MD15G1129300.v1.1

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0008683
Physical Location & Seq
Reverse (-)
9363882 .. 9369188
5307 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1129300.v1.1.491

Sequence Viewer

Length: 2451 bp
ATGAACGTTGCGTTTCGTTTAAAGCAATTATTACACCCCGTGGAATTAAAGTTGACCTTGCCAGTTTGGAACGTGGACTTTGATTCGGGAAACCCTAGGGAGATAGAAATTCCCTTTGCAGGAGGAAATGATGCGTCGTTCCATTTGCATTTTCTTCTGCAGCCACCGATATCCACTCTCTGTTTCTCTCCCAACAATTCCAGACCCCGGTCATTAAAATTCAATCAAATTCTGATTTGGGTTTTTCTTTCTATCTGGATTAGCATCCACCAATTGCTGGAATATCAAATGGGAAAGCCAATTGGGAAGAAGAAAGATCATGAGGTTCAAAAGCCAGGGAATGCTGGCAGTAAGCACAGCAAGTCCTCGGATCGAAACTCGAAAGCCTTTGATGAAGACACTGCAATCTTCATCAACATGTCCTATGAACTCAAAGAAGAAGGTAACAAGCTCTATCAGAAGCACGATCATGAAGGTGCGATGTTGAAGTATGAAAAGGCCCTCAAACTCCTTCCACAGAATCATTTTGAAGTTGCTCATCTGCATAGCAGCATGGCGGCATGCTATATACAAATGGGTATTGGGGAATATCCTCGAGCTATCAACGAATGTAATTTAGCGTTAGAGGTATCGCCAAAGTACAGTAAAGCGCTGTTAAAAAGAGCATATTGTTATGAGGCTTTGAATAGGTTGGATTTGGCATTGAGAGATGTTAATGCTGTGCTGAGTATGGAACCGAATAATCTAAGTGCGTTGGAGATTTTGGCGAGCGTGAAGAGGGTGATGAATGAAAAGGGTATTGTTTATGATGAGAAAGAGATTGGTATTGCTAATGTACAGAAGCCTGCTGCTGCTCGTTTTCATAAGGTGGTGAAAGAGAAGTTAAAGAAGAAGAAGGGTAAGAAAGTTGAGCAGAAGATGGAGGATAAGGTCGTTGTGGAAGAGAAGGTGAGTGCTGATAAGGATAAAGAAGTGGTTACAAAGACTGTTGAGGAAGATAAAGTGGTTACGAAGCACGCTGAGGAAGAGAAACTGGTTACAAAACATGTGGAGGAAGAAAAAGTAGTTGCAAGGCCAGTGAAGCTGGTGTTTGGAGAGGATATAAGGTGGGCACAACTGCCAGCGAATTGTAGCATGGGGTTGGCGAGGGAGATAGTTAAGGATCGATTTCCTGGCTTGAAGGGTGTTCTTGTTAAGTATAGAGATCAAGAGGGTGATTTGGTTACAATCACTACCACAGATGAGTTGAGGATAGTTGAATCTTCCTGTGATATGCGGGGCTCACTTAGATTATTCATATCAGAAGTCAGTCCTGATCAAGAACCAATTTACGAGGGATTGAGTGATGGGGAGGTGAGTATGGAAGACAAAAAACCAAGTAATGTTGTAGAGAATGGGGATACTGAAAACGATAGAATAGTGGAAAAAAGGTCTACTTCTGTTGAGGACTGGGTTATCCAGTTTGCACGATTGTTCAAGAACCATGTTGGGTTCGATTCTGATTCGTATTTGGATCTTCATGAGCTTGGTGTGAAGCTATACTCCGAGGCAATGGAGGACACTGTAACACTTGAGGATGCTCAAGAACTTTTTGACATTGCTGCAGATAAGTTCCAAGAAATGGCGGCTTTGGCATTGTTTAATTGGGGAAATGTCCACATGTCTAGGGCAAGGAAGCGAGTTTCCTTTCCTGAAAATGCTTCAAGGGAAACCATTACTGAACTGATCAAGGCTGGCTATGACTGGGCAAAGAAAGAGTATAAGAAGGCAGAGGGTAGGTATGAAGAGGCTGTGAAAATAAAACCCGACTTTTATGAAGGTTATCTTGCTCTGGGGCAACAACAGTTTGACCAAGCAAAGCTTTGTTGGTACTATGCTATTGGAAGCAAGAATGAGCTAGAAACAGAGCCTTCTTCAGAGGTGCTTAAGCTTTATAACAAGGCTGAGGACAGCATGGACAGGGGCATGCTGATGTGGGAGGAGATGGAAGAGCGGCGTCTAAATGGACTGTCCAAAGAAGAAAAATATAACACCCAACTGCAGAAATTGGGTTTGGATGGCCTAATTCAAGAGGTATCTGCTGATGAAGCTGCAGAGCATGCGGCAAATATGAAGTCACAGATATACCTCTTGTGGGGAACCTTGCTGTATGAGCGTTCTGTTGTGGAATATAAGCTAGGGCTACCTACTTGGGAGGAATGTTTAGAAGTTTCTGTTGAAAAGTTTGAACTTTGTGGAGCTTCTCCAACAGATATTGCCGTGATGATAAAGAACCACTGTTCCAATGAAACTGCACTGGAAGGTTTAGGGTTCAAAATTGATGAGATAATTCAGGCATGGAATGAAATGTATGATGCTAAAAGGTGGCAATTTGGCGTTCCCTCTTTCCGGCTTGAGCCATTGTTGCGTCGGCAAGTTCCAAAACTTCATTCTATCTTGGAGCATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0008150 GO:0032886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0065007
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

817

Amino Acids

93.32

Weight (kDa)

5.56

Isoelectric Point (pI)

37.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 359 - 435 5.5e-12 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1935
AccB7I CCANNNNNTGG 2 cut(s) 277, 1621
AccBSI CCGCTC 1 cut(s) 1993
AccI GTMKAC 1 cut(s) 1433
AciI CCGC 5 cut(s) 557, 1276, 1625, 1993, 2102
AclI AACGTT 1 cut(s) 6
AclWI GGATC 3 cut(s) 378, 1170, 1521
AcsI RAATTY 3 cut(s) 108, 218, 228
AcuI CTGAAG 1 cut(s) 1899
AcyI GRCGYC 1 cut(s) 1996
AdeI CACNNNGTG 1 cut(s) 40
AfaI GTAC 3 cut(s) 641, 837, 1871
AfeI AGCGCT 1 cut(s) 651
AfiI CCNNNNNNNGG 6 cut(s) 119, 207, 277, 1621, 2134, 2388
AflII CTTAAG 1 cut(s) 1925
AflIII ACRYGT 3 cut(s) 417, 1045, 1659
AjnI CCWGG 2 cut(s) 334, 1171
AjuI GAANNNNNNNTTGG 4 cut(s) 2036, 2068, 2413, 2445
AloI GAACNNNNNNTCC 2 cut(s) 2264, 2296
AlwI GGATC 3 cut(s) 378, 1170, 1521
Ama87I CYCGRG 1 cut(s) 594
Aor51HI AGCGCT 1 cut(s) 651
AoxI GGCC 3 cut(s) 498, 1073, 2059
ApeKI GCWGC 6 cut(s) 160, 549, 848, 851, 1601, 2090
ApoI RAATTY 3 cut(s) 108, 218, 228
ArsI GACNNNNNNTTYG 2 cut(s) 2099, 2131
AspA2I CCTAGG 1 cut(s) 95
AspLEI GCGC 1 cut(s) 652
AspS9I GGNCC 1 cut(s) 499
AsuC2I CCSGG 1 cut(s) 208
AsuHPI GGTGA 5 cut(s) 793, 883, 961, 1226, 1366
AvaI CYCGRG 1 cut(s) 594
AvrII CCTAGG 1 cut(s) 95
BaeGI GKGCMC 1 cut(s) 1114
BanII GRGCYC 1 cut(s) 1283
BbsI GAAGAC 2 cut(s) 402, 1371
BbvCI CCTCAGC 2 cut(s) 1020, 1944
BbvI GCAGC 6 cut(s) 172, 561, 835, 838, 1588, 2077
BccI CCATC 4 cut(s) 913, 1340, 1978, 2051
BceAI ACGGC 1 cut(s) 2243
BciT130I CCWGG 2 cut(s) 336, 1173
BciVI GTATCC 1 cut(s) 1393
BclI TGATCA 2 cut(s) 1315, 1725
BcnI CCSGG 1 cut(s) 208
BfaI CTAG 4 cut(s) 96, 1665, 1898, 2177
BfmI CTRYAG 4 cut(s) 158, 1602, 2039, 2091
BfoI RGCGCY 1 cut(s) 653
BfrI CTTAAG 1 cut(s) 1925
BfuI GTATCC 1 cut(s) 1393
BlnI CCTAGG 1 cut(s) 95
Bme1390I CCNGG 3 cut(s) 208, 336, 1173
BmeT110I CYCGRG 1 cut(s) 594
BmgT120I GGNCC 1 cut(s) 499
BmiI GGNNCC 2 cut(s) 735, 2140
BmrFI CCNGG 3 cut(s) 208, 336, 1173
BmrI ACTGGG 2 cut(s) 1459, 1753
BmsI GCATC 4 cut(s) 121, 273, 1567, 2344
BmuI ACTGGG 2 cut(s) 1459, 1753
BoxI GACNNNNGTC 1 cut(s) 208
BpiI GAAGAC 2 cut(s) 402, 1371
Bpu10I CCTNAGC 2 cut(s) 1020, 1944
BpuEI CTTGAG 3 cut(s) 1566, 1592, 2414
BpuMI CCSGG 1 cut(s) 208
Bsa29I ATCGAT 1 cut(s) 1165
BsaBI GATNNNNATC 1 cut(s) 263
BsaHI GRCGYC 1 cut(s) 1996
BsaJI CCNNGG 6 cut(s) 39, 95, 206, 335, 366, 1545
Bsc4I CCNNNNNNNGG 6 cut(s) 119, 207, 277, 1621, 2134, 2388
Bse1I ACTGG 7 cut(s) 62, 1038, 1076, 1454, 1459, 1748, 2301
Bse3DI GCAATG 2 cut(s) 1557, 1596
Bse8I GATNNNNATC 1 cut(s) 263
BseBI CCWGG 2 cut(s) 336, 1173
BseCI ATCGAT 1 cut(s) 1165
BseDI CCNNGG 6 cut(s) 39, 95, 206, 335, 366, 1545
BseGI GGATG 3 cut(s) 264, 1582, 2062
BseJI GATNNNNATC 1 cut(s) 263
BseLI CCNNNNNNNGG 6 cut(s) 119, 207, 277, 1621, 2134, 2388
BseMI GCAATG 2 cut(s) 1557, 1596
BseMII CTCAG 3 cut(s) 716, 1011, 1935
BseNI ACTGG 7 cut(s) 62, 1038, 1076, 1454, 1459, 1748, 2301
BseRI GAGGAG 1 cut(s) 1994
BseSI GKGCMC 1 cut(s) 1114
BseXI GCAGC 6 cut(s) 172, 561, 835, 838, 1588, 2077
BsgI GTGCAG 1 cut(s) 2277
BshFI GGCC 3 cut(s) 500, 1075, 2061
BshVI ATCGAT 1 cut(s) 1165
BsiHKCI CYCGRG 1 cut(s) 594
BsiSI CCGG 2 cut(s) 208, 2389
BslI CCNNNNNNNGG 6 cut(s) 119, 207, 277, 1621, 2134, 2388
BsmI GAATGC 1 cut(s) 346
BsnI GGCC 3 cut(s) 500, 1075, 2061
BsoBI CYCGRG 1 cut(s) 594
Bsp1286I GDGCHC 2 cut(s) 1114, 1283
Bsp1407I TGTACA 1 cut(s) 835
Bsp143I GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
BspACI CCGC 5 cut(s) 557, 1276, 1625, 1993, 2102
BspANI GGCC 3 cut(s) 500, 1075, 2061
BspCNI CTCAG 3 cut(s) 717, 1012, 1936
BspDI ATCGAT 1 cut(s) 1165
BspHI TCATGA 3 cut(s) 319, 469, 1519
BspLI GGNNCC 2 cut(s) 735, 2140
BspMAI CTGCAG 4 cut(s) 162, 1606, 2043, 2095
BspPI GGATC 3 cut(s) 378, 1170, 1521
BspQI GCTCTTC 1 cut(s) 1983
BspTI CTTAAG 1 cut(s) 1925
BsrBI CCGCTC 1 cut(s) 1993
BsrDI GCAATG 2 cut(s) 1557, 1596
BsrGI TGTACA 1 cut(s) 835
BsrI ACTGG 7 cut(s) 62, 1038, 1076, 1454, 1459, 1748, 2301
BssECI CCNNGG 6 cut(s) 39, 95, 206, 335, 366, 1545
BssMI GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
BssNI GRCGYC 1 cut(s) 1996
BssT1I CCWWGG 1 cut(s) 95
Bst2UI CCWGG 2 cut(s) 336, 1173
Bst4CI ACNGT 6 cut(s) 644, 988, 1564, 1845, 2010, 2279
Bst6I CTCTTC 5 cut(s) 770, 936, 1020, 1779, 1983
BstACI GRCGYC 1 cut(s) 1996
BstAFI CTTAAG 1 cut(s) 1925
BstAPI GCANNNNNTGC 1 cut(s) 2099
BstAUI TGTACA 1 cut(s) 835
BstDEI CTNAG 5 cut(s) 725, 746, 1020, 1286, 1944
BstDSI CCRYGG 1 cut(s) 39
BstF5I GGATG 3 cut(s) 264, 1582, 2062
BstH2I RGCGCY 1 cut(s) 653
BstHHI GCGC 1 cut(s) 652
BstKTI GATC 8 cut(s) 319, 373, 469, 1165, 1207, 1318, 1516, 1728
BstMBI GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
BstMWI GCNNNNNNNGC 6 cut(s) 1081, 1631, 2087, 2099, 2152, 2404
BstNI CCWGG 2 cut(s) 336, 1173
BstNSI RCATGY 7 cut(s) 421, 564, 1049, 1663, 1969, 2102, 2447
BstPAI GACNNNNGTC 1 cut(s) 208
BstSCI CCNGG 3 cut(s) 206, 334, 1171
BstSFI CTRYAG 4 cut(s) 158, 1602, 2039, 2091
BstSLI GKGCMC 1 cut(s) 1114
BstV1I GCAGC 6 cut(s) 172, 561, 835, 838, 1588, 2077
BstV2I GAAGAC 2 cut(s) 402, 1371
BstX2I RGATCY 1 cut(s) 1513
BstYI RGATCY 1 cut(s) 1513
Bsu15I ATCGAT 1 cut(s) 1165
BsuI GTATCC 1 cut(s) 1393
BsuRI GGCC 3 cut(s) 500, 1075, 2061
BsuTUI ATCGAT 1 cut(s) 1165
BtgI CCRYGG 1 cut(s) 39
BtgZI GCGATG 1 cut(s) 494
BtsCI GGATG 3 cut(s) 264, 1582, 2062
BtsI GCAGTG 1 cut(s) 399
BtsIMutI CAGTG 5 cut(s) 399, 1083, 1560, 2275, 2294
CciI TCATGA 3 cut(s) 319, 469, 1519
CfoI GCGC 1 cut(s) 652
Cfr13I GGNCC 1 cut(s) 499
ClaI ATCGAT 1 cut(s) 1165
CseI GACGC 3 cut(s) 123, 1985, 2396
Csp6I GTAC 3 cut(s) 640, 836, 1870
CspCI CAANNNNNGTGG 2 cut(s) 1029, 1064
CviQI GTAC 3 cut(s) 640, 836, 1870
DdeI CTNAG 5 cut(s) 725, 746, 1020, 1286, 1944
DpnI GATC 8 cut(s) 318, 372, 468, 1164, 1206, 1317, 1515, 1727
DpnII GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
DraI TTTAAA 1 cut(s) 21
DraIII CACNNNGTG 1 cut(s) 40
Eam1104I CTCTTC 5 cut(s) 770, 936, 1020, 1779, 1983
EarI CTCTTC 5 cut(s) 770, 936, 1020, 1779, 1983
Eco130I CCWWGG 1 cut(s) 95
Eco24I GRGCYC 1 cut(s) 1283
Eco32I GATATC 1 cut(s) 171
Eco47III AGCGCT 1 cut(s) 651
Eco57I CTGAAG 1 cut(s) 1899
Eco88I CYCGRG 1 cut(s) 594
EcoO109I RGGNCCY 1 cut(s) 499
EcoRII CCWGG 2 cut(s) 334, 1171
EcoRV GATATC 1 cut(s) 171
EcoT14I CCWWGG 1 cut(s) 95
EcoT38I GRGCYC 1 cut(s) 1283
ErhI CCWWGG 1 cut(s) 95
FalI AAGNNNNNCTT 8 cut(s) 41, 73, 1420, 1452, 1809, 1841, 1845, 1877
FauI CCCGC 1 cut(s) 1269
FbaI TGATCA 2 cut(s) 1315, 1725
FblI GTMKAC 1 cut(s) 1433
FokI GGATG 3 cut(s) 251, 1589, 2069
FriOI GRGCYC 1 cut(s) 1283
FspBI CTAG 4 cut(s) 96, 1665, 1898, 2177
GlaI GCGC 1 cut(s) 651
HaeII RGCGCY 1 cut(s) 653
HaeIII GGCC 3 cut(s) 500, 1075, 2061
HapII CCGG 2 cut(s) 208, 2389
HgaI GACGC 3 cut(s) 123, 1985, 2396
HhaI GCGC 1 cut(s) 652
Hin1I GRCGYC 1 cut(s) 1996
Hin6I GCGC 1 cut(s) 650
HinP1I GCGC 1 cut(s) 650
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HindIII AAGCTT 2 cut(s) 1859, 1928
HinfI GANTC 5 cut(s) 83, 520, 1259, 1496, 1502
HpaII CCGG 2 cut(s) 208, 2389
HphI GGTGA 5 cut(s) 793, 883, 961, 1226, 1366
Hpy166II GTNNAC 4 cut(s) 54, 76, 1434, 1657
Hpy188I TCNGA 7 cut(s) 234, 370, 459, 1303, 1501, 1546, 1918
Hpy8I GTNNAC 4 cut(s) 54, 76, 1434, 1657
Hpy99I CGWCG 2 cut(s) 139, 2412
HpyCH4III ACNGT 6 cut(s) 644, 988, 1564, 1845, 2010, 2279
HpyCH4IV ACGT 2 cut(s) 6, 72
HpyF10VI GCNNNNNNNGC 6 cut(s) 1081, 1631, 2087, 2099, 2152, 2404
HpyF3I CTNAG 5 cut(s) 725, 746, 1020, 1286, 1944
HpySE526I ACGT 2 cut(s) 6, 72
Hsp92I GRCGYC 1 cut(s) 1996
HspAI GCGC 1 cut(s) 650
Ksp22I TGATCA 2 cut(s) 1315, 1725
Kzo9I GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
LguI GCTCTTC 1 cut(s) 1983
LmnI GCTCC 2 cut(s) 2237, 2440
Lsp1109I GCAGC 6 cut(s) 172, 561, 835, 838, 1588, 2077
LweI GCATC 4 cut(s) 121, 273, 1567, 2344
MaeI CTAG 4 cut(s) 96, 1665, 1898, 2177
MaeII ACGT 2 cut(s) 6, 72
MaeIII GTNAC 7 cut(s) 443, 976, 1006, 1036, 1222, 1564, 2115
MalI GATC 8 cut(s) 318, 372, 468, 1164, 1206, 1317, 1515, 1727
MbiI CCGCTC 1 cut(s) 1993
MboI GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
MfeI CAATTG 2 cut(s) 272, 300
MflI RGATCY 1 cut(s) 1513
MhlI GDGCHC 2 cut(s) 1114, 1283
MmeI TCCRAC 3 cut(s) 672, 735, 2270
MslI CAYNNNNRTG 4 cut(s) 416, 468, 474, 1970
MspCI CTTAAG 1 cut(s) 1925
MspI CCGG 2 cut(s) 208, 2389
MspR9I CCNGG 3 cut(s) 208, 336, 1173
MunI CAATTG 2 cut(s) 272, 300
Mva1269I GAATGC 1 cut(s) 346
MvaI CCWGG 2 cut(s) 336, 1173
MwoI GCNNNNNNNGC 6 cut(s) 1081, 1631, 2087, 2099, 2152, 2404
NciI CCSGG 1 cut(s) 208
NdeII GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
NlaIV GGNNCC 2 cut(s) 735, 2140
NmuCI GTSAC 1 cut(s) 2115
NspI RCATGY 7 cut(s) 421, 564, 1049, 1663, 1969, 2102, 2447
PaeI GCATGC 4 cut(s) 564, 1969, 2102, 2447
PaeR7I CTCGAG 1 cut(s) 594
PagI TCATGA 3 cut(s) 319, 469, 1519
PciI ACATGT 3 cut(s) 417, 1045, 1659
PciSI GCTCTTC 1 cut(s) 1983
PctI GAATGC 1 cut(s) 346
PfeI GAWTC 5 cut(s) 83, 520, 1259, 1496, 1502
PflMI CCANNNNNTGG 2 cut(s) 277, 1621
PscI ACATGT 3 cut(s) 417, 1045, 1659
PshAI GACNNNNGTC 1 cut(s) 208
PsiI TTATAA 1 cut(s) 1935
Psp1406I AACGTT 1 cut(s) 6
Psp6I CCWGG 2 cut(s) 334, 1171
PspGI CCWGG 2 cut(s) 334, 1171
PspN4I GGNNCC 2 cut(s) 735, 2140
PspPI GGNCC 1 cut(s) 499
PspXI VCTCGAGB 1 cut(s) 594
PstI CTGCAG 4 cut(s) 162, 1606, 2043, 2095
PsuI RGATCY 1 cut(s) 1513
RsaI GTAC 3 cut(s) 641, 837, 1871
RsaNI GTAC 3 cut(s) 640, 836, 1870
RseI CAYNNNNRTG 4 cut(s) 416, 468, 474, 1970
SapI GCTCTTC 1 cut(s) 1983
Sau3AI GATC 8 cut(s) 316, 370, 466, 1162, 1204, 1315, 1513, 1725
Sau96I GGNCC 1 cut(s) 499
ScrFI CCNGG 3 cut(s) 208, 336, 1173
SduI GDGCHC 2 cut(s) 1114, 1283
SfaNI GCATC 4 cut(s) 121, 273, 1567, 2344
SfcI CTRYAG 4 cut(s) 158, 1602, 2039, 2091
Sfr274I CTCGAG 1 cut(s) 594
SlaI CTCGAG 1 cut(s) 594
SmiMI CAYNNNNRTG 4 cut(s) 416, 468, 474, 1970
SmlI CTYRAG 5 cut(s) 594, 1571, 1581, 1925, 2393
SmoI CTYRAG 5 cut(s) 594, 1571, 1581, 1925, 2393
SphI GCATGC 4 cut(s) 564, 1969, 2102, 2447
SsiI CCGC 5 cut(s) 557, 1276, 1625, 1993, 2102
SspMI CTAG 4 cut(s) 96, 1665, 1898, 2177
StyD4I CCNGG 3 cut(s) 206, 334, 1171
StyI CCWWGG 1 cut(s) 95
TaaI ACNGT 6 cut(s) 644, 988, 1564, 1845, 2010, 2279
TaiI ACGT 2 cut(s) 9, 75
TaqI TCGA 5 cut(s) 373, 380, 595, 1165, 1494
TatI WGTACW 2 cut(s) 639, 835
TauI GCSGC 4 cut(s) 560, 1628, 1996, 2105
TfiI GAWTC 5 cut(s) 83, 520, 1259, 1496, 1502
TscAI CASTG 5 cut(s) 406, 1083, 1567, 2282, 2301
TseFI GTSAC 1 cut(s) 2115
TseI GCWGC 6 cut(s) 160, 549, 848, 851, 1601, 2090
Tsp45I GTSAC 1 cut(s) 2115
TspRI CASTG 5 cut(s) 406, 1083, 1567, 2282, 2301
Van91I CCANNNNNTGG 2 cut(s) 277, 1621
Vha464I CTTAAG 1 cut(s) 1925
XapI RAATTY 3 cut(s) 108, 218, 228
XceI RCATGY 7 cut(s) 421, 564, 1049, 1663, 1969, 2102, 2447
XhoI CTCGAG 1 cut(s) 594
XmaJI CCTAGG 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 1433
XspI CTAG 4 cut(s) 96, 1665, 1898, 2177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.