Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006442

Physical Location & Seq

Genomic Coordinates Reverse (-)

58574932 .. 58581245

Gene Structure 6314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G034040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3222 bp

ATGGAGGCCAATGCCGGAATGGTGGCCGGCTCTTACAAGAGGAACGAGCTCGTTCGGATCCGTCACGATTCCGATAGCTCAGCGAAGCCCTTGAAGAATCTGAACGGCCAGATATGTCAGATCTGTGGTGACACTGTCGGACTTACAGCTACTGGCGATGTCTTTGTTGCCTGTAATGAGTGTGCCTTCCCAGTGTGTCGGCCTTGCTATGAGTATGAGCGAAAAGATGGGAACCAGGCTTGTCCGCAATGCAAGACTAGATATAAAAGGCACAAAGGGAGTCCTCGCGTGGACGGAGATGAGGATGAGGATGATATTGATGATCTTGAGAATGAGTTCAATTATGCACAAGGAACTAGCAATGCAAGACGCCAATGGCAAGGAGATGATCCTGACCTCTCATCTTCCTCTAGACATGAATCTGGACAGCCAATTCCCCTTCTCACAAATGGACAATCAGTGTCTGGTGAGATACCCTGTGCTACTCCTGACAACCAATCTGTGCGAACTACATCAGGTCCTTTGGATCCACGGCAGCCAGTTCCCGTGAGAATAGTTGATCCTTCAAAGGACTTGAATTCCTATGGGCTAGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGATGGAAACTCAAACAGGACAAAAATATGATGCAGATGACCAGTAGATACCCTGAAGGAAAGGGGGACATGGAAGGCACTGGTTCAAACGGAGAAGAACTCCAAATGGCTGATGATGCTCGACAACCTTTGAGTCGTATTGTTCCTATCTCTTCATCTCATCTGACACCTTATCGTGTTGTGATCATACTTCGGCTTATCATTCTGGGTTTCTTTTTGCAATACCGTGCAACTCACCCAGTGAAAGATGCATATCCATTATGGCTAATATCAGTTATCTGTGAGATTTGGTTTGCTTTTTCATGGCTTCTGGATCAGTTTCCAAAATGGTTTCCCATAAATCGTGAGACCTATCTTGACAGGCTCGCACTGAGGTATGATCGTGATGGGGAACCATCTCAGTTAGCTCCAGTAGATGTGTTTGTGAGTACAGTGGATCCCATGAAAGAACCTCCTCTGGTTACAGCCAACACAGTTTTGTCCATACTTTCTGTGGATTACCCTGTGGACAAAATCTCTTGCTATGTGTCAGATGATGGATCTGCAATGCTGACATTTGAAGCCCTTTCTGAAACTGCGGAGTTTGCTAGAAAGTGGGTGCCTTTCTGCAAGAAACACAACATTGAGCCTAGAGCTCCTGAGTTTTATTTTGCTCAAAAGATTGATTACTTAAAAGACAAGATACAGCCTTCTTTTGTAAAAGAGCGCAGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTAAGGATTAATGCCTTAGTTGCCAAGGCACAGAAGATGCCTGAAGAAGGTTGGACAATGCAGGATGGGACTCCATGGCCTGGGAACAATTCTAGGGATCATCCAGGAATGATCCAGGTCTTCTTAGGCCACAGTGGCGGCCTTGATACAGATGGCAATGAGCTGCCTCGACTTGTTTATGTTTCTCGTGAGAAGAGACCTGGCTTCCAGCATCACAAAAAAGCTGGAGCAATGAATGCATTGATTCGAGTTTCAGCTGTCCTGACAAATGGTGCATATCTTTTGAACGTCGATTGTGATCACTACTTCAATAACAGTAAAGCTGTTAAGGAAGCAATGTGTTTCATGATGGACCCAGCTTATGGGAAGAAGACCTGCTATGTACAGTTCCCACAACGTTTCGATGGGATTGACATGCATGATCGATATGCCAATCGTAACATTGTCTTCTTTGATGTAGATCAACTGAAAGGGTTGGATGGCATCCAGGGTCCAGTCTATGTGGGAACTGGTTGCTGTTTCAACAGGCAAGCACTATATGGGTATGATCCTGTTTTGACTGAGGAAGATTTGGAACCAAACATCATATTCAAGAGTTGTTGTGGTTCAAGAAAGAAGGGAAAGACCAGCAATAAGAAGTATATTGACAAGAAGAGGGCTGTCAAAAGAACTGAATCGACCATTCCCATTTTCAATATGGAAGACATTGAGGAGGGTGTTGAAGGTTATGATGATGAGAGGTCCCTTCTTATGTCTCAAAAGAACTTAGAGAAGCGTTTTGGTCAATCTCCAGTTTTTATTGCAGCCACCTTCATGGAACAAGGGGGCATTCCACCTACAACAAACCCTGCAACTCTGTTGAAGGAAGCCATACATGTTATAAGCTGTGGGTATGAAGACAAGACCGAATGGGGAAAAGAGATCGGATGGATCTATGGTTCTGTGACTGAAGATATTTTAACCGGGTTTAAGATGCATGCTCGTGGTTGGATATCAGTCTATTGCATGCCTCCCCGTCCAGCATTTAAGGGGTCTGCTCCCATCAATCTTTCTGATCGTTTGAACCAGGTGCTTCGGTGGGCCTTGGGATCTATTGAAATCTTGCTCAGCAGGCATTGTCCCATATGGTATGGCTACAATGGGAGAATGAAGCTTCTGGAGAGAATTGCATACATCAATACCATTGTTTATCCCCTCACATCTATACCACTGATTGCATACTGTATGCTTCCTGCGTTTTGCCTTCTCACAAATAAGTTCATCATTCCTGAGATAAGCAACTTCGCTAGCATGTGGTTTATTCTTCTCTTTGTTTCGATTGCCGCAACTGGAGTTCTTGAGCTTAGGTGGAGTGGAGTCGGCATTGATGACTGGTGGAGAAACGAACAGTTCTGGGTCATTGGTGGGACATCTGCTCATCTTTTCGCTGTCTTCCAAGGTCTCCTAAAAGTTCTTGCTGGGATTGACACCAACTTCACTGTCACATCAAAGGCCTCTGATGAGGATGGGGATTTTGCAGAGCTTTATGTGTTCAAGTGGACAGCACTTCTCATTCCTCCCACCACAGTTCTCATTGTGAACTTGGTAGGTATCGTGGCTGGTGTTTCATATGCCATAAACAGTGGGTACCAATCTTGGGGGCCACTTTTTGGCAAACTGTTTTTCGCCATGTGGGTCGTTGCCCATCTATACCCATTCTTGAAGGGTCTGTTGGGTCGCCAAAATCGTACCCCTACGATCGTCATTGTATGGTCTATCCTCCTTGCTTCGATATTTTCCTTGCTATGGGTGCGCATCGACCCATTCACATCAGACGCTTCAAAAGCTGCATCAAAAGGTCAATGTGGCGTCAATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009628 GO:0009651 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042538 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1073

Amino Acids

120.88

Weight (kDa)

6.25

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	29 - 105	4.1e-45	Zinc-binding RING-finger
Cellulose_synt	PF03552	345 - 1064	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	761 - 868	6.5e-08	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32410
fragaria_vesca	FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420
malus_domestica	MD08G1147200.v1.1 MD15G1123200.v1.1
prunus_persica	Prupe.1G478600_v2.0.a1 Prupe.1G478600_v2.0.a1
pyrus_communis	pycom08g12420 pycom15g11100
rosa_chinensis	RchiOBHm_Chr6g0298221
rosa_laevigata	RLG00000011525
rosa_multiflora	Rmu_sc0017507.1_g000003
rosa_roxburghii	Rroxscaffold_7G00169850
rosa_rugosa	Rorug06G0279600 Rorug06G0279600
rosa_samantha	Rh6AG389900 Rh6BG398300 Rh6CG404200 Rh6DG390900
rosa_wichuraiana	Rw6G034040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2243
Acc16I	TGCGCA	1 cut(s)	3155
Acc36I	ACCTGC	1 cut(s)	1745
Acc65I	GGTACC	1 cut(s)	2988
AccB1I	GGYRCC	2 cut(s)	1219, 2988
AccB7I	CCANNNNNTGG	3 cut(s)	1442, 1724, 3011
AccII	CGCG	1 cut(s)	288
AciI	CCGC	4 cut(s)	245, 1199, 1500, 2685
AclI	AACGTT	1 cut(s)	1759
AcoI	YGGCCR	2 cut(s)	24, 106
AcsI	RAATTY	2 cut(s)	577, 1355
AcuI	CTGAAG	3 cut(s)	696, 1425, 2331
AcyI	GRCGYC	2 cut(s)	370, 3210
AdeI	CACNNNGTG	1 cut(s)	862
AfaI	GTAC	4 cut(s)	1051, 1746, 2990, 3091
AfiI	CCNNNNNNNGG	6 cut(s)	1409, 1442, 1724, 2998, 3011, 3147
AflIII	ACRYGT	1 cut(s)	2236
AjnI	CCWGG	7 cut(s)	234, 1441, 1465, 1476, 1561, 1848, 2427
AjuI	GAANNNNNNNTTGG	2 cut(s)	3056, 3088
AloI	GAACNNNNNNTCC	2 cut(s)	2284, 2316
Alw21I	GWGCWC	2 cut(s)	51, 1258
Alw26I	GTCTC	4 cut(s)	962, 1552, 2121, 2807
AlwNI	CAGNNNCTG	2 cut(s)	152, 464
ApeKI	GCWGC	4 cut(s)	535, 1525, 2165, 3188
ApoI	RAATTY	2 cut(s)	577, 1355
AseI	ATTAAT	1 cut(s)	1371
Asp700I	GAANNNNTTC	1 cut(s)	335
Asp718I	GGTACC	1 cut(s)	2988
AspLEI	GCGC	2 cut(s)	1329, 3156
AspS9I	GGNCC	6 cut(s)	518, 1714, 1853, 2103, 2442, 3002
AsuC2I	CCSGG	1 cut(s)	2326
AsuHPI	GGTGA	3 cut(s)	140, 479, 848
AsuNHI	GCTAGC	1 cut(s)	2648
AvaII	GGWCC	4 cut(s)	518, 1714, 1853, 2103
BamHI	GGATCC	3 cut(s)	57, 526, 1057
BanI	GGYRCC	2 cut(s)	1219, 2988
BanII	GRGCYC	2 cut(s)	51, 1258
BauI	CACGAG	2 cut(s)	1548, 2343
BbsI	GAAGAC	6 cut(s)	1474, 1739, 1801, 2070, 2265, 2785
Bbv12I	GWGCWC	2 cut(s)	51, 1258
BbvI	GCAGC	4 cut(s)	547, 1512, 2177, 3175
BceAI	ACGGC	2 cut(s)	121, 548
BciT130I	CCWGG	7 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2429
BclI	TGATCA	2 cut(s)	804, 1660
BcnI	CCSGG	1 cut(s)	2326
BcoDI	GTCTC	4 cut(s)	962, 1552, 2121, 2807
BfaI	CTAG	8 cut(s)	258, 357, 411, 590, 1209, 1251, 1455, 2649
BfuAI	ACCTGC	1 cut(s)	1745
BglI	GCCNNNNNGGC	1 cut(s)	1497
BglII	AGATCT	1 cut(s)	120
BisI	GCNGC	6 cut(s)	536, 1501, 1526, 2166, 2685, 3189
BlpI	GCTNAGC	2 cut(s)	79, 2468
BlsI	GCNGC	6 cut(s)	537, 1502, 1527, 2167, 2686, 3190
Bme1390I	CCNGG	8 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2326, 2429
Bme18I	GGWCC	4 cut(s)	518, 1714, 1853, 2103
BmgT120I	GGNCC	6 cut(s)	518, 1714, 1853, 2103, 2442, 3002
BmrFI	CCNGG	8 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2326, 2429
BmrI	ACTGGG	2 cut(s)	185, 854
BmsI	GCATC	9 cut(s)	642, 727, 859, 1389, 1582, 1854, 2325, 3165, 3200
BmtI	GCTAGC	1 cut(s)	2652
BmuI	ACTGGG	2 cut(s)	185, 854
BpiI	GAAGAC	6 cut(s)	1474, 1739, 1801, 2070, 2265, 2785
BplI	GAGNNNNNCTC	2 cut(s)	705, 737
BpmI	CTGGAG	5 cut(s)	1014, 1608, 2136, 2540, 2712
Bpu10I	CCTNAGC	1 cut(s)	2705
Bpu1102I	GCTNAGC	2 cut(s)	79, 2468
BpuEI	CTTGAG	2 cut(s)	347, 2720
BpuMI	CCSGG	1 cut(s)	2326
Bsa29I	ATCGAT	1 cut(s)	1786
BsaBI	GATNNNNATC	3 cut(s)	873, 1659, 1821
BsaHI	GRCGYC	2 cut(s)	370, 3210
BsaI	GGTCTC	3 cut(s)	962, 1552, 2807
BsaJI	CCNNGG	7 cut(s)	530, 1386, 1436, 1442, 1849, 2445, 2797
Bsc4I	CCNNNNNNNGG	6 cut(s)	1409, 1442, 1724, 2998, 3011, 3147
Bse118I	RCCGGY	1 cut(s)	26
Bse3DI	GCAATG	7 cut(s)	254, 367, 1173, 1341, 1525, 1599, 1704
Bse8I	GATNNNNATC	3 cut(s)	873, 1659, 1821
BseBI	CCWGG	7 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2429
BseCI	ATCGAT	1 cut(s)	1786
BseDI	CCNNGG	7 cut(s)	530, 1386, 1436, 1442, 1849, 2445, 2797
BseGI	GGATG	9 cut(s)	310, 316, 629, 1432, 1462, 1845, 1846, 2294, 2872
BseJI	GATNNNNATC	3 cut(s)	873, 1659, 1821
BseLI	CCNNNNNNNGG	6 cut(s)	1409, 1442, 1724, 2998, 3011, 3147
BseMI	GCAATG	7 cut(s)	254, 367, 1173, 1341, 1525, 1599, 1704
BseMII	CTCAG	7 cut(s)	93, 983, 1034, 1251, 1914, 2482, 2622
BseRI	GAGGAG	2 cut(s)	1065, 2087
BseXI	GCAGC	4 cut(s)	547, 1512, 2177, 3175
BseYI	CCCAGC	2 cut(s)	1717, 2819
Bsh1236I	CGCG	1 cut(s)	288
Bsh1285I	CGRYCG	1 cut(s)	3102
BshNI	GGYRCC	2 cut(s)	1219, 2988
BshVI	ATCGAT	1 cut(s)	1786
BsiEI	CGRYCG	1 cut(s)	3102
BsiHKAI	GWGCWC	2 cut(s)	51, 1258
BsiSI	CCGG	3 cut(s)	15, 27, 2325
BslFI	GGGAC	5 cut(s)	701, 1444, 2089, 2466, 2782
BslI	CCNNNNNNNGG	6 cut(s)	1409, 1442, 1724, 2998, 3011, 3147
BsmAI	GTCTC	4 cut(s)	962, 1552, 2121, 2807
BsmFI	GGGAC	5 cut(s)	701, 1444, 2089, 2466, 2782
BsmI	GAATGC	2 cut(s)	1603, 2190
Bso31I	GGTCTC	3 cut(s)	962, 1552, 2807
Bsp1286I	GDGCHC	2 cut(s)	51, 1258
Bsp1407I	TGTACA	1 cut(s)	1744
Bsp1720I	GCTNAGC	2 cut(s)	79, 2468
Bsp19I	CCATGG	1 cut(s)	1436
BspACI	CCGC	4 cut(s)	245, 1199, 1500, 2685
BspCNI	CTCAG	7 cut(s)	92, 984, 1033, 1252, 1915, 2481, 2623
BspDI	ATCGAT	1 cut(s)	1786
BspFNI	CGCG	1 cut(s)	288
BspHI	TCATGA	1 cut(s)	1707
BspMI	ACCTGC	1 cut(s)	1745
BspOI	GCTAGC	1 cut(s)	2652
BspT107I	GGYRCC	2 cut(s)	1219, 2988
BspTNI	GGTCTC	3 cut(s)	962, 1552, 2807
BsrDI	GCAATG	7 cut(s)	254, 367, 1173, 1341, 1525, 1599, 1704
BsrFI	RCCGGY	1 cut(s)	26
BsrGI	TGTACA	1 cut(s)	1744
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	7 cut(s)	530, 1386, 1436, 1442, 1849, 2445, 2797
BssNI	GRCGYC	2 cut(s)	370, 3210
BssSI	CACGAG	2 cut(s)	1548, 2343
BssT1I	CCWWGG	4 cut(s)	1386, 1436, 2445, 2797
Bst2BI	CACGAG	2 cut(s)	1548, 2343
Bst2UI	CCWGG	7 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2429
Bst6I	CTCTTC	4 cut(s)	778, 1334, 1550, 2009
BstACI	GRCGYC	2 cut(s)	370, 3210
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstAUI	TGTACA	1 cut(s)	1744
BstC8I	GCNNGC	7 cut(s)	28, 987, 1893, 2340, 2369, 2474, 2650
BstDSI	CCRYGG	2 cut(s)	530, 1436
BstENI	CCTNNNNNAGG	1 cut(s)	1407
BstF5I	GGATG	9 cut(s)	310, 316, 629, 1432, 1462, 1845, 1846, 2294, 2872
BstFNI	CGCG	1 cut(s)	288
BstHHI	GCGC	2 cut(s)	1329, 3156
BstMAI	GTCTC	4 cut(s)	962, 1552, 2121, 2807
BstMCI	CGRYCG	1 cut(s)	3102
BstMWI	GCNNNNNNNGC	8 cut(s)	737, 1205, 1382, 1497, 1598, 2473, 3151, 3185
BstNI	CCWGG	7 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2429
BstNSI	RCATGY	5 cut(s)	1780, 2240, 2342, 2371, 2656
BstSCI	CCNGG	8 cut(s)	234, 1441, 1465, 1476, 1561, 1848, 2324, 2427
BstUI	CGCG	1 cut(s)	288
BstV1I	GCAGC	4 cut(s)	547, 1512, 2177, 3175
BstV2I	GAAGAC	6 cut(s)	1474, 1739, 1801, 2070, 2265, 2785
BstX2I	RGATCY	7 cut(s)	57, 120, 526, 1057, 1160, 2292, 2450
BstXI	CCANNNNNNTGG	1 cut(s)	2176
BstYI	RGATCY	7 cut(s)	57, 120, 526, 1057, 1160, 2292, 2450
Bsu15I	ATCGAT	1 cut(s)	1786
BsuTUI	ATCGAT	1 cut(s)	1786
BtgI	CCRYGG	2 cut(s)	530, 1436
BtgZI	GCGATG	1 cut(s)	171
BtsCI	GGATG	9 cut(s)	310, 316, 629, 1432, 1462, 1845, 1846, 2294, 2872
BveI	ACCTGC	1 cut(s)	1745
Cac8I	GCNNGC	7 cut(s)	28, 987, 1893, 2340, 2369, 2474, 2650
CaiI	CAGNNNCTG	2 cut(s)	152, 464
CciI	TCATGA	1 cut(s)	1707
CfoI	GCGC	2 cut(s)	1329, 3156
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	6 cut(s)	518, 1714, 1853, 2103, 2442, 3002
ClaI	ATCGAT	1 cut(s)	1786
CseI	GACGC	3 cut(s)	378, 3185, 3199
CsiI	ACCWGGT	1 cut(s)	2427
Csp6I	GTAC	4 cut(s)	1050, 1745, 2989, 3090
CviQI	GTAC	4 cut(s)	1050, 1745, 2989, 3090
DraIII	CACNNNGTG	1 cut(s)	862
EaeI	YGGCCR	2 cut(s)	24, 106
Eam1104I	CTCTTC	4 cut(s)	778, 1334, 1550, 2009
EarI	CTCTTC	4 cut(s)	778, 1334, 1550, 2009
Ecl136II	GAGCTC	2 cut(s)	49, 1256
Eco130I	CCWWGG	4 cut(s)	1386, 1436, 2445, 2797
Eco147I	AGGCCT	1 cut(s)	2855
Eco24I	GRGCYC	2 cut(s)	51, 1258
Eco31I	GGTCTC	3 cut(s)	962, 1552, 2807
Eco32I	GATATC	1 cut(s)	2355
Eco47I	GGWCC	4 cut(s)	518, 1714, 1853, 2103
Eco53kI	GAGCTC	2 cut(s)	49, 1256
Eco57I	CTGAAG	3 cut(s)	696, 1425, 2331
EcoICRI	GAGCTC	2 cut(s)	49, 1256
EcoNI	CCTNNNNNAGG	1 cut(s)	1407
EcoO109I	RGGNCCY	2 cut(s)	518, 2103
EcoRI	GAATTC	2 cut(s)	577, 1355
EcoRII	CCWGG	7 cut(s)	234, 1441, 1465, 1476, 1561, 1848, 2427
EcoRV	GATATC	1 cut(s)	2355
EcoT14I	CCWWGG	4 cut(s)	1386, 1436, 2445, 2797
EcoT22I	ATGCAT	4 cut(s)	874, 1603, 1782, 2340
EcoT38I	GRGCYC	2 cut(s)	51, 1258
ErhI	CCWWGG	4 cut(s)	1386, 1436, 2445, 2797
FaqI	GGGAC	5 cut(s)	701, 1444, 2089, 2466, 2782
FauNDI	CATATG	2 cut(s)	2486, 2971
FbaI	TGATCA	2 cut(s)	804, 1660
Fnu4HI	GCNGC	6 cut(s)	536, 1501, 1526, 2166, 2685, 3189
FokI	GGATG	9 cut(s)	317, 323, 636, 1439, 1449, 1832, 1853, 2301, 2879
FriOI	GRGCYC	2 cut(s)	51, 1258
Fsp4HI	GCNGC	6 cut(s)	536, 1501, 1526, 2166, 2685, 3189
FspAI	RTGCGCAY	1 cut(s)	3155
FspBI	CTAG	8 cut(s)	258, 357, 411, 590, 1209, 1251, 1455, 2649
FspI	TGCGCA	1 cut(s)	3155
GlaI	GCGC	2 cut(s)	1328, 3155
GluI	GCNGC	6 cut(s)	536, 1501, 1526, 2166, 2685, 3189
GsaI	CCCAGC	2 cut(s)	1721, 2823
GsuI	CTGGAG	5 cut(s)	1014, 1608, 2136, 2540, 2712
HapII	CCGG	3 cut(s)	15, 27, 2325
HgaI	GACGC	3 cut(s)	378, 3185, 3199
HhaI	GCGC	2 cut(s)	1329, 3156
Hin1I	GRCGYC	2 cut(s)	370, 3210
Hin6I	GCGC	2 cut(s)	1327, 3154
HinP1I	GCGC	2 cut(s)	1327, 3154
HincII	GTYRAC	1 cut(s)	601
HindII	GTYRAC	1 cut(s)	601
HindIII	AAGCTT	1 cut(s)	2513
HinfI	GANTC	9 cut(s)	68, 97, 280, 419, 754, 1432, 1606, 2036, 2718
HpaII	CCGG	3 cut(s)	15, 27, 2325
HphI	GGTGA	3 cut(s)	140, 479, 848
Hpy166II	GTNNAC	5 cut(s)	292, 601, 1129, 2901, 2941
Hpy8I	GTNNAC	5 cut(s)	292, 601, 1129, 2901, 2941
Hpy99I	CGWCG	1 cut(s)	1655
HpyCH4IV	ACGT	2 cut(s)	1650, 1759
HpyF10VI	GCNNNNNNNGC	8 cut(s)	737, 1205, 1382, 1497, 1598, 2473, 3151, 3185
HpySE526I	ACGT	2 cut(s)	1650, 1759
Hsp92I	GRCGYC	2 cut(s)	370, 3210
HspAI	GCGC	2 cut(s)	1327, 3154
KpnI	GGTACC	1 cut(s)	2992
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Ksp22I	TGATCA	2 cut(s)	804, 1660
LmnI	GCTCC	4 cut(s)	1033, 1261, 1589, 2404
Lsp1109I	GCAGC	4 cut(s)	547, 1512, 2177, 3175
LweI	GCATC	9 cut(s)	642, 727, 859, 1389, 1582, 1854, 2325, 3165, 3200
MabI	ACCWGGT	1 cut(s)	2427
MaeI	CTAG	8 cut(s)	258, 357, 411, 590, 1209, 1251, 1455, 2649
MaeII	ACGT	2 cut(s)	1650, 1759
MaeIII	GTNAC	6 cut(s)	62, 128, 1081, 1799, 2305, 2842
MfeI	CAATTG	1 cut(s)	3214
MflI	RGATCY	7 cut(s)	57, 120, 526, 1057, 1160, 2292, 2450
MhlI	GDGCHC	2 cut(s)	51, 1258
MluCI	AATT	7 cut(s)	340, 432, 577, 1355, 1450, 2526, 3214
MlyI	GAGTC	4 cut(s)	289, 763, 1426, 2727
MmeI	TCCRAC	4 cut(s)	118, 1394, 1818, 2330
Mph1103I	ATGCAT	4 cut(s)	874, 1603, 1782, 2340
MroNI	GCCGGC	1 cut(s)	26
MroXI	GAANNNNTTC	1 cut(s)	335
MseI	TTAA	6 cut(s)	1292, 1371, 1689, 2321, 2331, 2388
MslI	CAYNNNNRTG	2 cut(s)	2174, 2343
MspA1I	CMGCKG	1 cut(s)	1619
MspI	CCGG	3 cut(s)	15, 27, 2325
MspR9I	CCNGG	8 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2326, 2429
MunI	CAATTG	1 cut(s)	3214
Mva1269I	GAATGC	2 cut(s)	1603, 2190
MvaI	CCWGG	7 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2429
MvnI	CGCG	1 cut(s)	288
MwoI	GCNNNNNNNGC	8 cut(s)	737, 1205, 1382, 1497, 1598, 2473, 3151, 3185
NaeI	GCCGGC	1 cut(s)	28
NciI	CCSGG	1 cut(s)	2326
NcoI	CCATGG	1 cut(s)	1436
NdeI	CATATG	2 cut(s)	2486, 2971
NgoMIV	GCCGGC	1 cut(s)	26
NheI	GCTAGC	1 cut(s)	2648
NmuCI	GTSAC	4 cut(s)	62, 128, 2305, 2842
NsbI	TGCGCA	1 cut(s)	3155
NsiI	ATGCAT	4 cut(s)	874, 1603, 1782, 2340
NspI	RCATGY	5 cut(s)	1780, 2240, 2342, 2371, 2656
PaeI	GCATGC	2 cut(s)	2342, 2371
PagI	TCATGA	1 cut(s)	1707
PceI	AGGCCT	1 cut(s)	2855
PciI	ACATGT	1 cut(s)	2236
PcsI	WCGNNNNNNNCGW	1 cut(s)	3085
PctI	GAATGC	2 cut(s)	1603, 2190
PdiI	GCCGGC	1 cut(s)	28
PdmI	GAANNNNTTC	1 cut(s)	335
PfeI	GAWTC	5 cut(s)	68, 97, 419, 1606, 2036
PflFI	GACNNNGTC	1 cut(s)	134
PflMI	CCANNNNNTGG	3 cut(s)	1442, 1724, 3011
PfoI	TCCNGGA	1 cut(s)	1465
PkrI	GCNGC	6 cut(s)	537, 1502, 1527, 2167, 2686, 3190
Ple19I	CGATCG	1 cut(s)	3102
PleI	GAGTC	4 cut(s)	288, 762, 1426, 2726
PpsI	GAGTC	4 cut(s)	288, 762, 1426, 2726
PpuMI	RGGWCCY	2 cut(s)	518, 2103
PscI	ACATGT	1 cut(s)	2236
PshBI	ATTAAT	1 cut(s)	1371
PsiI	TTATAA	1 cut(s)	2243
Psp124BI	GAGCTC	2 cut(s)	51, 1258
Psp1406I	AACGTT	1 cut(s)	1759
Psp5II	RGGWCCY	2 cut(s)	518, 2103
Psp6I	CCWGG	7 cut(s)	234, 1441, 1465, 1476, 1561, 1848, 2427
PspFI	CCCAGC	2 cut(s)	1717, 2819
PspGI	CCWGG	7 cut(s)	234, 1441, 1465, 1476, 1561, 1848, 2427
PspPI	GGNCC	6 cut(s)	518, 1714, 1853, 2103, 2442, 3002
PspPPI	RGGWCCY	2 cut(s)	518, 2103
PstNI	CAGNNNCTG	2 cut(s)	152, 464
PsuI	RGATCY	7 cut(s)	57, 120, 526, 1057, 1160, 2292, 2450
PsyI	GACNNNGTC	1 cut(s)	134
PvuI	CGATCG	1 cut(s)	3102
PvuII	CAGCTG	1 cut(s)	1619
RsaI	GTAC	4 cut(s)	1051, 1746, 2990, 3091
RsaNI	GTAC	4 cut(s)	1050, 1745, 2989, 3090
RseI	CAYNNNNRTG	2 cut(s)	2174, 2343
SacI	GAGCTC	2 cut(s)	51, 1258
SaqAI	TTAA	6 cut(s)	1292, 1371, 1689, 2321, 2331, 2388
SatI	GCNGC	6 cut(s)	536, 1501, 1526, 2166, 2685, 3189
Sau96I	GGNCC	6 cut(s)	518, 1714, 1853, 2103, 2442, 3002
SchI	GAGTC	4 cut(s)	289, 763, 1426, 2727
ScrFI	CCNGG	8 cut(s)	236, 1443, 1467, 1478, 1563, 1850, 2326, 2429
SduI	GDGCHC	2 cut(s)	51, 1258
SexAI	ACCWGGT	1 cut(s)	2427
SfaNI	GCATC	9 cut(s)	642, 727, 859, 1389, 1582, 1854, 2325, 3165, 3200
SinI	GGWCC	4 cut(s)	518, 1714, 1853, 2103
SmiMI	CAYNNNNRTG	2 cut(s)	2174, 2343
SmlI	CTYRAG	2 cut(s)	326, 2699
SmoI	CTYRAG	2 cut(s)	326, 2699
SphI	GCATGC	2 cut(s)	2342, 2371
Sse9I	AATT	7 cut(s)	340, 432, 577, 1355, 1450, 2526, 3214
SseBI	AGGCCT	1 cut(s)	2855
SsiI	CCGC	4 cut(s)	245, 1199, 1500, 2685
SspMI	CTAG	8 cut(s)	258, 357, 411, 590, 1209, 1251, 1455, 2649
SstI	GAGCTC	2 cut(s)	51, 1258
StuI	AGGCCT	1 cut(s)	2855
StyD4I	CCNGG	8 cut(s)	234, 1441, 1465, 1476, 1561, 1848, 2324, 2427
StyI	CCWWGG	4 cut(s)	1386, 1436, 2445, 2797
TaiI	ACGT	2 cut(s)	1653, 1762
TaqII	GACCGA	1 cut(s)	2282
TasI	AATT	7 cut(s)	340, 432, 577, 1355, 1450, 2526, 3214
TatI	WGTACW	2 cut(s)	1049, 1744
TauI	GCSGC	2 cut(s)	1503, 2687
TfiI	GAWTC	5 cut(s)	68, 97, 419, 1606, 2036
Tru1I	TTAA	6 cut(s)	1292, 1371, 1689, 2321, 2331, 2388
Tru9I	TTAA	6 cut(s)	1292, 1371, 1689, 2321, 2331, 2388
TseFI	GTSAC	4 cut(s)	62, 128, 2305, 2842
TseI	GCWGC	4 cut(s)	535, 1525, 2165, 3188
Tsp45I	GTSAC	4 cut(s)	62, 128, 2305, 2842
TspGWI	ACGGA	3 cut(s)	50, 309, 726
Tth111I	GACNNNGTC	1 cut(s)	134
Van91I	CCANNNNNTGG	3 cut(s)	1442, 1724, 3011
VpaK11BI	GGWCC	4 cut(s)	518, 1714, 1853, 2103
VspI	ATTAAT	1 cut(s)	1371
XagI	CCTNNNNNAGG	1 cut(s)	1407
XapI	RAATTY	2 cut(s)	577, 1355
XbaI	TCTAGA	1 cut(s)	410
XceI	RCATGY	5 cut(s)	1780, 2240, 2342, 2371, 2656
XcmI	CCANNNNNNNNNTGG	3 cut(s)	16, 1111, 2056
XmnI	GAANNNNTTC	1 cut(s)	335
XspI	CTAG	8 cut(s)	258, 357, 411, 590, 1209, 1251, 1455, 2649
Zsp2I	ATGCAT	4 cut(s)	874, 1603, 1782, 2340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.