Rw6G042760

xyloglucan glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0014524
Physical Location & Seq
Reverse (-)
66155321 .. 66157894
2574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G042760.1

Sequence Viewer

Length: 2100 bp
ATGGCGCCGTCTTGGTGGTCGAAAGAGGACAGCCACCGAGGGACGCCGGTGGTGGTGAAGATGGAGAACCCGAACTGGTCCATGGTGGAGCTGGAGGGTCCGACCGACGAGGACTTCCTAATGGCGGATTCCCCGAGCCGAGCCCGAGGCAAAAACGCCAAGCAGTTCACTTGGGTCCTCCTCCTCAAGGCCCACCGCGCCGCCGGCTGCCTCACCTCCCTGGGCTCGGCAATGTTGGGCCTGGCCTCCGCCATACGACGCCGCGTCGCATCCGGAAGGACAGACGCCGACGCCGAAGCCGACAGCGAGCCACGCGGCGGCGGCGGCGGCAGAGGGCGCGAGAACCCGGCGGTCAAGTCAAGATTCTATTTCTGCATCAAGCTGTTTCTGTTGCTCTCTCTGGTTCTGCTGGGGTTTGAGGTCGCCGCGTATTTTAAAGGGTGGCACTTTGGAGCTCCACACCTGCAGCTTCAGTACTTGTGGGAGATGGAGTTTGATGGGGTTAAGGGGGCTTTCGATTGGGTCTATTCCAAATGGGTTCTGATTCGGGTCGAGTATCTCGCTCCGCCGCTTCAGTTTTTGGCCAATGCCTGTATCGTGCTCTTCATGGTTCAGAGCTTGGATAGGTTGATTCTGTGCCTGGGGTGTTTCTGGATCCGGTTCAAGAAGATTAAGCCGGTTCCGAAAGGCGGTCCTTTGGATCTTGAGAATGGCTACTTCCCTATGGTGCTAGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAGTCAATTGGTGCCGTGTGCAATTTAGACTGGCCCAAGTCGAGGTTGTTGGTTCAAGTTCTTGACGATTCGGATGACCCGACTACGCAGTTTATGATCAAAGAGGAGGTCCAGAAATGGCACAAGGAAGGGGCCAACATTTTGTATCGGCATAGAGTGATTAGAGATGGATACAAGGCTGGCAATCTCAAGTCTGCAATGAATTGTAGCTATGTCAAAGACTACGAGTTTGTTGCCATTTTCGACGCTGATTTTCAGCCCGCTCCTGATTTCCTCAAGAGAACAGTCCCACACTTCCAGGACAATGAAGAACTGGCGCTGGTGCAAGCTAGGTGGTCCTTTGTGAACAGGGATGAGAACCTACTCACAAGGTTGCAGAACATTAATTTGACATTCCACTTTGAAGTCGAACAACAAGTAAATAGTGTGTTCATTAATTTCTTTGGGTTCAACGGGACAGCTGGTGTGTGGAGGATAAAGGCTCTCGAGGACTCTGGTGGGTGGTTGGAGAGGACCACCGTGGAGGACATGGATATTGCTGTCCGTGCTCATCTTCATGGCTGGAAATTCATCTTCCTCAATGATGTTGAGTGCCAGTGCGAAGTACCTGAATCTTATGAAGCTTACCGGAAACAGCAACACAGATGGCACTCGGGACCTATGCAGTTGTTTCGCCTATGTTTACCCGATATCATCAAATCCAAGATCAGCATTTGGAAGAAATTCAATTTGATTTTCCTCTTCTTTCTTCTCAGAAAGTTGATATTGCCCTTCTATTCTTTCACCCTATTTTGCATAATTCTTCCCATGACAATGTTCATCCCCGAAGCTGAGCTCCCAGCATGGGTTGTGTGCTACATCCCTGCAACCATGTCATTCCTCAATATCCTCCCGGCCCCAAAAGCCTTCCCTTTCATTGTTCCTTACCTTCTCTTTGAAAACACCATGTCAGTGACCAAGTTCAATGCTATGATATCCGGCCTATTCCAGCTCGGGAGTGCATACGAGTGGGTGGTTACCAAGAAGTCTGGGCGTTCCTCAGAGGGTGATCTTGTCTCCTTAGTTGAGAAAGAGCCAAAGCATCAGAGGGGGGTCTCAGTTCCAGACCTTGCCGAAATGAAGGAAGAAATTCGACAGCAGGAGCAAAAGGCCAAGAAGAAGAAGCATAACAGAATATACACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACGGCTTCAGCTCGGAGCCTGCTGTCTGCTCAGGGCATCCATTTCTATTTCTTGTTGTTTCAGGGAATATCATTCCTGCTGGTTGGTTTAGACTTGATTGGTGAGCAGGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_tranf_2_3 Glyco_trans_2_3

Protein Analysis

699

Amino Acids

80.11

Weight (kDa)

8.09

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 241 - 474 1.9e-15 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 246 - 383 6.6e-12 Glycosyl transferase family 2
Glyco_transf_21 PF13506 330 - 474 1.7e-07 Glycosyl transferase family 21
Glyco_trans_2_3 PF13632 335 - 541 5.2e-22 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014524)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G07960 AT4G07960
fragaria_vesca FvH4_2g32570
malus_domestica MD08G1076900.v1.1 MD15G1064400.v1.1
prunus_persica Prupe.1G418400_v2.0.a1
pyrus_communis pycom08g06370 pycom15g06110
rosa_chinensis RchiOBHm_Chr6g0310111
rosa_laevigata RLG00000010510
rosa_multiflora Rmu_sc0000294.1_g000027
rosa_roxburghii Rroxscaffold_7G00158860
rosa_rugosa Rorug06G0377600
rosa_samantha Rh6BG500800 Rh6CG505900 Rh6DG491800
rosa_wichuraiana Rw6G042760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 471
Acc36I ACCTGC 2 cut(s) 471, 2080
AccB1I GGYRCC 2 cut(s) 4, 782
AccBSI CCGCTC 1 cut(s) 1034
AccII CGCG 5 cut(s) 198, 264, 315, 339, 428
AccIII TCCGGA 1 cut(s) 272
AclWI GGATC 4 cut(s) 649, 662, 708, 733
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 3 cut(s) 1337, 1493, 1899
AcuI CTGAAG 3 cut(s) 455, 557, 1974
AcyI GRCGYC 5 cut(s) 5, 44, 259, 285, 291
AfaI GTAC 2 cut(s) 476, 1377
AfiI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
AgsI TTSAA 7 cut(s) 664, 827, 1175, 1222, 1498, 1709, 1735
AhdI GACNNNNNGTC 1 cut(s) 263
AjnI CCWGG 4 cut(s) 219, 240, 639, 1068
Alw21I GWGCWC 4 cut(s) 457, 603, 1321, 1608
Alw26I GTCTC 2 cut(s) 1831, 1870
AlwI GGATC 4 cut(s) 649, 662, 708, 733
Ama87I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Aor13HI TCCGGA 1 cut(s) 272
AoxI GGCC 9 cut(s) 189, 238, 243, 582, 803, 903, 1665, 1750, 1920
ApeKI GCWGC 2 cut(s) 207, 466
ApoI RAATTY 3 cut(s) 1337, 1493, 1899
ArsI GACNNNNNNTTYG 4 cut(s) 864, 896, 983, 1015
AseI ATTAAT 2 cut(s) 1155, 1206
Asp700I GAANNNNTTC 2 cut(s) 1493, 1899
AspLEI GCGC 4 cut(s) 7, 200, 339, 1090
AsuC2I CCSGG 2 cut(s) 347, 1664
AsuHPI GGTGA 5 cut(s) 67, 205, 1546, 1829, 2096
AvaI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
AvaII GGWCC 8 cut(s) 78, 98, 175, 692, 880, 1107, 1284, 1427
BalI TGGCCA 1 cut(s) 584
BamHI GGATCC 1 cut(s) 654
BanI GGYRCC 2 cut(s) 4, 782
BanII GRGCYC 4 cut(s) 145, 227, 457, 1608
Bbv12I GWGCWC 4 cut(s) 457, 603, 1321, 1608
BbvI GCAGC 2 cut(s) 194, 478
BccI CCATC 5 cut(s) 55, 481, 491, 932, 1410
BceAI ACGGC 2 cut(s) 770, 2001
BcgI CGANNNNNNTGC 4 cut(s) 986, 1020, 1424, 1458
BciT130I CCWGG 4 cut(s) 221, 242, 641, 1070
BciVI GTATCC 1 cut(s) 935
BclI TGATCA 1 cut(s) 867
BcnI CCSGG 2 cut(s) 347, 1664
BcoDI GTCTC 2 cut(s) 1831, 1870
BfaI CTAG 2 cut(s) 731, 1101
BfmI CTRYAG 1 cut(s) 464
BfoI RGCGCY 2 cut(s) 8, 1091
BfuAI ACCTGC 2 cut(s) 471, 2080
BfuI GTATCC 1 cut(s) 935
BlpI GCTNAGC 1 cut(s) 1602
BmcAI AGTACT 1 cut(s) 476
Bme1390I CCNGG 6 cut(s) 221, 242, 347, 641, 1070, 1664
Bme18I GGWCC 8 cut(s) 78, 98, 175, 692, 880, 1107, 1284, 1427
BmeRI GACNNNNNGTC 1 cut(s) 263
BmeT110I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
BmrFI CCNGG 6 cut(s) 221, 242, 347, 641, 1070, 1664
BmsI GCATC 4 cut(s) 278, 384, 1861, 2028
BpmI CTGGAG 1 cut(s) 113
Bpu10I CCTNAGC 1 cut(s) 2013
Bpu1102I GCTNAGC 1 cut(s) 1602
BpuEI CTTGAG 4 cut(s) 170, 725, 944, 1031
BpuMI CCSGG 2 cut(s) 347, 1664
BsaHI GRCGYC 5 cut(s) 5, 44, 259, 285, 291
BsaI GGTCTC 1 cut(s) 1870
BsaJI CCNNGG 7 cut(s) 37, 81, 145, 219, 220, 640, 1290
BsaWI WCCGGW 3 cut(s) 272, 657, 1398
BsaXI ACNNNNNCTCC 2 cut(s) 476, 506
Bsc4I CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
Bse118I RCCGGY 3 cut(s) 46, 203, 676
Bse1I ACTGG 4 cut(s) 80, 806, 1089, 1366
Bse3DI GCAATG 3 cut(s) 237, 757, 975
BseAI TCCGGA 1 cut(s) 272
BseBI CCWGG 4 cut(s) 221, 242, 641, 1070
BseDI CCNNGG 7 cut(s) 37, 81, 145, 219, 220, 640, 1290
BseGI GGATG 6 cut(s) 269, 850, 1129, 1590, 1629, 2019
BseLI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
BseMI GCAATG 3 cut(s) 237, 757, 975
BseMII CTCAG 5 cut(s) 1537, 1593, 1824, 1881, 2027
BseNI ACTGG 4 cut(s) 80, 806, 1089, 1366
BseRI GAGGAG 3 cut(s) 170, 173, 890
BseXI GCAGC 2 cut(s) 194, 478
BseYI CCCAGC 2 cut(s) 409, 1609
Bsh1236I CGCG 5 cut(s) 198, 264, 315, 339, 428
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 9 cut(s) 191, 240, 245, 584, 805, 905, 1667, 1752, 1922
BshNI GGYRCC 2 cut(s) 4, 782
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 4 cut(s) 457, 603, 1321, 1608
BsiHKCI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
BsiSI CCGG 9 cut(s) 47, 204, 273, 347, 658, 677, 1399, 1664, 1749
BslFI GGGAC 4 cut(s) 55, 1043, 1240, 1440
BslI CCNNNNNNNGG 7 cut(s) 124, 187, 226, 317, 689, 813, 1615
BsmAI GTCTC 2 cut(s) 1831, 1870
BsmFI GGGAC 4 cut(s) 55, 1043, 1240, 1440
BsnI GGCC 9 cut(s) 191, 240, 245, 584, 805, 905, 1667, 1752, 1922
Bso31I GGTCTC 1 cut(s) 1870
BsoBI CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Bsp1286I GDGCHC 6 cut(s) 145, 227, 457, 603, 1321, 1608
Bsp13I TCCGGA 1 cut(s) 272
Bsp143I GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
Bsp1720I GCTNAGC 1 cut(s) 1602
Bsp19I CCATGG 1 cut(s) 81
BspANI GGCC 9 cut(s) 191, 240, 245, 584, 805, 905, 1667, 1752, 1922
BspCNI CTCAG 5 cut(s) 1536, 1594, 1823, 1880, 2026
BspEI TCCGGA 1 cut(s) 272
BspFNI CGCG 5 cut(s) 198, 264, 315, 339, 428
BspMAI CTGCAG 1 cut(s) 468
BspMI ACCTGC 2 cut(s) 471, 2080
BspPI GGATC 4 cut(s) 649, 662, 708, 733
BspQI GCTCTTC 1 cut(s) 608
BspT107I GGYRCC 2 cut(s) 4, 782
BspTNI GGTCTC 1 cut(s) 1870
BsrBI CCGCTC 1 cut(s) 1034
BsrDI GCAATG 3 cut(s) 237, 757, 975
BsrFI RCCGGY 3 cut(s) 46, 203, 676
BsrI ACTGG 4 cut(s) 80, 806, 1089, 1366
BssAI RCCGGY 3 cut(s) 46, 203, 676
BssECI CCNNGG 7 cut(s) 37, 81, 145, 219, 220, 640, 1290
BssMI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
BssNI GRCGYC 5 cut(s) 5, 44, 259, 285, 291
BssT1I CCWWGG 1 cut(s) 81
Bst2UI CCWGG 4 cut(s) 221, 242, 641, 1070
Bst4CI ACNGT 2 cut(s) 1057, 1291
Bst6I CTCTTC 2 cut(s) 608, 1517
BstACI GRCGYC 5 cut(s) 5, 44, 259, 285, 291
BstC8I GCNNGC 7 cut(s) 205, 308, 952, 1032, 1098, 1962, 2003
BstDEI CTNAG 6 cut(s) 1523, 1602, 1810, 1831, 1867, 2013
BstDSI CCRYGG 2 cut(s) 81, 1290
BstEII GGTNACC 1 cut(s) 1786
BstENI CCTNNNNNAGG 1 cut(s) 185
BstF5I GGATG 6 cut(s) 269, 850, 1129, 1590, 1629, 2019
BstFNI CGCG 5 cut(s) 198, 264, 315, 339, 428
BstH2I RGCGCY 2 cut(s) 8, 1091
BstHHI GCGC 4 cut(s) 7, 200, 339, 1090
BstKTI GATC 6 cut(s) 657, 703, 741, 870, 1479, 1822
BstMAI GTCTC 2 cut(s) 1831, 1870
BstMBI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 9 cut(s) 197, 204, 312, 321, 324, 327, 336, 1316, 1673
BstNI CCWGG 4 cut(s) 221, 242, 641, 1070
BstPI GGTNACC 1 cut(s) 1786
BstSCI CCNGG 6 cut(s) 219, 240, 345, 639, 1068, 1662
BstSFI CTRYAG 1 cut(s) 464
BstUI CGCG 5 cut(s) 198, 264, 315, 339, 428
BstV1I GCAGC 2 cut(s) 194, 478
BstX2I RGATCY 3 cut(s) 654, 700, 738
BstYI RGATCY 3 cut(s) 654, 700, 738
BsuI GTATCC 1 cut(s) 935
BsuRI GGCC 9 cut(s) 191, 240, 245, 584, 805, 905, 1667, 1752, 1922
BtgI CCRYGG 2 cut(s) 81, 1290
BtsCI GGATG 6 cut(s) 269, 850, 1129, 1590, 1629, 2019
BtsIMutI CAGTG 2 cut(s) 1373, 1728
BveI ACCTGC 2 cut(s) 471, 2080
Cac8I GCNNGC 7 cut(s) 205, 308, 952, 1032, 1098, 1962, 2003
CfoI GCGC 4 cut(s) 7, 200, 339, 1090
Cfr10I RCCGGY 3 cut(s) 46, 203, 676
CseI GACGC 6 cut(s) 52, 253, 267, 293, 299, 1025
Csp6I GTAC 2 cut(s) 475, 1376
CspCI CAANNNNNGTGG 2 cut(s) 1085, 1120
CviAII CATG 9 cut(s) 82, 607, 745, 1300, 1328, 1579, 1614, 1642, 1717
CviQI GTAC 2 cut(s) 475, 1376
DdeI CTNAG 6 cut(s) 1523, 1602, 1810, 1831, 1867, 2013
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 656, 702, 740, 869, 1478, 1821
DpnII GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
DraI TTTAAA 1 cut(s) 436
DriI GACNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 2 cut(s) 608, 1517
Eam1105I GACNNNNNGTC 1 cut(s) 263
EarI CTCTTC 2 cut(s) 608, 1517
EciI GGCGGA 3 cut(s) 140, 238, 555
Ecl136II GAGCTC 2 cut(s) 455, 1606
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 4 cut(s) 145, 227, 457, 1608
Eco31I GGTCTC 1 cut(s) 1870
Eco32I GATATC 2 cut(s) 1462, 1746
Eco47I GGWCC 8 cut(s) 78, 98, 175, 692, 880, 1107, 1284, 1427
Eco53kI GAGCTC 2 cut(s) 455, 1606
Eco57I CTGAAG 3 cut(s) 455, 557, 1974
Eco88I CYCGRG 5 cut(s) 133, 144, 1256, 1423, 1763
Eco91I GGTNACC 1 cut(s) 1786
EcoICRI GAGCTC 2 cut(s) 455, 1606
EcoNI CCTNNNNNAGG 1 cut(s) 185
EcoO109I RGGNCCY 2 cut(s) 175, 1427
EcoO65I GGTNACC 1 cut(s) 1786
EcoRII CCWGG 4 cut(s) 219, 240, 639, 1068
EcoRV GATATC 2 cut(s) 1462, 1746
EcoT14I CCWWGG 1 cut(s) 81
EcoT38I GRGCYC 4 cut(s) 145, 227, 457, 1608
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
FaqI GGGAC 4 cut(s) 55, 1043, 1240, 1440
FatI CATG 9 cut(s) 81, 606, 744, 1299, 1327, 1578, 1613, 1641, 1716
FauI CCCGC 1 cut(s) 1039
FbaI TGATCA 1 cut(s) 867
FokI GGATG 6 cut(s) 256, 857, 1136, 1577, 1616, 2006
FriOI GRGCYC 4 cut(s) 145, 227, 457, 1608
FspBI CTAG 2 cut(s) 731, 1101
GlaI GCGC 4 cut(s) 6, 199, 338, 1089
GsaI CCCAGC 2 cut(s) 413, 1613
GsuI CTGGAG 1 cut(s) 113
HaeII RGCGCY 2 cut(s) 8, 1091
HaeIII GGCC 9 cut(s) 191, 240, 245, 584, 805, 905, 1667, 1752, 1922
HapII CCGG 9 cut(s) 47, 204, 273, 347, 658, 677, 1399, 1664, 1749
HgaI GACGC 6 cut(s) 52, 253, 267, 293, 299, 1025
HhaI GCGC 4 cut(s) 7, 200, 339, 1090
Hin1I GRCGYC 5 cut(s) 5, 44, 259, 285, 291
Hin1II CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
Hin6I GCGC 4 cut(s) 5, 198, 337, 1088
HinP1I GCGC 4 cut(s) 5, 198, 337, 1088
HindIII AAGCTT 1 cut(s) 1392
HinfI GANTC 7 cut(s) 128, 363, 544, 631, 839, 1262, 1382
HpaII CCGG 9 cut(s) 47, 204, 273, 347, 658, 677, 1399, 1664, 1749
HphI GGTGA 5 cut(s) 67, 205, 1546, 1829, 2096
Hpy166II GTNNAC 3 cut(s) 168, 1117, 1454
Hpy8I GTNNAC 3 cut(s) 168, 1117, 1454
Hpy99I CGWCG 5 cut(s) 110, 261, 269, 293, 1019
HpyAV CCTTC 7 cut(s) 270, 893, 1552, 1687, 1709, 1885, 1985
HpyCH4III ACNGT 2 cut(s) 1057, 1291
HpyF10VI GCNNNNNNNGC 9 cut(s) 197, 204, 312, 321, 324, 327, 336, 1316, 1673
HpyF3I CTNAG 6 cut(s) 1523, 1602, 1810, 1831, 1867, 2013
Hsp92I GRCGYC 5 cut(s) 5, 44, 259, 285, 291
Hsp92II CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
HspAI GCGC 4 cut(s) 5, 198, 337, 1088
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 272
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 867
Kzo9I GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
LguI GCTCTTC 1 cut(s) 608
LmnI GCTCC 9 cut(s) 88, 452, 460, 568, 1039, 1611, 1912, 1957, 1998
Lsp1109I GCAGC 2 cut(s) 194, 478
LweI GCATC 4 cut(s) 278, 384, 1861, 2028
MaeI CTAG 2 cut(s) 731, 1101
MaeIII GTNAC 2 cut(s) 1723, 1786
MalI GATC 6 cut(s) 656, 702, 740, 869, 1478, 1821
MbiI CCGCTC 1 cut(s) 1034
MboI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 3 cut(s) 654, 700, 738
MhlI GDGCHC 6 cut(s) 145, 227, 457, 603, 1321, 1608
MlsI TGGCCA 1 cut(s) 584
MluNI TGGCCA 1 cut(s) 584
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1256
MmeI TCCRAC 2 cut(s) 125, 1257
Mox20I TGGCCA 1 cut(s) 584
MroI TCCGGA 1 cut(s) 272
MroNI GCCGGC 1 cut(s) 203
MroXI GAANNNNTTC 2 cut(s) 1493, 1899
MscI TGGCCA 1 cut(s) 584
MseI TTAA 5 cut(s) 435, 504, 672, 1155, 1206
MslI CAYNNNNRTG 4 cut(s) 1326, 1583, 1721, 1777
Msp20I TGGCCA 1 cut(s) 584
MspA1I CMGCKG 1 cut(s) 1232
MspI CCGG 9 cut(s) 47, 204, 273, 347, 658, 677, 1399, 1664, 1749
MspR9I CCNGG 6 cut(s) 221, 242, 347, 641, 1070, 1664
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 4 cut(s) 221, 242, 641, 1070
MvnI CGCG 5 cut(s) 198, 264, 315, 339, 428
MwoI GCNNNNNNNGC 9 cut(s) 197, 204, 312, 321, 324, 327, 336, 1316, 1673
NaeI GCCGGC 1 cut(s) 205
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 2 cut(s) 347, 1664
NcoI CCATGG 1 cut(s) 81
NdeII GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
NgoMIV GCCGGC 1 cut(s) 203
NlaIII CATG 9 cut(s) 85, 610, 748, 1303, 1331, 1582, 1617, 1645, 1720
NmeAIII GCCGAG 2 cut(s) 164, 206
NmuCI GTSAC 1 cut(s) 1723
PaeR7I CTCGAG 1 cut(s) 1256
PaqCI CACCTGC 1 cut(s) 471
PasI CCCWGGG 1 cut(s) 220
PciSI GCTCTTC 1 cut(s) 608
PcsI WCGNNNNNNNCGW 3 cut(s) 291, 297, 848
PdiI GCCGGC 1 cut(s) 205
PdmI GAANNNNTTC 2 cut(s) 1493, 1899
PfeI GAWTC 6 cut(s) 128, 363, 544, 631, 839, 1382
PfoI TCCNGGA 1 cut(s) 1068
PleI GAGTC 1 cut(s) 1256
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 1256
PpuMI RGGWCCY 2 cut(s) 175, 1427
PshBI ATTAAT 2 cut(s) 1155, 1206
Psp124BI GAGCTC 2 cut(s) 457, 1608
Psp5II RGGWCCY 2 cut(s) 175, 1427
Psp6I CCWGG 4 cut(s) 219, 240, 639, 1068
PspEI GGTNACC 1 cut(s) 1786
PspFI CCCAGC 2 cut(s) 409, 1609
PspGI CCWGG 4 cut(s) 219, 240, 639, 1068
PspPPI RGGWCCY 2 cut(s) 175, 1427
PstI CTGCAG 1 cut(s) 468
PsuI RGATCY 3 cut(s) 654, 700, 738
PvuII CAGCTG 1 cut(s) 1232
RsaI GTAC 2 cut(s) 476, 1377
RsaNI GTAC 2 cut(s) 475, 1376
RseI CAYNNNNRTG 4 cut(s) 1326, 1583, 1721, 1777
SacI GAGCTC 2 cut(s) 457, 1608
SapI GCTCTTC 1 cut(s) 608
SaqAI TTAA 5 cut(s) 435, 504, 672, 1155, 1206
Sau3AI GATC 6 cut(s) 654, 700, 738, 867, 1476, 1819
ScaI AGTACT 1 cut(s) 476
SchI GAGTC 1 cut(s) 1256
ScrFI CCNGG 6 cut(s) 221, 242, 347, 641, 1070, 1664
SduI GDGCHC 6 cut(s) 145, 227, 457, 603, 1321, 1608
SfaNI GCATC 4 cut(s) 278, 384, 1861, 2028
SfcI CTRYAG 1 cut(s) 464
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 1256
SgrAI CRCCGGYG 1 cut(s) 46
SinI GGWCC 8 cut(s) 78, 98, 175, 692, 880, 1107, 1284, 1427
SlaI CTCGAG 1 cut(s) 1256
SmiMI CAYNNNNRTG 4 cut(s) 1326, 1583, 1721, 1777
SmlI CTYRAG 5 cut(s) 185, 704, 959, 1046, 1256
SmoI CTYRAG 5 cut(s) 185, 704, 959, 1046, 1256
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 2 cut(s) 731, 1101
SstI GAGCTC 2 cut(s) 457, 1608
StyD4I CCNGG 6 cut(s) 219, 240, 345, 639, 1068, 1662
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 1057, 1291
TaqI TCGA 8 cut(s) 20, 516, 552, 812, 1014, 1179, 1257, 1903
TaqII GACCGA 1 cut(s) 119
TatI WGTACW 1 cut(s) 474
TauI GCSGC 9 cut(s) 203, 264, 318, 321, 324, 327, 330, 428, 571
TfiI GAWTC 6 cut(s) 128, 363, 544, 631, 839, 1382
Tru1I TTAA 5 cut(s) 435, 504, 672, 1155, 1206
Tru9I TTAA 5 cut(s) 435, 504, 672, 1155, 1206
TscAI CASTG 2 cut(s) 1373, 1728
TseFI GTSAC 1 cut(s) 1723
TseI GCWGC 2 cut(s) 207, 466
Tsp45I GTSAC 1 cut(s) 1723
TspGWI ACGGA 1 cut(s) 1304
TspRI CASTG 2 cut(s) 1373, 1728
VpaK11BI GGWCC 8 cut(s) 78, 98, 175, 692, 880, 1107, 1284, 1427
VspI ATTAAT 2 cut(s) 1155, 1206
XagI CCTNNNNNAGG 1 cut(s) 185
XapI RAATTY 3 cut(s) 1337, 1493, 1899
XcmI CCANNNNNNNNNTGG 1 cut(s) 88
XhoI CTCGAG 1 cut(s) 1256
XmnI GAANNNNTTC 2 cut(s) 1493, 1899
XspI CTAG 2 cut(s) 731, 1101
ZrmI AGTACT 1 cut(s) 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.