PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25290 AT2G25290 AT2G25290 AT2G25290 |
| fragaria_vesca | FvH4_2g28600 FvH4_2g28600 FvH4_2g28600 |
| malus_domestica | MD15G1129300.v1.1 |
| prunus_persica | Prupe.1G484900_v2.0.a1 |
| pyrus_communis | pycom08g13150 pycom12646g00050 pycom15g11650 |
| rosa_chinensis | RchiOBHm_Chr6g0297371 |
| rosa_laevigata | RLG00000011607 |
| rosa_multiflora | Rmu_sc0004989.1_g000001 Rmu_sc0012701.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00170600 |
| rosa_rugosa | Rorug06G0271100 |
| rosa_samantha | Rh6AG382500 Rh6BG390600 Rh6CG395700 Rh6DG382700 |
| rosa_wichuraiana | Rw6G033320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1025, 1665 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1351, 2452 |
| AccBSI | CCGCTC | 1 cut(s) | 1723 |
| AccI | GTMKAC | 1 cut(s) | 1160 |
| AciI | CCGC | 4 cut(s) | 80, 1355, 1408, 1723 |
| AclWI | GGATC | 7 cut(s) | 90, 550, 897, 1015, 1072, 1088, 1251 |
| AcoI | YGGCCR | 1 cut(s) | 1564 |
| AcuI | CTGAAG | 2 cut(s) | 1629, 1640 |
| AcyI | GRCGYC | 1 cut(s) | 1726 |
| AfaI | GTAC | 4 cut(s) | 353, 549, 1601, 2328 |
| AfeI | AGCGCT | 2 cut(s) | 213, 363 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1351, 1798, 1864, 2395, 2452 |
| AflIII | ACRYGT | 2 cut(s) | 129, 1389 |
| AjnI | CCWGG | 2 cut(s) | 46, 898 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1766, 1798, 2282, 2314 |
| Alw21I | GWGCWC | 1 cut(s) | 144 |
| Alw26I | GTCTC | 2 cut(s) | 296, 1977 |
| AlwI | GGATC | 7 cut(s) | 90, 550, 897, 1015, 1072, 1088, 1251 |
| Ama87I | CYCGRG | 1 cut(s) | 306 |
| Aor51HI | AGCGCT | 2 cut(s) | 213, 363 |
| AoxI | GGCC | 2 cut(s) | 1564, 1789 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1829, 1861 |
| AspLEI | GCGC | 3 cut(s) | 191, 214, 364 |
| AspS9I | GGNCC | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 7 cut(s) | 308, 336, 505, 595, 931, 953, 1273 |
| AvaI | CYCGRG | 1 cut(s) | 306 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| BaeGI | GKGCMC | 2 cut(s) | 841, 1480 |
| BanII | GRGCYC | 1 cut(s) | 144 |
| BbsI | GAAGAC | 5 cut(s) | 114, 494, 635, 2163, 2208 |
| Bbv12I | GWGCWC | 1 cut(s) | 144 |
| BbvCI | CCTCAGC | 1 cut(s) | 1674 |
| BccI | CCATC | 4 cut(s) | 828, 1345, 1708, 1781 |
| BciT130I | CCWGG | 2 cut(s) | 48, 900 |
| BclI | TGATCA | 1 cut(s) | 1042 |
| BcoDI | GTCTC | 2 cut(s) | 296, 1977 |
| BfaI | CTAG | 2 cut(s) | 1907, 2330 |
| BfmI | CTRYAG | 2 cut(s) | 1821, 2022 |
| BfoI | RGCGCY | 2 cut(s) | 215, 365 |
| Bme1390I | CCNGG | 2 cut(s) | 48, 900 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmeT110I | CYCGRG | 1 cut(s) | 306 |
| BmgT120I | GGNCC | 1 cut(s) | 28 |
| BmiI | GGNNCC | 2 cut(s) | 447, 1870 |
| BmrFI | CCNGG | 2 cut(s) | 48, 900 |
| BmrI | ACTGGG | 1 cut(s) | 24 |
| BmsI | GCATC | 4 cut(s) | 1297, 1417, 1421, 2074 |
| BmuI | ACTGGG | 1 cut(s) | 24 |
| BpiI | GAAGAC | 5 cut(s) | 114, 494, 635, 2163, 2208 |
| BpmI | CTGGAG | 1 cut(s) | 2258 |
| Bpu10I | CCTNAGC | 2 cut(s) | 872, 1674 |
| BpuEI | CTTGAG | 1 cut(s) | 1296 |
| Bsa29I | ATCGAT | 1 cut(s) | 892 |
| BsaHI | GRCGYC | 1 cut(s) | 1726 |
| BsaI | GGTCTC | 1 cut(s) | 296 |
| BsaJI | CCNNGG | 4 cut(s) | 47, 99, 305, 347 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1351, 1798, 1864, 2395, 2452 |
| Bse1I | ACTGG | 4 cut(s) | 19, 1184, 1189, 2241 |
| Bse3DI | GCAATG | 3 cut(s) | 198, 1287, 1326 |
| BseBI | CCWGG | 2 cut(s) | 48, 900 |
| BseCI | ATCGAT | 1 cut(s) | 892 |
| BseDI | CCNNGG | 4 cut(s) | 47, 99, 305, 347 |
| BseGI | GGATG | 5 cut(s) | 109, 427, 973, 1412, 1792 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1351, 1798, 1864, 2395, 2452 |
| BseMI | GCAATG | 3 cut(s) | 198, 1287, 1326 |
| BseMII | CTCAG | 7 cut(s) | 157, 359, 842, 886, 1266, 1626, 1665 |
| BseNI | ACTGG | 4 cut(s) | 19, 1184, 1189, 2241 |
| BseRI | GAGGAG | 6 cut(s) | 638, 1724, 1814, 2255, 2348, 2351 |
| BseSI | GKGCMC | 2 cut(s) | 841, 1480 |
| BsgI | GTGCAG | 2 cut(s) | 59, 2113 |
| BshFI | GGCC | 2 cut(s) | 1566, 1791 |
| BshVI | ATCGAT | 1 cut(s) | 892 |
| BsiHKAI | GWGCWC | 1 cut(s) | 144 |
| BsiHKCI | CYCGRG | 1 cut(s) | 306 |
| BsiSI | CCGG | 1 cut(s) | 2360 |
| BslFI | GGGAC | 3 cut(s) | 118, 1139, 2247 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1351, 1798, 1864, 2395, 2452 |
| BsmAI | GTCTC | 2 cut(s) | 296, 1977 |
| BsmBI | CGTCTC | 1 cut(s) | 1977 |
| BsmFI | GGGAC | 3 cut(s) | 118, 1139, 2247 |
| BsmI | GAATGC | 3 cut(s) | 58, 326, 1701 |
| BsnI | GGCC | 2 cut(s) | 1566, 1791 |
| Bso31I | GGTCTC | 1 cut(s) | 296 |
| BsoBI | CYCGRG | 1 cut(s) | 306 |
| Bsp1286I | GDGCHC | 3 cut(s) | 144, 841, 1480 |
| Bsp1407I | TGTACA | 1 cut(s) | 547 |
| Bsp143I | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| BspACI | CCGC | 4 cut(s) | 80, 1355, 1408, 1723 |
| BspANI | GGCC | 2 cut(s) | 1566, 1791 |
| BspCNI | CTCAG | 7 cut(s) | 156, 360, 843, 885, 1267, 1627, 1666 |
| BspDI | ATCGAT | 1 cut(s) | 892 |
| BspHI | TCATGA | 1 cut(s) | 750 |
| BspLI | GGNNCC | 2 cut(s) | 447, 1870 |
| BspMAI | CTGCAG | 2 cut(s) | 1825, 2026 |
| BspPI | GGATC | 7 cut(s) | 90, 550, 897, 1015, 1072, 1088, 1251 |
| BspQI | GCTCTTC | 3 cut(s) | 170, 1713, 2447 |
| BspTNI | GGTCTC | 1 cut(s) | 296 |
| BsrBI | CCGCTC | 1 cut(s) | 1723 |
| BsrDI | GCAATG | 3 cut(s) | 198, 1287, 1326 |
| BsrGI | TGTACA | 1 cut(s) | 547 |
| BsrI | ACTGG | 4 cut(s) | 19, 1184, 1189, 2241 |
| BssECI | CCNNGG | 4 cut(s) | 47, 99, 305, 347 |
| BssMI | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| BssNI | GRCGYC | 1 cut(s) | 1726 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst2UI | CCWGG | 2 cut(s) | 48, 900 |
| Bst6I | CTCTTC | 8 cut(s) | 170, 702, 732, 759, 1068, 1713, 2358, 2447 |
| BstACI | GRCGYC | 1 cut(s) | 1726 |
| BstAUI | TGTACA | 1 cut(s) | 547 |
| BstC8I | GCNNGC | 2 cut(s) | 1410, 2117 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1796 |
| BstF5I | GGATG | 5 cut(s) | 109, 427, 973, 1412, 1792 |
| BstH2I | RGCGCY | 2 cut(s) | 215, 365 |
| BstHHI | GCGC | 3 cut(s) | 191, 214, 364 |
| BstKTI | GATC | 9 cut(s) | 85, 558, 892, 934, 1010, 1045, 1067, 1096, 1246 |
| BstMAI | GTCTC | 2 cut(s) | 296, 1977 |
| BstMBI | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1361, 1817, 1829, 1882, 2188 |
| BstNI | CCWGG | 2 cut(s) | 48, 900 |
| BstNSI | RCATGY | 3 cut(s) | 133, 731, 1393 |
| BstSCI | CCNGG | 2 cut(s) | 46, 898 |
| BstSFI | CTRYAG | 2 cut(s) | 1821, 2022 |
| BstSLI | GKGCMC | 2 cut(s) | 841, 1480 |
| BstV2I | GAAGAC | 5 cut(s) | 114, 494, 635, 2163, 2208 |
| BstX2I | RGATCY | 3 cut(s) | 555, 1093, 1243 |
| BstYI | RGATCY | 3 cut(s) | 555, 1093, 1243 |
| Bsu15I | ATCGAT | 1 cut(s) | 892 |
| BsuRI | GGCC | 2 cut(s) | 1566, 1791 |
| BsuTUI | ATCGAT | 1 cut(s) | 892 |
| BtsCI | GGATG | 5 cut(s) | 109, 427, 973, 1412, 1792 |
| BtsI | GCAGTG | 2 cut(s) | 111, 2031 |
| BtsIMutI | CAGTG | 7 cut(s) | 111, 187, 848, 1135, 1290, 2005, 2031 |
| Cac8I | GCNNGC | 2 cut(s) | 1410, 2117 |
| CciI | TCATGA | 1 cut(s) | 750 |
| CfoI | GCGC | 3 cut(s) | 191, 214, 364 |
| Cfr13I | GGNCC | 1 cut(s) | 28 |
| ClaI | ATCGAT | 1 cut(s) | 892 |
| CseI | GACGC | 3 cut(s) | 1715, 1959, 2157 |
| Csp6I | GTAC | 4 cut(s) | 352, 548, 1600, 2327 |
| CviQI | GTAC | 4 cut(s) | 352, 548, 1600, 2327 |
| DpnI | GATC | 9 cut(s) | 84, 557, 891, 933, 1009, 1044, 1066, 1095, 1245 |
| DpnII | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| EaeI | YGGCCR | 1 cut(s) | 1564 |
| Eam1104I | CTCTTC | 8 cut(s) | 170, 702, 732, 759, 1068, 1713, 2358, 2447 |
| EarI | CTCTTC | 8 cut(s) | 170, 702, 732, 759, 1068, 1713, 2358, 2447 |
| Ecl136II | GAGCTC | 1 cut(s) | 142 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco24I | GRGCYC | 1 cut(s) | 144 |
| Eco31I | GGTCTC | 1 cut(s) | 296 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| Eco47III | AGCGCT | 2 cut(s) | 213, 363 |
| Eco53kI | GAGCTC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 2 cut(s) | 1629, 1640 |
| Eco88I | CYCGRG | 1 cut(s) | 306 |
| EcoICRI | GAGCTC | 1 cut(s) | 142 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1796 |
| EcoRII | CCWGG | 2 cut(s) | 46, 898 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| EcoT22I | ATGCAT | 1 cut(s) | 466 |
| EcoT38I | GRGCYC | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| Esp3I | CGTCTC | 1 cut(s) | 1977 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1523, 1555, 1539, 1571, 1575, 1607 |
| FaqI | GGGAC | 3 cut(s) | 118, 1139, 2247 |
| FauI | CCCGC | 1 cut(s) | 1401 |
| FbaI | TGATCA | 1 cut(s) | 1042 |
| FblI | GTMKAC | 1 cut(s) | 1160 |
| FokI | GGATG | 5 cut(s) | 116, 434, 980, 1399, 1799 |
| FriOI | GRGCYC | 1 cut(s) | 144 |
| FspBI | CTAG | 2 cut(s) | 1907, 2330 |
| GlaI | GCGC | 3 cut(s) | 190, 213, 363 |
| GsuI | CTGGAG | 1 cut(s) | 2258 |
| HaeII | RGCGCY | 2 cut(s) | 215, 365 |
| HaeIII | GGCC | 2 cut(s) | 1566, 1791 |
| HapII | CCGG | 1 cut(s) | 2360 |
| HgaI | GACGC | 3 cut(s) | 1715, 1959, 2157 |
| HhaI | GCGC | 3 cut(s) | 191, 214, 364 |
| Hin1I | GRCGYC | 1 cut(s) | 1726 |
| Hin6I | GCGC | 3 cut(s) | 189, 212, 362 |
| HinP1I | GCGC | 3 cut(s) | 189, 212, 362 |
| HindIII | AAGCTT | 3 cut(s) | 1589, 2292, 2415 |
| HinfI | GANTC | 7 cut(s) | 754, 986, 1135, 1226, 1232, 1737, 2002 |
| HpaII | CCGG | 1 cut(s) | 2360 |
| HphI | GGTGA | 7 cut(s) | 308, 336, 505, 595, 931, 953, 1273 |
| Hpy166II | GTNNAC | 2 cut(s) | 1161, 1387 |
| Hpy188I | TCNGA | 4 cut(s) | 146, 1231, 1276, 1648 |
| Hpy188III | TCNNGA | 7 cut(s) | 169, 751, 935, 1046, 1207, 1250, 1313 |
| Hpy8I | GTNNAC | 2 cut(s) | 1161, 1387 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1361, 1817, 1829, 1882, 2188 |
| Hsp92I | GRCGYC | 1 cut(s) | 1726 |
| HspAI | GCGC | 3 cut(s) | 189, 212, 362 |
| Ksp22I | TGATCA | 1 cut(s) | 1042 |
| Kzo9I | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| LguI | GCTCTTC | 3 cut(s) | 170, 1713, 2447 |
| LmnI | GCTCC | 5 cut(s) | 445, 1967, 2188, 2268, 2391 |
| LweI | GCATC | 4 cut(s) | 1297, 1417, 1421, 2074 |
| MaeI | CTAG | 2 cut(s) | 1907, 2330 |
| MalI | GATC | 9 cut(s) | 84, 557, 891, 933, 1009, 1044, 1066, 1095, 1245 |
| MbiI | CCGCTC | 1 cut(s) | 1723 |
| MboI | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| MfeI | CAATTG | 3 cut(s) | 1372, 1766, 2348 |
| MflI | RGATCY | 3 cut(s) | 555, 1093, 1243 |
| MhlI | GDGCHC | 3 cut(s) | 144, 841, 1480 |
| MlyI | GAGTC | 1 cut(s) | 1731 |
| MmeI | TCCRAC | 4 cut(s) | 384, 2000, 2290, 2413 |
| Mph1103I | ATGCAT | 1 cut(s) | 466 |
| MseI | TTAA | 5 cut(s) | 426, 672, 777, 1338, 1458 |
| MslI | CAYNNNNRTG | 2 cut(s) | 128, 240 |
| MspI | CCGG | 1 cut(s) | 2360 |
| MspR9I | CCNGG | 2 cut(s) | 48, 900 |
| MunI | CAATTG | 3 cut(s) | 1372, 1766, 2348 |
| Mva1269I | GAATGC | 3 cut(s) | 58, 326, 1701 |
| MvaI | CCWGG | 2 cut(s) | 48, 900 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1361, 1817, 1829, 1882, 2188 |
| NdeII | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| NlaIV | GGNNCC | 2 cut(s) | 447, 1870 |
| NmeAIII | GCCGAG | 1 cut(s) | 1542 |
| NmuCI | GTSAC | 5 cut(s) | 176, 342, 941, 1845, 2306 |
| NsiI | ATGCAT | 1 cut(s) | 466 |
| NspI | RCATGY | 3 cut(s) | 133, 731, 1393 |
| PagI | TCATGA | 1 cut(s) | 750 |
| PciI | ACATGT | 2 cut(s) | 129, 1389 |
| PciSI | GCTCTTC | 3 cut(s) | 170, 1713, 2447 |
| PctI | GAATGC | 3 cut(s) | 58, 326, 1701 |
| PfeI | GAWTC | 6 cut(s) | 754, 986, 1135, 1226, 1232, 2002 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1351, 2452 |
| PleI | GAGTC | 1 cut(s) | 1731 |
| PpsI | GAGTC | 1 cut(s) | 1731 |
| PscI | ACATGT | 2 cut(s) | 129, 1389 |
| PsiI | TTATAA | 2 cut(s) | 1025, 1665 |
| Psp124BI | GAGCTC | 1 cut(s) | 144 |
| Psp6I | CCWGG | 2 cut(s) | 46, 898 |
| PspGI | CCWGG | 2 cut(s) | 46, 898 |
| PspN4I | GGNNCC | 2 cut(s) | 447, 1870 |
| PspPI | GGNCC | 1 cut(s) | 28 |
| PstI | CTGCAG | 2 cut(s) | 1825, 2026 |
| PsuI | RGATCY | 3 cut(s) | 555, 1093, 1243 |
| RsaI | GTAC | 4 cut(s) | 353, 549, 1601, 2328 |
| RsaNI | GTAC | 4 cut(s) | 352, 548, 1600, 2327 |
| RseI | CAYNNNNRTG | 2 cut(s) | 128, 240 |
| SacI | GAGCTC | 1 cut(s) | 144 |
| SapI | GCTCTTC | 3 cut(s) | 170, 1713, 2447 |
| SaqAI | TTAA | 5 cut(s) | 426, 672, 777, 1338, 1458 |
| Sau3AI | GATC | 9 cut(s) | 82, 555, 889, 931, 1007, 1042, 1064, 1093, 1243 |
| Sau96I | GGNCC | 1 cut(s) | 28 |
| SchI | GAGTC | 1 cut(s) | 1731 |
| ScrFI | CCNGG | 2 cut(s) | 48, 900 |
| SduI | GDGCHC | 3 cut(s) | 144, 841, 1480 |
| SfaNI | GCATC | 4 cut(s) | 1297, 1417, 1421, 2074 |
| SfcI | CTRYAG | 2 cut(s) | 1821, 2022 |
| SinI | GGWCC | 1 cut(s) | 28 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 128, 240 |
| SmlI | CTYRAG | 1 cut(s) | 1311 |
| SmoI | CTYRAG | 1 cut(s) | 1311 |
| SsiI | CCGC | 4 cut(s) | 80, 1355, 1408, 1723 |
| SspMI | CTAG | 2 cut(s) | 1907, 2330 |
| SstI | GAGCTC | 1 cut(s) | 144 |
| StyD4I | CCNGG | 2 cut(s) | 46, 898 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaqI | TCGA | 5 cut(s) | 85, 92, 377, 892, 1224 |
| TatI | WGTACW | 1 cut(s) | 547 |
| TauI | GCSGC | 2 cut(s) | 1358, 1726 |
| TfiI | GAWTC | 6 cut(s) | 754, 986, 1135, 1226, 1232, 2002 |
| Tru1I | TTAA | 5 cut(s) | 426, 672, 777, 1338, 1458 |
| Tru9I | TTAA | 5 cut(s) | 426, 672, 777, 1338, 1458 |
| TscAI | CASTG | 7 cut(s) | 118, 187, 855, 1135, 1297, 2012, 2031 |
| TseFI | GTSAC | 5 cut(s) | 176, 342, 941, 1845, 2306 |
| Tsp45I | GTSAC | 5 cut(s) | 176, 342, 941, 1845, 2306 |
| TspDTI | ATGAA | 9 cut(s) | 112, 120, 767, 1224, 1485, 1527, 1856, 2031, 2088 |
| TspGWI | ACGGA | 1 cut(s) | 980 |
| TspRI | CASTG | 7 cut(s) | 118, 187, 855, 1135, 1297, 2012, 2031 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1351, 2452 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1796 |
| XceI | RCATGY | 3 cut(s) | 133, 731, 1393 |
| XmiI | GTMKAC | 1 cut(s) | 1160 |
| XspI | CTAG | 2 cut(s) | 1907, 2330 |
| Zsp2I | ATGCAT | 1 cut(s) | 466 |