s) | 651, 735, 1698 |
| BstACI | GRCGYC | 1 cut(s) | 1711 |
| BstAFI | CTTAAG | 1 cut(s) | 367 |
| BstC8I | GCNNGC | 7 cut(s) | 58, 74, 568, 1450, 1682, 1815, 2160 |
| BstDEI | CTNAG | 9 cut(s) | 68, 378, 458, 1001, 1070, 1091, 1380, 1659, 2073 |
| BstF5I | GGATG | 3 cut(s) | 1120, 1297, 1777 |
| BstHHI | GCGC | 1 cut(s) | 1750 |
| BstKTI | GATC | 7 cut(s) | 85, 181, 377, 880, 1033, 1231, 1443 |
| BstMAI | GTCTC | 1 cut(s) | 912 |
| BstMBI | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 73, 1346, 1814, 2119 |
| BstNI | CCWGG | 2 cut(s) | 48, 888 |
| BstNSI | RCATGY | 7 cut(s) | 133, 276, 734, 764, 1378, 1684, 2162 |
| BstSCI | CCNGG | 3 cut(s) | 46, 886, 2127 |
| BstSFI | CTRYAG | 1 cut(s) | 951 |
| BstSLI | GKGCMC | 2 cut(s) | 829, 1465 |
| BstV1I | GCAGC | 7 cut(s) | 256, 550, 565, 858, 1303, 1804, 2106 |
| BstV2I | GAAGAC | 2 cut(s) | 114, 1086 |
| BstX2I | RGATCY | 2 cut(s) | 374, 1228 |
| BstYI | RGATCY | 2 cut(s) | 374, 1228 |
| Bsu15I | ATCGAT | 1 cut(s) | 2034 |
| BsuTUI | ATCGAT | 1 cut(s) | 2034 |
| BtsCI | GGATG | 3 cut(s) | 1120, 1297, 1777 |
| BtsI | GCAGTG | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 4 cut(s) | 111, 386, 1275, 1990 |
| Cac8I | GCNNGC | 7 cut(s) | 58, 74, 568, 1450, 1682, 1815, 2160 |
| CciI | TCATGA | 2 cut(s) | 181, 1234 |
| CfoI | GCGC | 1 cut(s) | 1750 |
| ClaI | ATCGAT | 1 cut(s) | 2034 |
| CseI | GACGC | 2 cut(s) | 1700, 2111 |
| Csp6I | GTAC | 4 cut(s) | 38, 548, 1222, 1585 |
| CviQI | GTAC | 4 cut(s) | 38, 548, 1222, 1585 |
| DdeI | CTNAG | 9 cut(s) | 68, 378, 458, 1001, 1070, 1091, 1380, 1659, 2073 |
| DpnI | GATC | 7 cut(s) | 84, 180, 376, 879, 1032, 1230, 1442 |
| DpnII | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| DraI | TTTAAA | 1 cut(s) | 1783 |
| Eam1104I | CTCTTC | 3 cut(s) | 651, 735, 1698 |
| EarI | CTCTTC | 3 cut(s) | 651, 735, 1698 |
| Eco31I | GGTCTC | 1 cut(s) | 912 |
| Eco57I | CTGAAG | 1 cut(s) | 1625 |
| Eco88I | CYCGRG | 2 cut(s) | 306, 1547 |
| EcoRII | CCWGG | 2 cut(s) | 46, 886 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1524, 1556, 1560, 1592 |
| FaqI | GGGAC | 1 cut(s) | 118 |
| FauI | CCCGC | 1 cut(s) | 575 |
| FbaI | TGATCA | 2 cut(s) | 178, 1030 |
| Fnu4HI | GCNGC | 9 cut(s) | 270, 554, 564, 847, 1317, 1341, 1709, 1818, 2120 |
| FokI | GGATG | 3 cut(s) | 1127, 1304, 1784 |
| Fsp4HI | GCNGC | 9 cut(s) | 270, 554, 564, 847, 1317, 1341, 1709, 1818, 2120 |
| FspBI | CTAG | 3 cut(s) | 348, 1613, 1892 |
| GlaI | GCGC | 1 cut(s) | 1749 |
| GluI | GCNGC | 9 cut(s) | 270, 554, 564, 847, 1317, 1341, 1709, 1818, 2120 |
| GsaI | CCCAGC | 1 cut(s) | 1244 |
| GsuI | CTGGAG | 1 cut(s) | 2129 |
| HapII | CCGG | 1 cut(s) | 2128 |
| HgaI | GACGC | 2 cut(s) | 1700, 2111 |
| HhaI | GCGC | 1 cut(s) | 1750 |
| Hin1I | GRCGYC | 1 cut(s) | 1711 |
| Hin6I | GCGC | 1 cut(s) | 1748 |
| HinP1I | GCGC | 1 cut(s) | 1748 |
| HindIII | AAGCTT | 2 cut(s) | 96, 1574 |
| HinfI | GANTC | 5 cut(s) | 232, 974, 1211, 1424, 1722 |
| HpaII | CCGG | 1 cut(s) | 2128 |
| HphI | GGTGA | 6 cut(s) | 308, 336, 505, 595, 941, 1130 |
| Hpy166II | GTNNAC | 2 cut(s) | 1149, 1372 |
| Hpy188I | TCNGA | 5 cut(s) | 82, 1216, 1261, 1633, 2136 |
| Hpy188III | TCNNGA | 8 cut(s) | 182, 518, 1028, 1034, 1192, 1235, 1298, 1406 |
| Hpy8I | GTNNAC | 2 cut(s) | 1149, 1372 |
| Hpy99I | CGWCG | 1 cut(s) | 2127 |
| HpyCH4III | ACNGT | 7 cut(s) | 356, 433, 793, 1279, 1560, 1858, 1994 |
| HpyCH4IV | ACGT | 1 cut(s) | 1870 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 73, 1346, 1814, 2119 |
| HpyF3I | CTNAG | 9 cut(s) | 68, 378, 458, 1001, 1070, 1091, 1380, 1659, 2073 |
| HpySE526I | ACGT | 1 cut(s) | 1870 |
| Hsp92I | GRCGYC | 1 cut(s) | 1711 |
| HspAI | GCGC | 1 cut(s) | 1748 |
| Ksp22I | TGATCA | 2 cut(s) | 178, 1030 |
| Kzo9I | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| LguI | GCTCTTC | 1 cut(s) | 1698 |
| LmnI | GCTCC | 5 cut(s) | 1066, 1621, 1952, 2110, 2155 |
| Lsp1109I | GCAGC | 7 cut(s) | 256, 550, 565, 858, 1303, 1804, 2106 |
| LweI | GCATC | 4 cut(s) | 1207, 1282, 1402, 2059 |
| MaeI | CTAG | 3 cut(s) | 348, 1613, 1892 |
| MaeII | ACGT | 1 cut(s) | 1870 |
| MaeIII | GTNAC | 8 cut(s) | 155, 691, 721, 781, 937, 996, 1279, 1830 |
| MalI | GATC | 7 cut(s) | 84, 180, 376, 879, 1032, 1230, 1442 |
| MbiI | CCGCTC | 1 cut(s) | 1708 |
| MboI | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| MfeI | CAATTG | 2 cut(s) | 1284, 1751 |
| MflI | RGATCY | 2 cut(s) | 374, 1228 |
| MhlI | GDGCHC | 2 cut(s) | 829, 1465 |
| MluCI | AATT | 9 cut(s) | 325, 531, 841, 959, 1041, 1284, 1357, 1751, 1760 |
| MlyI | GAGTC | 1 cut(s) | 1716 |
| MmeI | TCCRAC | 4 cut(s) | 384, 1576, 1985, 2133 |
| MseI | TTAA | 9 cut(s) | 197, 368, 426, 596, 765, 795, 909, 1356, 1782 |
| MslI | CAYNNNNRTG | 3 cut(s) | 128, 186, 1685 |
| MspCI | CTTAAG | 1 cut(s) | 367 |
| MspI | CCGG | 1 cut(s) | 2128 |
| MspR9I | CCNGG | 3 cut(s) | 48, 888, 2129 |
| MunI | CAATTG | 2 cut(s) | 1284, 1751 |
| MvaI | CCWGG | 2 cut(s) | 48, 888 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 73, 1346, 1814, 2119 |
| NciI | CCSGG | 1 cut(s) | 2129 |
| NdeII | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| NlaIV | GGNNCC | 6 cut(s) | 447, 1623, 1855, 1954, 2112, 2133 |
| NmuCI | GTSAC | 2 cut(s) | 996, 1830 |
| NspI | RCATGY | 7 cut(s) | 133, 276, 734, 764, 1378, 1684, 2162 |
| PaeI | GCATGC | 2 cut(s) | 1684, 2162 |
| PaeR7I | CTCGAG | 1 cut(s) | 306 |
| PagI | TCATGA | 2 cut(s) | 181, 1234 |
| PciI | ACATGT | 2 cut(s) | 129, 1374 |
| PciSI | GCTCTTC | 1 cut(s) | 1698 |
| PfeI | GAWTC | 4 cut(s) | 232, 974, 1211, 1424 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1336 |
| PkrI | GCNGC | 9 cut(s) | 271, 555, 565, 848, 1318, 1342, 1710, 1819, 2121 |
| PleI | GAGTC | 1 cut(s) | 1716 |
| PpsI | GAGTC | 1 cut(s) | 1716 |
| PscI | ACATGT | 2 cut(s) | 129, 1374 |
| PsiI | TTATAA | 1 cut(s) | 1650 |
| Psp1406I | AACGTT | 1 cut(s) | 1870 |
| Psp6I | CCWGG | 2 cut(s) | 46, 886 |
| PspFI | CCCAGC | 1 cut(s) | 1240 |
| PspGI | CCWGG | 2 cut(s) | 46, 886 |
| PspN4I | GGNNCC | 6 cut(s) | 447, 1623, 1855, 1954, 2112, 2133 |
| PspXI | VCTCGAGB | 1 cut(s) | 306 |
| PsuI | RGATCY | 2 cut(s) | 374, 1228 |
| RsaI | GTAC | 4 cut(s) | 39, 549, 1223, 1586 |
| RsaNI | GTAC | 4 cut(s) | 38, 548, 1222, 1585 |
| RseI | CAYNNNNRTG | 3 cut(s) | 128, 186, 1685 |
| SapI | GCTCTTC | 1 cut(s) | 1698 |
| SaqAI | TTAA | 9 cut(s) | 197, 368, 426, 596, 765, 795, 909, 1356, 1782 |
| SatI | GCNGC | 9 cut(s) | 270, 554, 564, 847, 1317, 1341, 1709, 1818, 2120 |
| Sau3AI | GATC | 7 cut(s) | 82, 178, 374, 877, 1030, 1228, 1440 |
| SchI | GAGTC | 1 cut(s) | 1716 |
| ScrFI | CCNGG | 3 cut(s) | 48, 888, 2129 |
| SduI | GDGCHC | 2 cut(s) | 829, 1465 |
| SfaNI | GCATC | 4 cut(s) | 1207, 1282, 1402, 2059 |
| SfcI | CTRYAG | 1 cut(s) | 951 |
| Sfr274I | CTCGAG | 1 cut(s) | 306 |
| SlaI | CTCGAG | 1 cut(s) | 306 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 128, 186, 1685 |
| SmlI | CTYRAG | 3 cut(s) | 306, 367, 1296 |
| SmoI | CTYRAG | 3 cut(s) | 306, 367, 1296 |
| SphI | GCATGC | 2 cut(s) | 1684, 2162 |
| Sse9I | AATT | 9 cut(s) | 325, 531, 841, 959, 1041, 1284, 1357, 1751, 1760 |
| SsiI | CCGC | 5 cut(s) | 551, 568, 1340, 1592, 1708 |
| SspMI | CTAG | 3 cut(s) | 348, 1613, 1892 |
| StyD4I | CCNGG | 3 cut(s) | 46, 886, 2127 |
| TaaI | ACNGT | 7 cut(s) | 356, 433, 793, 1279, 1560, 1858, 1994 |
| TaiI | ACGT | 1 cut(s) | 1873 |
| TaqI | TCGA | 5 cut(s) | 85, 307, 1209, 1563, 2034 |
| TasI | AATT | 9 cut(s) | 325, 531, 841, 959, 1041, 1284, 1357, 1751, 1760 |
| TauI | GCSGC | 2 cut(s) | 1343, 1711 |
| TfiI | GAWTC | 4 cut(s) | 232, 974, 1211, 1424 |
| Tru1I | TTAA | 9 cut(s) | 197, 368, 426, 596, 765, 795, 909, 1356, 1782 |
| Tru9I | TTAA | 9 cut(s) | 197, 368, 426, 596, 765, 795, 909, 1356, 1782 |
| TscAI | CASTG | 4 cut(s) | 118, 386, 1282, 1997 |
| TseFI | GTSAC | 2 cut(s) | 996, 1830 |
| TseI | GCWGC | 7 cut(s) | 269, 553, 563, 846, 1316, 1817, 2119 |
| Tsp45I | GTSAC | 2 cut(s) | 996, 1830 |
| TspGWI | ACGGA | 2 cut(s) | 1634, 1979 |
| TspRI | CASTG | 4 cut(s) | 118, 386, 1282, 1997 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1336 |
| Vha464I | CTTAAG | 1 cut(s) | 367 |
| XceI | RCATGY | 7 cut(s) | 133, 276, 734, 764, 1378, 1684, 2162 |
| XhoI | CTCGAG | 1 cut(s) | 306 |
| XspI | CTAG | 3 cut(s) | 348, 1613, 1892 |