Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006442

Physical Location & Seq

Genomic Coordinates Reverse (-)

22820760 .. 22827629

Gene Structure 6870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g29420.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGGAGGCCAATGCCGGAATGGTCGCCGGCTCGTACAAGCGCAACGAGCTCGTTCGGATTCGTCACGATTCCGATAGCTCTTCAAAGCCCTTGAAGAATCTGAATGGCCAGATATGTCAGATTTGCGGTGACACTGTTGGACTTACAGCTACTGGTGATGTCTTTGTTGCCTGTAATGAGTGTGCCTTCCCTGTGTGTCGGCCTTGTTATGAGTATGAGCGGAAAGATGGGAACCAGGCTTGTCCACAATGCAAGACTAGATATAAGAGGCACAAAGGGAGTCCTCGTGTGGACGGAGATGAGGATGAGGACGACATTGATGATCTTGAGAATGAGTTCAATTACGCACAAGGAACTAGACGCCAGTGGCAGGGAGATGATCCTGACCTCTCATCTTCCTCTAGACATGAATCTGGACAACCAATCCCCCTTCTCACAAATGGACAGTCGGTTTCTGGTGAGATTCCCTGTGCTACTCCTGACAACCAGTCTGTGCGAACAACATCAGGGCCTTTGGATCCACGGCAGCCAGTTCCCGTGAGAATAGTGGATCCTTCGAAGGACTTAAATTCTTATGGGCTAGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGGTGGAAACTCAAACAGGACAAAAATATAATGCAGATTACCAGTAGATATACTGAAGGAAAGGGGGATACGGAAGGCACTGGTTCAAACGGAGAAGAACTCCAAATGGCTGATGATGCTCGACAACCTCTGAGTCGTATTGTTCCCATCTCTTCCTCTCATCTGACACCGTATCGTGTTGTGATCATACTTCGGCTTATCATTTTGTGCTTCTTTTTGCAATACCGTGCAACTCACCCAGTGAAAGATGCATATCCATTATGGCTAATATCAGTCATCTGTGAGATTTGGTTTGCTTTTTCATGGCTTCTGGATCAGTTTCCAAAATGGTTTCCCATAAATCGTGAGACCTATCTAGACAGGCTCGCACTGAGGTATGACCGTGATGGGGAACCATCTCAGTTAGCTCCAGTAGATGTGTTCGTGAGTACAGTGGATCCCATGAAAGAACCTCCTCTGGTTACAGCCAACACAGTTTTGTCCATACTTTCTGTGGATTACCCTGTGGACAAAATCTCTTGCTATGTATCAGATGATGGATCTGCAATGCTGACATTTGAATCCCTTTCTGAAACTGCGGAGTTTGCAAGAAAGTGGGTGCCGTTCTGCAAGAAACACAACATTGAGCCTAGAGCTCCTGAGTTTTATTTTGCTCAAAAGATTGATTACTTAAAAGACAAGATACAACCTTCTTTTGTTAAAGAGCGCAGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTAAGGATCAATGCCTTGGTTGCGAAGGCACAGAAGATGCCTGAAGAAGGTTGGACAATGCAGGATGGGACTCCATGGCCTGGGAACAATTCTAGGGATCATCCTGGAATGATCCAGGTCTTCTTAGGCCACAGTGGGGGCCTTGATACAGATGGCAACGAGCTGCCTCGACTTGTGTATGTTTCTCGTGAGAAGAGACCTGGCTTCCAGCATCACAAAAAAGCTGGAGCAATGAATGCATTGATTCGGGTTTCAGCTGTCTTGACAAATGGTGCATATCTTTTGAATGTCGATTGTGATCACTACTTCAATAACAGTAAAGCCGTCAAGGAAGCCATGTGTTTCATGATGGACCCAGCTTATGGGAAGAAGACCTGCTATGTACAGTTCCCACAACGTTTTGATGGGATTGATATGCACGATCGATATGCCAATCGTAACATTGTCTTCTTCGATATCAACTTGAAAGGGTTGGATGGCATCCAGGGTCCAGTCTATGTGGGAACTGGTTGTTGTTTCAACAGGCAAGCTCTATATGGGTACGATCCCGTTTTGACTGAGGAAGATTTGGAACCAAACATCATCATCAAGAGTTGCTGTGGTTCAAGAAAGAAGGGAAAGACCAGCAATAAGAAGTATATTGACAAGAAGAGGGCTGTAAAAAGAACTGAATCTACCATTCCCATTTTCAATATGGAAGACATTGAGGAGGGTGTTGAAGGTTATGATGATGAGAGGTCCCTTCTTATGTCTCAAAAGAGCTTAGAGAAGCGTTTTGGTCAATCTCCAGTTTTTATTGCAGCCACCTTCATGGAACAAGGGGGCATTCCACCTACGACAAACCCTGCAACTCTTTTGAAGGAAGCCATACATGTTATAAGCTGTGGATATGAAGACAAGACCGAATGGGGAAAAGAGATCGGATGGATCTATGGTTCTGTGACTGAAGATATTTTAACCGGGTTTAAGATGCATGCTCGTGGTTGGATATCAGTCTATTGCATGCCTCCCCGCCCAGCATTCAAGGGGTCTGCTCCCATCAATCTTTCTGATCGTTTGAACCAGGTGCTTCGGTGGGCATTGGGATCTATTGAAATTTTGCTCAGCAGACATTGTCCCATATGGTATGGCTACAATGGAAGAATGAAGCTTTTGGAGAGAATTGCATACATCAATACCATTGTTTATCCCCTTACCTCCATACCACTGATTGCATACTGTATGCTTCCTGCGTTTTGCCTTCTCACAAATAAATTCATCATTCCTGAGATAAGCAACTTCGCTAGTATGTGGTTTATTCTTCTCTTCGTTTCGATTGCTGCAACTGGTATTCTTGAGCTCAGGTGGAGTGGAGTTGGTATTGATGACTGGTGGAGAAATGAACAGTTCTGGGTCATTGGTGGAACATCTGCTCATCTTTTCGCTGTCTTCCAAGGTCTCCTAAAAGTTCTTGCCGGGATTGATACCAACTTCACTGTCACGTCAAAGGCCTCTGATGAGGATGGGGATTTTGCAGAGCTTTATGTGTTTAAATGGACATCACTTCTCATCCCTCCCACCACGGTTCTCATCGTGAACTTGGTAGGTATTGTGGCCGGTGTTTCATATGCCATAAACAGTGGGTACCAATCTTGGGGGCCACTTTTTGGCAAACTGTTTTTCGCCATGTGGGTCGTTGCCCATCTTTACCCATTCTTGAAGGGTCTGTTGGGTCGCCAAAATCGTACCCCTACAATCGTCATTGTGTGGTCTATCCTCCTTGCTTCTATATTTTCCTTGCTATGGGTGCGCATCGATCCATTCACATCCGACGCCACAAAAGCTGCTGCAAAAGGTCAATGTGGCGTCAACTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009628 GO:0009651 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042538 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1070

Amino Acids

120.47

Weight (kDa)

6.34

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	29 - 105	2e-45	Zinc-binding RING-finger
zf-RING_4	PF14570	39 - 89	8.1e-06	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	345 - 608	3.2e-165	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32410
fragaria_vesca	FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420
malus_domestica	MD08G1147200.v1.1 MD15G1123200.v1.1
prunus_persica	Prupe.1G478600_v2.0.a1 Prupe.1G478600_v2.0.a1
pyrus_communis	pycom08g12420 pycom15g11100
rosa_chinensis	RchiOBHm_Chr6g0298221
rosa_laevigata	RLG00000011525
rosa_multiflora	Rmu_sc0017507.1_g000003
rosa_roxburghii	Rroxscaffold_7G00169850
rosa_rugosa	Rorug06G0279600 Rorug06G0279600
rosa_samantha	Rh6AG389900 Rh6BG398300 Rh6CG404200 Rh6DG390900
rosa_wichuraiana	Rw6G034040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2231
Acc16I	TGCGCA	1 cut(s)	3143
Acc36I	ACCTGC	1 cut(s)	1736
Acc65I	GGTACC	1 cut(s)	2976
AccB1I	GGYRCC	2 cut(s)	1210, 2976
AccB7I	CCANNNNNTGG	3 cut(s)	1433, 1715, 2999
AccBSI	CCGCTC	1 cut(s)	220
AciI	CCGC	4 cut(s)	126, 220, 1190, 2365
AclI	AACGTT	1 cut(s)	1750
AcoI	YGGCCR	2 cut(s)	106, 2946
AcsI	RAATTY	4 cut(s)	568, 1346, 2448, 2606
AcuI	CTGAAG	3 cut(s)	687, 1416, 2319
AcyI	GRCGYC	3 cut(s)	361, 3165, 3198
AdeI	CACNNNGTG	1 cut(s)	853
AfaI	GTAC	6 cut(s)	35, 1042, 1737, 1895, 2978, 3079
AfiI	CCNNNNNNNGG	9 cut(s)	370, 1000, 1400, 1433, 1489, 1715, 2986, 2999, 3135
AflIII	ACRYGT	1 cut(s)	2224
AhdI	GACNNNNNGTC	1 cut(s)	487
AjiI	CACGTC	1 cut(s)	2835
AjnI	CCWGG	7 cut(s)	234, 1432, 1456, 1467, 1552, 1836, 2415
AjuI	GAANNNNNNNTTGG	2 cut(s)	3044, 3076
AloI	GAACNNNNNNTCC	2 cut(s)	2272, 2304
Alw21I	GWGCWC	3 cut(s)	51, 1249, 2694
Alw26I	GTCTC	4 cut(s)	953, 1543, 2109, 2795
AlwNI	CAGNNNCTG	1 cut(s)	152
ApeKI	GCWGC	6 cut(s)	526, 1516, 2153, 2672, 3176, 3179
ApoI	RAATTY	4 cut(s)	568, 1346, 2448, 2606
ArsI	GACNNNNNNTTYG	2 cut(s)	431, 463
Asp700I	GAANNNNTTC	1 cut(s)	335
Asp718I	GGTACC	1 cut(s)	2976
AspLEI	GCGC	3 cut(s)	42, 1320, 3144
AspS9I	GGNCC	6 cut(s)	509, 1492, 1705, 1841, 2091, 2990
AsuC2I	CCSGG	2 cut(s)	2314, 2809
AsuHPI	GGTGA	4 cut(s)	140, 167, 470, 839
AsuII	TTCGAA	1 cut(s)	557
AvaII	GGWCC	3 cut(s)	1705, 1841, 2091
BalI	TGGCCA	1 cut(s)	108
BamHI	GGATCC	3 cut(s)	517, 550, 1048
BanI	GGYRCC	2 cut(s)	1210, 2976
BanII	GRGCYC	3 cut(s)	51, 1249, 2694
BauI	CACGAG	3 cut(s)	285, 1539, 2331
BbsI	GAAGAC	6 cut(s)	1465, 1730, 1792, 2058, 2253, 2773
Bbv12I	GWGCWC	3 cut(s)	51, 1249, 2694
BbvI	GCAGC	6 cut(s)	538, 1503, 2165, 2659, 3163, 3166
BceAI	ACGGC	3 cut(s)	539, 1198, 1661
BcgI	CGANNNNNNTGC	4 cut(s)	31, 65, 1763, 1797
BciT130I	CCWGG	7 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2417
BciVI	GTATCC	1 cut(s)	673
BclI	TGATCA	2 cut(s)	795, 1651
BcnI	CCSGG	2 cut(s)	2314, 2809
BcoDI	GTCTC	4 cut(s)	953, 1543, 2109, 2795
BfaI	CTAG	8 cut(s)	258, 357, 402, 581, 968, 1242, 1446, 2637
BfuAI	ACCTGC	1 cut(s)	1736
BfuI	GTATCC	1 cut(s)	673
BisI	GCNGC	6 cut(s)	527, 1517, 2154, 2673, 3177, 3180
BlpI	GCTNAGC	1 cut(s)	2456
BlsI	GCNGC	6 cut(s)	528, 1518, 2155, 2674, 3178, 3181
Bme1390I	CCNGG	9 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2314, 2417, 2809
Bme18I	GGWCC	3 cut(s)	1705, 1841, 2091
BmeRI	GACNNNNNGTC	1 cut(s)	487
BmgBI	CACGTC	1 cut(s)	2835
BmgT120I	GGNCC	6 cut(s)	509, 1492, 1705, 1841, 2091, 2990
BmrFI	CCNGG	9 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2314, 2417, 2809
BmrI	ACTGGG	1 cut(s)	845
BmsI	GCATC	7 cut(s)	718, 850, 1380, 1573, 1842, 2313, 3153
BmuI	ACTGGG	1 cut(s)	845
BpiI	GAAGAC	6 cut(s)	1465, 1730, 1792, 2058, 2253, 2773
BplI	GAGNNNNNCTC	2 cut(s)	696, 728
BpmI	CTGGAG	3 cut(s)	1005, 1599, 2124
Bpu10I	CCTNAGC	1 cut(s)	2693
Bpu1102I	GCTNAGC	1 cut(s)	2456
Bpu14I	TTCGAA	1 cut(s)	557
BpuEI	CTTGAG	2 cut(s)	347, 2708
BpuMI	CCSGG	2 cut(s)	2314, 2809
Bsa29I	ATCGAT	2 cut(s)	1777, 3147
BsaBI	GATNNNNATC	2 cut(s)	864, 1650
BsaHI	GRCGYC	3 cut(s)	361, 3165, 3198
BsaI	GGTCTC	3 cut(s)	953, 1543, 2795
BsaJI	CCNNGG	7 cut(s)	521, 1368, 1427, 1433, 1837, 2785, 2913
BsaXI	ACNNNNNCTCC	2 cut(s)	271, 301
Bsc4I	CCNNNNNNNGG	9 cut(s)	370, 1000, 1400, 1433, 1489, 1715, 2986, 2999, 3135
Bse118I	RCCGGY	2 cut(s)	26, 2948
Bse3DI	GCAATG	3 cut(s)	1164, 1332, 1590
Bse8I	GATNNNNATC	2 cut(s)	864, 1650
BseBI	CCWGG	7 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2417
BseCI	ATCGAT	2 cut(s)	1777, 3147
BseDI	CCNNGG	7 cut(s)	521, 1368, 1427, 1433, 1837, 2785, 2913
BseGI	GGATG	9 cut(s)	310, 1423, 1453, 1833, 1834, 2282, 2860, 2901, 3158
BseJI	GATNNNNATC	2 cut(s)	864, 1650
BseLI	CCNNNNNNNGG	9 cut(s)	370, 1000, 1400, 1433, 1489, 1715, 2986, 2999, 3135
BseMI	GCAATG	3 cut(s)	1164, 1332, 1590
BseMII	CTCAG	8 cut(s)	734, 974, 1025, 1242, 1902, 2470, 2610, 2707
BseRI	GAGGAG	2 cut(s)	1056, 2075
BseXI	GCAGC	6 cut(s)	538, 1503, 2165, 2659, 3163, 3166
BseYI	CCCAGC	2 cut(s)	1708, 2368
Bsh1285I	CGRYCG	1 cut(s)	1777
BshNI	GGYRCC	2 cut(s)	1210, 2976
BshVI	ATCGAT	2 cut(s)	1777, 3147
BsiEI	CGRYCG	1 cut(s)	1777
BsiHKAI	GWGCWC	3 cut(s)	51, 1249, 2694
BsiSI	CCGG	5 cut(s)	15, 27, 2313, 2808, 2949
BslFI	GGGAC	3 cut(s)	1435, 2077, 2454
BslI	CCNNNNNNNGG	9 cut(s)	370, 1000, 1400, 1433, 1489, 1715, 2986, 2999, 3135
BsmAI	GTCTC	4 cut(s)	953, 1543, 2109, 2795
BsmFI	GGGAC	3 cut(s)	1435, 2077, 2454
BsmI	GAATGC	3 cut(s)	1594, 2178, 2372
Bso31I	GGTCTC	3 cut(s)	953, 1543, 2795
Bsp119I	TTCGAA	1 cut(s)	557
Bsp1286I	GDGCHC	3 cut(s)	51, 1249, 2694
Bsp1407I	TGTACA	1 cut(s)	1735
Bsp1720I	GCTNAGC	1 cut(s)	2456
Bsp19I	CCATGG	1 cut(s)	1427
BspACI	CCGC	4 cut(s)	126, 220, 1190, 2365
BspCNI	CTCAG	8 cut(s)	735, 975, 1024, 1243, 1903, 2469, 2611, 2706
BspDI	ATCGAT	2 cut(s)	1777, 3147
BspHI	TCATGA	1 cut(s)	1698
BspMI	ACCTGC	1 cut(s)	1736
BspQI	GCTCTTC	1 cut(s)	85
BspT104I	TTCGAA	1 cut(s)	557
BspT107I	GGYRCC	2 cut(s)	1210, 2976
BspTNI	GGTCTC	3 cut(s)	953, 1543, 2795
BsrBI	CCGCTC	1 cut(s)	220
BsrDI	GCAATG	3 cut(s)	1164, 1332, 1590
BsrFI	RCCGGY	2 cut(s)	26, 2948
BsrGI	TGTACA	1 cut(s)	1735
BssAI	RCCGGY	2 cut(s)	26, 2948
BssECI	CCNNGG	7 cut(s)	521, 1368, 1427, 1433, 1837, 2785, 2913
BssNI	GRCGYC	3 cut(s)	361, 3165, 3198
BssSI	CACGAG	3 cut(s)	285, 1539, 2331
BssT1I	CCWWGG	3 cut(s)	1368, 1427, 2785
Bst2BI	CACGAG	3 cut(s)	285, 1539, 2331
Bst2UI	CCWGG	7 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2417
Bst6I	CTCTTC	6 cut(s)	85, 769, 1325, 1541, 1997, 2663
BstACI	GRCGYC	3 cut(s)	361, 3165, 3198
BstAPI	GCANNNNNTGC	1 cut(s)	1589
BstAUI	TGTACA	1 cut(s)	1735
BstBI	TTCGAA	1 cut(s)	557
BstC8I	GCNNGC	5 cut(s)	28, 978, 1881, 2328, 2357
BstDSI	CCRYGG	3 cut(s)	521, 1427, 2913
BstENI	CCTNNNNNAGG	1 cut(s)	1398
BstF5I	GGATG	9 cut(s)	310, 1423, 1453, 1833, 1834, 2282, 2860, 2901, 3158
BstHHI	GCGC	3 cut(s)	42, 1320, 3144
BstMAI	GTCTC	4 cut(s)	953, 1543, 2109, 2795
BstMCI	CGRYCG	1 cut(s)	1777
BstMWI	GCNNNNNNNGC	7 cut(s)	46, 728, 1196, 1373, 1589, 3139, 3173
BstNI	CCWGG	7 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2417
BstNSI	RCATGY	3 cut(s)	2228, 2330, 2359
BstSCI	CCNGG	9 cut(s)	234, 1432, 1456, 1467, 1552, 1836, 2312, 2415, 2807
BstV1I	GCAGC	6 cut(s)	538, 1503, 2165, 2659, 3163, 3166
BstV2I	GAAGAC	6 cut(s)	1465, 1730, 1792, 2058, 2253, 2773
BstX2I	RGATCY	6 cut(s)	517, 550, 1048, 1151, 2280, 2438
BstXI	CCANNNNNNTGG	1 cut(s)	2164
BstYI	RGATCY	6 cut(s)	517, 550, 1048, 1151, 2280, 2438
Bsu15I	ATCGAT	2 cut(s)	1777, 3147
BsuI	GTATCC	1 cut(s)	673
BsuTUI	ATCGAT	2 cut(s)	1777, 3147
BtgI	CCRYGG	3 cut(s)	521, 1427, 2913
BtrI	CACGTC	1 cut(s)	2835
BtsCI	GGATG	9 cut(s)	310, 1423, 1453, 1833, 1834, 2282, 2860, 2901, 3158
BveI	ACCTGC	1 cut(s)	1736
Cac8I	GCNNGC	5 cut(s)	28, 978, 1881, 2328, 2357
CaiI	CAGNNNCTG	1 cut(s)	152
CciI	TCATGA	1 cut(s)	1698
CfoI	GCGC	3 cut(s)	42, 1320, 3144
Cfr10I	RCCGGY	2 cut(s)	26, 2948
Cfr13I	GGNCC	6 cut(s)	509, 1492, 1705, 1841, 2091, 2990
ClaI	ATCGAT	2 cut(s)	1777, 3147
CseI	GACGC	3 cut(s)	369, 3173, 3187
CsiI	ACCWGGT	1 cut(s)	2415
Csp6I	GTAC	6 cut(s)	34, 1041, 1736, 1894, 2977, 3078
CviQI	GTAC	6 cut(s)	34, 1041, 1736, 1894, 2977, 3078
DraI	TTTAAA	1 cut(s)	2884
DraIII	CACNNNGTG	1 cut(s)	853
DriI	GACNNNNNGTC	1 cut(s)	487
EaeI	YGGCCR	2 cut(s)	106, 2946
Eam1104I	CTCTTC	6 cut(s)	85, 769, 1325, 1541, 1997, 2663
Eam1105I	GACNNNNNGTC	1 cut(s)	487
EarI	CTCTTC	6 cut(s)	85, 769, 1325, 1541, 1997, 2663
Ecl136II	GAGCTC	3 cut(s)	49, 1247, 2692
Eco130I	CCWWGG	3 cut(s)	1368, 1427, 2785
Eco147I	AGGCCT	1 cut(s)	2843
Eco24I	GRGCYC	3 cut(s)	51, 1249, 2694
Eco31I	GGTCTC	3 cut(s)	953, 1543, 2795
Eco32I	GATATC	2 cut(s)	1810, 2343
Eco47I	GGWCC	3 cut(s)	1705, 1841, 2091
Eco53kI	GAGCTC	3 cut(s)	49, 1247, 2692
Eco57I	CTGAAG	3 cut(s)	687, 1416, 2319
EcoICRI	GAGCTC	3 cut(s)	49, 1247, 2692
EcoNI	CCTNNNNNAGG	1 cut(s)	1398
EcoO109I	RGGNCCY	3 cut(s)	509, 1492, 2091
EcoRI	GAATTC	1 cut(s)	1346
EcoRII	CCWGG	7 cut(s)	234, 1432, 1456, 1467, 1552, 1836, 2415
EcoRV	GATATC	2 cut(s)	1810, 2343
EcoT14I	CCWWGG	3 cut(s)	1368, 1427, 2785
EcoT22I	ATGCAT	3 cut(s)	865, 1594, 2328
EcoT38I	GRGCYC	3 cut(s)	51, 1249, 2694
ErhI	CCWWGG	3 cut(s)	1368, 1427, 2785
FaqI	GGGAC	3 cut(s)	1435, 2077, 2454
FauI	CCCGC	1 cut(s)	2372
FauNDI	CATATG	2 cut(s)	2474, 2959
FbaI	TGATCA	2 cut(s)	795, 1651
Fnu4HI	GCNGC	6 cut(s)	527, 1517, 2154, 2673, 3177, 3180
FokI	GGATG	9 cut(s)	317, 1430, 1440, 1820, 1841, 2289, 2867, 2888, 3145
FriOI	GRGCYC	3 cut(s)	51, 1249, 2694
Fsp4HI	GCNGC	6 cut(s)	527, 1517, 2154, 2673, 3177, 3180
FspAI	RTGCGCAY	1 cut(s)	3143
FspBI	CTAG	8 cut(s)	258, 357, 402, 581, 968, 1242, 1446, 2637
FspI	TGCGCA	1 cut(s)	3143
GlaI	GCGC	3 cut(s)	41, 1319, 3143
GluI	GCNGC	6 cut(s)	527, 1517, 2154, 2673, 3177, 3180
GsaI	CCCAGC	2 cut(s)	1712, 2372
GsuI	CTGGAG	3 cut(s)	1005, 1599, 2124
HapII	CCGG	5 cut(s)	15, 27, 2313, 2808, 2949
HgaI	GACGC	3 cut(s)	369, 3173, 3187
HhaI	GCGC	3 cut(s)	42, 1320, 3144
Hin1I	GRCGYC	3 cut(s)	361, 3165, 3198
Hin6I	GCGC	3 cut(s)	40, 1318, 3142
HinP1I	GCGC	3 cut(s)	40, 1318, 3142
HincII	GTYRAC	2 cut(s)	592, 3202
HindII	GTYRAC	2 cut(s)	592, 3202
HindIII	AAGCTT	1 cut(s)	2501
HpaII	CCGG	5 cut(s)	15, 27, 2313, 2808, 2949
HphI	GGTGA	4 cut(s)	140, 167, 470, 839
Hpy166II	GTNNAC	6 cut(s)	245, 292, 592, 1120, 2929, 3202
Hpy8I	GTNNAC	6 cut(s)	245, 292, 592, 1120, 2929, 3202
Hpy99I	CGWCG	1 cut(s)	3167
HpyCH4IV	ACGT	2 cut(s)	1750, 2834
HpyF10VI	GCNNNNNNNGC	7 cut(s)	46, 728, 1196, 1373, 1589, 3139, 3173
HpySE526I	ACGT	2 cut(s)	1750, 2834
Hsp92I	GRCGYC	3 cut(s)	361, 3165, 3198
HspAI	GCGC	3 cut(s)	40, 1318, 3142
KpnI	GGTACC	1 cut(s)	2980
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Ksp22I	TGATCA	2 cut(s)	795, 1651
LguI	GCTCTTC	1 cut(s)	85
LmnI	GCTCC	4 cut(s)	1024, 1252, 1580, 2392
Lsp1109I	GCAGC	6 cut(s)	538, 1503, 2165, 2659, 3163, 3166
LweI	GCATC	7 cut(s)	718, 850, 1380, 1573, 1842, 2313, 3153
MabI	ACCWGGT	1 cut(s)	2415
MaeI	CTAG	8 cut(s)	258, 357, 402, 581, 968, 1242, 1446, 2637
MaeII	ACGT	2 cut(s)	1750, 2834
MaeIII	GTNAC	6 cut(s)	62, 128, 1072, 1790, 2293, 2830
MbiI	CCGCTC	1 cut(s)	220
MflI	RGATCY	6 cut(s)	517, 550, 1048, 1151, 2280, 2438
MhlI	GDGCHC	3 cut(s)	51, 1249, 2694
MlsI	TGGCCA	1 cut(s)	108
MluCI	AATT	7 cut(s)	340, 568, 1346, 1441, 2448, 2514, 2606
MluNI	TGGCCA	1 cut(s)	108
MlyI	GAGTC	3 cut(s)	289, 754, 1417
MmeI	TCCRAC	5 cut(s)	118, 1385, 1806, 2318, 3186
Mox20I	TGGCCA	1 cut(s)	108
Mph1103I	ATGCAT	3 cut(s)	865, 1594, 2328
MroNI	GCCGGC	1 cut(s)	26
MroXI	GAANNNNTTC	1 cut(s)	335
MscI	TGGCCA	1 cut(s)	108
MseI	TTAA	6 cut(s)	566, 1283, 1311, 2309, 2319, 2883
MslI	CAYNNNNRTG	2 cut(s)	2162, 2331
Msp20I	TGGCCA	1 cut(s)	108
MspA1I	CMGCKG	1 cut(s)	1610
MspI	CCGG	5 cut(s)	15, 27, 2313, 2808, 2949
MspR9I	CCNGG	9 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2314, 2417, 2809
Mva1269I	GAATGC	3 cut(s)	1594, 2178, 2372
MvaI	CCWGG	7 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2417
MwoI	GCNNNNNNNGC	7 cut(s)	46, 728, 1196, 1373, 1589, 3139, 3173
NaeI	GCCGGC	1 cut(s)	28
NciI	CCSGG	2 cut(s)	2314, 2809
NcoI	CCATGG	1 cut(s)	1427
NdeI	CATATG	2 cut(s)	2474, 2959
NgoMIV	GCCGGC	1 cut(s)	26
NmuCI	GTSAC	4 cut(s)	62, 128, 2293, 2830
NsbI	TGCGCA	1 cut(s)	3143
NsiI	ATGCAT	3 cut(s)	865, 1594, 2328
NspI	RCATGY	3 cut(s)	2228, 2330, 2359
NspV	TTCGAA	1 cut(s)	557
PaeI	GCATGC	2 cut(s)	2330, 2359
PagI	TCATGA	1 cut(s)	1698
PceI	AGGCCT	1 cut(s)	2843
PciI	ACATGT	1 cut(s)	2224
PciSI	GCTCTTC	1 cut(s)	85
PcsI	WCGNNNNNNNCGW	1 cut(s)	3073
PctI	GAATGC	3 cut(s)	1594, 2178, 2372
PdiI	GCCGGC	1 cut(s)	28
PdmI	GAANNNNTTC	1 cut(s)	335
PfeI	GAWTC	8 cut(s)	58, 68, 97, 410, 463, 1172, 1597, 2024
PflFI	GACNNNGTC	1 cut(s)	2466
PflMI	CCANNNNNTGG	3 cut(s)	1433, 1715, 2999
PfoI	TCCNGGA	1 cut(s)	1456
PkrI	GCNGC	6 cut(s)	528, 1518, 2155, 2674, 3178, 3181
Ple19I	CGATCG	1 cut(s)	1777
PleI	GAGTC	3 cut(s)	288, 753, 1417
PpsI	GAGTC	3 cut(s)	288, 753, 1417
PpuMI	RGGWCCY	1 cut(s)	2091
PscI	ACATGT	1 cut(s)	2224
PsiI	TTATAA	1 cut(s)	2231
Psp124BI	GAGCTC	3 cut(s)	51, 1249, 2694
Psp1406I	AACGTT	1 cut(s)	1750
Psp5II	RGGWCCY	1 cut(s)	2091
Psp6I	CCWGG	7 cut(s)	234, 1432, 1456, 1467, 1552, 1836, 2415
PspFI	CCCAGC	2 cut(s)	1708, 2368
PspGI	CCWGG	7 cut(s)	234, 1432, 1456, 1467, 1552, 1836, 2415
PspPI	GGNCC	6 cut(s)	509, 1492, 1705, 1841, 2091, 2990
PspPPI	RGGWCCY	1 cut(s)	2091
PsrI	GAACNNNNNNTAC	2 cut(s)	2011, 2043
PstNI	CAGNNNCTG	1 cut(s)	152
PsuI	RGATCY	6 cut(s)	517, 550, 1048, 1151, 2280, 2438
PsyI	GACNNNGTC	1 cut(s)	2466
PvuI	CGATCG	1 cut(s)	1777
PvuII	CAGCTG	1 cut(s)	1610
RsaI	GTAC	6 cut(s)	35, 1042, 1737, 1895, 2978, 3079
RsaNI	GTAC	6 cut(s)	34, 1041, 1736, 1894, 2977, 3078
RseI	CAYNNNNRTG	2 cut(s)	2162, 2331
SacI	GAGCTC	3 cut(s)	51, 1249, 2694
SapI	GCTCTTC	1 cut(s)	85
SaqAI	TTAA	6 cut(s)	566, 1283, 1311, 2309, 2319, 2883
SatI	GCNGC	6 cut(s)	527, 1517, 2154, 2673, 3177, 3180
Sau96I	GGNCC	6 cut(s)	509, 1492, 1705, 1841, 2091, 2990
SchI	GAGTC	3 cut(s)	289, 754, 1417
ScrFI	CCNGG	9 cut(s)	236, 1434, 1458, 1469, 1554, 1838, 2314, 2417, 2809
SduI	GDGCHC	3 cut(s)	51, 1249, 2694
SexAI	ACCWGGT	1 cut(s)	2415
SfaNI	GCATC	7 cut(s)	718, 850, 1380, 1573, 1842, 2313, 3153
SfuI	TTCGAA	1 cut(s)	557
SinI	GGWCC	3 cut(s)	1705, 1841, 2091
SmiMI	CAYNNNNRTG	2 cut(s)	2162, 2331
SmlI	CTYRAG	2 cut(s)	326, 2687
SmoI	CTYRAG	2 cut(s)	326, 2687
SphI	GCATGC	2 cut(s)	2330, 2359
Sse9I	AATT	7 cut(s)	340, 568, 1346, 1441, 2448, 2514, 2606
SseBI	AGGCCT	1 cut(s)	2843
SsiI	CCGC	4 cut(s)	126, 220, 1190, 2365
SspMI	CTAG	8 cut(s)	258, 357, 402, 581, 968, 1242, 1446, 2637
SstI	GAGCTC	3 cut(s)	51, 1249, 2694
StuI	AGGCCT	1 cut(s)	2843
StyD4I	CCNGG	9 cut(s)	234, 1432, 1456, 1467, 1552, 1836, 2312, 2415, 2807
StyI	CCWWGG	3 cut(s)	1368, 1427, 2785
TaiI	ACGT	2 cut(s)	1753, 2837
TaqI	TCGA	8 cut(s)	557, 733, 1522, 1644, 1777, 1806, 2666, 3147
TaqII	GACCGA	1 cut(s)	2270
TasI	AATT	7 cut(s)	340, 568, 1346, 1441, 2448, 2514, 2606
TatI	WGTACW	2 cut(s)	1040, 1735
TfiI	GAWTC	8 cut(s)	58, 68, 97, 410, 463, 1172, 1597, 2024
Tru1I	TTAA	6 cut(s)	566, 1283, 1311, 2309, 2319, 2883
Tru9I	TTAA	6 cut(s)	566, 1283, 1311, 2309, 2319, 2883
TseFI	GTSAC	4 cut(s)	62, 128, 2293, 2830
TseI	GCWGC	6 cut(s)	526, 1516, 2153, 2672, 3176, 3179
Tsp45I	GTSAC	4 cut(s)	62, 128, 2293, 2830
TspGWI	ACGGA	3 cut(s)	309, 698, 717
Tth111I	GACNNNGTC	1 cut(s)	2466
Van91I	CCANNNNNTGG	3 cut(s)	1433, 1715, 2999
VpaK11BI	GGWCC	3 cut(s)	1705, 1841, 2091
XagI	CCTNNNNNAGG	1 cut(s)	1398
XapI	RAATTY	4 cut(s)	568, 1346, 2448, 2606
XbaI	TCTAGA	2 cut(s)	401, 967
XceI	RCATGY	3 cut(s)	2228, 2330, 2359
XcmI	CCANNNNNNNNNTGG	3 cut(s)	16, 1102, 2044
XmnI	GAANNNNTTC	1 cut(s)	335
XspI	CTAG	8 cut(s)	258, 357, 402, 581, 968, 1242, 1446, 2637
Zsp2I	ATGCAT	3 cut(s)	865, 1594, 2328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.