Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0008683

Physical Location & Seq

Genomic Coordinates Forward (+)

41866343 .. 41870982

Gene Structure 4640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0271100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGCGTCCCCGGCGGTGCAGCAGCAAGTAGCTCCTACTGCCGATGTGGTTGGCAATGCGTTTGTTCTTCAGTACTACCATATCTTGGAGCAGTCTCCTGAGCATGTTTACCGATTTTATCAAGATGATAGTAAGTTTGGTCGCCCTGAGGATAATGGGATGATGAAGACTGTAACCACCATGGATATAATCAACAGGAAAATAGTTGAGAATGGGAAGCTCAGTGCAAATGTTGTAACTGTGGATGCTCAAGAATCTTTCAATAGGGGTGTATTTGTCCTTGTGACTGGGTTTATAATTGGAAAGGACAATTTGAGGAAAAAATTTACCCAAAGCTTTTTCTTGGCACCACAAGAGAAAGGTGGCTTCTATGTTTTGAATGATGTTTTCAGATATGTGGATGATTCCATTCACCAAAATACGGACCATGGTTCAGTTGCTGATGTTGAACCTCCTCTTACTTCGGAGCACGATCCTTCTTTTCCAGACAGTCGTGTTTCTGAGCCTGTTACTGCTGTTTCTGAAGACGTCACTGTGGAGGAAGTATATAATCCTCCTGAGAATGGGGAAGTTCCAATTGAAGTAGAGGAAATTCCAGTACCTGAAGTTGTCGATGAAATCCCAGATGATTCAGAGGTAGTGACTGAATCTGGATACTCGGCACCGGTTGTGGCCATGGTGGAATCTGAGAAACCTGCATCGGTGGTGGACGATGCTAAATACTCAGCAACTGTGGTGGCTGAAGCTGGACGTTCTGCACCGGTGGTGGCAGAATCTGTACATTCGGCACCGGTGGTGGTCGGATCTACTCCTAAATCAGAAGTGCCTAAGAAGTCATATGCCTCAATTGTTAAGGTTATGAAGGAGAGTGCTTTACCATTTTCTACTCCTGCACATGCTTCTGTGAGAGCTATCCCAAAGCCCCAAGAGCAGCGGGTCATTGCTGCTCCACAACCTGCTTCAATTTCTGAAACAGTAGTTTCCAGCACAAATGCTAAAGAAGATGGGAACCAACCAGAGGCTGAAGTTGAAGGGCACTCTATCTACATCAAAGGTCTGCCTTTTAATGCCACACCTGCTCTAATAGAGAATGAATTCAAAAAATTTGGACCCATCAAGAACGGTGGTGTACAAGTTAGAACTCAAAAGGGCTTTGGTTTTGGGTTTGTGGAATTTGAGGATGCAAGTGCTGTACAAAGTGCACTAGAGGCTTCACCCATCATGATTAATGGACGCCAAGTTGTTGTTGAGGAAAAGAGATCTACGAGTCGAGGGGGGAATAGGGGAAGGTTTTCGTCTGGAAGGGGGAGTGGATACAGGAATGAAGGATCTAATGGGTACAGGAATGAAGGAGCTAATGGGTTCAGAAATGATGGACCTAATGCTGGATACCGAAATGATGCACCTAATGGATACCGGAGTGAGGGACCAAGAGGACGTGGAGGCTATGGAGGTGGTAGAGGTTATGGCCGCAGCGAATTCAAGTCCGAATTTGGAGGTAGGAATACAGGTAGGGGAGGATCATCGGGCCGTGGAGGTGATGGGTATCAGAGGTCTGAGAATGGTGGTCGAGTGAATCGTGCTGGTGGGCCGACTGTTAATGCAGCAGCCAAAAGTTCAGCTCCCCGGGTGTCTGCTTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box F-box-like

Protein Analysis

548

Amino Acids

58.57

Weight (kDa)

5.34

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	17 - 132	2.2e-27	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	348 - 413	1.1e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25290 AT2G25290 AT2G25290 AT2G25290
fragaria_vesca	FvH4_2g28600 FvH4_2g28600 FvH4_2g28600
malus_domestica	MD15G1129300.v1.1
prunus_persica	Prupe.1G484900_v2.0.a1
pyrus_communis	pycom08g13150 pycom12646g00050 pycom15g11650
rosa_chinensis	RchiOBHm_Chr6g0297371
rosa_laevigata	RLG00000011607
rosa_multiflora	Rmu_sc0004989.1_g000001 Rmu_sc0012701.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170600
rosa_rugosa	Rorug06G0271100
rosa_samantha	Rh6AG382500 Rh6BG390600 Rh6CG395700 Rh6DG382700
rosa_wichuraiana	Rw6G033320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	296
AarI	CACCTGC	1 cut(s)	1084
AatII	GACGTC	1 cut(s)	531
Acc36I	ACCTGC	3 cut(s)	703, 964, 1084
AccB1I	GGYRCC	3 cut(s)	346, 661, 787
AccB7I	CCANNNNNTGG	1 cut(s)	85
AciI	CCGC	3 cut(s)	14, 934, 1471
AclWI	GGATC	4 cut(s)	467, 811, 1336, 1528
AcoI	YGGCCR	2 cut(s)	672, 1468
AcsI	RAATTY	7 cut(s)	323, 591, 1094, 1103, 1172, 1478, 1490
AcuI	CTGAAG	5 cut(s)	53, 543, 624, 762, 1044
AcyI	GRCGYC	3 cut(s)	5, 528, 1234
AfaI	GTAC	6 cut(s)	74, 600, 780, 1131, 1194, 1340
AfiI	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1018, 1385, 1423
AgeI	ACCGGT	3 cut(s)	664, 760, 790
AgsI	TTSAA	8 cut(s)	262, 379, 449, 581, 963, 1031, 1099, 1483
AjiI	CACGTC	1 cut(s)	1439
AluBI	AGCT	7 cut(s)	32, 220, 336, 746, 911, 1355, 1622
AluI	AGCT	7 cut(s)	32, 220, 336, 746, 911, 1355, 1622
Alw21I	GWGCWC	2 cut(s)	471, 1204
Alw26I	GTCTC	1 cut(s)	99
Alw44I	GTGCAC	1 cut(s)	1200
AlwI	GGATC	4 cut(s)	467, 811, 1336, 1528
AlwNI	CAGNNNCTG	5 cut(s)	440, 602, 731, 776, 1022
Ama87I	CYCGRG	1 cut(s)	1626
AoxI	GGCC	4 cut(s)	672, 1468, 1528, 1589
ApaLI	GTGCAC	1 cut(s)	1200
ApeKI	GCWGC	7 cut(s)	19, 22, 931, 944, 1473, 1604, 1607
ApoI	RAATTY	7 cut(s)	323, 591, 1094, 1103, 1172, 1478, 1490
AseI	ATTAAT	1 cut(s)	1227
AsiGI	ACCGGT	3 cut(s)	664, 760, 790
Asp700I	GAANNNNTTC	2 cut(s)	1094, 1291
AspS9I	GGNCC	6 cut(s)	424, 1109, 1376, 1427, 1528, 1589
AsuC2I	CCSGG	3 cut(s)	11, 1627, 1628
AsuHPI	GGTGA	3 cut(s)	404, 1206, 1550
AvaI	CYCGRG	1 cut(s)	1626
AvaII	GGWCC	4 cut(s)	424, 1109, 1376, 1427
AxyI	CCTNAGG	1 cut(s)	147
BaeGI	GKGCMC	2 cut(s)	1038, 1204
BaeI	ACNNNNGTAYC	2 cut(s)	1405, 1438
BalI	TGGCCA	1 cut(s)	674
BanI	GGYRCC	3 cut(s)	346, 661, 787
BbsI	GAAGAC	2 cut(s)	173, 531
Bbv12I	GWGCWC	2 cut(s)	471, 1204
BbvI	GCAGC	7 cut(s)	31, 34, 931, 943, 1485, 1616, 1619
BccI	CCATC	5 cut(s)	998, 1121, 1226, 1367, 1535
BceAI	ACGGC	1 cut(s)	1515
BciVI	GTATCC	4 cut(s)	647, 1307, 1382, 1406
BcnI	CCSGG	3 cut(s)	11, 1627, 1628
BcoDI	GTCTC	1 cut(s)	99
BfaI	CTAG	1 cut(s)	1205
BfuAI	ACCTGC	3 cut(s)	703, 964, 1084
BfuI	GTATCC	4 cut(s)	647, 1307, 1382, 1406
BglII	AGATCT	1 cut(s)	1259
BisI	GCNGC	8 cut(s)	20, 23, 932, 945, 1471, 1474, 1605, 1608
BlsI	GCNGC	8 cut(s)	21, 24, 933, 946, 1472, 1475, 1606, 1609
BmcAI	AGTACT	1 cut(s)	74
Bme1390I	CCNGG	3 cut(s)	11, 1627, 1628
Bme18I	GGWCC	4 cut(s)	424, 1109, 1376, 1427
BmeT110I	CYCGRG	1 cut(s)	1626
BmgBI	CACGTC	1 cut(s)	1439
BmgT120I	GGNCC	6 cut(s)	424, 1109, 1376, 1427, 1528, 1589
BmiI	GGNNCC	6 cut(s)	348, 663, 789, 1010, 1111, 1428
BmrFI	CCNGG	3 cut(s)	11, 1627, 1628
BmrI	ACTGGG	1 cut(s)	297
BmsI	GCATC	5 cut(s)	235, 703, 707, 1171, 1390
BmuI	ACTGGG	1 cut(s)	297
BpiI	GAAGAC	2 cut(s)	173, 531
Bpu10I	CCTNAGC	1 cut(s)	99
BpuEI	CTTGAG	1 cut(s)	234
BpuMI	CCSGG	3 cut(s)	11, 1627, 1628
BsaBI	GATNNNNATC	1 cut(s)	1545
BsaHI	GRCGYC	3 cut(s)	5, 528, 1234
BsaJI	CCNNGG	7 cut(s)	9, 180, 427, 675, 1531, 1625, 1626
BsaWI	WCCGGW	4 cut(s)	664, 760, 790, 1416
Bsc4I	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1018, 1385, 1423
Bse118I	RCCGGY	3 cut(s)	664, 760, 790
Bse1I	ACTGG	2 cut(s)	292, 596
Bse21I	CCTNAGG	1 cut(s)	147
Bse3DI	GCAATG	2 cut(s)	61, 939
Bse8I	GATNNNNATC	1 cut(s)	1545
BseDI	CCNNGG	7 cut(s)	9, 180, 427, 675, 1531, 1625, 1626
BseGI	GGATG	4 cut(s)	165, 250, 406, 1186
BseJI	GATNNNNATC	1 cut(s)	1545
BseLI	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1018, 1385, 1423
BseMI	GCAATG	2 cut(s)	61, 939
BseMII	CTCAG	8 cut(s)	90, 138, 235, 492, 549, 678, 738, 1548
BseNI	ACTGG	2 cut(s)	292, 596
BseRI	GAGGAG	1 cut(s)	444
BseSI	GKGCMC	2 cut(s)	1038, 1204
BseXI	GCAGC	7 cut(s)	31, 34, 931, 943, 1485, 1616, 1619
BsgI	GTGCAG	3 cut(s)	38, 741, 876
BshFI	GGCC	4 cut(s)	674, 1470, 1530, 1591
BshNI	GGYRCC	3 cut(s)	346, 661, 787
BshTI	ACCGGT	3 cut(s)	664, 760, 790
BsiHKAI	GWGCWC	2 cut(s)	471, 1204
BsiHKCI	CYCGRG	1 cut(s)	1626
BsiSI	CCGG	6 cut(s)	11, 665, 761, 791, 1417, 1627
BslFI	GGGAC	1 cut(s)	1440
BslI	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1018, 1385, 1423
BsmAI	GTCTC	1 cut(s)	99
BsmFI	GGGAC	1 cut(s)	1440
BsnI	GGCC	4 cut(s)	674, 1470, 1530, 1591
BsoBI	CYCGRG	1 cut(s)	1626
Bsp1286I	GDGCHC	3 cut(s)	471, 1038, 1204
Bsp1407I	TGTACA	3 cut(s)	778, 1129, 1192
Bsp143I	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
Bsp19I	CCATGG	3 cut(s)	180, 427, 675
BspACI	CCGC	3 cut(s)	14, 934, 1471
BspANI	GGCC	4 cut(s)	674, 1470, 1530, 1591
BspCNI	CTCAG	8 cut(s)	91, 139, 234, 493, 550, 679, 737, 1549
BspHI	TCATGA	1 cut(s)	1221
BspLI	GGNNCC	6 cut(s)	348, 663, 789, 1010, 1111, 1428
BspMI	ACCTGC	3 cut(s)	703, 964, 1084
BspPI	GGATC	4 cut(s)	467, 811, 1336, 1528
BspT107I	GGYRCC	3 cut(s)	346, 661, 787
BsrDI	GCAATG	2 cut(s)	61, 939
BsrFI	RCCGGY	3 cut(s)	664, 760, 790
BsrGI	TGTACA	3 cut(s)	778, 1129, 1192
BsrI	ACTGG	2 cut(s)	292, 596
BssAI	RCCGGY	3 cut(s)	664, 760, 790
BssECI	CCNNGG	7 cut(s)	9, 180, 427, 675, 1531, 1625, 1626
BssMI	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
BssNI	GRCGYC	3 cut(s)	5, 528, 1234
BssT1I	CCWWGG	3 cut(s)	180, 427, 675
Bst4CI	ACNGT	8 cut(s)	172, 241, 491, 535, 733, 976, 1124, 1597
BstACI	GRCGYC	3 cut(s)	5, 528, 1234
BstAUI	TGTACA	3 cut(s)	778, 1129, 1192
BstDEI	CTNAG	9 cut(s)	99, 147, 221, 501, 558, 687, 724, 828, 1557
BstDSI	CCRYGG	4 cut(s)	180, 427, 675, 1531
BstF5I	GGATG	4 cut(s)	165, 250, 406, 1186
BstKTI	GATC	5 cut(s)	475, 806, 1262, 1331, 1523
BstMAI	GTCTC	1 cut(s)	99
BstMBI	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 38, 928, 1076, 1208
BstNSI	RCATGY	2 cut(s)	107, 899
BstSCI	CCNGG	3 cut(s)	9, 1625, 1626
BstSLI	GKGCMC	2 cut(s)	1038, 1204
BstV1I	GCAGC	7 cut(s)	31, 34, 931, 943, 1485, 1616, 1619
BstV2I	GAAGAC	2 cut(s)	173, 531
BstX2I	RGATCY	3 cut(s)	803, 1259, 1328
BstYI	RGATCY	3 cut(s)	803, 1259, 1328
Bsu36I	CCTNAGG	1 cut(s)	147
BsuI	GTATCC	4 cut(s)	647, 1307, 1382, 1406
BsuRI	GGCC	4 cut(s)	674, 1470, 1530, 1591
BtgI	CCRYGG	4 cut(s)	180, 427, 675, 1531
BtrI	CACGTC	1 cut(s)	1439
BtsCI	GGATG	4 cut(s)	165, 250, 406, 1186
BtsIMutI	CAGTG	2 cut(s)	229, 531
BveI	ACCTGC	3 cut(s)	703, 964, 1084
CaiI	CAGNNNCTG	5 cut(s)	440, 602, 731, 776, 1022
CciI	TCATGA	1 cut(s)	1221
Cfr10I	RCCGGY	3 cut(s)	664, 760, 790
Cfr13I	GGNCC	6 cut(s)	424, 1109, 1376, 1427, 1528, 1589
Cfr9I	CCCGGG	1 cut(s)	1626
CseI	GACGC	1 cut(s)	1242
Csp6I	GTAC	6 cut(s)	73, 599, 779, 1130, 1193, 1339
CspAI	ACCGGT	3 cut(s)	664, 760, 790
CspCI	CAANNNNNGTGG	4 cut(s)	717, 752, 1105, 1140
CviAII	CATG	6 cut(s)	104, 181, 428, 676, 896, 1222
CviQI	GTAC	6 cut(s)	73, 599, 779, 1130, 1193, 1339
DdeI	CTNAG	9 cut(s)	99, 147, 221, 501, 558, 687, 724, 828, 1557
DpnI	GATC	5 cut(s)	474, 805, 1261, 1330, 1522
DpnII	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
EaeI	YGGCCR	2 cut(s)	672, 1468
Eco130I	CCWWGG	3 cut(s)	180, 427, 675
Eco47I	GGWCC	4 cut(s)	424, 1109, 1376, 1427
Eco57I	CTGAAG	5 cut(s)	53, 543, 624, 762, 1044
Eco81I	CCTNAGG	1 cut(s)	147
Eco88I	CYCGRG	1 cut(s)	1626
EcoRI	GAATTC	2 cut(s)	1094, 1478
EcoT14I	CCWWGG	3 cut(s)	180, 427, 675
ErhI	CCWWGG	3 cut(s)	180, 427, 675
FaeI	CATG	6 cut(s)	107, 184, 431, 679, 899, 1225
FaqI	GGGAC	1 cut(s)	1440
FatI	CATG	6 cut(s)	103, 180, 427, 675, 895, 1221
FauI	CCCGC	1 cut(s)	927
FauNDI	CATATG	1 cut(s)	838
Fnu4HI	GCNGC	8 cut(s)	20, 23, 932, 945, 1471, 1474, 1605, 1608
FokI	GGATG	4 cut(s)	172, 257, 413, 1193
Fsp4HI	GCNGC	8 cut(s)	20, 23, 932, 945, 1471, 1474, 1605, 1608
FspBI	CTAG	1 cut(s)	1205
GluI	GCNGC	8 cut(s)	20, 23, 932, 945, 1471, 1474, 1605, 1608
HaeIII	GGCC	4 cut(s)	674, 1470, 1530, 1591
HapII	CCGG	6 cut(s)	11, 665, 761, 791, 1417, 1627
HgaI	GACGC	1 cut(s)	1242
Hin1I	GRCGYC	3 cut(s)	5, 528, 1234
Hin1II	CATG	6 cut(s)	107, 184, 431, 679, 899, 1225
HindIII	AAGCTT	1 cut(s)	334
HinfI	GANTC	8 cut(s)	254, 404, 629, 647, 683, 773, 1267, 1576
HpaII	CCGG	6 cut(s)	11, 665, 761, 791, 1417, 1627
HphI	GGTGA	3 cut(s)	404, 1206, 1550
Hpy166II	GTNNAC	4 cut(s)	109, 709, 1130, 1202
Hpy188III	TCNNGA	9 cut(s)	98, 122, 251, 485, 557, 651, 1117, 1222, 1299
Hpy8I	GTNNAC	4 cut(s)	109, 709, 1130, 1202
HpyAV	CCTTC	7 cut(s)	486, 856, 1025, 1281, 1296, 1319, 1343
HpyCH4III	ACNGT	8 cut(s)	172, 241, 491, 535, 733, 976, 1124, 1597
HpyCH4IV	ACGT	3 cut(s)	528, 751, 1438
HpyCH4V	TGCA	9 cut(s)	19, 227, 698, 758, 893, 1184, 1202, 1403, 1604
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 38, 928, 1076, 1208
HpyF3I	CTNAG	9 cut(s)	99, 147, 221, 501, 558, 687, 724, 828, 1557
HpySE526I	ACGT	3 cut(s)	528, 751, 1438
Hsp92I	GRCGYC	3 cut(s)	5, 528, 1234
Hsp92II	CATG	6 cut(s)	107, 184, 431, 679, 899, 1225
Kzo9I	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
LmnI	GCTCC	6 cut(s)	37, 88, 466, 952, 1352, 1627
Lsp1109I	GCAGC	7 cut(s)	31, 34, 931, 943, 1485, 1616, 1619
LweI	GCATC	5 cut(s)	235, 703, 707, 1171, 1390
MaeI	CTAG	1 cut(s)	1205
MaeII	ACGT	3 cut(s)	528, 751, 1438
MaeIII	GTNAC	6 cut(s)	172, 235, 283, 508, 529, 640
MalI	GATC	5 cut(s)	474, 805, 1261, 1330, 1522
MboI	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
MboII	GAAGA	4 cut(s)	59, 178, 536, 1013
MfeI	CAATTG	2 cut(s)	576, 846
MflI	RGATCY	3 cut(s)	803, 1259, 1328
MhlI	GDGCHC	3 cut(s)	471, 1038, 1204
MlsI	TGGCCA	1 cut(s)	674
MluNI	TGGCCA	1 cut(s)	674
MlyI	GAGTC	1 cut(s)	1276
MmeI	TCCRAC	1 cut(s)	781
Mox20I	TGGCCA	1 cut(s)	674
MroXI	GAANNNNTTC	2 cut(s)	1094, 1291
MscI	TGGCCA	1 cut(s)	674
MseI	TTAA	4 cut(s)	852, 1065, 1227, 1599
Msp20I	TGGCCA	1 cut(s)	674
MspA1I	CMGCKG	1 cut(s)	934
MspI	CCGG	6 cut(s)	11, 665, 761, 791, 1417, 1627
MspR9I	CCNGG	3 cut(s)	11, 1627, 1628
MunI	CAATTG	2 cut(s)	576, 846
MwoI	GCNNNNNNNGC	5 cut(s)	11, 38, 928, 1076, 1208
NciI	CCSGG	3 cut(s)	11, 1627, 1628
NcoI	CCATGG	3 cut(s)	180, 427, 675
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
NlaIII	CATG	6 cut(s)	107, 184, 431, 679, 899, 1225
NlaIV	GGNNCC	6 cut(s)	348, 663, 789, 1010, 1111, 1428
NmeAIII	GCCGAG	1 cut(s)	638
NmuCI	GTSAC	3 cut(s)	283, 529, 640
NspI	RCATGY	2 cut(s)	107, 899
PagI	TCATGA	1 cut(s)	1221
PaqCI	CACCTGC	1 cut(s)	1084
PcsI	WCGNNNNNNNCGW	1 cut(s)	1576
PdmI	GAANNNNTTC	2 cut(s)	1094, 1291
PfeI	GAWTC	7 cut(s)	254, 404, 629, 647, 683, 773, 1576
PflMI	CCANNNNNTGG	1 cut(s)	85
PinAI	ACCGGT	3 cut(s)	664, 760, 790
PkrI	GCNGC	8 cut(s)	21, 24, 933, 946, 1472, 1475, 1606, 1609
PleI	GAGTC	1 cut(s)	1275
PpsI	GAGTC	1 cut(s)	1275
PshBI	ATTAAT	1 cut(s)	1227
PsiI	TTATAA	1 cut(s)	296
PspN4I	GGNNCC	6 cut(s)	348, 663, 789, 1010, 1111, 1428
PspPI	GGNCC	6 cut(s)	424, 1109, 1376, 1427, 1528, 1589
PstNI	CAGNNNCTG	5 cut(s)	440, 602, 731, 776, 1022
PsuI	RGATCY	3 cut(s)	803, 1259, 1328
RsaI	GTAC	6 cut(s)	74, 600, 780, 1131, 1194, 1340
RsaNI	GTAC	6 cut(s)	73, 599, 779, 1130, 1193, 1339
SaqAI	TTAA	4 cut(s)	852, 1065, 1227, 1599
SatI	GCNGC	8 cut(s)	20, 23, 932, 945, 1471, 1474, 1605, 1608
Sau3AI	GATC	5 cut(s)	472, 803, 1259, 1328, 1520
Sau96I	GGNCC	6 cut(s)	424, 1109, 1376, 1427, 1528, 1589
ScaI	AGTACT	1 cut(s)	74
SchI	GAGTC	1 cut(s)	1276
ScrFI	CCNGG	3 cut(s)	11, 1627, 1628
SduI	GDGCHC	3 cut(s)	471, 1038, 1204
SfaNI	GCATC	5 cut(s)	235, 703, 707, 1171, 1390
SgrAI	CRCCGGYG	2 cut(s)	760, 790
SinI	GGWCC	4 cut(s)	424, 1109, 1376, 1427
SmaI	CCCGGG	1 cut(s)	1628
SmlI	CTYRAG	1 cut(s)	249
SmoI	CTYRAG	1 cut(s)	249
SsiI	CCGC	3 cut(s)	14, 934, 1471
SspMI	CTAG	1 cut(s)	1205
StyD4I	CCNGG	3 cut(s)	9, 1625, 1626
StyI	CCWWGG	3 cut(s)	180, 427, 675
TaaI	ACNGT	8 cut(s)	172, 241, 491, 535, 733, 976, 1124, 1597
TaiI	ACGT	3 cut(s)	531, 754, 1441
TaqI	TCGA	3 cut(s)	612, 1270, 1570
TatI	WGTACW	4 cut(s)	72, 778, 1129, 1192
TauI	GCSGC	1 cut(s)	1473
TfiI	GAWTC	7 cut(s)	254, 404, 629, 647, 683, 773, 1576
Tru1I	TTAA	4 cut(s)	852, 1065, 1227, 1599
Tru9I	TTAA	4 cut(s)	852, 1065, 1227, 1599
TscAI	CASTG	2 cut(s)	229, 538
TseFI	GTSAC	3 cut(s)	283, 529, 640
TseI	GCWGC	7 cut(s)	19, 22, 931, 944, 1473, 1604, 1607
Tsp45I	GTSAC	3 cut(s)	283, 529, 640
TspDTI	ATGAA	6 cut(s)	179, 630, 875, 1107, 1338, 1362
TspGWI	ACGGA	1 cut(s)	437
TspMI	CCCGGG	1 cut(s)	1626
TspRI	CASTG	2 cut(s)	229, 538
Van91I	CCANNNNNTGG	1 cut(s)	85
VneI	GTGCAC	1 cut(s)	1200
VpaK11BI	GGWCC	4 cut(s)	424, 1109, 1376, 1427
VspI	ATTAAT	1 cut(s)	1227
XapI	RAATTY	7 cut(s)	323, 591, 1094, 1103, 1172, 1478, 1490
XceI	RCATGY	2 cut(s)	107, 899
XmaI	CCCGGG	1 cut(s)	1626
XmnI	GAANNNNTTC	2 cut(s)	1094, 1291
XspI	CTAG	1 cut(s)	1205
ZraI	GACGTC	1 cut(s)	529
ZrmI	AGTACT	1 cut(s)	74

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.