RchiOBHm_Chr6g0297371

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0008683
Physical Location & Seq
Forward (+)
59059000 .. 59062728
3729 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26689

Sequence Viewer

Length: 2181 bp
ATGGGAAAGCCAACTGGGAAGAAGAAGGACCATGATGTGCAGAAGCCTGGGAATGCTGCGAGTAAGCAGAGCAAAGCTGCGGATCGAAACTCGAAAGCCTTGGATGAAGACACTGCAATCTTCATCAACATGTCCCAAGAGCTCAGAGAAGAAGGTAACAAGCTCTTCCAGAAGCGTGACAGTGAAGGCGCAATGTTGAAGTATGAGAAAGCGCTCAAACTACTGCCCAAGAACCATATTGATGTTGCTCATTTACATAGTAACATGGCTGCTTGTTATATGCAAATGGGTCTCGGTGAGTATCCTCGGGCAATCAACGAATGCAATTTGGCATTAGAGGTGTCACCGAGGTACAGTAAAGCGCTGCTGAGAAGGTCGAGGTGTTATGAGGCTTTGAATAGGTTGGATTTGGCATTGAGGGATGTTAATACCGTTTTGAGTATGGAGCCGAACAATCTAAATGCATTGGAGATTTTGGAGAGCGTGAAGACGGTGATGAGCGAAAAGGGGATTGTTTTTGATGAGAAAGAAATTGGTATTGCTAATGTACAGCAGATCCCTGCTGCTCGTTTTCGTAAAGTGGTGAAAGAGAAGCTAAAGAAGAAGAAGGGTAAGAGGGTTGAGGAGAAGACAGAGGACAAGGCTGTTGTGGAAGAAAATGTGAGAGTTATTAAGGACAAACAATTGGTAACAAAGACTGTTGAGGAAGACAAAGCAGTCGTAAAGCATGTTGAGGAAGAGAAACAAGTCATGAATCATGTGGAAGAGAAGCATATTAAGGAGGAAACCATAGTTACAAAGACAGTCAAGTTGGTGTTTGGAGAGGATATAAGATGGGCACAGTTACCACTGAGTTGTAGCATGAGGCTGGTCAGGGAGATAGTTAGGGATCGATTTCCTGGCTTGAAGGGTGTTCTGGTGAAGTATAGAGATCAAGAGGGTGATTTGGTTACAATCACTACTACGGATGAGTTGAGGTTGGCTGAGTCATCATGTGATATGAGGGGATCACTTAGATTTTTTATAACAGAAGTCGGTGCTGATCAAGAACCAATTTATGAGGGATCAAGTGAAGAGGAAGTGCGTAAGGAAGATCCAAAGCCAAGTAATGTTGTTGAGAATGGGGACAGTGGGAATCATACCGAAGTAGGAAAGGGGTCTACGACTTGTGTTGAGGACTGGATTATCCAGTTTGCAAGATTGTTCAAGAACCATGTTGGGTTCGATTCTGATTCATACTTGGATCTTCACGAACTTGGGGTGAAGCTATACTCGGAGGCAATGGAGGACACTGTAACACTTGATGATGCTCAAGAACTTTTTGACATTGCTGCAATTAAATTCCAAGAGATGGCGGCTTTGGCATTGTTCAATTGGGGAAATGTCCACATGTCTAAGGCAAGGAAGCGGGCATCCTTGCCAGAAGATGCTTCAAGGGAAACCGTTATTGAACAGATTAAGGCTGTATATGAATGGGCACAGAAAGAGTATAAGAAGGCAGAGAGTAGGTATGAAGAAGCTGTGAAAATAAAGCCAGACTTCTACGAAGGTTATCTTGCACTCGGCCAACAACAGTTTGAACAAGCAAAGCTTTCTTGGTACTATGCGATTGGAAGCAAGATTGAGTTGCAAACTGAGCCTTCTTCAGAGGTGCTTCAGCTTTATAACAAGGCTGAGGACAGCATGGACAAGGGAATGCTATTGTGGGAGGAGATGGAAGAGCGGCGTCTAAATGGACTCTCCAAAGAAGATAAGTATAAAGCCCAATTGCAGAAAATGGGATTGGATGGCCTATTTGAGGAGGTGTCTGCTGATGAAGCTGCAGAACAAGCTGCAAATATGAAGTCACAAATATACCTCCTGTGGGGAACCTTGCTGTATGAGCGTTCTGTTGTAGAATATAAGCTAGAGCTACCAACTTGGGAGGAATGTTTAGAAGTTGCCATTGAGAAGTTTGAACTTTGTGGAGCGTCTCCAACAGATATAGCTGTGATGATAAAGAATCATTGTTCCAATGAAACTGCAGTGGAAGGTATGGGGTTCAAAATTGATGAGATAATACAGGCGTGGAATGAAATGTATGATGCTAAGAGGTGGCAGTTTGGTGTTCCCTCTTTCCGGCTTGAACCACTGTTGCGTCGGCGCGTCCCAAAACTTCATTCTATCTTGGAGCATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0008150 GO:0032886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0065007
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

726

Amino Acids

83.04

Weight (kDa)

5.39

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 267 - 343 3.8e-13 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1025, 1665
AasI GACNNNNNNGTC 1 cut(s) 716
AccB7I CCANNNNNTGG 1 cut(s) 1351
AccBSI CCGCTC 1 cut(s) 1723
AccI GTMKAC 1 cut(s) 1160
AccII CGCG 1 cut(s) 2145
AciI CCGC 4 cut(s) 80, 1355, 1408, 1723
AclWI GGATC 7 cut(s) 90, 550, 897, 1015, 1072, 1088, 1251
AcoI YGGCCR 1 cut(s) 1564
AcsI RAATTY 1 cut(s) 1340
AcuI CTGAAG 2 cut(s) 1629, 1640
AcyI GRCGYC 1 cut(s) 1726
AfaI GTAC 3 cut(s) 353, 549, 1601
AfeI AGCGCT 2 cut(s) 213, 363
AfiI CCNNNNNNNGG 4 cut(s) 1351, 1798, 1864, 2118
AflIII ACRYGT 2 cut(s) 129, 1389
AjnI CCWGG 2 cut(s) 46, 898
AjuI GAANNNNNNNTTGG 4 cut(s) 1766, 1798, 2143, 2175
Alw21I GWGCWC 1 cut(s) 144
Alw26I GTCTC 2 cut(s) 296, 1977
AlwI GGATC 7 cut(s) 90, 550, 897, 1015, 1072, 1088, 1251
Ama87I CYCGRG 1 cut(s) 306
Aor51HI AGCGCT 2 cut(s) 213, 363
AoxI GGCC 2 cut(s) 1564, 1789
ApeKI GCWGC 8 cut(s) 56, 77, 269, 364, 563, 1331, 1820, 1832
ApoI RAATTY 1 cut(s) 1340
ArsI GACNNNNNNTTYG 2 cut(s) 1829, 1861
AspLEI GCGC 4 cut(s) 191, 214, 364, 2145
AspS9I GGNCC 1 cut(s) 28
AsuHPI GGTGA 7 cut(s) 308, 336, 505, 595, 931, 953, 1273
AvaI CYCGRG 1 cut(s) 306
AvaII GGWCC 1 cut(s) 28
BaeGI GKGCMC 2 cut(s) 841, 1480
BanII GRGCYC 1 cut(s) 144
BbsI GAAGAC 4 cut(s) 114, 494, 635, 714
Bbv12I GWGCWC 1 cut(s) 144
BbvCI CCTCAGC 1 cut(s) 1674
BbvI GCAGC 8 cut(s) 43, 64, 256, 351, 550, 1318, 1807, 1819
BccI CCATC 4 cut(s) 828, 1345, 1708, 1781
BciT130I CCWGG 2 cut(s) 48, 900
BciVI GTATCC 1 cut(s) 312
BclI TGATCA 1 cut(s) 1042
BcoDI GTCTC 2 cut(s) 296, 1977
BfaI CTAG 1 cut(s) 1907
BfmI CTRYAG 2 cut(s) 1821, 2022
BfoI RGCGCY 2 cut(s) 215, 365
BfuI GTATCC 1 cut(s) 312
Bme1390I CCNGG 2 cut(s) 48, 900
Bme18I GGWCC 1 cut(s) 28
BmeT110I CYCGRG 1 cut(s) 306
BmgT120I GGNCC 1 cut(s) 28
BmiI GGNNCC 2 cut(s) 447, 1870
BmrFI CCNGG 2 cut(s) 48, 900
BmrI ACTGGG 1 cut(s) 24
BmsI GCATC 4 cut(s) 1297, 1417, 1421, 2074
BmuI ACTGGG 1 cut(s) 24
BpiI GAAGAC 4 cut(s) 114, 494, 635, 714
Bpu10I CCTNAGC 1 cut(s) 1674
BpuEI CTTGAG 1 cut(s) 1296
Bsa29I ATCGAT 1 cut(s) 892
BsaHI GRCGYC 1 cut(s) 1726
BsaI GGTCTC 1 cut(s) 296
BsaJI CCNNGG 4 cut(s) 47, 99, 305, 347
Bsc4I CCNNNNNNNGG 4 cut(s) 1351, 1798, 1864, 2118
Bse1I ACTGG 3 cut(s) 19, 1184, 1189
Bse3DI GCAATG 3 cut(s) 198, 1287, 1326
BseBI CCWGG 2 cut(s) 48, 900
BseCI ATCGAT 1 cut(s) 892
BseDI CCNNGG 4 cut(s) 47, 99, 305, 347
BseGI GGATG 5 cut(s) 109, 427, 973, 1412, 1792
BseLI CCNNNNNNNGG 4 cut(s) 1351, 1798, 1864, 2118
BseMI GCAATG 3 cut(s) 198, 1287, 1326
BseMII CTCAG 6 cut(s) 157, 359, 842, 975, 1626, 1665
BseNI ACTGG 3 cut(s) 19, 1184, 1189
BseRI GAGGAG 3 cut(s) 638, 1724, 1814
BseSI GKGCMC 2 cut(s) 841, 1480
BseXI GCAGC 8 cut(s) 43, 64, 256, 351, 550, 1318, 1807, 1819
BsgI GTGCAG 1 cut(s) 59
Bsh1236I CGCG 1 cut(s) 2145
BshFI GGCC 2 cut(s) 1566, 1791
BshVI ATCGAT 1 cut(s) 892
BsiHKAI GWGCWC 1 cut(s) 144
BsiHKCI CYCGRG 1 cut(s) 306
BsiSI CCGG 1 cut(s) 2119
BslFI GGGAC 3 cut(s) 118, 1139, 2132
BslI CCNNNNNNNGG 4 cut(s) 1351, 1798, 1864, 2118
BsmAI GTCTC 2 cut(s) 296, 1977
BsmBI CGTCTC 1 cut(s) 1977
BsmFI GGGAC 3 cut(s) 118, 1139, 2132
BsmI GAATGC 3 cut(s) 58, 326, 1701
BsnI GGCC 2 cut(s) 1566, 1791
Bso31I GGTCTC 1 cut(s) 296
BsoBI CYCGRG 1 cut(s) 306
Bsp1286I GDGCHC 3 cut(s) 144, 841, 1480
Bsp1407I TGTACA 1 cut(s) 547
Bsp143I GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
BspACI CCGC 4 cut(s) 80, 1355, 1408, 1723
BspANI GGCC 2 cut(s) 1566, 1791
BspCNI CTCAG 6 cut(s) 156, 360, 843, 976, 1627, 1666
BspDI ATCGAT 1 cut(s) 892
BspFNI CGCG 1 cut(s) 2145
BspHI TCATGA 1 cut(s) 750
BspLI GGNNCC 2 cut(s) 447, 1870
BspMAI CTGCAG 2 cut(s) 1825, 2026
BspPI GGATC 7 cut(s) 90, 550, 897, 1015, 1072, 1088, 1251
BspQI GCTCTTC 2 cut(s) 170, 1713
BspTNI GGTCTC 1 cut(s) 296
BsrBI CCGCTC 1 cut(s) 1723
BsrDI GCAATG 3 cut(s) 198, 1287, 1326
BsrGI TGTACA 1 cut(s) 547
BsrI ACTGG 3 cut(s) 19, 1184, 1189
BssECI CCNNGG 4 cut(s) 47, 99, 305, 347
BssMI GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
BssNI GRCGYC 1 cut(s) 1726
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 2 cut(s) 48, 900
Bst6I CTCTTC 5 cut(s) 170, 732, 759, 1068, 1713
BstACI GRCGYC 1 cut(s) 1726
BstAUI TGTACA 1 cut(s) 547
BstC8I GCNNGC 2 cut(s) 1410, 2175
BstDEI CTNAG 9 cut(s) 143, 368, 851, 984, 1013, 1395, 1635, 1674, 2088
BstENI CCTNNNNNAGG 1 cut(s) 1796
BstF5I GGATG 5 cut(s) 109, 427, 973, 1412, 1792
BstFNI CGCG 1 cut(s) 2145
BstH2I RGCGCY 2 cut(s) 215, 365
BstHHI GCGC 4 cut(s) 191, 214, 364, 2145
BstKTI GATC 9 cut(s) 85, 558, 892, 934, 1010, 1045, 1067, 1096, 1246
BstMAI GTCTC 2 cut(s) 296, 1977
BstMBI GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
BstMWI GCNNNNNNNGC 5 cut(s) 1361, 1636, 1817, 1829, 1882
BstNI CCWGG 2 cut(s) 48, 900
BstNSI RCATGY 4 cut(s) 133, 731, 1393, 2177
BstSCI CCNGG 2 cut(s) 46, 898
BstSFI CTRYAG 2 cut(s) 1821, 2022
BstSLI GKGCMC 2 cut(s) 841, 1480
BstUI CGCG 1 cut(s) 2145
BstV1I GCAGC 8 cut(s) 43, 64, 256, 351, 550, 1318, 1807, 1819
BstV2I GAAGAC 4 cut(s) 114, 494, 635, 714
BstX2I RGATCY 3 cut(s) 555, 1093, 1243
BstYI RGATCY 3 cut(s) 555, 1093, 1243
Bsu15I ATCGAT 1 cut(s) 892
BsuI GTATCC 1 cut(s) 312
BsuRI GGCC 2 cut(s) 1566, 1791
BsuTUI ATCGAT 1 cut(s) 892
BtsCI GGATG 5 cut(s) 109, 427, 973, 1412, 1792
BtsI GCAGTG 2 cut(s) 111, 2031
BtsIMutI CAGTG 7 cut(s) 111, 187, 848, 1135, 1290, 2031, 2129
Cac8I GCNNGC 2 cut(s) 1410, 2175
CciI TCATGA 1 cut(s) 750
CfoI GCGC 4 cut(s) 191, 214, 364, 2145
Cfr13I GGNCC 1 cut(s) 28
ClaI ATCGAT 1 cut(s) 892
CseI GACGC 4 cut(s) 1715, 1959, 2126, 2134
Csp6I GTAC 3 cut(s) 352, 548, 1600
CviQI GTAC 3 cut(s) 352, 548, 1600
DdeI CTNAG 9 cut(s) 143, 368, 851, 984, 1013, 1395, 1635, 1674, 2088
DpnI GATC 9 cut(s) 84, 557, 891, 933, 1009, 1044, 1066, 1095, 1245
DpnII GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
DrdI GACNNNNNNGTC 1 cut(s) 716
DseDI GACNNNNNNGTC 1 cut(s) 716
EaeI YGGCCR 1 cut(s) 1564
Eam1104I CTCTTC 5 cut(s) 170, 732, 759, 1068, 1713
EarI CTCTTC 5 cut(s) 170, 732, 759, 1068, 1713
Ecl136II GAGCTC 1 cut(s) 142
Eco130I CCWWGG 1 cut(s) 99
Eco24I GRGCYC 1 cut(s) 144
Eco31I GGTCTC 1 cut(s) 296
Eco47I GGWCC 1 cut(s) 28
Eco47III AGCGCT 2 cut(s) 213, 363
Eco53kI GAGCTC 1 cut(s) 142
Eco57I CTGAAG 2 cut(s) 1629, 1640
Eco88I CYCGRG 1 cut(s) 306
EcoICRI GAGCTC 1 cut(s) 142
EcoNI CCTNNNNNAGG 1 cut(s) 1796
EcoRII CCWGG 2 cut(s) 46, 898
EcoT14I CCWWGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 466
EcoT38I GRGCYC 1 cut(s) 144
ErhI CCWWGG 1 cut(s) 99
Esp3I CGTCTC 1 cut(s) 1977
FalI AAGNNNNNCTT 6 cut(s) 1523, 1555, 1539, 1571, 1575, 1607
FaqI GGGAC 3 cut(s) 118, 1139, 2132
FauI CCCGC 1 cut(s) 1401
FbaI TGATCA 1 cut(s) 1042
FblI GTMKAC 1 cut(s) 1160
FokI GGATG 5 cut(s) 116, 434, 980, 1399, 1799
FriOI GRGCYC 1 cut(s) 144
FspBI CTAG 1 cut(s) 1907
GlaI GCGC 4 cut(s) 190, 213, 363, 2144
HaeII RGCGCY 2 cut(s) 215, 365
HaeIII GGCC 2 cut(s) 1566, 1791
HapII CCGG 1 cut(s) 2119
HgaI GACGC 4 cut(s) 1715, 1959, 2126, 2134
HhaI GCGC 4 cut(s) 191, 214, 364, 2145
Hin1I GRCGYC 1 cut(s) 1726
Hin6I GCGC 4 cut(s) 189, 212, 362, 2143
HinP1I GCGC 4 cut(s) 189, 212, 362, 2143
HindIII AAGCTT 1 cut(s) 1589
HinfI GANTC 7 cut(s) 754, 986, 1135, 1226, 1232, 1737, 2002
HpaII CCGG 1 cut(s) 2119
HphI GGTGA 7 cut(s) 308, 336, 505, 595, 931, 953, 1273
Hpy166II GTNNAC 2 cut(s) 1161, 1387
Hpy188I TCNGA 4 cut(s) 146, 1231, 1276, 1648
Hpy188III TCNNGA 7 cut(s) 169, 751, 935, 1046, 1207, 1250, 1313
Hpy8I GTNNAC 2 cut(s) 1161, 1387
Hpy99I CGWCG 1 cut(s) 2142
HpyF10VI GCNNNNNNNGC 5 cut(s) 1361, 1636, 1817, 1829, 1882
HpyF3I CTNAG 9 cut(s) 143, 368, 851, 984, 1013, 1395, 1635, 1674, 2088
Hsp92I GRCGYC 1 cut(s) 1726
HspAI GCGC 4 cut(s) 189, 212, 362, 2143
Ksp22I TGATCA 1 cut(s) 1042
Kzo9I GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
LguI GCTCTTC 2 cut(s) 170, 1713
LmnI GCTCC 3 cut(s) 445, 1967, 2170
Lsp1109I GCAGC 8 cut(s) 43, 64, 256, 351, 550, 1318, 1807, 1819
LweI GCATC 4 cut(s) 1297, 1417, 1421, 2074
MaeI CTAG 1 cut(s) 1907
MalI GATC 9 cut(s) 84, 557, 891, 933, 1009, 1044, 1066, 1095, 1245
MbiI CCGCTC 1 cut(s) 1723
MboI GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
MfeI CAATTG 3 cut(s) 683, 1372, 1766
MflI RGATCY 3 cut(s) 555, 1093, 1243
MhlI GDGCHC 3 cut(s) 144, 841, 1480
MluCI AATT 9 cut(s) 325, 531, 683, 1053, 1335, 1340, 1372, 1766, 2046
MlyI GAGTC 2 cut(s) 995, 1731
MmeI TCCRAC 2 cut(s) 384, 2000
Mph1103I ATGCAT 1 cut(s) 466
MseI TTAA 5 cut(s) 426, 672, 777, 1338, 1458
MslI CAYNNNNRTG 2 cut(s) 128, 240
MspI CCGG 1 cut(s) 2119
MspR9I CCNGG 2 cut(s) 48, 900
MunI CAATTG 3 cut(s) 683, 1372, 1766
Mva1269I GAATGC 3 cut(s) 58, 326, 1701
MvaI CCWGG 2 cut(s) 48, 900
MvnI CGCG 1 cut(s) 2145
MwoI GCNNNNNNNGC 5 cut(s) 1361, 1636, 1817, 1829, 1882
NdeII GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
NlaIV GGNNCC 2 cut(s) 447, 1870
NmeAIII GCCGAG 1 cut(s) 1542
NmuCI GTSAC 3 cut(s) 176, 342, 1845
NsiI ATGCAT 1 cut(s) 466
NspI RCATGY 4 cut(s) 133, 731, 1393, 2177
PaeI GCATGC 1 cut(s) 2177
PagI TCATGA 1 cut(s) 750
PciI ACATGT 2 cut(s) 129, 1389
PciSI GCTCTTC 2 cut(s) 170, 1713
PctI GAATGC 3 cut(s) 58, 326, 1701
PfeI GAWTC 5 cut(s) 754, 1135, 1226, 1232, 2002
PflMI CCANNNNNTGG 1 cut(s) 1351
PleI GAGTC 2 cut(s) 994, 1731
PpsI GAGTC 2 cut(s) 994, 1731
PscI ACATGT 2 cut(s) 129, 1389
PsiI TTATAA 2 cut(s) 1025, 1665
Psp124BI GAGCTC 1 cut(s) 144
Psp6I CCWGG 2 cut(s) 46, 898
PspGI CCWGG 2 cut(s) 46, 898
PspN4I GGNNCC 2 cut(s) 447, 1870
PspPI GGNCC 1 cut(s) 28
PstI CTGCAG 2 cut(s) 1825, 2026
PsuI RGATCY 3 cut(s) 555, 1093, 1243
RsaI GTAC 3 cut(s) 353, 549, 1601
RsaNI GTAC 3 cut(s) 352, 548, 1600
RseI CAYNNNNRTG 2 cut(s) 128, 240
SacI GAGCTC 1 cut(s) 144
SapI GCTCTTC 2 cut(s) 170, 1713
SaqAI TTAA 5 cut(s) 426, 672, 777, 1338, 1458
Sau3AI GATC 9 cut(s) 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243
Sau96I GGNCC 1 cut(s) 28
SchI GAGTC 2 cut(s) 995, 1731
ScrFI CCNGG 2 cut(s) 48, 900
SduI GDGCHC 3 cut(s) 144, 841, 1480
SfaNI GCATC 4 cut(s) 1297, 1417, 1421, 2074
SfcI CTRYAG 2 cut(s) 1821, 2022
SinI GGWCC 1 cut(s) 28
SmiMI CAYNNNNRTG 2 cut(s) 128, 240
SmlI CTYRAG 1 cut(s) 1311
SmoI CTYRAG 1 cut(s) 1311
SphI GCATGC 1 cut(s) 2177
Sse9I AATT 9 cut(s) 325, 531, 683, 1053, 1335, 1340, 1372, 1766, 2046
SsiI CCGC 4 cut(s) 80, 1355, 1408, 1723
SspMI CTAG 1 cut(s) 1907
SstI GAGCTC 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 46, 898
StyI CCWWGG 1 cut(s) 99
TaqI TCGA 5 cut(s) 85, 92, 377, 892, 1224
TasI AATT 9 cut(s) 325, 531, 683, 1053, 1335, 1340, 1372, 1766, 2046
TatI WGTACW 1 cut(s) 547
TauI GCSGC 2 cut(s) 1358, 1726
TfiI GAWTC 5 cut(s) 754, 1135, 1226, 1232, 2002
Tru1I TTAA 5 cut(s) 426, 672, 777, 1338, 1458
Tru9I TTAA 5 cut(s) 426, 672, 777, 1338, 1458
TscAI CASTG 7 cut(s) 118, 187, 855, 1135, 1297, 2031, 2136
TseFI GTSAC 3 cut(s) 176, 342, 1845
TseI GCWGC 8 cut(s) 56, 77, 269, 364, 563, 1331, 1820, 1832
Tsp45I GTSAC 3 cut(s) 176, 342, 1845
TspGWI ACGGA 1 cut(s) 980
TspRI CASTG 7 cut(s) 118, 187, 855, 1135, 1297, 2031, 2136
Van91I CCANNNNNTGG 1 cut(s) 1351
VpaK11BI GGWCC 1 cut(s) 28
XagI CCTNNNNNAGG 1 cut(s) 1796
XapI RAATTY 1 cut(s) 1340
XceI RCATGY 4 cut(s) 133, 731, 1393, 2177
XmiI GTMKAC 1 cut(s) 1160
XspI CTAG 1 cut(s) 1907
Zsp2I ATGCAT 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.