Rh6DG491800

xyloglucan glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0014524
Physical Location & Seq
Reverse (-)
65162270 .. 65166463
4194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG491800.1

Sequence Viewer

Length: 2115 bp
ATGGCGCCGTCTTGGTGGTCGAAAGAGGACAGCCACCGAGGGACGCCGGTGGTGGTGAAGATGGAGAACCCGAACTGGTCCATGGTGGAGCTGGAGGGTCCGACCGACGAGGACTTCCTAATGGCGGATTCCCCGAGCCGAGCCCGAGGCAAAAACGCCAAGCAGTTCACTTGGGTCCTCCTCCTCAAGGCCCACCGCGCCGCCGGCTGCCTCACCTCCCTGGGCTCGGCAATGTTGGGCCTGGCCTCCGCCATACGACGCCGCGTCGCATCCGGAAGGACAGACACAGACGCCGACGCCGACGCCGACGCCGACAGCGAGCCACGCGGCGGCGGCGGCGGCAGAGGGCACGAGAACCCGGCGGTGAAGTCGAGATTCTATTTCTGCATCAAGCTGTTTCTGCTGCTCTCTCTGGTTCTGCTGGGGTTTGAGGTCGCCGCGTATTTTAAAGGGTGGCACTTTGGTGGAGCTCCACACCTGCAGCTTCAGTACTTGTGGGAGATGGAGTTTGATGGGGTTAAGGGGGCTTTCGATTGGGTCTATTCCAAATGGGTTTTGATTCGGGTCGAGTATCTCGCTCCGCCGCTTCAGTTTTTGGCCAATGCCTGTATTGTGCTCTTCATGGTTCAGAGCTTGGATAGGTTGATTCTGTGCCTGGGGTGTTTCTGGATCCGGTTCAAGAAGATTAAGCCGGTTCCGAAAGGCGGTCCTTTGGATCTTGAGAATGGCTACTTCCCTATGGTGCTAGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAGTCAATTGGTGCTGTGTGCAATCTAGACTGGCCCAAGTCGAGGTTGTTGGTTCAAGTTCTTGACGATTCGGATGACCCGACTACGCAGTTTATGATCAAAGAGGAGGTCCAGAAATGGCACAAGGAAGGGGCCAACATTTTGTATCGCCACAGAGTGATTAGAGATGGATACAAGGCTGGCAATCTCAAGTCTGCAATGAATTGTAGCTATGTCAAAGACTACGAGTTTGTTGCCATTTTCGACGCTGATTTTCAGCCCGCTCCTGATTTCCTCAAGAGAACAGTCCCACACTTCCAGGACAATGAAGAACTGGCGCTGGTTCAAGCTAGGTGGTCCTTTGTGAACAGGGATGAGAACCTACTCACAAGGTTGCAGAACATTAATTTGACATTCCACTTTGAAGTCGAACAACAAGTAAATAGTGTCTTCATTAATTTCTTTGGGTTCAACGGGACAGCTGGTGTGTGGAGGATAAAGGCTCTCGAGGACTCTGGTGGGTGGTTGGAGAGGACCACTGTTGAGGACATGGATATTGCTGTCCGTGCTCATCTTCATGGCTGGAAATTCATCTTCCTCAATGATGTTGAGTGCCAGTGCGAAGTACCTGAATCTTACGAAGCTTACCGGAAACAACAACACAGATGGCACTCGGGACCTATGCAGTTGTTTCGCCTATGTTTACCCGATATCATCAAATCCAAGATCAGCATTTGGAAGAAATTCAATTTGATTTTCCTCTTCTTTCTGCTCAGAAAGTTGATATTGCCCTTCTATTCTTTCACCCTATTTTGCATAATTCTTCCCATGACAATGTTCATCCCCGAAGCTGAGCTCCCAGCATGGGTTGTGTGCTACATCCCTGCAACCATGTCATTCCTCAATATCCTCCCTGCCCCAAAAGCCTTCCCTTTCATTGTTCCTTACCTTCTCTTTGAAAACACCATGTCAGTGACCAAGTTCAATGCTATGATATCCGGCCTATTCCAGCTCGGGAGTGCATACGAGTGGGTGGTTACCAAGAAGTCTGGGCGTTCCTCAGAGGGTGATCTTGTCTCCTTAGTCGAGAAAGAGCCAAAGCATCAGAGGGGGGTCTCGGTTCCAGACCTTGCCGAAATGAAGGAAGAAATTCGACAGCAGGAGCAAAAGGCCAAGAAGAAGCAGCATAACAGAATATACACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACGGCTTCAGCTCGGAGCCTGCTGTCTGCTCAGGGCATCCATTTCTATTTCTTGTTGTTTCAGGGTATTTCATTCCTGCTGGTTGGTTTAGACTTGATTGGTGAGCAGGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

704

Amino Acids

80.54

Weight (kDa)

6.97

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 246 - 479 2e-15 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 251 - 388 6.7e-12 Glycosyl transferase family 2
Glyco_transf_21 PF13506 335 - 479 1.7e-07 Glycosyl transferase family 21
Glyco_trans_2_3 PF13632 340 - 546 5.3e-22 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014524)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G07960 AT4G07960
fragaria_vesca FvH4_2g32570
malus_domestica MD08G1076900.v1.1 MD15G1064400.v1.1
prunus_persica Prupe.1G418400_v2.0.a1
pyrus_communis pycom08g06370 pycom15g06110
rosa_chinensis RchiOBHm_Chr6g0310111
rosa_laevigata RLG00000010510
rosa_multiflora Rmu_sc0000294.1_g000027
rosa_roxburghii Rroxscaffold_7G00158860
rosa_rugosa Rorug06G0377600
rosa_samantha Rh6BG500800 Rh6CG505900 Rh6DG491800
rosa_wichuraiana Rw6G042760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 486
Acc36I ACCTGC 2 cut(s) 486, 2095
AccB1I GGYRCC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 1049
AccII CGCG 4 cut(s) 198, 264, 327, 440
AccIII TCCGGA 1 cut(s) 272
AclWI GGATC 4 cut(s) 664, 677, 723, 748
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 3 cut(s) 1352, 1508, 1914
AcuI CTGAAG 3 cut(s) 470, 572, 1989
AcyI GRCGYC 7 cut(s) 5, 44, 259, 291, 297, 303, 309
AdeI CACNNNGTG 1 cut(s) 943
AfaI GTAC 2 cut(s) 491, 1392
AfiI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 329, 704, 828, 1630
AgsI TTSAA 8 cut(s) 679, 842, 1112, 1190, 1237, 1513, 1724, 1750
AhdI GACNNNNNGTC 1 cut(s) 263
AjnI CCWGG 4 cut(s) 219, 240, 654, 1083
AleI CACNNNNGTG 1 cut(s) 462
Alw21I GWGCWC 4 cut(s) 472, 618, 1336, 1623
Alw26I GTCTC 2 cut(s) 1846, 1885
AlwI GGATC 4 cut(s) 664, 677, 723, 748
Ama87I CYCGRG 5 cut(s) 133, 144, 1271, 1438, 1778
Aor13HI TCCGGA 1 cut(s) 272
AoxI GGCC 8 cut(s) 189, 238, 243, 597, 818, 918, 1765, 1935
ApeKI GCWGC 4 cut(s) 207, 403, 481, 1948
ApoI RAATTY 3 cut(s) 1352, 1508, 1914
ArsI GACNNNNNNTTYG 4 cut(s) 879, 911, 998, 1030
AseI ATTAAT 2 cut(s) 1170, 1221
Asp700I GAANNNNTTC 2 cut(s) 1508, 1914
AspLEI GCGC 3 cut(s) 7, 200, 1105
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 6 cut(s) 67, 205, 376, 1561, 1844, 2111
AvaI CYCGRG 5 cut(s) 133, 144, 1271, 1438, 1778
AvaII GGWCC 8 cut(s) 78, 98, 175, 707, 895, 1122, 1299, 1442
BaeGI GKGCMC 1 cut(s) 351
BalI TGGCCA 1 cut(s) 599
BamHI GGATCC 1 cut(s) 669
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 4 cut(s) 145, 227, 472, 1623
BauI CACGAG 1 cut(s) 350
BbsI GAAGAC 1 cut(s) 1207
Bbv12I GWGCWC 4 cut(s) 472, 618, 1336, 1623
BbvI GCAGC 4 cut(s) 194, 390, 493, 1960
BccI CCATC 5 cut(s) 55, 496, 506, 947, 1425
BceAI ACGGC 1 cut(s) 2016
BcgI CGANNNNNNTGC 4 cut(s) 1001, 1035, 1439, 1473
BciT130I CCWGG 4 cut(s) 221, 242, 656, 1085
BciVI GTATCC 1 cut(s) 950
BclI TGATCA 1 cut(s) 882
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 2 cut(s) 1846, 1885
BfaI CTAG 3 cut(s) 746, 812, 1116
BfmI CTRYAG 1 cut(s) 479
BfoI RGCGCY 2 cut(s) 8, 1106
BfuAI ACCTGC 2 cut(s) 486, 2095
BfuI GTATCC 1 cut(s) 950
BlpI GCTNAGC 1 cut(s) 1617
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 5 cut(s) 221, 242, 359, 656, 1085
Bme18I GGWCC 8 cut(s) 78, 98, 175, 707, 895, 1122, 1299, 1442
BmeRI GACNNNNNGTC 1 cut(s) 263
BmeT110I CYCGRG 5 cut(s) 133, 144, 1271, 1438, 1778
BmiI GGNNCC 9 cut(s) 6, 99, 176, 671, 696, 919, 1443, 1887, 2015
BmrFI CCNGG 5 cut(s) 221, 242, 359, 656, 1085
BmsI GCATC 4 cut(s) 278, 396, 1876, 2043
BpiI GAAGAC 1 cut(s) 1207
BpmI CTGGAG 1 cut(s) 113
Bpu10I CCTNAGC 1 cut(s) 2028
Bpu1102I GCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 4 cut(s) 170, 740, 959, 1046
BpuMI CCSGG 1 cut(s) 359
BsaHI GRCGYC 7 cut(s) 5, 44, 259, 291, 297, 303, 309
BsaI GGTCTC 1 cut(s) 1885
BsaJI CCNNGG 6 cut(s) 37, 81, 145, 219, 220, 655
BsaWI WCCGGW 3 cut(s) 272, 672, 1413
BsaXI ACNNNNNCTCC 2 cut(s) 491, 521
Bsc4I CCNNNNNNNGG 7 cut(s) 124, 187, 226, 329, 704, 828, 1630
Bse118I RCCGGY 3 cut(s) 46, 203, 691
Bse1I ACTGG 4 cut(s) 80, 821, 1104, 1381
Bse3DI GCAATG 3 cut(s) 237, 772, 990
BseAI TCCGGA 1 cut(s) 272
BseBI CCWGG 4 cut(s) 221, 242, 656, 1085
BseDI CCNNGG 6 cut(s) 37, 81, 145, 219, 220, 655
BseGI GGATG 6 cut(s) 269, 865, 1144, 1605, 1644, 2034
BseLI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 329, 704, 828, 1630
BseMI GCAATG 3 cut(s) 237, 772, 990
BseMII CTCAG 4 cut(s) 1552, 1608, 1839, 2042
BseNI ACTGG 4 cut(s) 80, 821, 1104, 1381
BseRI GAGGAG 3 cut(s) 170, 173, 905
BseSI GKGCMC 1 cut(s) 351
BseXI GCAGC 4 cut(s) 194, 390, 493, 1960
BseYI CCCAGC 2 cut(s) 421, 1624
Bsh1236I CGCG 4 cut(s) 198, 264, 327, 440
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 8 cut(s) 191, 240, 245, 599, 820, 920, 1767, 1937
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 4 cut(s) 472, 618, 1336, 1623
BsiHKCI CYCGRG 5 cut(s) 133, 144, 1271, 1438, 1778
BsiSI CCGG 8 cut(s) 47, 204, 273, 359, 673, 692, 1414, 1764
BslFI GGGAC 4 cut(s) 55, 1058, 1255, 1455
BslI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 329, 704, 828, 1630
BsmAI GTCTC 2 cut(s) 1846, 1885
BsmFI GGGAC 4 cut(s) 55, 1058, 1255, 1455
BsnI GGCC 8 cut(s) 191, 240, 245, 599, 820, 920, 1767, 1937
Bso31I GGTCTC 1 cut(s) 1885
BsoBI CYCGRG 5 cut(s) 133, 144, 1271, 1438, 1778
Bsp1286I GDGCHC 7 cut(s) 145, 227, 351, 472, 618, 1336, 1623
Bsp13I TCCGGA 1 cut(s) 272
Bsp143I GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
Bsp1720I GCTNAGC 1 cut(s) 1617
Bsp19I CCATGG 1 cut(s) 81
BspANI GGCC 8 cut(s) 191, 240, 245, 599, 820, 920, 1767, 1937
BspCNI CTCAG 4 cut(s) 1551, 1609, 1838, 2041
BspEI TCCGGA 1 cut(s) 272
BspFNI CGCG 4 cut(s) 198, 264, 327, 440
BspLI GGNNCC 9 cut(s) 6, 99, 176, 671, 696, 919, 1443, 1887, 2015
BspMAI CTGCAG 1 cut(s) 483
BspMI ACCTGC 2 cut(s) 486, 2095
BspPI GGATC 4 cut(s) 664, 677, 723, 748
BspQI GCTCTTC 1 cut(s) 623
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 1885
BsrBI CCGCTC 1 cut(s) 1049
BsrDI GCAATG 3 cut(s) 237, 772, 990
BsrFI RCCGGY 3 cut(s) 46, 203, 691
BsrI ACTGG 4 cut(s) 80, 821, 1104, 1381
BssAI RCCGGY 3 cut(s) 46, 203, 691
BssECI CCNNGG 6 cut(s) 37, 81, 145, 219, 220, 655
BssMI GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
BssNI GRCGYC 7 cut(s) 5, 44, 259, 291, 297, 303, 309
BssSI CACGAG 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 81
Bst2BI CACGAG 1 cut(s) 350
Bst2UI CCWGG 4 cut(s) 221, 242, 656, 1085
Bst4CI ACNGT 2 cut(s) 1072, 1306
Bst6I CTCTTC 2 cut(s) 623, 1532
BstACI GRCGYC 7 cut(s) 5, 44, 259, 291, 297, 303, 309
BstC8I GCNNGC 6 cut(s) 205, 320, 967, 1047, 1977, 2018
BstDEI CTNAG 5 cut(s) 1538, 1617, 1825, 1846, 2028
BstDSI CCRYGG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 1801
BstENI CCTNNNNNAGG 1 cut(s) 185
BstF5I GGATG 6 cut(s) 269, 865, 1144, 1605, 1644, 2034
BstFNI CGCG 4 cut(s) 198, 264, 327, 440
BstH2I RGCGCY 2 cut(s) 8, 1106
BstHHI GCGC 3 cut(s) 7, 200, 1105
BstKTI GATC 6 cut(s) 672, 718, 756, 885, 1494, 1837
BstMAI GTCTC 2 cut(s) 1846, 1885
BstMBI GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 9 cut(s) 197, 204, 324, 333, 336, 339, 400, 1331, 1688
BstNI CCWGG 4 cut(s) 221, 242, 656, 1085
BstPI GGTNACC 1 cut(s) 1801
BstSCI CCNGG 5 cut(s) 219, 240, 357, 654, 1083
BstSFI CTRYAG 1 cut(s) 479
BstSLI GKGCMC 1 cut(s) 351
BstUI CGCG 4 cut(s) 198, 264, 327, 440
BstV1I GCAGC 4 cut(s) 194, 390, 493, 1960
BstV2I GAAGAC 1 cut(s) 1207
BstX2I RGATCY 3 cut(s) 669, 715, 753
BstYI RGATCY 3 cut(s) 669, 715, 753
BsuI GTATCC 1 cut(s) 950
BsuRI GGCC 8 cut(s) 191, 240, 245, 599, 820, 920, 1767, 1937
BtgI CCRYGG 1 cut(s) 81
BtsCI GGATG 6 cut(s) 269, 865, 1144, 1605, 1644, 2034
BtsIMutI CAGTG 3 cut(s) 1302, 1388, 1743
BveI ACCTGC 2 cut(s) 486, 2095
Cac8I GCNNGC 6 cut(s) 205, 320, 967, 1047, 1977, 2018
CfoI GCGC 3 cut(s) 7, 200, 1105
Cfr10I RCCGGY 3 cut(s) 46, 203, 691
CseI GACGC 8 cut(s) 52, 253, 267, 299, 305, 311, 317, 1040
Csp6I GTAC 2 cut(s) 490, 1391
CspCI CAANNNNNGTGG 2 cut(s) 1100, 1135
CviAII CATG 9 cut(s) 82, 622, 760, 1315, 1343, 1594, 1629, 1657, 1732
CviQI GTAC 2 cut(s) 490, 1391
DdeI CTNAG 5 cut(s) 1538, 1617, 1825, 1846, 2028
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 671, 717, 755, 884, 1493, 1836
DpnII GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
DraI TTTAAA 1 cut(s) 448
DraIII CACNNNGTG 1 cut(s) 943
DriI GACNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 2 cut(s) 623, 1532
Eam1105I GACNNNNNGTC 1 cut(s) 263
EarI CTCTTC 2 cut(s) 623, 1532
EciI GGCGGA 3 cut(s) 140, 238, 570
Ecl136II GAGCTC 2 cut(s) 470, 1621
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 4 cut(s) 145, 227, 472, 1623
Eco31I GGTCTC 1 cut(s) 1885
Eco32I GATATC 2 cut(s) 1477, 1761
Eco47I GGWCC 8 cut(s) 78, 98, 175, 707, 895, 1122, 1299, 1442
Eco53kI GAGCTC 2 cut(s) 470, 1621
Eco57I CTGAAG 3 cut(s) 470, 572, 1989
Eco88I CYCGRG 5 cut(s) 133, 144, 1271, 1438, 1778
Eco91I GGTNACC 1 cut(s) 1801
EcoICRI GAGCTC 2 cut(s) 470, 1621
EcoNI CCTNNNNNAGG 1 cut(s) 185
EcoO109I RGGNCCY 2 cut(s) 175, 1442
EcoO65I GGTNACC 1 cut(s) 1801
EcoRII CCWGG 4 cut(s) 219, 240, 654, 1083
EcoRV GATATC 2 cut(s) 1477, 1761
EcoT14I CCWWGG 1 cut(s) 81
EcoT38I GRGCYC 4 cut(s) 145, 227, 472, 1623
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 9 cut(s) 85, 625, 763, 1318, 1346, 1597, 1632, 1660, 1735
FaqI GGGAC 4 cut(s) 55, 1058, 1255, 1455
FatI CATG 9 cut(s) 81, 621, 759, 1314, 1342, 1593, 1628, 1656, 1731
FauI CCCGC 1 cut(s) 1054
FbaI TGATCA 1 cut(s) 882
FokI GGATG 6 cut(s) 256, 872, 1151, 1592, 1631, 2021
FriOI GRGCYC 4 cut(s) 145, 227, 472, 1623
FspBI CTAG 3 cut(s) 746, 812, 1116
GlaI GCGC 3 cut(s) 6, 199, 1104
GsaI CCCAGC 2 cut(s) 425, 1628
GsuI CTGGAG 1 cut(s) 113
HaeII RGCGCY 2 cut(s) 8, 1106
HaeIII GGCC 8 cut(s) 191, 240, 245, 599, 820, 920, 1767, 1937
HapII CCGG 8 cut(s) 47, 204, 273, 359, 673, 692, 1414, 1764
HgaI GACGC 8 cut(s) 52, 253, 267, 299, 305, 311, 317, 1040
HhaI GCGC 3 cut(s) 7, 200, 1105
Hin1I GRCGYC 7 cut(s) 5, 44, 259, 291, 297, 303, 309
Hin1II CATG 9 cut(s) 85, 625, 763, 1318, 1346, 1597, 1632, 1660, 1735
Hin6I GCGC 3 cut(s) 5, 198, 1103
HinP1I GCGC 3 cut(s) 5, 198, 1103
HindIII AAGCTT 1 cut(s) 1407
HinfI GANTC 7 cut(s) 128, 375, 559, 646, 854, 1277, 1397
HpaII CCGG 8 cut(s) 47, 204, 273, 359, 673, 692, 1414, 1764
HphI GGTGA 6 cut(s) 67, 205, 376, 1561, 1844, 2111
Hpy166II GTNNAC 3 cut(s) 168, 1132, 1469
Hpy188I TCNGA 9 cut(s) 102, 630, 699, 753, 859, 1541, 1828, 1872, 2013
Hpy8I GTNNAC 3 cut(s) 168, 1132, 1469
Hpy99I CGWCG 7 cut(s) 110, 261, 269, 299, 305, 311, 1034
HpyAV CCTTC 7 cut(s) 270, 908, 1567, 1702, 1724, 1900, 2000
HpyCH4III ACNGT 2 cut(s) 1072, 1306
HpyF10VI GCNNNNNNNGC 9 cut(s) 197, 204, 324, 333, 336, 339, 400, 1331, 1688
HpyF3I CTNAG 5 cut(s) 1538, 1617, 1825, 1846, 2028
Hsp92I GRCGYC 7 cut(s) 5, 44, 259, 291, 297, 303, 309
Hsp92II CATG 9 cut(s) 85, 625, 763, 1318, 1346, 1597, 1632, 1660, 1735
HspAI GCGC 3 cut(s) 5, 198, 1103
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 272
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 882
Kzo9I GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
LguI GCTCTTC 1 cut(s) 623
LmnI GCTCC 9 cut(s) 88, 467, 475, 583, 1054, 1626, 1927, 1972, 2013
Lsp1109I GCAGC 4 cut(s) 194, 390, 493, 1960
LweI GCATC 4 cut(s) 278, 396, 1876, 2043
MaeI CTAG 3 cut(s) 746, 812, 1116
MaeIII GTNAC 2 cut(s) 1738, 1801
MalI GATC 6 cut(s) 671, 717, 755, 884, 1493, 1836
MbiI CCGCTC 1 cut(s) 1049
MboI GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
MfeI CAATTG 1 cut(s) 792
MflI RGATCY 3 cut(s) 669, 715, 753
MhlI GDGCHC 7 cut(s) 145, 227, 351, 472, 618, 1336, 1623
MlsI TGGCCA 1 cut(s) 599
MluCI AATT 9 cut(s) 792, 988, 1171, 1222, 1352, 1508, 1513, 1584, 1914
MluNI TGGCCA 1 cut(s) 599
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1271
MmeI TCCRAC 2 cut(s) 125, 1272
Mox20I TGGCCA 1 cut(s) 599
MroI TCCGGA 1 cut(s) 272
MroNI GCCGGC 1 cut(s) 203
MroXI GAANNNNTTC 2 cut(s) 1508, 1914
MscI TGGCCA 1 cut(s) 599
MseI TTAA 5 cut(s) 447, 519, 687, 1170, 1221
MslI CAYNNNNRTG 5 cut(s) 462, 1341, 1598, 1736, 1792
Msp20I TGGCCA 1 cut(s) 599
MspA1I CMGCKG 1 cut(s) 1247
MspI CCGG 8 cut(s) 47, 204, 273, 359, 673, 692, 1414, 1764
MspR9I CCNGG 5 cut(s) 221, 242, 359, 656, 1085
MunI CAATTG 1 cut(s) 792
MvaI CCWGG 4 cut(s) 221, 242, 656, 1085
MvnI CGCG 4 cut(s) 198, 264, 327, 440
MwoI GCNNNNNNNGC 9 cut(s) 197, 204, 324, 333, 336, 339, 400, 1331, 1688
NaeI GCCGGC 1 cut(s) 205
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 359
NcoI CCATGG 1 cut(s) 81
NdeII GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
NgoMIV GCCGGC 1 cut(s) 203
NlaIII CATG 9 cut(s) 85, 625, 763, 1318, 1346, 1597, 1632, 1660, 1735
NlaIV GGNNCC 9 cut(s) 6, 99, 176, 671, 696, 919, 1443, 1887, 2015
NmeAIII GCCGAG 2 cut(s) 164, 206
NmuCI GTSAC 1 cut(s) 1738
OliI CACNNNNGTG 1 cut(s) 462
PaeR7I CTCGAG 1 cut(s) 1271
PaqCI CACCTGC 1 cut(s) 486
PasI CCCWGGG 1 cut(s) 220
PciSI GCTCTTC 1 cut(s) 623
PcsI WCGNNNNNNNCGW 5 cut(s) 297, 303, 309, 315, 863
PdiI GCCGGC 1 cut(s) 205
PdmI GAANNNNTTC 2 cut(s) 1508, 1914
PfeI GAWTC 6 cut(s) 128, 375, 559, 646, 854, 1397
PfoI TCCNGGA 1 cut(s) 1083
PleI GAGTC 1 cut(s) 1271
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 1271
PpuMI RGGWCCY 2 cut(s) 175, 1442
PshBI ATTAAT 2 cut(s) 1170, 1221
Psp124BI GAGCTC 2 cut(s) 472, 1623
Psp5II RGGWCCY 2 cut(s) 175, 1442
Psp6I CCWGG 4 cut(s) 219, 240, 654, 1083
PspEI GGTNACC 1 cut(s) 1801
PspFI CCCAGC 2 cut(s) 421, 1624
PspGI CCWGG 4 cut(s) 219, 240, 654, 1083
PspN4I GGNNCC 9 cut(s) 6, 99, 176, 671, 696, 919, 1443, 1887, 2015
PspPPI RGGWCCY 2 cut(s) 175, 1442
PstI CTGCAG 1 cut(s) 483
PsuI RGATCY 3 cut(s) 669, 715, 753
PvuII CAGCTG 1 cut(s) 1247
RsaI GTAC 2 cut(s) 491, 1392
RsaNI GTAC 2 cut(s) 490, 1391
RseI CAYNNNNRTG 5 cut(s) 462, 1341, 1598, 1736, 1792
SacI GAGCTC 2 cut(s) 472, 1623
SapI GCTCTTC 1 cut(s) 623
SaqAI TTAA 5 cut(s) 447, 519, 687, 1170, 1221
Sau3AI GATC 6 cut(s) 669, 715, 753, 882, 1491, 1834
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 1 cut(s) 1271
ScrFI CCNGG 5 cut(s) 221, 242, 359, 656, 1085
SduI GDGCHC 7 cut(s) 145, 227, 351, 472, 618, 1336, 1623
SfaNI GCATC 4 cut(s) 278, 396, 1876, 2043
SfcI CTRYAG 1 cut(s) 479
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 1271
SgrAI CRCCGGYG 1 cut(s) 46
SinI GGWCC 8 cut(s) 78, 98, 175, 707, 895, 1122, 1299, 1442
SlaI CTCGAG 1 cut(s) 1271
SmiMI CAYNNNNRTG 5 cut(s) 462, 1341, 1598, 1736, 1792
SmlI CTYRAG 5 cut(s) 185, 719, 974, 1061, 1271
SmoI CTYRAG 5 cut(s) 185, 719, 974, 1061, 1271
Sse9I AATT 9 cut(s) 792, 988, 1171, 1222, 1352, 1508, 1513, 1584, 1914
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 3 cut(s) 746, 812, 1116
SstI GAGCTC 2 cut(s) 472, 1623
StyD4I CCNGG 5 cut(s) 219, 240, 357, 654, 1083
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 1072, 1306
TaqII GACCGA 1 cut(s) 119
TasI AATT 9 cut(s) 792, 988, 1171, 1222, 1352, 1508, 1513, 1584, 1914
TatI WGTACW 1 cut(s) 489
TauI GCSGC 9 cut(s) 203, 264, 330, 333, 336, 339, 342, 440, 586
TfiI GAWTC 6 cut(s) 128, 375, 559, 646, 854, 1397
Tru1I TTAA 5 cut(s) 447, 519, 687, 1170, 1221
Tru9I TTAA 5 cut(s) 447, 519, 687, 1170, 1221
TscAI CASTG 3 cut(s) 1309, 1388, 1743
TseFI GTSAC 1 cut(s) 1738
TseI GCWGC 4 cut(s) 207, 403, 481, 1948
Tsp45I GTSAC 1 cut(s) 1738
TspGWI ACGGA 1 cut(s) 1319
TspRI CASTG 3 cut(s) 1309, 1388, 1743
VpaK11BI GGWCC 8 cut(s) 78, 98, 175, 707, 895, 1122, 1299, 1442
VspI ATTAAT 2 cut(s) 1170, 1221
XagI CCTNNNNNAGG 1 cut(s) 185
XapI RAATTY 3 cut(s) 1352, 1508, 1914
XbaI TCTAGA 1 cut(s) 811
XcmI CCANNNNNNNNNTGG 1 cut(s) 88
XhoI CTCGAG 1 cut(s) 1271
XmnI GAANNNNTTC 2 cut(s) 1508, 1914
XspI CTAG 3 cut(s) 746, 812, 1116
ZrmI AGTACT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.