Rh6CG505900

xyloglucan glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0014524
Physical Location & Seq
Reverse (-)
66752988 .. 66757318
4331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG505900.1

Sequence Viewer

Length: 2100 bp
ATGGCGCCGTCTTGGTGGTCGAAAGAGGACAGCCACCGAGGGACGCCGGTGGTGGTGAAGATGGAGAACCCGAACTGGTCCATGGTGGAGCTGGAGGGTCCGACCGACGAGGACTTCCTAATGGCGGATTCCCCGAGCCGAGCCCGAGGCAAAAACGCCAAGCAGTTCACTTGGGTCCTCCTCCTCAAGGCCCACCGCGCCGCCGGCTGCCTCACCTCCCTGGGCTCGGCAATGTTGGGCCTGGCCTCCGCCATACGACGCCGCGTCGCATCCGGAAGGACAGACACAGACGCCGACGCCGACAGCGAGCCACGCGGCGGCGGCGGCAGAGGGCACGAGAACCCGGCGGTGAAGTCGAGATTCTATTTCTGCATCAAGCTGTTTCTGCTGCTCTCTCTGGTTCTGCTGGGGTTTGAGGTCGCCGCGTATTTTAAAGGGTGGCACTTTGGTGGAGCTCCACACCTGCAGCTTCAGTACTTGTGGGAGATGGAGTTTGATGGGGTTAAGGGGGCTTTCGATTGGGTCTATTCCAAATGGGTTTTGATTCGGGTCGAGTATCTCGCTCCGCCGCTTCAGTTTTTGGCCAATGCCTGTATTGTGCTCTTCATGGTTCAGAGCTTGGATAGGTTGATTCTGTGCCTGGGGTGTTTCTGGATCCGGTTCAAGAAGATTAAGCCGGTTCCGAAAGGCGGTCCTTTGGATCTTGAGAATGGCTACTTCCCTATGGTGCTAGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAGTCAATTGGTGCTGTGTGCAATCTAGACTGGCCCAAGTCGAGGTTGTTGGTTCAAGTTCTTGACGATTCGGATGACCCGACTACGCAGTTTATGATCAAAGAGGAGGTCCAGAAATGGCACAAGGAAGGGGCCAACATTTTGTATCGGCACAGAGTGATTAGAGATGGATACAAGGCTGGCAATCTCAAGTCTGCAATGAATTGTAGCTATGTCAAAGACTACGAGTTTGTTGCCATTTTCGACGCTGATTTTCAGCCCGCTCCTGATTTCCTCAAGAGAACAGTCCCACACTTCCAGGACAATGAAGAACTGGCGCTGGTCCAAGCTAGGTGGTCCTTTGTGAACAGGGATGAGAACCTACTCACAAGGTTGCAGAACATTAATTTGACATTCCACTTTGAAGTCGAACAACAAGTAAATAGTGTCTTCATTAATTTCTTTGGGTTCAACGGGACAGCTGGTGTGTGGAGGATAAAGGCTCTCGAGGACTCTGGTGGGTGGTTGGAGAGGACCACTGTTGAGGACATGGATATTGCTGTCCGTGCTCATCTTCATGGCTGGAAATTCATCTTCCTCAATGATGTTGAGTGCCAGTGCGAAGTACCTGAATCTTACGAAGCTTACCGGAAACAACAACACAGATGGCACTCGGGACCTATGCAGTTGTTTCGCCTATGTTTACCCGATATCATCAAATCCAAGATCAGCATTTGGAAGAAATTCAATTTGATTTTCCTCTTCTTTCTGCTCAGAAAGTTGATATTGCCCTTCTATTCTTTCACCCTATTTTGCATAATTCTTCCCATGACAATGTTCATCCCCGAAGCTGAGCTCCCAGCATGGGTTGTGTGCTACATCCCTGCAACCATGTCATTCCTCAATATCCTCCCTGCCCCAAAAGCCTTCCCTTTCATTGTTCCTTACCTTCTCTTTGAAAACACCATGTCAGTGACCAAGTTCAATGCTATGATATCCGGCCTATTCCAGCTCGGGAGTGCATACGAGTGGGTGGTTACCAAGAAGTCTGGGCGTTCCTCAGAGGGTGATCTTGTCTCCTTAGTCGAGAAAGAGCCAAAGCATCAGAGGGGGGTCTCGGTTCCAGACCTTGCCGAAATGAAGGAAGAAATTCGACAGCAGGAGCAAAAGGCCAAGAAGAAGAAGCATAACAGAATATACACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACGGCTTCAGCTCGGAGCCTGCTGTCTGCTCAGGGCATCCATTTCTATTTCTTGTTGTTTCAGGGTATTTCATTCCTGCTGGTTGGTTTAGACTTGATTGGTGAGCAGGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

699

Amino Acids

80.11

Weight (kDa)

7.87

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 241 - 474 1.9e-15 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 246 - 383 6.6e-12 Glycosyl transferase family 2
Glyco_transf_21 PF13506 330 - 474 1.7e-07 Glycosyl transferase family 21
Glyco_trans_2_3 PF13632 335 - 541 5.2e-22 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014524)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G07960 AT4G07960
fragaria_vesca FvH4_2g32570
malus_domestica MD08G1076900.v1.1 MD15G1064400.v1.1
prunus_persica Prupe.1G418400_v2.0.a1
pyrus_communis pycom08g06370 pycom15g06110
rosa_chinensis RchiOBHm_Chr6g0310111
rosa_laevigata RLG00000010510
rosa_multiflora Rmu_sc0000294.1_g000027
rosa_roxburghii Rroxscaffold_7G00158860
rosa_rugosa Rorug06G0377600
rosa_samantha Rh6BG500800 Rh6CG505900 Rh6DG491800
rosa_wichuraiana Rw6G042760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 471
Acc36I ACCTGC 2 cut(s) 471, 2080
AccB1I GGYRCC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 1034
AccII CGCG 4 cut(s) 198, 264, 315, 425
AccIII TCCGGA 1 cut(s) 272
AclWI GGATC 4 cut(s) 649, 662, 708, 733
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 3 cut(s) 1337, 1493, 1899
AcuI CTGAAG 3 cut(s) 455, 557, 1974
AcyI GRCGYC 5 cut(s) 5, 44, 259, 291, 297
AdeI CACNNNGTG 1 cut(s) 928
AfaI GTAC 2 cut(s) 476, 1377
AfiI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
AgsI TTSAA 7 cut(s) 664, 827, 1175, 1222, 1498, 1709, 1735
AhdI GACNNNNNGTC 1 cut(s) 263
AjnI CCWGG 4 cut(s) 219, 240, 639, 1068
AleI CACNNNNGTG 1 cut(s) 447
Alw21I GWGCWC 4 cut(s) 457, 603, 1321, 1608
Alw26I GTCTC 2 cut(s) 1831, 1870
AlwI GGATC 4 cut(s) 649, 662, 708, 733
Ama87I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Aor13HI TCCGGA 1 cut(s) 272
AoxI GGCC 8 cut(s) 189, 238, 243, 582, 803, 903, 1750, 1920
ApeKI GCWGC 3 cut(s) 207, 388, 466
ApoI RAATTY 3 cut(s) 1337, 1493, 1899
ArsI GACNNNNNNTTYG 4 cut(s) 864, 896, 983, 1015
AseI ATTAAT 2 cut(s) 1155, 1206
Asp700I GAANNNNTTC 2 cut(s) 1493, 1899
AspLEI GCGC 3 cut(s) 7, 200, 1090
AsuC2I CCSGG 1 cut(s) 344
AsuHPI GGTGA 6 cut(s) 67, 205, 361, 1546, 1829, 2096
AvaI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
AvaII GGWCC 9 cut(s) 78, 98, 175, 692, 880, 1093, 1107, 1284, 1427
BaeGI GKGCMC 1 cut(s) 336
BalI TGGCCA 1 cut(s) 584
BamHI GGATCC 1 cut(s) 654
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 4 cut(s) 145, 227, 457, 1608
BauI CACGAG 1 cut(s) 335
BbsI GAAGAC 1 cut(s) 1192
Bbv12I GWGCWC 4 cut(s) 457, 603, 1321, 1608
BbvI GCAGC 3 cut(s) 194, 375, 478
BccI CCATC 5 cut(s) 55, 481, 491, 932, 1410
BceAI ACGGC 1 cut(s) 2001
BcgI CGANNNNNNTGC 4 cut(s) 986, 1020, 1424, 1458
BciT130I CCWGG 4 cut(s) 221, 242, 641, 1070
BciVI GTATCC 1 cut(s) 935
BclI TGATCA 1 cut(s) 867
BcnI CCSGG 1 cut(s) 344
BcoDI GTCTC 2 cut(s) 1831, 1870
BfaI CTAG 3 cut(s) 731, 797, 1101
BfmI CTRYAG 1 cut(s) 464
BfoI RGCGCY 2 cut(s) 8, 1091
BfuAI ACCTGC 2 cut(s) 471, 2080
BfuI GTATCC 1 cut(s) 935
BlpI GCTNAGC 1 cut(s) 1602
BmcAI AGTACT 1 cut(s) 476
Bme1390I CCNGG 5 cut(s) 221, 242, 344, 641, 1070
Bme18I GGWCC 9 cut(s) 78, 98, 175, 692, 880, 1093, 1107, 1284, 1427
BmeRI GACNNNNNGTC 1 cut(s) 263
BmeT110I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
BmiI GGNNCC 9 cut(s) 6, 99, 176, 656, 681, 904, 1428, 1872, 2000
BmrFI CCNGG 5 cut(s) 221, 242, 344, 641, 1070
BmsI GCATC 4 cut(s) 278, 381, 1861, 2028
BpiI GAAGAC 1 cut(s) 1192
BpmI CTGGAG 1 cut(s) 113
Bpu10I CCTNAGC 1 cut(s) 2013
Bpu1102I GCTNAGC 1 cut(s) 1602
BpuEI CTTGAG 4 cut(s) 170, 725, 944, 1031
BpuMI CCSGG 1 cut(s) 344
BsaHI GRCGYC 5 cut(s) 5, 44, 259, 291, 297
BsaI GGTCTC 1 cut(s) 1870
BsaJI CCNNGG 6 cut(s) 37, 81, 145, 219, 220, 640
BsaWI WCCGGW 3 cut(s) 272, 657, 1398
BsaXI ACNNNNNCTCC 2 cut(s) 476, 506
Bsc4I CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
Bse118I RCCGGY 3 cut(s) 46, 203, 676
Bse1I ACTGG 4 cut(s) 80, 806, 1089, 1366
Bse3DI GCAATG 3 cut(s) 237, 757, 975
BseAI TCCGGA 1 cut(s) 272
BseBI CCWGG 4 cut(s) 221, 242, 641, 1070
BseDI CCNNGG 6 cut(s) 37, 81, 145, 219, 220, 640
BseGI GGATG 6 cut(s) 269, 850, 1129, 1590, 1629, 2019
BseLI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
BseMI GCAATG 3 cut(s) 237, 757, 975
BseMII CTCAG 4 cut(s) 1537, 1593, 1824, 2027
BseNI ACTGG 4 cut(s) 80, 806, 1089, 1366
BseRI GAGGAG 3 cut(s) 170, 173, 890
BseSI GKGCMC 1 cut(s) 336
BseXI GCAGC 3 cut(s) 194, 375, 478
BseYI CCCAGC 2 cut(s) 406, 1609
Bsh1236I CGCG 4 cut(s) 198, 264, 315, 425
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 8 cut(s) 191, 240, 245, 584, 805, 905, 1752, 1922
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 4 cut(s) 457, 603, 1321, 1608
BsiHKCI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
BsiSI CCGG 8 cut(s) 47, 204, 273, 344, 658, 677, 1399, 1749
BslFI GGGAC 4 cut(s) 55, 1043, 1240, 1440
BslI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
BsmAI GTCTC 2 cut(s) 1831, 1870
BsmFI GGGAC 4 cut(s) 55, 1043, 1240, 1440
BsnI GGCC 8 cut(s) 191, 240, 245, 584, 805, 905, 1752, 1922
Bso31I GGTCTC 1 cut(s) 1870
BsoBI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Bsp1286I GDGCHC 7 cut(s) 145, 227, 336, 457, 603, 1321, 1608
Bsp13I TCCGGA 1 cut(s) 272
Bsp143I GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
Bsp1720I GCTNAGC 1 cut(s) 1602
Bsp19I CCATGG 1 cut(s) 81
BspANI GGCC 8 cut(s) 191, 240, 245, 584, 805, 905, 1752, 1922
BspCNI CTCAG 4 cut(s) 1536, 1594, 1823, 2026
BspEI TCCGGA 1 cut(s) 272
BspFNI CGCG 4 cut(s) 198, 264, 315, 425
BspLI GGNNCC 9 cut(s) 6, 99, 176, 656, 681, 904, 1428, 1872, 2000
BspMAI CTGCAG 1 cut(s) 468
BspMI ACCTGC 2 cut(s) 471, 2080
BspPI GGATC 4 cut(s) 649, 662, 708, 733
BspQI GCTCTTC 1 cut(s) 608
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 1870
BsrBI CCGCTC 1 cut(s) 1034
BsrDI GCAATG 3 cut(s) 237, 757, 975
BsrFI RCCGGY 3 cut(s) 46, 203, 676
BsrI ACTGG 4 cut(s) 80, 806, 1089, 1366
BssAI RCCGGY 3 cut(s) 46, 203, 676
BssECI CCNNGG 6 cut(s) 37, 81, 145, 219, 220, 640
BssMI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
BssNI GRCGYC 5 cut(s) 5, 44, 259, 291, 297
BssSI CACGAG 1 cut(s) 335
BssT1I CCWWGG 1 cut(s) 81
Bst2BI CACGAG 1 cut(s) 335
Bst2UI CCWGG 4 cut(s) 221, 242, 641, 1070
Bst4CI ACNGT 2 cut(s) 1057, 1291
Bst6I CTCTTC 2 cut(s) 608, 1517
BstACI GRCGYC 5 cut(s) 5, 44, 259, 291, 297
BstC8I GCNNGC 6 cut(s) 205, 308, 952, 1032, 1962, 2003
BstDEI CTNAG 5 cut(s) 1523, 1602, 1810, 1831, 2013
BstDSI CCRYGG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 1786
BstENI CCTNNNNNAGG 1 cut(s) 185
BstF5I GGATG 6 cut(s) 269, 850, 1129, 1590, 1629, 2019
BstFNI CGCG 4 cut(s) 198, 264, 315, 425
BstH2I RGCGCY 2 cut(s) 8, 1091
BstHHI GCGC 3 cut(s) 7, 200, 1090
BstKTI GATC 6 cut(s) 657, 703, 741, 870, 1479, 1822
BstMAI GTCTC 2 cut(s) 1831, 1870
BstMBI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 8 cut(s) 197, 204, 312, 321, 324, 385, 1316, 1673
BstNI CCWGG 4 cut(s) 221, 242, 641, 1070
BstPI GGTNACC 1 cut(s) 1786
BstSCI CCNGG 5 cut(s) 219, 240, 342, 639, 1068
BstSFI CTRYAG 1 cut(s) 464
BstSLI GKGCMC 1 cut(s) 336
BstUI CGCG 4 cut(s) 198, 264, 315, 425
BstV1I GCAGC 3 cut(s) 194, 375, 478
BstV2I GAAGAC 1 cut(s) 1192
BstX2I RGATCY 3 cut(s) 654, 700, 738
BstYI RGATCY 3 cut(s) 654, 700, 738
BsuI GTATCC 1 cut(s) 935
BsuRI GGCC 8 cut(s) 191, 240, 245, 584, 805, 905, 1752, 1922
BtgI CCRYGG 1 cut(s) 81
BtsCI GGATG 6 cut(s) 269, 850, 1129, 1590, 1629, 2019
BtsIMutI CAGTG 3 cut(s) 1287, 1373, 1728
BveI ACCTGC 2 cut(s) 471, 2080
Cac8I GCNNGC 6 cut(s) 205, 308, 952, 1032, 1962, 2003
CfoI GCGC 3 cut(s) 7, 200, 1090
Cfr10I RCCGGY 3 cut(s) 46, 203, 676
CseI GACGC 6 cut(s) 52, 253, 267, 299, 305, 1025
Csp6I GTAC 2 cut(s) 475, 1376
CspCI CAANNNNNGTGG 2 cut(s) 1085, 1120
CviAII CATG 9 cut(s) 82, 607, 745, 1300, 1328, 1579, 1614, 1642, 1717
CviQI GTAC 2 cut(s) 475, 1376
DdeI CTNAG 5 cut(s) 1523, 1602, 1810, 1831, 2013
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 656, 702, 740, 869, 1478, 1821
DpnII GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
DraI TTTAAA 1 cut(s) 433
DraIII CACNNNGTG 1 cut(s) 928
DriI GACNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 2 cut(s) 608, 1517
Eam1105I GACNNNNNGTC 1 cut(s) 263
EarI CTCTTC 2 cut(s) 608, 1517
EciI GGCGGA 3 cut(s) 140, 238, 555
Ecl136II GAGCTC 2 cut(s) 455, 1606
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 4 cut(s) 145, 227, 457, 1608
Eco31I GGTCTC 1 cut(s) 1870
Eco32I GATATC 2 cut(s) 1462, 1746
Eco47I GGWCC 9 cut(s) 78, 98, 175, 692, 880, 1093, 1107, 1284, 1427
Eco53kI GAGCTC 2 cut(s) 455, 1606
Eco57I CTGAAG 3 cut(s) 455, 557, 1974
Eco88I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Eco91I GGTNACC 1 cut(s) 1786
EcoICRI GAGCTC 2 cut(s) 455, 1606
EcoNI CCTNNNNNAGG 1 cut(s) 185
EcoO109I RGGNCCY 2 cut(s) 175, 1427
EcoO65I GGTNACC 1 cut(s) 1786
EcoRII CCWGG 4 cut(s) 219, 240, 639, 1068
EcoRV GATATC 2 cut(s) 1462, 1746
EcoT14I CCWWGG 1 cut(s) 81
EcoT38I GRGCYC 4 cut(s) 145, 227, 457, 1608
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
FaqI GGGAC 4 cut(s) 55, 1043, 1240, 1440
FatI CATG 9 cut(s) 81, 606, 744, 1299, 1327, 1578, 1613, 1641, 1716
FauI CCCGC 1 cut(s) 1039
FbaI TGATCA 1 cut(s) 867
FokI GGATG 6 cut(s) 256, 857, 1136, 1577, 1616, 2006
FriOI GRGCYC 4 cut(s) 145, 227, 457, 1608
FspBI CTAG 3 cut(s) 731, 797, 1101
GlaI GCGC 3 cut(s) 6, 199, 1089
GsaI CCCAGC 2 cut(s) 410, 1613
GsuI CTGGAG 1 cut(s) 113
HaeII RGCGCY 2 cut(s) 8, 1091
HaeIII GGCC 8 cut(s) 191, 240, 245, 584, 805, 905, 1752, 1922
HapII CCGG 8 cut(s) 47, 204, 273, 344, 658, 677, 1399, 1749
HgaI GACGC 6 cut(s) 52, 253, 267, 299, 305, 1025
HhaI GCGC 3 cut(s) 7, 200, 1090
Hin1I GRCGYC 5 cut(s) 5, 44, 259, 291, 297
Hin1II CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
Hin6I GCGC 3 cut(s) 5, 198, 1088
HinP1I GCGC 3 cut(s) 5, 198, 1088
HindIII AAGCTT 1 cut(s) 1392
HinfI GANTC 7 cut(s) 128, 360, 544, 631, 839, 1262, 1382
HpaII CCGG 8 cut(s) 47, 204, 273, 344, 658, 677, 1399, 1749
HphI GGTGA 6 cut(s) 67, 205, 361, 1546, 1829, 2096
Hpy166II GTNNAC 3 cut(s) 168, 1117, 1454
Hpy188I TCNGA 9 cut(s) 102, 615, 684, 738, 844, 1526, 1813, 1857, 1998
Hpy8I GTNNAC 3 cut(s) 168, 1117, 1454
Hpy99I CGWCG 5 cut(s) 110, 261, 269, 299, 1019
HpyAV CCTTC 7 cut(s) 270, 893, 1552, 1687, 1709, 1885, 1985
HpyCH4III ACNGT 2 cut(s) 1057, 1291
HpyF10VI GCNNNNNNNGC 8 cut(s) 197, 204, 312, 321, 324, 385, 1316, 1673
HpyF3I CTNAG 5 cut(s) 1523, 1602, 1810, 1831, 2013
Hsp92I GRCGYC 5 cut(s) 5, 44, 259, 291, 297
Hsp92II CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
HspAI GCGC 3 cut(s) 5, 198, 1088
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 272
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 867
Kzo9I GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
LguI GCTCTTC 1 cut(s) 608
LmnI GCTCC 9 cut(s) 88, 452, 460, 568, 1039, 1611, 1912, 1957, 1998
Lsp1109I GCAGC 3 cut(s) 194, 375, 478
LweI GCATC 4 cut(s) 278, 381, 1861, 2028
MaeI CTAG 3 cut(s) 731, 797, 1101
MaeIII GTNAC 2 cut(s) 1723, 1786
MalI GATC 6 cut(s) 656, 702, 740, 869, 1478, 1821
MbiI CCGCTC 1 cut(s) 1034
MboI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 3 cut(s) 654, 700, 738
MhlI GDGCHC 7 cut(s) 145, 227, 336, 457, 603, 1321, 1608
MlsI TGGCCA 1 cut(s) 584
MluCI AATT 9 cut(s) 777, 973, 1156, 1207, 1337, 1493, 1498, 1569, 1899
MluNI TGGCCA 1 cut(s) 584
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1256
MmeI TCCRAC 2 cut(s) 125, 1257
Mox20I TGGCCA 1 cut(s) 584
MroI TCCGGA 1 cut(s) 272
MroNI GCCGGC 1 cut(s) 203
MroXI GAANNNNTTC 2 cut(s) 1493, 1899
MscI TGGCCA 1 cut(s) 584
MseI TTAA 5 cut(s) 432, 504, 672, 1155, 1206
MslI CAYNNNNRTG 5 cut(s) 447, 1326, 1583, 1721, 1777
Msp20I TGGCCA 1 cut(s) 584
MspA1I CMGCKG 1 cut(s) 1232
MspI CCGG 8 cut(s) 47, 204, 273, 344, 658, 677, 1399, 1749
MspR9I CCNGG 5 cut(s) 221, 242, 344, 641, 1070
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 4 cut(s) 221, 242, 641, 1070
MvnI CGCG 4 cut(s) 198, 264, 315, 425
MwoI GCNNNNNNNGC 8 cut(s) 197, 204, 312, 321, 324, 385, 1316, 1673
NaeI GCCGGC 1 cut(s) 205
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 344
NcoI CCATGG 1 cut(s) 81
NdeII GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
NgoMIV GCCGGC 1 cut(s) 203
NlaIII CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
NlaIV GGNNCC 9 cut(s) 6, 99, 176, 656, 681, 904, 1428, 1872, 2000
NmeAIII GCCGAG 2 cut(s) 164, 206
NmuCI GTSAC 1 cut(s) 1723
OliI CACNNNNGTG 1 cut(s) 447
PaeR7I CTCGAG 1 cut(s) 1256
PaqCI CACCTGC 1 cut(s) 471
PasI CCCWGGG 1 cut(s) 220
PciSI GCTCTTC 1 cut(s) 608
PcsI WCGNNNNNNNCGW 3 cut(s) 297, 303, 848
PdiI GCCGGC 1 cut(s) 205
PdmI GAANNNNTTC 2 cut(s) 1493, 1899
PfeI GAWTC 6 cut(s) 128, 360, 544, 631, 839, 1382
PfoI TCCNGGA 1 cut(s) 1068
PleI GAGTC 1 cut(s) 1256
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 1256
PpuMI RGGWCCY 2 cut(s) 175, 1427
PshBI ATTAAT 2 cut(s) 1155, 1206
Psp124BI GAGCTC 2 cut(s) 457, 1608
Psp5II RGGWCCY 2 cut(s) 175, 1427
Psp6I CCWGG 4 cut(s) 219, 240, 639, 1068
PspEI GGTNACC 1 cut(s) 1786
PspFI CCCAGC 2 cut(s) 406, 1609
PspGI CCWGG 4 cut(s) 219, 240, 639, 1068
PspN4I GGNNCC 9 cut(s) 6, 99, 176, 656, 681, 904, 1428, 1872, 2000
PspPPI RGGWCCY 2 cut(s) 175, 1427
PstI CTGCAG 1 cut(s) 468
PsuI RGATCY 3 cut(s) 654, 700, 738
PvuII CAGCTG 1 cut(s) 1232
RsaI GTAC 2 cut(s) 476, 1377
RsaNI GTAC 2 cut(s) 475, 1376
RseI CAYNNNNRTG 5 cut(s) 447, 1326, 1583, 1721, 1777
SacI GAGCTC 2 cut(s) 457, 1608
SapI GCTCTTC 1 cut(s) 608
SaqAI TTAA 5 cut(s) 432, 504, 672, 1155, 1206
Sau3AI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
ScaI AGTACT 1 cut(s) 476
SchI GAGTC 1 cut(s) 1256
ScrFI CCNGG 5 cut(s) 221, 242, 344, 641, 1070
SduI GDGCHC 7 cut(s) 145, 227, 336, 457, 603, 1321, 1608
SfaNI GCATC 4 cut(s) 278, 381, 1861, 2028
SfcI CTRYAG 1 cut(s) 464
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 1256
SgrAI CRCCGGYG 1 cut(s) 46
SinI GGWCC 9 cut(s) 78, 98, 175, 692, 880, 1093, 1107, 1284, 1427
SlaI CTCGAG 1 cut(s) 1256
SmiMI CAYNNNNRTG 5 cut(s) 447, 1326, 1583, 1721, 1777
SmlI CTYRAG 5 cut(s) 185, 704, 959, 1046, 1256
SmoI CTYRAG 5 cut(s) 185, 704, 959, 1046, 1256
Sse9I AATT 9 cut(s) 777, 973, 1156, 1207, 1337, 1493, 1498, 1569, 1899
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 3 cut(s) 731, 797, 1101
SstI GAGCTC 2 cut(s) 457, 1608
StyD4I CCNGG 5 cut(s) 219, 240, 342, 639, 1068
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 1057, 1291
TaqII GACCGA 1 cut(s) 119
TasI AATT 9 cut(s) 777, 973, 1156, 1207, 1337, 1493, 1498, 1569, 1899
TatI WGTACW 1 cut(s) 474
TauI GCSGC 8 cut(s) 203, 264, 318, 321, 324, 327, 425, 571
TfiI GAWTC 6 cut(s) 128, 360, 544, 631, 839, 1382
Tru1I TTAA 5 cut(s) 432, 504, 672, 1155, 1206
Tru9I TTAA 5 cut(s) 432, 504, 672, 1155, 1206
TscAI CASTG 3 cut(s) 1294, 1373, 1728
TseFI GTSAC 1 cut(s) 1723
TseI GCWGC 3 cut(s) 207, 388, 466
Tsp45I GTSAC 1 cut(s) 1723
TspGWI ACGGA 1 cut(s) 1304
TspRI CASTG 3 cut(s) 1294, 1373, 1728
VpaK11BI GGWCC 9 cut(s) 78, 98, 175, 692, 880, 1093, 1107, 1284, 1427
VspI ATTAAT 2 cut(s) 1155, 1206
XagI CCTNNNNNAGG 1 cut(s) 185
XapI RAATTY 3 cut(s) 1337, 1493, 1899
XbaI TCTAGA 1 cut(s) 796
XcmI CCANNNNNNNNNTGG 1 cut(s) 88
XhoI CTCGAG 1 cut(s) 1256
XmnI GAANNNNTTC 2 cut(s) 1493, 1899
XspI CTAG 3 cut(s) 731, 797, 1101
ZrmI AGTACT 1 cut(s) 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.