RLG00000010510

xyloglucan glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0014524
Physical Location & Seq
Forward (+)
2241500 .. 2244068
2569 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010510

Sequence Viewer

Length: 2100 bp
ATGGCGCCGTCTTGGTGGTCGAAAGAGGACAGCCACCGAGGGACGCCGGTGGTGGTGAAGATGGAGAACCCGAACTGGTCCATGGTGGAGCTGGAGGGTCCGACCGACGAGGACTTCCTAATGGCGGATTCCCCGAGCCGAGCCCGAGACAAAGGCCGAGGCAAAAACGCCAAGCAGTTCACTTGGGTCCTCCTCCTCAAGGCCCACCGCGCCGCCGGCTGCCTCACCTCCCTGGGCTCGGCAATGTTGGGCCTGGCCTCCGCCATACGACGCCGCGTCGCTTCCGGAAGGACAGACACCGACGCCGACAGCGGCGGCAGAGGGCACGAGAACCCGGCGGTGAAGTCAAGGTTCTATTTCTGCATCAAGCTGTTTCTGTTGCTCTCTCTGCTTCTGCTGGGGTTTGAGGTCGCCGCGTATTTTAAAGGGTGGCACTTTGGAGCTCCACACCTGCAGCTCCAGTACTTGTGGGAGATGGAGTTTGATGGGGTTAAGGGGGCTTTCGATTGGGTCTATTCCAAATGGGTTTTGATTCGGGTCGAGTATCTCGCTCCGCCGCTTCAGTTTTTGGCCAATGCCTGTATTGTGCTCTTCATGGTTCAGAGCTTTGATAGGTTGATTCTGTGCCTGGGGTGTTTCTGGATCCGGTTCAAGAAGATTAAGCCGGTTCCGAAAGGCGGTCCTTTGGATCTTGAATCCTCCGAGAATGGCTACTACTTCCCTATGGTCCTAGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAGTCAATTGGTGCTGTGTGTAATCTAGACTGGCCCAAGTCGAGGTTGTTGGTTCAAGTTCTTGACGATTCGGATGACCCGACTACGCAGTTTATGATCAAAGAGGAGGTCCAGAAATGGCACAAGGAAGGGGCCAACATTTTGTATCGGCACAGAGTTATTAGAGATGGATACAAGGCTGGCAATCTCAAGTCTGCAATGAATTGTAGCTATGTCAAAGACTACGAGTTTGTTGCCATTTTCGACGCTGATTTTCAGCCCGCTCCTGATTTCCTCAAGAGAACAGTCCCACACTTCCAGGACAATGAAGAACTGGCGCTGGTGCAAGCTAGGTGGTCCTTTGTGAACAGGGATGAGAACCTACTCACAAGGTTGCAGAACATTAATTTGACATTCCACTTTGAAGTCGAACAACAAGTAAATAGTGTGTTCATTAATTTCTTTGGGTTCAACGGGACAGCTGGTGTGTGGAGGATAAAGGCTCTCGAGGACTCTGGTGGGTGGTTGGAGAGGACCACTGTCGAGGACATGGATATTGCTGTCCGTGCTCATCTTCATGGCTGGAAATTCATCTTCCTCAACGATGTTGAGTGCCAGTGCGAAGTACCTGAATCTTACGAAGCTTACCGGAAACAACAACACAGATGGCACTCGGGACCTATGCAGTTGTTTCGCCTATGTTTACCCGATATCATCAAATCCAAGATCAGCATTTGGAAGAAATTCAATTTGATTTTCCTCTTCTTTCTGCTCAGAAAGTTGATATTGCCCTTCTATTCTTTCACCCTATTTTGCATAATTCTTCCCATGACAATGTTCATCCCCGAAGCTGAGCTCCCAGCATGGGTTGTGTGCTACATCCCTGCAACCATGTCATTCCTCAATATCCTCCCGGCCCCAAAAGCCTTCCCGTTCATTGTTCCTTACCTTCTCTTCGAAAACACCATGTCAGTGACCAAGTTCAATGCTATGATATCCGGCCTATTCCAGCTCGGGAGTGCATACGAGTGGGTGGTTACCAAGAAGTCTGGGCGTTCCTCAGAGGGTGATCTTGTCTCCTTAGTCGAGAAAGAGCCAAAGCATCAGAGGGGGGTCTCGGTTCCAGACCTTGCCGAAATGAAGGAAGAAATTCGACAGCAGGAGCAAAAGGCCAAGAAGAAGAAGCATAACAGAATATACACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACGGCTTCAGCTCGGAGCCTGCTATCTGCTCAGGGCATCCATTTCTATTTCTTGTTGTTTCAGGGAATATCATTCCTGCTGGTTGGTTTAGACTTGATTGGTGAGCAGGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

700

Amino Acids

80.34

Weight (kDa)

8.09

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 241 - 474 1.9e-15 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 246 - 383 6.6e-12 Glycosyl transferase family 2
Glyco_transf_21 PF13506 330 - 474 1.7e-07 Glycosyl transferase family 21
Glyco_trans_2_3 PF13632 335 - 541 5.2e-22 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014524)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G07960 AT4G07960
fragaria_vesca FvH4_2g32570
malus_domestica MD08G1076900.v1.1 MD15G1064400.v1.1
prunus_persica Prupe.1G418400_v2.0.a1
pyrus_communis pycom08g06370 pycom15g06110
rosa_chinensis RchiOBHm_Chr6g0310111
rosa_laevigata RLG00000010510
rosa_multiflora Rmu_sc0000294.1_g000027
rosa_roxburghii Rroxscaffold_7G00158860
rosa_rugosa Rorug06G0377600
rosa_samantha Rh6BG500800 Rh6CG505900 Rh6DG491800
rosa_wichuraiana Rw6G042760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 459
Acc36I ACCTGC 2 cut(s) 459, 2080
AccB1I GGYRCC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 1034
AccII CGCG 3 cut(s) 210, 276, 416
AccIII TCCGGA 1 cut(s) 284
AclWI GGATC 4 cut(s) 637, 650, 696, 733
AcoI YGGCCR 1 cut(s) 570
AcsI RAATTY 3 cut(s) 1337, 1493, 1899
AcuI CTGAAG 2 cut(s) 545, 1974
AcyI GRCGYC 4 cut(s) 5, 44, 271, 303
AfaI GTAC 2 cut(s) 464, 1377
AfiI CCNNNNNNNGG 6 cut(s) 124, 199, 238, 677, 813, 1615
AgsI TTSAA 7 cut(s) 652, 695, 827, 1175, 1222, 1498, 1735
AhdI GACNNNNNGTC 1 cut(s) 275
AjnI CCWGG 4 cut(s) 231, 252, 627, 1068
Alw21I GWGCWC 4 cut(s) 445, 591, 1321, 1608
Alw26I GTCTC 3 cut(s) 141, 1831, 1870
AlwI GGATC 4 cut(s) 637, 650, 696, 733
Ama87I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Aor13HI TCCGGA 1 cut(s) 284
ApeKI GCWGC 2 cut(s) 219, 454
ApoI RAATTY 3 cut(s) 1337, 1493, 1899
ArsI GACNNNNNNTTYG 4 cut(s) 864, 896, 983, 1015
AseI ATTAAT 2 cut(s) 1155, 1206
Asp700I GAANNNNTTC 2 cut(s) 1493, 1899
AspLEI GCGC 3 cut(s) 7, 212, 1090
AsuC2I CCSGG 2 cut(s) 335, 1664
AsuHPI GGTGA 6 cut(s) 67, 217, 352, 1546, 1829, 2096
AsuII TTCGAA 1 cut(s) 1707
AvaI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
AvaII GGWCC 9 cut(s) 78, 98, 187, 680, 727, 880, 1107, 1284, 1427
BaeGI GKGCMC 1 cut(s) 327
BalI TGGCCA 1 cut(s) 572
BamHI GGATCC 1 cut(s) 642
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 4 cut(s) 145, 239, 445, 1608
BauI CACGAG 1 cut(s) 326
Bbv12I GWGCWC 4 cut(s) 445, 591, 1321, 1608
BbvI GCAGC 2 cut(s) 206, 466
BccI CCATC 5 cut(s) 55, 469, 479, 932, 1410
BceAI ACGGC 1 cut(s) 2001
BcgI CGANNNNNNTGC 4 cut(s) 986, 1020, 1424, 1458
BciT130I CCWGG 4 cut(s) 233, 254, 629, 1070
BciVI GTATCC 1 cut(s) 935
BclI TGATCA 1 cut(s) 867
BcnI CCSGG 2 cut(s) 335, 1664
BcoDI GTCTC 3 cut(s) 141, 1831, 1870
BfaI CTAG 3 cut(s) 731, 797, 1101
BfmI CTRYAG 1 cut(s) 452
BfoI RGCGCY 2 cut(s) 8, 1091
BfuAI ACCTGC 2 cut(s) 459, 2080
BfuI GTATCC 1 cut(s) 935
BisI GCNGC 8 cut(s) 213, 220, 274, 313, 316, 414, 455, 557
BlpI GCTNAGC 1 cut(s) 1602
BlsI GCNGC 8 cut(s) 214, 221, 275, 314, 317, 415, 456, 558
BmcAI AGTACT 1 cut(s) 464
Bme1390I CCNGG 6 cut(s) 233, 254, 335, 629, 1070, 1664
Bme18I GGWCC 9 cut(s) 78, 98, 187, 680, 727, 880, 1107, 1284, 1427
BmeRI GACNNNNNGTC 1 cut(s) 275
BmeT110I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
BmrFI CCNGG 6 cut(s) 233, 254, 335, 629, 1070, 1664
BmsI GCATC 3 cut(s) 372, 1861, 2028
BoxI GACNNNNGTC 1 cut(s) 1289
BpmI CTGGAG 2 cut(s) 113, 443
Bpu10I CCTNAGC 1 cut(s) 2013
Bpu1102I GCTNAGC 1 cut(s) 1602
Bpu14I TTCGAA 1 cut(s) 1707
BpuEI CTTGAG 3 cut(s) 182, 944, 1031
BpuMI CCSGG 2 cut(s) 335, 1664
BsaHI GRCGYC 4 cut(s) 5, 44, 271, 303
BsaI GGTCTC 1 cut(s) 1870
BsaJI CCNNGG 6 cut(s) 37, 81, 157, 231, 232, 628
BsaWI WCCGGW 3 cut(s) 284, 645, 1398
BsaXI ACNNNNNCTCC 2 cut(s) 464, 494
Bsc4I CCNNNNNNNGG 6 cut(s) 124, 199, 238, 677, 813, 1615
Bse118I RCCGGY 3 cut(s) 46, 215, 664
Bse1I ACTGG 5 cut(s) 80, 460, 806, 1089, 1366
Bse3DI GCAATG 3 cut(s) 249, 757, 975
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 4 cut(s) 233, 254, 629, 1070
BseDI CCNNGG 6 cut(s) 37, 81, 157, 231, 232, 628
BseGI GGATG 5 cut(s) 850, 1129, 1590, 1629, 2019
BseLI CCNNNNNNNGG 6 cut(s) 124, 199, 238, 677, 813, 1615
BseMI GCAATG 3 cut(s) 249, 757, 975
BseMII CTCAG 4 cut(s) 1537, 1593, 1824, 2027
BseNI ACTGG 5 cut(s) 80, 460, 806, 1089, 1366
BseRI GAGGAG 3 cut(s) 182, 185, 890
BseSI GKGCMC 1 cut(s) 327
BseXI GCAGC 2 cut(s) 206, 466
BseYI CCCAGC 2 cut(s) 397, 1609
Bsh1236I CGCG 3 cut(s) 210, 276, 416
Bsh1285I CGRYCG 1 cut(s) 105
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 4 cut(s) 445, 591, 1321, 1608
BsiHKCI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
BsiSI CCGG 9 cut(s) 47, 216, 285, 335, 646, 665, 1399, 1664, 1749
BslFI GGGAC 4 cut(s) 55, 1043, 1240, 1440
BslI CCNNNNNNNGG 6 cut(s) 124, 199, 238, 677, 813, 1615
BsmAI GTCTC 3 cut(s) 141, 1831, 1870
BsmFI GGGAC 4 cut(s) 55, 1043, 1240, 1440
Bso31I GGTCTC 1 cut(s) 1870
BsoBI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Bsp119I TTCGAA 1 cut(s) 1707
Bsp1286I GDGCHC 7 cut(s) 145, 239, 327, 445, 591, 1321, 1608
Bsp13I TCCGGA 1 cut(s) 284
Bsp143I GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
Bsp1720I GCTNAGC 1 cut(s) 1602
Bsp19I CCATGG 1 cut(s) 81
BspCNI CTCAG 4 cut(s) 1536, 1594, 1823, 2026
BspEI TCCGGA 1 cut(s) 284
BspFNI CGCG 3 cut(s) 210, 276, 416
BspMAI CTGCAG 1 cut(s) 456
BspMI ACCTGC 2 cut(s) 459, 2080
BspPI GGATC 4 cut(s) 637, 650, 696, 733
BspQI GCTCTTC 1 cut(s) 596
BspT104I TTCGAA 1 cut(s) 1707
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 1870
BsrBI CCGCTC 1 cut(s) 1034
BsrDI GCAATG 3 cut(s) 249, 757, 975
BsrFI RCCGGY 3 cut(s) 46, 215, 664
BsrI ACTGG 5 cut(s) 80, 460, 806, 1089, 1366
BssAI RCCGGY 3 cut(s) 46, 215, 664
BssECI CCNNGG 6 cut(s) 37, 81, 157, 231, 232, 628
BssMI GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
BssNI GRCGYC 4 cut(s) 5, 44, 271, 303
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 1 cut(s) 81
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 4 cut(s) 233, 254, 629, 1070
Bst4CI ACNGT 2 cut(s) 1057, 1291
Bst6I CTCTTC 3 cut(s) 596, 1517, 1709
BstACI GRCGYC 4 cut(s) 5, 44, 271, 303
BstBI TTCGAA 1 cut(s) 1707
BstC8I GCNNGC 6 cut(s) 217, 952, 1032, 1098, 1962, 2003
BstDEI CTNAG 5 cut(s) 1523, 1602, 1810, 1831, 2013
BstDSI CCRYGG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 1786
BstENI CCTNNNNNAGG 1 cut(s) 197
BstF5I GGATG 5 cut(s) 850, 1129, 1590, 1629, 2019
BstFNI CGCG 3 cut(s) 210, 276, 416
BstH2I RGCGCY 2 cut(s) 8, 1091
BstHHI GCGC 3 cut(s) 7, 212, 1090
BstKTI GATC 6 cut(s) 645, 691, 741, 870, 1479, 1822
BstMAI GTCTC 3 cut(s) 141, 1831, 1870
BstMBI GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 5 cut(s) 209, 216, 388, 1316, 1673
BstNI CCWGG 4 cut(s) 233, 254, 629, 1070
BstPAI GACNNNNGTC 1 cut(s) 1289
BstPI GGTNACC 1 cut(s) 1786
BstSCI CCNGG 6 cut(s) 231, 252, 333, 627, 1068, 1662
BstSFI CTRYAG 1 cut(s) 452
BstSLI GKGCMC 1 cut(s) 327
BstUI CGCG 3 cut(s) 210, 276, 416
BstV1I GCAGC 2 cut(s) 206, 466
BstX2I RGATCY 3 cut(s) 642, 688, 738
BstYI RGATCY 3 cut(s) 642, 688, 738
BsuI GTATCC 1 cut(s) 935
BtgI CCRYGG 1 cut(s) 81
BtsCI GGATG 5 cut(s) 850, 1129, 1590, 1629, 2019
BtsIMutI CAGTG 3 cut(s) 1287, 1373, 1728
BveI ACCTGC 2 cut(s) 459, 2080
Cac8I GCNNGC 6 cut(s) 217, 952, 1032, 1098, 1962, 2003
CfoI GCGC 3 cut(s) 7, 212, 1090
Cfr10I RCCGGY 3 cut(s) 46, 215, 664
CseI GACGC 5 cut(s) 52, 265, 279, 311, 1025
Csp6I GTAC 2 cut(s) 463, 1376
CspCI CAANNNNNGTGG 2 cut(s) 1085, 1120
CviAII CATG 9 cut(s) 82, 595, 745, 1300, 1328, 1579, 1614, 1642, 1717
CviQI GTAC 2 cut(s) 463, 1376
DdeI CTNAG 5 cut(s) 1523, 1602, 1810, 1831, 2013
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 644, 690, 740, 869, 1478, 1821
DpnII GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
DraI TTTAAA 1 cut(s) 424
DriI GACNNNNNGTC 1 cut(s) 275
EaeI YGGCCR 1 cut(s) 570
Eam1104I CTCTTC 3 cut(s) 596, 1517, 1709
Eam1105I GACNNNNNGTC 1 cut(s) 275
EarI CTCTTC 3 cut(s) 596, 1517, 1709
EciI GGCGGA 3 cut(s) 140, 250, 543
Ecl136II GAGCTC 2 cut(s) 443, 1606
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 4 cut(s) 145, 239, 445, 1608
Eco31I GGTCTC 1 cut(s) 1870
Eco32I GATATC 2 cut(s) 1462, 1746
Eco47I GGWCC 9 cut(s) 78, 98, 187, 680, 727, 880, 1107, 1284, 1427
Eco53kI GAGCTC 2 cut(s) 443, 1606
Eco57I CTGAAG 2 cut(s) 545, 1974
Eco88I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Eco91I GGTNACC 1 cut(s) 1786
EcoICRI GAGCTC 2 cut(s) 443, 1606
EcoNI CCTNNNNNAGG 1 cut(s) 197
EcoO109I RGGNCCY 2 cut(s) 187, 1427
EcoO65I GGTNACC 1 cut(s) 1786
EcoRII CCWGG 4 cut(s) 231, 252, 627, 1068
EcoRV GATATC 2 cut(s) 1462, 1746
EcoT14I CCWWGG 1 cut(s) 81
EcoT38I GRGCYC 4 cut(s) 145, 239, 445, 1608
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 9 cut(s) 85, 598, 748, 1303, 1331, 1582, 1617, 1645, 1720
FaqI GGGAC 4 cut(s) 55, 1043, 1240, 1440
FatI CATG 9 cut(s) 81, 594, 744, 1299, 1327, 1578, 1613, 1641, 1716
FauI CCCGC 1 cut(s) 1039
FbaI TGATCA 1 cut(s) 867
Fnu4HI GCNGC 8 cut(s) 213, 220, 274, 313, 316, 414, 455, 557
FokI GGATG 5 cut(s) 857, 1136, 1577, 1616, 2006
FriOI GRGCYC 4 cut(s) 145, 239, 445, 1608
Fsp4HI GCNGC 8 cut(s) 213, 220, 274, 313, 316, 414, 455, 557
FspBI CTAG 3 cut(s) 731, 797, 1101
GlaI GCGC 3 cut(s) 6, 211, 1089
GluI GCNGC 8 cut(s) 213, 220, 274, 313, 316, 414, 455, 557
GsaI CCCAGC 2 cut(s) 401, 1613
GsuI CTGGAG 2 cut(s) 113, 443
HaeII RGCGCY 2 cut(s) 8, 1091
HapII CCGG 9 cut(s) 47, 216, 285, 335, 646, 665, 1399, 1664, 1749
HgaI GACGC 5 cut(s) 52, 265, 279, 311, 1025
HhaI GCGC 3 cut(s) 7, 212, 1090
Hin1I GRCGYC 4 cut(s) 5, 44, 271, 303
Hin1II CATG 9 cut(s) 85, 598, 748, 1303, 1331, 1582, 1617, 1645, 1720
Hin6I GCGC 3 cut(s) 5, 210, 1088
HinP1I GCGC 3 cut(s) 5, 210, 1088
HindIII AAGCTT 1 cut(s) 1392
HinfI GANTC 7 cut(s) 128, 532, 619, 695, 839, 1262, 1382
HpaII CCGG 9 cut(s) 47, 216, 285, 335, 646, 665, 1399, 1664, 1749
HphI GGTGA 6 cut(s) 67, 217, 352, 1546, 1829, 2096
Hpy166II GTNNAC 3 cut(s) 180, 1117, 1454
Hpy8I GTNNAC 3 cut(s) 180, 1117, 1454
Hpy99I CGWCG 5 cut(s) 110, 273, 281, 305, 1019
HpyAV CCTTC 7 cut(s) 282, 893, 1552, 1687, 1709, 1885, 1985
HpyCH4III ACNGT 2 cut(s) 1057, 1291
HpyF10VI GCNNNNNNNGC 5 cut(s) 209, 216, 388, 1316, 1673
HpyF3I CTNAG 5 cut(s) 1523, 1602, 1810, 1831, 2013
Hsp92I GRCGYC 4 cut(s) 5, 44, 271, 303
Hsp92II CATG 9 cut(s) 85, 598, 748, 1303, 1331, 1582, 1617, 1645, 1720
HspAI GCGC 3 cut(s) 5, 210, 1088
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 284
KroI GCCGGC 1 cut(s) 215
KroNI GCCGGC 1 cut(s) 217
Ksp22I TGATCA 1 cut(s) 867
Kzo9I GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
LguI GCTCTTC 1 cut(s) 596
Lsp1109I GCAGC 2 cut(s) 206, 466
LweI GCATC 3 cut(s) 372, 1861, 2028
MaeI CTAG 3 cut(s) 731, 797, 1101
MaeIII GTNAC 2 cut(s) 1723, 1786
MalI GATC 6 cut(s) 644, 690, 740, 869, 1478, 1821
MbiI CCGCTC 1 cut(s) 1034
MboI GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 3 cut(s) 642, 688, 738
MhlI GDGCHC 7 cut(s) 145, 239, 327, 445, 591, 1321, 1608
MlsI TGGCCA 1 cut(s) 572
MluCI AATT 9 cut(s) 777, 973, 1156, 1207, 1337, 1493, 1498, 1569, 1899
MluNI TGGCCA 1 cut(s) 572
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1256
MmeI TCCRAC 2 cut(s) 125, 1257
Mox20I TGGCCA 1 cut(s) 572
MroI TCCGGA 1 cut(s) 284
MroNI GCCGGC 1 cut(s) 215
MroXI GAANNNNTTC 2 cut(s) 1493, 1899
MscI TGGCCA 1 cut(s) 572
MseI TTAA 5 cut(s) 423, 492, 660, 1155, 1206
MslI CAYNNNNRTG 4 cut(s) 1326, 1583, 1721, 1777
Msp20I TGGCCA 1 cut(s) 572
MspA1I CMGCKG 2 cut(s) 312, 1232
MspI CCGG 9 cut(s) 47, 216, 285, 335, 646, 665, 1399, 1664, 1749
MspR9I CCNGG 6 cut(s) 233, 254, 335, 629, 1070, 1664
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 4 cut(s) 233, 254, 629, 1070
MvnI CGCG 3 cut(s) 210, 276, 416
MwoI GCNNNNNNNGC 5 cut(s) 209, 216, 388, 1316, 1673
NaeI GCCGGC 1 cut(s) 217
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 2 cut(s) 335, 1664
NcoI CCATGG 1 cut(s) 81
NdeII GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
NgoMIV GCCGGC 1 cut(s) 215
NlaIII CATG 9 cut(s) 85, 598, 748, 1303, 1331, 1582, 1617, 1645, 1720
NmeAIII GCCGAG 3 cut(s) 164, 182, 218
NmuCI GTSAC 1 cut(s) 1723
NspV TTCGAA 1 cut(s) 1707
PaeR7I CTCGAG 1 cut(s) 1256
PaqCI CACCTGC 1 cut(s) 459
PasI CCCWGGG 1 cut(s) 232
PciSI GCTCTTC 1 cut(s) 596
PcsI WCGNNNNNNNCGW 1 cut(s) 848
PdiI GCCGGC 1 cut(s) 217
PdmI GAANNNNTTC 2 cut(s) 1493, 1899
PfeI GAWTC 6 cut(s) 128, 532, 619, 695, 839, 1382
PfoI TCCNGGA 1 cut(s) 1068
PkrI GCNGC 8 cut(s) 214, 221, 275, 314, 317, 415, 456, 558
PleI GAGTC 1 cut(s) 1256
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 1256
PpuMI RGGWCCY 2 cut(s) 187, 1427
PshAI GACNNNNGTC 1 cut(s) 1289
PshBI ATTAAT 2 cut(s) 1155, 1206
Psp124BI GAGCTC 2 cut(s) 445, 1608
Psp5II RGGWCCY 2 cut(s) 187, 1427
Psp6I CCWGG 4 cut(s) 231, 252, 627, 1068
PspEI GGTNACC 1 cut(s) 1786
PspFI CCCAGC 2 cut(s) 397, 1609
PspGI CCWGG 4 cut(s) 231, 252, 627, 1068
PspPPI RGGWCCY 2 cut(s) 187, 1427
PstI CTGCAG 1 cut(s) 456
PsuI RGATCY 3 cut(s) 642, 688, 738
PvuII CAGCTG 1 cut(s) 1232
RsaI GTAC 2 cut(s) 464, 1377
RsaNI GTAC 2 cut(s) 463, 1376
RseI CAYNNNNRTG 4 cut(s) 1326, 1583, 1721, 1777
SacI GAGCTC 2 cut(s) 445, 1608
SapI GCTCTTC 1 cut(s) 596
SaqAI TTAA 5 cut(s) 423, 492, 660, 1155, 1206
SatI GCNGC 8 cut(s) 213, 220, 274, 313, 316, 414, 455, 557
Sau3AI GATC 6 cut(s) 642, 688, 738, 867, 1476, 1819
ScaI AGTACT 1 cut(s) 464
SchI GAGTC 1 cut(s) 1256
ScrFI CCNGG 6 cut(s) 233, 254, 335, 629, 1070, 1664
SduI GDGCHC 7 cut(s) 145, 239, 327, 445, 591, 1321, 1608
SfaNI GCATC 3 cut(s) 372, 1861, 2028
SfcI CTRYAG 1 cut(s) 452
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 1256
SfuI TTCGAA 1 cut(s) 1707
SgrAI CRCCGGYG 1 cut(s) 46
SinI GGWCC 9 cut(s) 78, 98, 187, 680, 727, 880, 1107, 1284, 1427
SlaI CTCGAG 1 cut(s) 1256
SmiMI CAYNNNNRTG 4 cut(s) 1326, 1583, 1721, 1777
SmlI CTYRAG 4 cut(s) 197, 959, 1046, 1256
SmoI CTYRAG 4 cut(s) 197, 959, 1046, 1256
Sse9I AATT 9 cut(s) 777, 973, 1156, 1207, 1337, 1493, 1498, 1569, 1899
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 3 cut(s) 731, 797, 1101
SstI GAGCTC 2 cut(s) 445, 1608
StyD4I CCNGG 6 cut(s) 231, 252, 333, 627, 1068, 1662
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 1057, 1291
TaqII GACCGA 1 cut(s) 119
TasI AATT 9 cut(s) 777, 973, 1156, 1207, 1337, 1493, 1498, 1569, 1899
TatI WGTACW 1 cut(s) 462
TauI GCSGC 6 cut(s) 215, 276, 315, 318, 416, 559
TfiI GAWTC 6 cut(s) 128, 532, 619, 695, 839, 1382
Tru1I TTAA 5 cut(s) 423, 492, 660, 1155, 1206
Tru9I TTAA 5 cut(s) 423, 492, 660, 1155, 1206
TscAI CASTG 3 cut(s) 1294, 1373, 1728
TseFI GTSAC 1 cut(s) 1723
TseI GCWGC 2 cut(s) 219, 454
Tsp45I GTSAC 1 cut(s) 1723
TspDTI ATGAA 9 cut(s) 583, 986, 1092, 1192, 1316, 1330, 1579, 1675, 1904
TspGWI ACGGA 1 cut(s) 1304
TspRI CASTG 3 cut(s) 1294, 1373, 1728
VpaK11BI GGWCC 9 cut(s) 78, 98, 187, 680, 727, 880, 1107, 1284, 1427
VspI ATTAAT 2 cut(s) 1155, 1206
XagI CCTNNNNNAGG 1 cut(s) 197
XapI RAATTY 3 cut(s) 1337, 1493, 1899
XbaI TCTAGA 1 cut(s) 796
XcmI CCANNNNNNNNNTGG 1 cut(s) 88
XhoI CTCGAG 1 cut(s) 1256
XmnI GAANNNNTTC 2 cut(s) 1493, 1899
XspI CTAG 3 cut(s) 731, 797, 1101
ZrmI AGTACT 1 cut(s) 464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.