FvH4_2g32570

xyloglucan glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0014524
Physical Location & Seq
Forward (+)
24654466 .. 24659223
4758 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g32570.t1

Sequence Viewer

Length: 2109 bp
ATGGCGCGGTTTTGGTGGTCGAAAGAGGAGAGCCACCGAGGGACGCCGGTGGTGGTGAAGATGGAGAATCCCAACTGGTCAATGGTGGAGCTGGAGGGCCCCACCGACGAGGACTTCCTAATGGCGGAGTCTCCGGGCCGAGCCAGAGACAAAGGCCGCGGCAAAAACGCCAAGCAGTTCACTTGGGTCCTCCTCCTCAAGGCCCACCGTGCCGCCGGCTGCCTCACCTCCCTCGGCTCCGCAATGCTGGGCCTCGCCTCCGCCATACGACGCCGCGTCGCCTCCGGAAGGACCGACACTGACCCCGACCAGGACGCCGACAGCGAGCCACGTGGCGGCAACCCGGCGGCGAAGTCGAGATTCTATCTGTGCATCAAGCTGTTTCTGTTCATGTCTCTGGTGCTGTTGGGTTTTGAGGTCGCAGCGTATTTTAAGGGGTGGCACTTGGGAGCTCCACACCTGCAGCTTCAGTACTTCTGGGATATGGAGTTTGACGGGGTTAAGGGTGCTTTCGATTGGGTCTATTCCAAGTGGGTTTTGATTCGGGTAGACTATTTGGCTCCGCCGCTTCAGTTTCTGGCCAATGCTTGTATTGTGCTCTTCATGGTTCAGAGCTTGGATAGGCTGATTCTGTGCTTGGGGTGTTTCTGGATCCGGTTCAAGAAGATCAAACCGGTTCCAAAACGCGGTCCTTTGGATCTTGAATCAGCAGAGTATGGCTACTTCCCTATGGTGCTAGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAGTCAATTGGCGCTGTGTGCAATTTAGACTGGCCAAAGTCGAGGTTGTTGGTTCAAGTTCTTGACGATTCGGATGACCCGACTACGCAGTTTATGATCAAAGAGGAGGTCCAGAAATGGCAAAAGGAGGGGGCCAACATTTTGTATCGGCATAGAGTGATTAGAGATGGATACAAGGCTGGCAATCTCAAGTCTGCAATGAATTGTAGCTATGTGAAAGACTACGAGTTTGTTGCAATTTTCGACGCCGATTTTCAGCCTGCTCCTGATTTCCTCAAGAGAACAGTTCCTCACTTCCAGGACAATGAAGAACTTGGGCTGGTGCAAGCCAGGTGGTCCTTTGTGAACAGGGATGAGAACCTACTCACAAGGTTGCAGAACATTAACTTGACATTCCACTTTGAGGTCGAACAACAAGTAAATAGTGTGTTCATTAATTTCTTTGGGTTCAACGGGACAGCTGGGGTGTGGAGGATAAAGGCTCTTGAGGACTCTGGTGGGTGGTTGGAGAGGACCACTGTTGAGGACATGGACATTGCTGTCCGTGCTCATCTTCATGGCTGGAAATTCATCTTCCTCAATGATGTTGAGTGCCAGTGTGAAGTACCTGAATCTTACGAAGCTTATCGGAAACAACAACACAGATGGCACTCGGGACCTATGCAGTTGTTTCGCCTATGTTTGCCTGCTATCATCAAATCCAAGATCAGCATTTGGAAGAAATTCAATTTGATATTCCTCTTCTTTCTGCTCCGAAAGTTGATATTGCCCTTCTATTCTTTCACCCTATTTTGCATAATTCTCCCCATGACAATGTTCATCCCCGAAGCTGAGCTCCCAGCATGGGTTGTATGCTACATCCCTGCAACAATGTCATTCCTCAATATTCTTCCTGCCCCGAAAGCCTTCCCTTTCATTGTTCCATACCTCCTTTTCGAAAACACCATGTCAGTGACCAAATTCAATGCCATGATATCCGGCTTATTCCAGCTTGGGAGTGCATATGAGTGGGTGGTCACCAAGAAGTCTGGGCGTTCCTCGGAGGGTGATCTTGTCTCCTTAGTTGAGAAAGAGCCAAAGCATCACAGGGGGGTCTCGGTTCCAGACCTTGCTGAAATGAAGGAAGAAATTCGACAGCAGGAGCAAAAAGCTAAGAAGAAGAAGAAGCATAACAGAATATACACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACGGCTTCAGCTCGAAGCCTGCTGTCTGCTCAGGGCATCCATTTCTACTTCTTGTTGTTTCAGGGAATCTCATTCCTGCTGGTTGGTTTAGATTTGATCGGTGAGCAGGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

703

Amino Acids

80.77

Weight (kDa)

8.38

Isoelectric Point (pI)

38.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 243 - 476 1.7e-15 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 248 - 387 2.5e-11 Glycosyl transferase family 2
Glyco_transf_21 PF13506 332 - 476 6.2e-08 Glycosyl transferase family 21
Glyco_trans_2_3 PF13632 337 - 532 7.3e-22 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014524)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G07960 AT4G07960
fragaria_vesca FvH4_2g32570
malus_domestica MD08G1076900.v1.1 MD15G1064400.v1.1
prunus_persica Prupe.1G418400_v2.0.a1
pyrus_communis pycom08g06370 pycom15g06110
rosa_chinensis RchiOBHm_Chr6g0310111
rosa_laevigata RLG00000010510
rosa_multiflora Rmu_sc0000294.1_g000027
rosa_roxburghii Rroxscaffold_7G00158860
rosa_rugosa Rorug06G0377600
rosa_samantha Rh6BG500800 Rh6CG505900 Rh6DG491800
rosa_wichuraiana Rw6G042760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 468
AasI GACNNNNNNGTC 1 cut(s) 1316
Acc36I ACCTGC 2 cut(s) 468, 2089
AccI GTMKAC 1 cut(s) 549
AccII CGCG 4 cut(s) 7, 159, 276, 687
AccIII TCCGGA 1 cut(s) 284
AclWI GGATC 4 cut(s) 646, 659, 705, 739
AcoI YGGCCR 2 cut(s) 579, 809
AcsI RAATTY 4 cut(s) 1343, 1499, 1736, 1905
AcuI CTGAAG 3 cut(s) 452, 554, 1983
AcvI CACGTG 1 cut(s) 332
AcyI GRCGYC 4 cut(s) 44, 271, 315, 1023
AfaI GTAC 2 cut(s) 473, 1383
AfiI CCNNNNNNNGG 8 cut(s) 124, 199, 288, 310, 335, 686, 1180, 1621
AgeI ACCGGT 1 cut(s) 673
AgsI TTSAA 6 cut(s) 661, 704, 833, 1228, 1504, 1741
AhdI GACNNNNNGTC 1 cut(s) 275
AjnI CCWGG 3 cut(s) 309, 1074, 1106
Alw21I GWGCWC 4 cut(s) 454, 600, 1327, 1614
Alw26I GTCTC 5 cut(s) 135, 141, 399, 1837, 1876
AlwI GGATC 4 cut(s) 646, 659, 705, 739
AlwNI CAGNNNCTG 1 cut(s) 577
Ama87I CYCGRG 1 cut(s) 1429
Aor13HI TCCGGA 1 cut(s) 284
AoxI GGCC 8 cut(s) 97, 136, 154, 201, 250, 579, 809, 909
ApaI GGGCCC 1 cut(s) 101
ApeKI GCWGC 3 cut(s) 219, 422, 463
ApoI RAATTY 4 cut(s) 1343, 1499, 1736, 1905
ArsI GACNNNNNNTTYG 4 cut(s) 870, 902, 989, 1021
AseI ATTAAT 1 cut(s) 1212
AsiGI ACCGGT 1 cut(s) 673
Asp700I GAANNNNTTC 3 cut(s) 1499, 1682, 1905
AspLEI GCGC 2 cut(s) 7, 791
AsuC2I CCSGG 2 cut(s) 135, 344
AsuHPI GGTGA 6 cut(s) 67, 217, 1552, 1786, 1835, 2105
AsuII TTCGAA 1 cut(s) 1713
AvaI CYCGRG 1 cut(s) 1429
AvaII GGWCC 7 cut(s) 187, 291, 689, 886, 1113, 1290, 1433
BaeGI GKGCMC 1 cut(s) 101
BalI TGGCCA 2 cut(s) 581, 811
BamHI GGATCC 1 cut(s) 651
BanII GRGCYC 3 cut(s) 101, 454, 1614
BarI GAAGNNNNNNTAC 2 cut(s) 707, 739
BbrPI CACGTG 1 cut(s) 332
Bbv12I GWGCWC 4 cut(s) 454, 600, 1327, 1614
BbvI GCAGC 3 cut(s) 206, 434, 475
BccI CCATC 3 cut(s) 55, 938, 1416
BceAI ACGGC 1 cut(s) 2010
BcgI CGANNNNNNTGC 4 cut(s) 992, 1026, 1430, 1464
BciT130I CCWGG 3 cut(s) 311, 1076, 1108
BciVI GTATCC 1 cut(s) 941
BclI TGATCA 1 cut(s) 873
BcnI CCSGG 2 cut(s) 135, 344
BcoDI GTCTC 5 cut(s) 135, 141, 399, 1837, 1876
BfaI CTAG 1 cut(s) 737
BfmI CTRYAG 1 cut(s) 461
BfoI RGCGCY 1 cut(s) 792
BfuAI ACCTGC 2 cut(s) 468, 2089
BfuI GTATCC 1 cut(s) 941
BlpI GCTNAGC 1 cut(s) 1608
BmcAI AGTACT 1 cut(s) 473
Bme1390I CCNGG 5 cut(s) 135, 311, 344, 1076, 1108
Bme18I GGWCC 7 cut(s) 187, 291, 689, 886, 1113, 1290, 1433
BmeRI GACNNNNNGTC 1 cut(s) 275
BmeT110I CYCGRG 1 cut(s) 1429
BmrFI CCNGG 5 cut(s) 135, 311, 344, 1076, 1108
BmsI GCATC 3 cut(s) 381, 1867, 2037
BpmI CTGGAG 1 cut(s) 113
Bpu10I CCTNAGC 1 cut(s) 2022
Bpu1102I GCTNAGC 1 cut(s) 1608
Bpu14I TTCGAA 1 cut(s) 1713
BpuEI CTTGAG 4 cut(s) 182, 950, 1037, 1283
BpuMI CCSGG 2 cut(s) 135, 344
BsaAI YACGTR 1 cut(s) 332
BsaHI GRCGYC 4 cut(s) 44, 271, 315, 1023
BsaI GGTCTC 1 cut(s) 1876
BsaJI CCNNGG 4 cut(s) 37, 157, 232, 1815
BsaWI WCCGGW 3 cut(s) 284, 654, 673
Bsc4I CCNNNNNNNGG 8 cut(s) 124, 199, 288, 310, 335, 686, 1180, 1621
Bse118I RCCGGY 3 cut(s) 46, 215, 673
Bse1I ACTGG 3 cut(s) 80, 812, 1372
Bse3DI GCAATG 4 cut(s) 249, 763, 981, 1311
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 3 cut(s) 311, 1076, 1108
BseDI CCNNGG 4 cut(s) 37, 157, 232, 1815
BseGI GGATG 5 cut(s) 856, 1135, 1596, 1635, 2028
BseLI CCNNNNNNNGG 8 cut(s) 124, 199, 288, 310, 335, 686, 1180, 1621
BseMI GCAATG 4 cut(s) 249, 763, 981, 1311
BseMII CTCAG 2 cut(s) 1599, 2036
BseNI ACTGG 3 cut(s) 80, 812, 1372
BseRI GAGGAG 4 cut(s) 41, 182, 185, 896
BseSI GKGCMC 1 cut(s) 101
BseXI GCAGC 3 cut(s) 206, 434, 475
BseYI CCCAGC 3 cut(s) 247, 1238, 1615
Bsh1236I CGCG 4 cut(s) 7, 159, 276, 687
BshFI GGCC 8 cut(s) 99, 138, 156, 203, 252, 581, 811, 911
BshTI ACCGGT 1 cut(s) 673
BsiHKAI GWGCWC 4 cut(s) 454, 600, 1327, 1614
BsiHKCI CYCGRG 1 cut(s) 1429
BsiSI CCGG 8 cut(s) 47, 134, 216, 285, 344, 655, 674, 1755
BslFI GGGAC 3 cut(s) 55, 1246, 1446
BslI CCNNNNNNNGG 8 cut(s) 124, 199, 288, 310, 335, 686, 1180, 1621
BsmAI GTCTC 5 cut(s) 135, 141, 399, 1837, 1876
BsmFI GGGAC 3 cut(s) 55, 1246, 1446
BsnI GGCC 8 cut(s) 99, 138, 156, 203, 252, 581, 811, 911
Bso31I GGTCTC 1 cut(s) 1876
BsoBI CYCGRG 1 cut(s) 1429
Bsp119I TTCGAA 1 cut(s) 1713
Bsp120I GGGCCC 1 cut(s) 97
Bsp1286I GDGCHC 5 cut(s) 101, 454, 600, 1327, 1614
Bsp13I TCCGGA 1 cut(s) 284
Bsp143I GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
Bsp1720I GCTNAGC 1 cut(s) 1608
BspANI GGCC 8 cut(s) 99, 138, 156, 203, 252, 581, 811, 911
BspCNI CTCAG 2 cut(s) 1600, 2035
BspEI TCCGGA 1 cut(s) 284
BspFNI CGCG 4 cut(s) 7, 159, 276, 687
BspMAI CTGCAG 1 cut(s) 465
BspMI ACCTGC 2 cut(s) 468, 2089
BspPI GGATC 4 cut(s) 646, 659, 705, 739
BspQI GCTCTTC 1 cut(s) 605
BspT104I TTCGAA 1 cut(s) 1713
BspTNI GGTCTC 1 cut(s) 1876
BsrDI GCAATG 4 cut(s) 249, 763, 981, 1311
BsrFI RCCGGY 3 cut(s) 46, 215, 673
BsrI ACTGG 3 cut(s) 80, 812, 1372
BssAI RCCGGY 3 cut(s) 46, 215, 673
BssECI CCNNGG 4 cut(s) 37, 157, 232, 1815
BssMI GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
BssNI GRCGYC 4 cut(s) 44, 271, 315, 1023
Bst2UI CCWGG 3 cut(s) 311, 1076, 1108
Bst4CI ACNGT 3 cut(s) 209, 1063, 1297
Bst6I CTCTTC 2 cut(s) 605, 1523
BstACI GRCGYC 4 cut(s) 44, 271, 315, 1023
BstBAI YACGTR 1 cut(s) 332
BstBI TTCGAA 1 cut(s) 1713
BstC8I GCNNGC 8 cut(s) 217, 326, 958, 1038, 1104, 1464, 1971, 2012
BstDEI CTNAG 4 cut(s) 1608, 1837, 1929, 2022
BstDSI CCRYGG 1 cut(s) 157
BstEII GGTNACC 1 cut(s) 1792
BstENI CCTNNNNNAGG 2 cut(s) 197, 286
BstF5I GGATG 5 cut(s) 856, 1135, 1596, 1635, 2028
BstFNI CGCG 4 cut(s) 7, 159, 276, 687
BstH2I RGCGCY 1 cut(s) 792
BstHHI GCGC 2 cut(s) 7, 791
BstKTI GATC 8 cut(s) 654, 669, 700, 747, 876, 1485, 1828, 2091
BstMAI GTCTC 5 cut(s) 135, 141, 399, 1837, 1876
BstMBI GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
BstMWI GCNNNNNNNGC 4 cut(s) 209, 795, 1322, 1679
BstNI CCWGG 3 cut(s) 311, 1076, 1108
BstPI GGTNACC 1 cut(s) 1792
BstSCI CCNGG 5 cut(s) 133, 309, 342, 1074, 1106
BstSFI CTRYAG 1 cut(s) 461
BstSLI GKGCMC 1 cut(s) 101
BstUI CGCG 4 cut(s) 7, 159, 276, 687
BstV1I GCAGC 3 cut(s) 206, 434, 475
BstX2I RGATCY 3 cut(s) 651, 697, 744
BstYI RGATCY 3 cut(s) 651, 697, 744
BsuI GTATCC 1 cut(s) 941
BsuRI GGCC 8 cut(s) 99, 138, 156, 203, 252, 581, 811, 911
BtgI CCRYGG 1 cut(s) 157
BtsCI GGATG 5 cut(s) 856, 1135, 1596, 1635, 2028
BtsIMutI CAGTG 4 cut(s) 297, 1293, 1379, 1734
BveI ACCTGC 2 cut(s) 468, 2089
Cac8I GCNNGC 8 cut(s) 217, 326, 958, 1038, 1104, 1464, 1971, 2012
CaiI CAGNNNCTG 1 cut(s) 577
CfoI GCGC 2 cut(s) 7, 791
Cfr10I RCCGGY 3 cut(s) 46, 215, 673
Cfr42I CCGCGG 1 cut(s) 160
CseI GACGC 5 cut(s) 52, 265, 279, 323, 1031
Csp6I GTAC 2 cut(s) 472, 1382
CspAI ACCGGT 1 cut(s) 673
CspCI CAANNNNNGTGG 2 cut(s) 1091, 1126
CviAII CATG 9 cut(s) 391, 604, 751, 1306, 1334, 1585, 1620, 1723, 1747
CviQI GTAC 2 cut(s) 472, 1382
DdeI CTNAG 4 cut(s) 1608, 1837, 1929, 2022
DpnI GATC 8 cut(s) 653, 668, 699, 746, 875, 1484, 1827, 2090
DpnII GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
DrdI GACNNNNNNGTC 1 cut(s) 1316
DriI GACNNNNNGTC 1 cut(s) 275
DseDI GACNNNNNNGTC 1 cut(s) 1316
EaeI YGGCCR 2 cut(s) 579, 809
Eam1104I CTCTTC 2 cut(s) 605, 1523
Eam1105I GACNNNNNGTC 1 cut(s) 275
EarI CTCTTC 2 cut(s) 605, 1523
EciI GGCGGA 3 cut(s) 140, 250, 552
Ecl136II GAGCTC 2 cut(s) 452, 1612
Eco24I GRGCYC 3 cut(s) 101, 454, 1614
Eco31I GGTCTC 1 cut(s) 1876
Eco32I GATATC 1 cut(s) 1752
Eco47I GGWCC 7 cut(s) 187, 291, 689, 886, 1113, 1290, 1433
Eco53kI GAGCTC 2 cut(s) 452, 1612
Eco57I CTGAAG 3 cut(s) 452, 554, 1983
Eco72I CACGTG 1 cut(s) 332
Eco88I CYCGRG 1 cut(s) 1429
Eco91I GGTNACC 1 cut(s) 1792
EcoICRI GAGCTC 2 cut(s) 452, 1612
EcoNI CCTNNNNNAGG 2 cut(s) 197, 286
EcoO109I RGGNCCY 4 cut(s) 97, 98, 187, 1433
EcoO65I GGTNACC 1 cut(s) 1792
EcoRII CCWGG 3 cut(s) 309, 1074, 1106
EcoRV GATATC 1 cut(s) 1752
EcoT38I GRGCYC 3 cut(s) 101, 454, 1614
FaeI CATG 9 cut(s) 394, 607, 754, 1309, 1337, 1588, 1623, 1726, 1750
FaqI GGGAC 3 cut(s) 55, 1246, 1446
FatI CATG 9 cut(s) 390, 603, 750, 1305, 1333, 1584, 1619, 1722, 1746
FauNDI CATATG 1 cut(s) 1780
FbaI TGATCA 1 cut(s) 873
FblI GTMKAC 1 cut(s) 549
FokI GGATG 5 cut(s) 863, 1142, 1583, 1622, 2015
FriOI GRGCYC 3 cut(s) 101, 454, 1614
FspBI CTAG 1 cut(s) 737
GlaI GCGC 2 cut(s) 6, 790
GsaI CCCAGC 3 cut(s) 251, 1242, 1619
GsuI CTGGAG 1 cut(s) 113
HaeII RGCGCY 1 cut(s) 792
HaeIII GGCC 8 cut(s) 99, 138, 156, 203, 252, 581, 811, 911
HapII CCGG 8 cut(s) 47, 134, 216, 285, 344, 655, 674, 1755
HgaI GACGC 5 cut(s) 52, 265, 279, 323, 1031
HhaI GCGC 2 cut(s) 7, 791
Hin1I GRCGYC 4 cut(s) 44, 271, 315, 1023
Hin1II CATG 9 cut(s) 394, 607, 754, 1309, 1337, 1588, 1623, 1726, 1750
Hin6I GCGC 2 cut(s) 5, 789
HinP1I GCGC 2 cut(s) 5, 789
HindIII AAGCTT 1 cut(s) 1398
HpaII CCGG 8 cut(s) 47, 134, 216, 285, 344, 655, 674, 1755
HphI GGTGA 6 cut(s) 67, 217, 1552, 1786, 1835, 2105
Hpy166II GTNNAC 3 cut(s) 180, 550, 1123
Hpy188I TCNGA 6 cut(s) 612, 744, 850, 1407, 1532, 1819
Hpy8I GTNNAC 3 cut(s) 180, 550, 1123
Hpy99I CGWCG 4 cut(s) 110, 273, 281, 1025
HpyAV CCTTC 5 cut(s) 282, 1558, 1693, 1891, 1994
HpyCH4III ACNGT 3 cut(s) 209, 1063, 1297
HpyCH4IV ACGT 1 cut(s) 331
HpyF10VI GCNNNNNNNGC 4 cut(s) 209, 795, 1322, 1679
HpyF3I CTNAG 4 cut(s) 1608, 1837, 1929, 2022
HpySE526I ACGT 1 cut(s) 331
Hsp92I GRCGYC 4 cut(s) 44, 271, 315, 1023
Hsp92II CATG 9 cut(s) 394, 607, 754, 1309, 1337, 1588, 1623, 1726, 1750
HspAI GCGC 2 cut(s) 5, 789
Kpn2I TCCGGA 1 cut(s) 284
KroI GCCGGC 1 cut(s) 215
KroNI GCCGGC 1 cut(s) 217
Ksp22I TGATCA 1 cut(s) 873
KspI CCGCGG 1 cut(s) 160
Kzo9I GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
LguI GCTCTTC 1 cut(s) 605
Lsp1109I GCAGC 3 cut(s) 206, 434, 475
LweI GCATC 3 cut(s) 381, 1867, 2037
MaeI CTAG 1 cut(s) 737
MaeII ACGT 1 cut(s) 331
MaeIII GTNAC 2 cut(s) 1729, 1792
MalI GATC 8 cut(s) 653, 668, 699, 746, 875, 1484, 1827, 2090
MboI GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
MfeI CAATTG 1 cut(s) 783
MflI RGATCY 3 cut(s) 651, 697, 744
MhlI GDGCHC 5 cut(s) 101, 454, 600, 1327, 1614
MlsI TGGCCA 2 cut(s) 581, 811
MluNI TGGCCA 2 cut(s) 581, 811
MlyI GAGTC 2 cut(s) 137, 1262
MmeI TCCRAC 1 cut(s) 1263
Mox20I TGGCCA 2 cut(s) 581, 811
MroI TCCGGA 1 cut(s) 284
MroNI GCCGGC 1 cut(s) 215
MroXI GAANNNNTTC 3 cut(s) 1499, 1682, 1905
MscI TGGCCA 2 cut(s) 581, 811
MseI TTAA 4 cut(s) 432, 501, 1161, 1212
MslI CAYNNNNRTG 4 cut(s) 1332, 1589, 1727, 1783
Msp20I TGGCCA 2 cut(s) 581, 811
MspA1I CMGCKG 2 cut(s) 159, 1238
MspI CCGG 8 cut(s) 47, 134, 216, 285, 344, 655, 674, 1755
MspR9I CCNGG 5 cut(s) 135, 311, 344, 1076, 1108
MunI CAATTG 1 cut(s) 783
MvaI CCWGG 3 cut(s) 311, 1076, 1108
MvnI CGCG 4 cut(s) 7, 159, 276, 687
MwoI GCNNNNNNNGC 4 cut(s) 209, 795, 1322, 1679
NaeI GCCGGC 1 cut(s) 217
NciI CCSGG 2 cut(s) 135, 344
NdeI CATATG 1 cut(s) 1780
NdeII GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
NgoMIV GCCGGC 1 cut(s) 215
NlaIII CATG 9 cut(s) 394, 607, 754, 1309, 1337, 1588, 1623, 1726, 1750
NmeAIII GCCGAG 2 cut(s) 164, 213
NmuCI GTSAC 2 cut(s) 1729, 1792
NspV TTCGAA 1 cut(s) 1713
PaqCI CACCTGC 1 cut(s) 468
PciSI GCTCTTC 1 cut(s) 605
PcsI WCGNNNNNNNCGW 2 cut(s) 321, 854
PdiI GCCGGC 1 cut(s) 217
PdmI GAANNNNTTC 3 cut(s) 1499, 1682, 1905
PfeI GAWTC 8 cut(s) 67, 360, 541, 628, 704, 845, 1388, 2058
PfoI TCCNGGA 1 cut(s) 1074
PinAI ACCGGT 1 cut(s) 673
PleI GAGTC 2 cut(s) 136, 1262
PmaCI CACGTG 1 cut(s) 332
PmlI CACGTG 1 cut(s) 332
PpsI GAGTC 2 cut(s) 136, 1262
Ppu21I YACGTR 1 cut(s) 332
PpuMI RGGWCCY 2 cut(s) 187, 1433
PshBI ATTAAT 1 cut(s) 1212
Psp124BI GAGCTC 2 cut(s) 454, 1614
Psp5II RGGWCCY 2 cut(s) 187, 1433
Psp6I CCWGG 3 cut(s) 309, 1074, 1106
PspCI CACGTG 1 cut(s) 332
PspEI GGTNACC 1 cut(s) 1792
PspFI CCCAGC 3 cut(s) 247, 1238, 1615
PspGI CCWGG 3 cut(s) 309, 1074, 1106
PspOMI GGGCCC 1 cut(s) 97
PspPPI RGGWCCY 2 cut(s) 187, 1433
PstI CTGCAG 1 cut(s) 465
PstNI CAGNNNCTG 1 cut(s) 577
PsuI RGATCY 3 cut(s) 651, 697, 744
PvuII CAGCTG 1 cut(s) 1238
RsaI GTAC 2 cut(s) 473, 1383
RsaNI GTAC 2 cut(s) 472, 1382
RseI CAYNNNNRTG 4 cut(s) 1332, 1589, 1727, 1783
SacI GAGCTC 2 cut(s) 454, 1614
SacII CCGCGG 1 cut(s) 160
SapI GCTCTTC 1 cut(s) 605
SaqAI TTAA 4 cut(s) 432, 501, 1161, 1212
Sau3AI GATC 8 cut(s) 651, 666, 697, 744, 873, 1482, 1825, 2088
ScaI AGTACT 1 cut(s) 473
SchI GAGTC 2 cut(s) 137, 1262
ScrFI CCNGG 5 cut(s) 135, 311, 344, 1076, 1108
SduI GDGCHC 5 cut(s) 101, 454, 600, 1327, 1614
SfaNI GCATC 3 cut(s) 381, 1867, 2037
SfcI CTRYAG 1 cut(s) 461
Sfr303I CCGCGG 1 cut(s) 160
SfuI TTCGAA 1 cut(s) 1713
SgrAI CRCCGGYG 1 cut(s) 46
SgrBI CCGCGG 1 cut(s) 160
SinI GGWCC 7 cut(s) 187, 291, 689, 886, 1113, 1290, 1433
SmiMI CAYNNNNRTG 4 cut(s) 1332, 1589, 1727, 1783
SmlI CTYRAG 4 cut(s) 197, 965, 1052, 1262
SmoI CTYRAG 4 cut(s) 197, 965, 1052, 1262
SspI AATATT 1 cut(s) 1663
SspMI CTAG 1 cut(s) 737
SstI GAGCTC 2 cut(s) 454, 1614
StyD4I CCNGG 5 cut(s) 133, 309, 342, 1074, 1106
TaaI ACNGT 3 cut(s) 209, 1063, 1297
TaiI ACGT 1 cut(s) 334
TaqI TCGA 9 cut(s) 20, 356, 513, 818, 1020, 1185, 1713, 1909, 2005
TaqII GACCGA 1 cut(s) 308
TatI WGTACW 1 cut(s) 471
TauI GCSGC 7 cut(s) 159, 162, 215, 276, 339, 350, 568
TfiI GAWTC 8 cut(s) 67, 360, 541, 628, 704, 845, 1388, 2058
Tru1I TTAA 4 cut(s) 432, 501, 1161, 1212
Tru9I TTAA 4 cut(s) 432, 501, 1161, 1212
TscAI CASTG 4 cut(s) 304, 1300, 1379, 1734
TseFI GTSAC 2 cut(s) 1729, 1792
TseI GCWGC 3 cut(s) 219, 422, 463
Tsp45I GTSAC 2 cut(s) 1729, 1792
TspGWI ACGGA 1 cut(s) 1310
TspRI CASTG 4 cut(s) 304, 1300, 1379, 1734
VpaK11BI GGWCC 7 cut(s) 187, 291, 689, 886, 1113, 1290, 1433
VspI ATTAAT 1 cut(s) 1212
XagI CCTNNNNNAGG 2 cut(s) 197, 286
XapI RAATTY 4 cut(s) 1343, 1499, 1736, 1905
XcmI CCANNNNNNNNNTGG 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 549
XmnI GAANNNNTTC 3 cut(s) 1499, 1682, 1905
XspI CTAG 1 cut(s) 737
ZrmI AGTACT 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.