Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006442

Physical Location & Seq

Genomic Coordinates Forward (+)

40043878 .. 40051091

Gene Structure 7214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G478600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3219 bp

ATGGAAGCCAATGCTGGACTGGTGGCTGGCTCTTACAAGAGAAACGAACTCGTTCGGATTCGTCACGATTCAGATAGCGCGCCCAAACCCTTAAAAAATCTGAACGGGCAGATATGTCAGATATGTGGTGATACTGTTGGACTCACGGCCACTGGTGATGTCTTTGTTGCCTGTAATGAGTGTGCCTTTCCAGTTTGTCGTCCTTGTTATGAGTATGAGCGGAAAGATGGGAACCAGTCTTGCCCACAGTGCAAGACTAGATACAAAAGGCACAAAGGGAGTCCTCGAGTGGACGGAGATGATGATGAGGATGATATTGATGATCTGGAGAATGAGTTCAATTACGCACAAGGAAATAGCAATGCCAGACGCCAGTGGCAAGGAGAAGACGCCGACCTCTCATCTTCCTCTAGACATGAATCTCAACAGCCAATTCCCCTTCTAACCAATGGGCAGCCGATGTCTGGCGAGATTCCATGTGCAACACCTGACAACCAATCTGTGCGAACTACATCAGGTCCTTTGGATCCAAGACAGCCAGTTCCAGTAAGAATAGTGGACCCGTCAAAGGACTTGAATTCTTATGGGCTAGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGCTGGAAACTCAAACAGGACAAAAATATGATGCAGATGACTAGTAGATACGCTGAAGGAAAGGGTGACAATGAAGGCACTGGTTCAAATGGAGAAGAACTCCAAATGGCTGATGATGCCAGGCAACCTTTAAGTCGTATCGTGCCTATTTCTTCATCTCATCTGACACCTTATCGTGTTGTGATCATACTCCGGCTTATTATTCTGGGTTTCTTCTTGCAATATCGTGCAACTCACCCAGTGAAAGATGCATACCCATTATGGTTAACATCAGTTATCTGTGAGATTTGGTTTGCTTTATCCTGGCTTCTGGATCAGTTTCCAAAATGGTTTCCCATTAATCGTGAGACCTATCTGGACAGGCTCACATTGAGGTATGATCGTGAAGGGGAACCATCCCAGCTAGCTCCTATAGATGTATTTGTTAGTACAGTGGATCCCATGAAAGAGCCTCCTCTGGTTACGGCTAACACTGTTTTATCCATACTTTCTGTGGATTATCCTGTGGACAAAGTGTCTTGCTATGTGTCTGATGATGGGTCAGCAATGCTAACATTTGAATCCCTTTCTGAAACTGCGGAGTTTGCTAGGAAGTGGGTGCCTTTTTGCAAGAAACACAACATTGAACCTAGAGCCCCTGAATTTTATTTTGCCCAAAAGATTGATTACTTAAAGGACAAGATACAACCTTCTTTTGTAAAAGAGCGTAGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTACGGATCAATGCCTTAGTTGCCAAGGCACAGAAGATGCCTGAAGAAGGTTGGACAATGCAGGATGGGACTCCATGGCCTGGGAACAATCCTAGGGACCATCCAGGAATGATCCAGGTCTTCTTAGGCCACAGTGGGGGCCTTGATACTGATGGAAATGAGCTGCCTCGACTTGTTTATGTTTCTCGTGAGAAGCGACCTGGCTTCCAGCATCACAAGAAAGCTGGAGCAATGAATGCACTGATTCGAGTTTCAGCTGTCCTGACAAATGGTGCATATCTTTTGAATGTCGATTGTGATCACTACTTCAATAACAGTAAAGCTCTTAAGGAAGCCATGTGTTTCATGATGGACCCAGCTTATGGGAAGAAGACCTGTTATGTCCAGTTCCCTCAGCGTTTTGATGGCATTGACTTGCACGATCGATATGCCAATCGGAACATTGTCTTCTTCGATATCAACTTGAAAGGGCTGGATGGCATCCAGGGTCCAGTCTATGTGGGAACTGGTTGCTGTTTCAACAGACAAGCTCTATATGGGTATGACCCAGTTTTGACTGAGGAAGATTTACAACCAAACATTATCGTCAAGAGTTGTTGTGGTTCAAGAAAGAAGGGAAAGACTAGCAATAAGAAGTATATTGACAAGAAGAGGGCAGTTAAAAGAACGGAATCCACTATTCCCATTTTTAATATGGAAGACATTGAGGAGGGTGTCGAAGGTTATGATGATGAGAGGACTCTTCTTATGTCCCAGAAGAGCTTAGAGAAGCGCTTTGGTCAATCACCAGTTTTTATTGCAGCCACCTTCATGGAACAAGGAGGCATTCCGCCTACAACCAATCCTGCGACCCTTTTGAAGGAAGCCATACATGTTATTAGCTGTGGATATGAAGACAAGACTGAATGGGGAAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATTTTAACTGGGTTTAAGATGCATGCCCGTGGTTGGATATCAGTCTATTGCATGCCTCCCCGCCCAGCATTTAAGGGTTCTGCTCCCATCAATCTTTCTGATCGTTTGAACCAGGTGCTTCGATGGGCCTTGGGGTCAATTGAAATTTTGCTAAGCAGGCATTGTCCCATATGGTATGGCTACAATGGGAAATTGAAGCTTTTGGAGAGAATAGCATACATCAATACCATTGTTTACCCCCTCACATCTATACCGCTGATTGCGTACTGTTTGCTCCCTGCCTTTTGCCTTCTCACAGAAAAGTTCATTATTCCTGAGATAAGTAACTTTGCTAGCATGTGGTTCATTCTGCTCTTTGTTTCCATTATTGCAACCGGAATTCTTGAGCTTAGGTGGAGTGGAGTCAGTATTGAAGACTGGTGGAGAAACGAACAGTTCTGGATCATTGGTGGCACATCAGCTCATCTCTTTGCTGTCTTTCAAGGTCTCCTAAAAGTTCTTGCTGGGATTGATACCAACTTCACCGTCACATCAAAGGCATCTGATGAGGATGGAGATTTTGCGGAGCTTTACGTGTTCAAATGGACATCGCTTCTCATCCCTCCAACCACAGTTCTTCTTGTGAACATGGTAGGTATTGTAGCCGGTGTTTCATATGCCATAAATAGTGGGTACCAGTCTTGGGGTCCACTCTTTGGCAAACTGTTTTTTGCCCTATGGGTCGTTGCACATCTGTATCCATTCCTGAAGGGTCTTTTGGGTCGGCAAAATCGTACCCCGACAATTGTCATCGTGTGGTCTATTCTTCTTGCTTCAATCTTCTCCCTGCTGTGGGTGCGCATCGACCCGTTCACTAACGACGCAACAAAAGCTGCATCAAATGGTCAATGTGGCGTCAATTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009628 GO:0009651 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042538 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1073

Amino Acids

120.89

Weight (kDa)

6.26

Isoelectric Point (pI)

39.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32410
fragaria_vesca	FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420 FvH4_2g29420
malus_domestica	MD08G1147200.v1.1 MD15G1123200.v1.1
prunus_persica	Prupe.1G478600_v2.0.a1 Prupe.1G478600_v2.0.a1
pyrus_communis	pycom08g12420 pycom15g11100
rosa_chinensis	RchiOBHm_Chr6g0298221
rosa_laevigata	RLG00000011525
rosa_multiflora	Rmu_sc0017507.1_g000003
rosa_roxburghii	Rroxscaffold_7G00169850
rosa_rugosa	Rorug06G0279600 Rorug06G0279600
rosa_samantha	Rh6AG389900 Rh6BG398300 Rh6CG404200 Rh6DG390900
rosa_wichuraiana	Rw6G034040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	3152
Acc65I	GGTACC	1 cut(s)	2985
AccB1I	GGYRCC	2 cut(s)	1219, 2985
AccB7I	CCANNNNNTGG	3 cut(s)	1442, 1724, 3008
AccBSI	CCGCTC	1 cut(s)	220
AccII	CGCG	1 cut(s)	80
AciI	CCGC	6 cut(s)	220, 1199, 2192, 2374, 2567, 2876
AclWI	GGATC	9 cut(s)	521, 534, 942, 1052, 1065, 1376, 1468, 2297, 2762
AcoI	YGGCCR	1 cut(s)	147
AcsI	RAATTY	5 cut(s)	577, 1262, 1355, 2457, 2691
AcuI	CTGAAG	4 cut(s)	696, 1425, 2328, 3080
AcyI	GRCGYC	3 cut(s)	370, 390, 3207
AdeI	CACNNNGTG	1 cut(s)	862
AfaI	GTAC	5 cut(s)	1051, 1365, 2579, 2987, 3088
AfeI	AGCGCT	1 cut(s)	2135
AflII	CTTAAG	1 cut(s)	1688
AflIII	ACRYGT	2 cut(s)	2233, 2886
AhdI	GACNNNNNGTC	1 cut(s)	1135
AhlI	ACTAGT	1 cut(s)	662
AjnI	CCWGG	8 cut(s)	740, 923, 1441, 1465, 1476, 1561, 1845, 2424
AjuI	GAANNNNNNNTTGG	2 cut(s)	3053, 3085
AloI	GAACNNNNNNTCC	4 cut(s)	320, 352, 2281, 2313
Alw26I	GTCTC	2 cut(s)	962, 2804
AlwI	GGATC	9 cut(s)	521, 534, 942, 1052, 1065, 1376, 1468, 2297, 2762
Ama87I	CYCGRG	1 cut(s)	285
Aor51HI	AGCGCT	1 cut(s)	2135
AoxI	GGCC	5 cut(s)	147, 1439, 1489, 1501, 2439
ApeKI	GCWGC	4 cut(s)	454, 1525, 2162, 3185
ApoI	RAATTY	5 cut(s)	577, 1262, 1355, 2457, 2691
AseI	ATTAAT	1 cut(s)	960
Asp700I	GAANNNNTTC	2 cut(s)	51, 335
Asp718I	GGTACC	1 cut(s)	2985
AspA2I	CCTAGG	1 cut(s)	1454
AspLEI	GCGC	4 cut(s)	80, 82, 2136, 3153
AspS9I	GGNCC	8 cut(s)	518, 559, 1459, 1501, 1714, 1850, 2439, 2999
AsuHPI	GGTGA	6 cut(s)	140, 167, 698, 848, 2139, 2827
AsuNHI	GCTAGC	2 cut(s)	1024, 2645
AvaI	CYCGRG	1 cut(s)	285
AvaII	GGWCC	6 cut(s)	518, 559, 1459, 1714, 1850, 2999
AvrII	CCTAGG	1 cut(s)	1454
BaeI	ACNNNNGTAYC	2 cut(s)	3032, 3065
BamHI	GGATCC	2 cut(s)	526, 1057
BanI	GGYRCC	2 cut(s)	1219, 2985
BanII	GRGCYC	1 cut(s)	1258
BauI	CACGAG	1 cut(s)	1548
BbsI	GAAGAC	7 cut(s)	393, 1474, 1739, 1801, 2067, 2262, 2733
BbvCI	CCTCAGC	1 cut(s)	1755
BbvI	GCAGC	4 cut(s)	466, 1512, 2174, 3172
BceAI	ACGGC	2 cut(s)	162, 1101
BcgI	CGANNNNNNTGC	2 cut(s)	1772, 1806
BciT130I	CCWGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
BciVI	GTATCC	1 cut(s)	3060
BclI	TGATCA	2 cut(s)	804, 1660
BcoDI	GTCTC	2 cut(s)	962, 2804
BcuI	ACTAGT	1 cut(s)	662
BfmI	CTRYAG	1 cut(s)	1032
BfoI	RGCGCY	1 cut(s)	2137
BfrI	CTTAAG	1 cut(s)	1688
BfuI	GTATCC	1 cut(s)	3060
BisI	GCNGC	4 cut(s)	455, 1526, 2163, 3186
BlnI	CCTAGG	1 cut(s)	1454
BlpI	GCTNAGC	1 cut(s)	2465
BlsI	GCNGC	4 cut(s)	456, 1527, 2164, 3187
Bme1390I	CCNGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
Bme18I	GGWCC	6 cut(s)	518, 559, 1459, 1714, 1850, 2999
BmeRI	GACNNNNNGTC	1 cut(s)	1135
BmeT110I	CYCGRG	1 cut(s)	285
BmgT120I	GGNCC	8 cut(s)	518, 559, 1459, 1501, 1714, 1850, 2439, 2999
BmrFI	CCNGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
BmrI	ACTGGG	3 cut(s)	854, 1904, 2331
BmtI	GCTAGC	2 cut(s)	1028, 2649
BmuI	ACTGGG	3 cut(s)	854, 1904, 2331
BoxI	GACNNNNGTC	1 cut(s)	3098
BpiI	GAAGAC	7 cut(s)	393, 1474, 1739, 1801, 2067, 2262, 2733
BplI	GAGNNNNNCTC	2 cut(s)	705, 737
BpmI	CTGGAG	2 cut(s)	347, 1608
Bpu10I	CCTNAGC	2 cut(s)	1755, 2702
Bpu1102I	GCTNAGC	1 cut(s)	2465
BpuEI	CTTGAG	1 cut(s)	2717
Bsa29I	ATCGAT	1 cut(s)	1786
BsaAI	YACGTR	1 cut(s)	2887
BsaBI	GATNNNNATC	1 cut(s)	1659
BsaHI	GRCGYC	3 cut(s)	370, 390, 3207
BsaI	GGTCTC	2 cut(s)	962, 2804
BsaJI	CCNNGG	7 cut(s)	1386, 1436, 1442, 1454, 1846, 2341, 2442
BsaWI	WCCGGW	1 cut(s)	2687
BsaXI	ACNNNNNCTCC	2 cut(s)	320, 350
Bse118I	RCCGGY	1 cut(s)	2957
Bse3DI	GCAATG	4 cut(s)	367, 1173, 1341, 1599
Bse8I	GATNNNNATC	1 cut(s)	1659
BseBI	CCWGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
BseCI	ATCGAT	1 cut(s)	1786
BseDI	CCNNGG	7 cut(s)	1386, 1436, 1442, 1454, 1846, 2341, 2442
BseGI	GGATG	9 cut(s)	316, 1016, 1432, 1462, 1842, 1843, 2291, 2869, 2910
BseJI	GATNNNNATC	1 cut(s)	1659
BseMI	GCAATG	4 cut(s)	367, 1173, 1341, 1599
BseMII	CTCAG	3 cut(s)	1769, 1911, 2619
BsePI	GCGCGC	1 cut(s)	78
BseRI	GAGGAG	2 cut(s)	1065, 2084
BseXI	GCAGC	4 cut(s)	466, 1512, 2174, 3172
BseYI	CCCAGC	4 cut(s)	1020, 1717, 2377, 2816
Bsh1236I	CGCG	1 cut(s)	80
Bsh1285I	CGRYCG	1 cut(s)	1786
BshFI	GGCC	5 cut(s)	149, 1441, 1491, 1503, 2441
BshNI	GGYRCC	2 cut(s)	1219, 2985
BshVI	ATCGAT	1 cut(s)	1786
BsiEI	CGRYCG	1 cut(s)	1786
BsiHKCI	CYCGRG	1 cut(s)	285
BsiSI	CCGG	3 cut(s)	814, 2688, 2958
BslFI	GGGAC	4 cut(s)	1444, 1472, 2098, 2463
BsmAI	GTCTC	2 cut(s)	962, 2804
BsmFI	GGGAC	4 cut(s)	1444, 1472, 2098, 2463
BsmI	GAATGC	2 cut(s)	1603, 2187
BsnI	GGCC	5 cut(s)	149, 1441, 1491, 1503, 2441
Bso31I	GGTCTC	2 cut(s)	962, 2804
BsoBI	CYCGRG	1 cut(s)	285
Bsp1286I	GDGCHC	1 cut(s)	1258
Bsp1720I	GCTNAGC	1 cut(s)	2465
Bsp19I	CCATGG	1 cut(s)	1436
BspACI	CCGC	6 cut(s)	220, 1199, 2192, 2374, 2567, 2876
BspANI	GGCC	5 cut(s)	149, 1441, 1491, 1503, 2441
BspCNI	CTCAG	3 cut(s)	1768, 1912, 2620
BspDI	ATCGAT	1 cut(s)	1786
BspFNI	CGCG	1 cut(s)	80
BspHI	TCATGA	1 cut(s)	1707
BspOI	GCTAGC	2 cut(s)	1028, 2649
BspPI	GGATC	9 cut(s)	521, 534, 942, 1052, 1065, 1376, 1468, 2297, 2762
BspQI	GCTCTTC	1 cut(s)	2114
BspT107I	GGYRCC	2 cut(s)	1219, 2985
BspTI	CTTAAG	1 cut(s)	1688
BspTNI	GGTCTC	2 cut(s)	962, 2804
BsrBI	CCGCTC	1 cut(s)	220
BsrDI	GCAATG	4 cut(s)	367, 1173, 1341, 1599
BsrFI	RCCGGY	1 cut(s)	2957
BssAI	RCCGGY	1 cut(s)	2957
BssECI	CCNNGG	7 cut(s)	1386, 1436, 1442, 1454, 1846, 2341, 2442
BssHII	GCGCGC	1 cut(s)	78
BssNI	GRCGYC	3 cut(s)	370, 390, 3207
BssSI	CACGAG	1 cut(s)	1548
BssT1I	CCWWGG	4 cut(s)	1386, 1436, 1454, 2442
Bst2BI	CACGAG	1 cut(s)	1548
Bst2UI	CCWGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
Bst6I	CTCTTC	4 cut(s)	1334, 2006, 2109, 2114
BstACI	GRCGYC	3 cut(s)	370, 390, 3207
BstAFI	CTTAAG	1 cut(s)	1688
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstBAI	YACGTR	1 cut(s)	2887
BstC8I	GCNNGC	7 cut(s)	28, 80, 1026, 2337, 2366, 2471, 2647
BstDEI	CTNAG	8 cut(s)	1378, 1486, 1755, 1920, 2125, 2465, 2628, 2702
BstDSI	CCRYGG	2 cut(s)	1436, 2341
BstENI	CCTNNNNNAGG	2 cut(s)	1407, 2219
BstF5I	GGATG	9 cut(s)	316, 1016, 1432, 1462, 1842, 1843, 2291, 2869, 2910
BstFNI	CGCG	1 cut(s)	80
BstH2I	RGCGCY	1 cut(s)	2137
BstHHI	GCGC	4 cut(s)	80, 82, 2136, 3153
BstMAI	GTCTC	2 cut(s)	962, 2804
BstMCI	CGRYCG	1 cut(s)	1786
BstMWI	GCNNNNNNNGC	8 cut(s)	249, 737, 1205, 1382, 1598, 2470, 3148, 3182
BstNI	CCWGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
BstNSI	RCATGY	4 cut(s)	2237, 2339, 2368, 2653
BstPAI	GACNNNNGTC	1 cut(s)	3098
BstSCI	CCNGG	8 cut(s)	740, 923, 1441, 1465, 1476, 1561, 1845, 2424
BstSFI	CTRYAG	1 cut(s)	1032
BstUI	CGCG	1 cut(s)	80
BstV1I	GCAGC	4 cut(s)	466, 1512, 2174, 3172
BstV2I	GAAGAC	7 cut(s)	393, 1474, 1739, 1801, 2067, 2262, 2733
BstX2I	RGATCY	3 cut(s)	526, 1057, 2289
BstXI	CCANNNNNNTGG	1 cut(s)	2173
BstYI	RGATCY	3 cut(s)	526, 1057, 2289
Bsu15I	ATCGAT	1 cut(s)	1786
BsuI	GTATCC	1 cut(s)	3060
BsuRI	GGCC	5 cut(s)	149, 1441, 1491, 1503, 2441
BsuTUI	ATCGAT	1 cut(s)	1786
BtgI	CCRYGG	2 cut(s)	1436, 2341
BtgZI	GCGATG	1 cut(s)	2886
BtsCI	GGATG	9 cut(s)	316, 1016, 1432, 1462, 1842, 1843, 2291, 2869, 2910
BtsIMutI	CAGTG	9 cut(s)	150, 254, 380, 699, 867, 1059, 1092, 1501, 1601
Cac8I	GCNNGC	7 cut(s)	28, 80, 1026, 2337, 2366, 2471, 2647
CciI	TCATGA	1 cut(s)	1707
CfoI	GCGC	4 cut(s)	80, 82, 2136, 3153
Cfr10I	RCCGGY	1 cut(s)	2957
Cfr13I	GGNCC	8 cut(s)	518, 559, 1459, 1501, 1714, 1850, 2439, 2999
ClaI	ATCGAT	1 cut(s)	1786
CseI	GACGC	4 cut(s)	378, 398, 3182, 3196
CsiI	ACCWGGT	1 cut(s)	2424
Csp6I	GTAC	5 cut(s)	1050, 1364, 2578, 2986, 3087
CviQI	GTAC	5 cut(s)	1050, 1364, 2578, 2986, 3087
DdeI	CTNAG	8 cut(s)	1378, 1486, 1755, 1920, 2125, 2465, 2628, 2702
DraIII	CACNNNGTG	1 cut(s)	862
DriI	GACNNNNNGTC	1 cut(s)	1135
EaeI	YGGCCR	1 cut(s)	147
Eam1104I	CTCTTC	4 cut(s)	1334, 2006, 2109, 2114
Eam1105I	GACNNNNNGTC	1 cut(s)	1135
EarI	CTCTTC	4 cut(s)	1334, 2006, 2109, 2114
EciI	GGCGGA	1 cut(s)	2181
Eco130I	CCWWGG	4 cut(s)	1386, 1436, 1454, 2442
Eco24I	GRGCYC	1 cut(s)	1258
Eco31I	GGTCTC	2 cut(s)	962, 2804
Eco32I	GATATC	2 cut(s)	1819, 2352
Eco47I	GGWCC	6 cut(s)	518, 559, 1459, 1714, 1850, 2999
Eco47III	AGCGCT	1 cut(s)	2135
Eco57I	CTGAAG	4 cut(s)	696, 1425, 2328, 3080
Eco88I	CYCGRG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	2 cut(s)	1407, 2219
EcoO109I	RGGNCCY	2 cut(s)	518, 1501
EcoRI	GAATTC	3 cut(s)	577, 1355, 2691
EcoRII	CCWGG	8 cut(s)	740, 923, 1441, 1465, 1476, 1561, 1845, 2424
EcoRV	GATATC	2 cut(s)	1819, 2352
EcoT14I	CCWWGG	4 cut(s)	1386, 1436, 1454, 2442
EcoT22I	ATGCAT	2 cut(s)	874, 2337
EcoT38I	GRGCYC	1 cut(s)	1258
ErhI	CCWWGG	4 cut(s)	1386, 1436, 1454, 2442
FaqI	GGGAC	4 cut(s)	1444, 1472, 2098, 2463
FauI	CCCGC	1 cut(s)	2381
FauNDI	CATATG	2 cut(s)	2483, 2968
FbaI	TGATCA	2 cut(s)	804, 1660
Fnu4HI	GCNGC	4 cut(s)	455, 1526, 2163, 3186
FokI	GGATG	9 cut(s)	323, 1003, 1439, 1449, 1829, 1850, 2298, 2876, 2897
FriOI	GRGCYC	1 cut(s)	1258
Fsp4HI	GCNGC	4 cut(s)	455, 1526, 2163, 3186
FspAI	RTGCGCAY	1 cut(s)	3152
FspI	TGCGCA	1 cut(s)	3152
GlaI	GCGC	4 cut(s)	79, 81, 2135, 3152
GluI	GCNGC	4 cut(s)	455, 1526, 2163, 3186
GsaI	CCCAGC	4 cut(s)	1024, 1721, 2381, 2820
GsuI	CTGGAG	2 cut(s)	347, 1608
HaeII	RGCGCY	1 cut(s)	2137
HaeIII	GGCC	5 cut(s)	149, 1441, 1491, 1503, 2441
HapII	CCGG	3 cut(s)	814, 2688, 2958
HgaI	GACGC	4 cut(s)	378, 398, 3182, 3196
HhaI	GCGC	4 cut(s)	80, 82, 2136, 3153
Hin1I	GRCGYC	3 cut(s)	370, 390, 3207
Hin6I	GCGC	4 cut(s)	78, 80, 2134, 3151
HinP1I	GCGC	4 cut(s)	78, 80, 2134, 3151
HincII	GTYRAC	2 cut(s)	601, 888
HindII	GTYRAC	2 cut(s)	601, 888
HindIII	AAGCTT	1 cut(s)	2510
HpaI	GTTAAC	1 cut(s)	888
HpaII	CCGG	3 cut(s)	814, 2688, 2958
HphI	GGTGA	6 cut(s)	140, 167, 698, 848, 2139, 2827
Hpy166II	GTNNAC	9 cut(s)	292, 559, 601, 888, 1129, 2548, 2938, 3002, 3165
Hpy8I	GTNNAC	9 cut(s)	292, 559, 601, 888, 1129, 2548, 2938, 3002, 3165
Hpy99I	CGWCG	1 cut(s)	3176
HpyCH4IV	ACGT	1 cut(s)	2886
HpyF10VI	GCNNNNNNNGC	8 cut(s)	249, 737, 1205, 1382, 1598, 2470, 3148, 3182
HpyF3I	CTNAG	8 cut(s)	1378, 1486, 1755, 1920, 2125, 2465, 2628, 2702
HpySE526I	ACGT	1 cut(s)	2886
Hsp92I	GRCGYC	3 cut(s)	370, 390, 3207
HspAI	GCGC	4 cut(s)	78, 80, 2134, 3151
KpnI	GGTACC	1 cut(s)	2989
Ksp22I	TGATCA	2 cut(s)	804, 1660
KspAI	GTTAAC	1 cut(s)	888
LguI	GCTCTTC	1 cut(s)	2114
LmnI	GCTCC	5 cut(s)	1033, 1589, 2401, 2592, 2878
Lsp1109I	GCAGC	4 cut(s)	466, 1512, 2174, 3172
MabI	ACCWGGT	1 cut(s)	2424
MaeII	ACGT	1 cut(s)	2886
MaeIII	GTNAC	6 cut(s)	62, 686, 1081, 2302, 2636, 2839
MbiI	CCGCTC	1 cut(s)	220
MfeI	CAATTG	3 cut(s)	2451, 3096, 3211
MflI	RGATCY	3 cut(s)	526, 1057, 2289
MhlI	GDGCHC	1 cut(s)	1258
MlyI	GAGTC	5 cut(s)	135, 289, 1426, 2095, 2724
MmeI	TCCRAC	4 cut(s)	118, 1394, 2327, 2942
Mph1103I	ATGCAT	2 cut(s)	874, 2337
MroXI	GAANNNNTTC	2 cut(s)	51, 335
MslI	CAYNNNNRTG	2 cut(s)	2171, 2340
MspA1I	CMGCKG	2 cut(s)	1619, 2569
MspCI	CTTAAG	1 cut(s)	1688
MspI	CCGG	3 cut(s)	814, 2688, 2958
MspR9I	CCNGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
MunI	CAATTG	3 cut(s)	2451, 3096, 3211
Mva1269I	GAATGC	2 cut(s)	1603, 2187
MvaI	CCWGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
MvnI	CGCG	1 cut(s)	80
MwoI	GCNNNNNNNGC	8 cut(s)	249, 737, 1205, 1382, 1598, 2470, 3148, 3182
NcoI	CCATGG	1 cut(s)	1436
NdeI	CATATG	2 cut(s)	2483, 2968
NheI	GCTAGC	2 cut(s)	1024, 2645
NmuCI	GTSAC	4 cut(s)	62, 686, 2302, 2839
NsbI	TGCGCA	1 cut(s)	3152
NsiI	ATGCAT	2 cut(s)	874, 2337
NspI	RCATGY	4 cut(s)	2237, 2339, 2368, 2653
PaeI	GCATGC	2 cut(s)	2339, 2368
PaeR7I	CTCGAG	1 cut(s)	285
PagI	TCATGA	1 cut(s)	1707
PauI	GCGCGC	1 cut(s)	78
PciI	ACATGT	1 cut(s)	2233
PciSI	GCTCTTC	1 cut(s)	2114
PcsI	WCGNNNNNNNCGW	2 cut(s)	1555, 3082
PctI	GAATGC	2 cut(s)	1603, 2187
PdmI	GAANNNNTTC	2 cut(s)	51, 335
PfeI	GAWTC	7 cut(s)	58, 68, 419, 472, 1181, 1606, 2033
PflMI	CCANNNNNTGG	3 cut(s)	1442, 1724, 3008
PfoI	TCCNGGA	1 cut(s)	1465
PkrI	GCNGC	4 cut(s)	456, 1527, 2164, 3187
Ple19I	CGATCG	1 cut(s)	1786
PleI	GAGTC	5 cut(s)	135, 288, 1426, 2095, 2723
PpsI	GAGTC	5 cut(s)	135, 288, 1426, 2095, 2723
Ppu21I	YACGTR	1 cut(s)	2887
PpuMI	RGGWCCY	1 cut(s)	518
PscI	ACATGT	1 cut(s)	2233
PshAI	GACNNNNGTC	1 cut(s)	3098
PshBI	ATTAAT	1 cut(s)	960
Psp5II	RGGWCCY	1 cut(s)	518
Psp6I	CCWGG	8 cut(s)	740, 923, 1441, 1465, 1476, 1561, 1845, 2424
PspFI	CCCAGC	4 cut(s)	1020, 1717, 2377, 2816
PspGI	CCWGG	8 cut(s)	740, 923, 1441, 1465, 1476, 1561, 1845, 2424
PspPI	GGNCC	8 cut(s)	518, 559, 1459, 1501, 1714, 1850, 2439, 2999
PspPPI	RGGWCCY	1 cut(s)	518
PspXI	VCTCGAGB	1 cut(s)	285
PsuI	RGATCY	3 cut(s)	526, 1057, 2289
PteI	GCGCGC	1 cut(s)	78
PvuI	CGATCG	1 cut(s)	1786
PvuII	CAGCTG	1 cut(s)	1619
RsaI	GTAC	5 cut(s)	1051, 1365, 2579, 2987, 3088
RsaNI	GTAC	5 cut(s)	1050, 1364, 2578, 2986, 3087
RseI	CAYNNNNRTG	2 cut(s)	2171, 2340
SapI	GCTCTTC	1 cut(s)	2114
SatI	GCNGC	4 cut(s)	455, 1526, 2163, 3186
Sau96I	GGNCC	8 cut(s)	518, 559, 1459, 1501, 1714, 1850, 2439, 2999
SchI	GAGTC	5 cut(s)	135, 289, 1426, 2095, 2724
ScrFI	CCNGG	8 cut(s)	742, 925, 1443, 1467, 1478, 1563, 1847, 2426
SduI	GDGCHC	1 cut(s)	1258
SexAI	ACCWGGT	1 cut(s)	2424
SfcI	CTRYAG	1 cut(s)	1032
Sfr274I	CTCGAG	1 cut(s)	285
SinI	GGWCC	6 cut(s)	518, 559, 1459, 1714, 1850, 2999
SlaI	CTCGAG	1 cut(s)	285
SmiMI	CAYNNNNRTG	2 cut(s)	2171, 2340
SmlI	CTYRAG	3 cut(s)	285, 1688, 2696
SmoI	CTYRAG	3 cut(s)	285, 1688, 2696
SpeI	ACTAGT	1 cut(s)	662
SphI	GCATGC	2 cut(s)	2339, 2368
SsiI	CCGC	6 cut(s)	220, 1199, 2192, 2374, 2567, 2876
StyD4I	CCNGG	8 cut(s)	740, 923, 1441, 1465, 1476, 1561, 1845, 2424
StyI	CCWWGG	4 cut(s)	1386, 1436, 1454, 2442
TaiI	ACGT	1 cut(s)	2889
TaqI	TCGA	9 cut(s)	286, 1531, 1609, 1653, 1786, 1815, 2079, 2434, 3156
TatI	WGTACW	1 cut(s)	1049
TfiI	GAWTC	7 cut(s)	58, 68, 419, 472, 1181, 1606, 2033
TscAI	CASTG	9 cut(s)	157, 254, 380, 706, 867, 1059, 1099, 1501, 1608
TseFI	GTSAC	4 cut(s)	62, 686, 2302, 2839
TseI	GCWGC	4 cut(s)	454, 1525, 2162, 3185
Tsp45I	GTSAC	4 cut(s)	62, 686, 2302, 2839
TspGWI	ACGGA	3 cut(s)	309, 1381, 2045
TspRI	CASTG	9 cut(s)	157, 254, 380, 706, 867, 1059, 1099, 1501, 1608
Van91I	CCANNNNNTGG	3 cut(s)	1442, 1724, 3008
Vha464I	CTTAAG	1 cut(s)	1688
VpaK11BI	GGWCC	6 cut(s)	518, 559, 1459, 1714, 1850, 2999
VspI	ATTAAT	1 cut(s)	960
XagI	CCTNNNNNAGG	2 cut(s)	1407, 2219
XapI	RAATTY	5 cut(s)	577, 1262, 1355, 2457, 2691
XbaI	TCTAGA	1 cut(s)	410
XceI	RCATGY	4 cut(s)	2237, 2339, 2368, 2653
XcmI	CCANNNNNNNNNTGG	3 cut(s)	16, 1111, 2053
XhoI	CTCGAG	1 cut(s)	285
XmaJI	CCTAGG	1 cut(s)	1454
XmnI	GAANNNNTTC	2 cut(s)	51, 335
Zsp2I	ATGCAT	2 cut(s)	874, 2337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.