FvH4_2g34560

BRI1 kinase inhibitor 1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
25641299 .. 25642258
960 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g34560.t1

Sequence Viewer

Length: 960 bp
ATGGACACCGCCCATCTGCTTGAAAAGACCAGAGAAAAAGCTGCAGGCAACAAGATGCTGCAAGAAAAGCCACAGTCACCAGCTACAGCCTCACCACCATCAGCTTCCTCTTCTCCTTCTCATGAATTCTCCTTCACAATCTCTCTTCATCACTCTTCTTCCGCATCACTCCCTGATCATAGTAACAAGAACAACAGAAACAAAGCCAAAACCCCGCCTTCTTTCGCTATCGACTTGTCTCCTGCAGATGACATTTTCTTCCATGGCCATTTGCTTCCTTTGCAGTTCCTCTCTCACCTTCCTGTCTCTCCTCGCTCCTCTACTAACTCCTTAGACAGCTTCACTCTTCCCATTACAGACTTAGTGAACGATCAAGAACCAACCAAGGAAAGCAACAACTGTAGCACCAGCATTGAGAGCAACAACATCATCAACAAGAAGAAGAGCAACAGCAGCAGCAATATCCAAGACGGCAAGAGCCACAATGGCGAGACGAGGGGGAGAACCAAGTCCAAGTCCTTTTCCATTTTCGGGTTACCAAAAAGGCGAAAAGATTGCGAAGAGAGGGAGGACAAGGAGGGGATGAAGCAGAAGAACAAGATGAGGTTTGATGTGAGTAATATACTAAAGAGGTATGCGAGAATGGTCAGGCCCTTATTGTTCTTTAGAGGAAGAAAAGAGAATGTTCATTTCAGTAGGCAGCCTTATTCGTTTTCGGGTAATTTGAGCCCCAGAAATGGGCATCACTTGAGAGGAAGGAGAGGAGAGTTCTCAGCACCTGCATCAATGAGAACGTCTCCAACAAATAGTGGGCTTCTTCTAGCAACTTCAGGAGCATCTACTCCTCCTACTAATCCCAACGATAGCACCATGGAAGAGTTGCAAGCAGCAATTCAAGCTGCAATTGCTCATTGCAAGAATTCCATTGCCACAGAAGAGAAGATCAAATGCTTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

320

Amino Acids

35.28

Weight (kDa)

9.67

Isoelectric Point (pI)

63.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012335)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 787
Acc36I ACCTGC 1 cut(s) 787
AciI CCGC 3 cut(s) 9, 162, 215
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 2 cut(s) 125, 919
AcuI CTGAAG 1 cut(s) 813
AfiI CCNNNNNNNGG 3 cut(s) 531, 737, 738
AgsI TTSAA 2 cut(s) 23, 896
AluBI AGCT 5 cut(s) 41, 83, 104, 339, 899
AluI AGCT 5 cut(s) 41, 83, 104, 339, 899
Alw26I GTCTC 4 cut(s) 243, 310, 485, 801
AlwNI CAGNNNCTG 1 cut(s) 779
AoxI GGCC 2 cut(s) 265, 650
ApeKI GCWGC 7 cut(s) 41, 58, 453, 456, 700, 887, 899
ApoI RAATTY 2 cut(s) 125, 919
AspS9I GGNCC 1 cut(s) 651
AsuHPI GGTGA 3 cut(s) 69, 84, 287
BalI TGGCCA 1 cut(s) 267
BanII GRGCYC 1 cut(s) 731
BbvI GCAGC 7 cut(s) 28, 45, 465, 468, 712, 886, 899
BccI CCATC 2 cut(s) 21, 106
BceAI ACGGC 1 cut(s) 487
BcgI CGANNNNNNTGC 2 cut(s) 537, 571
BclI TGATCA 1 cut(s) 175
BcoDI GTCTC 4 cut(s) 243, 310, 485, 801
BfaI CTAG 1 cut(s) 821
BfmI CTRYAG 4 cut(s) 42, 84, 243, 400
BfuAI ACCTGC 1 cut(s) 787
BglI GCCNNNNNGGC 1 cut(s) 486
BisI GCNGC 7 cut(s) 42, 59, 454, 457, 701, 888, 900
BlsI GCNGC 7 cut(s) 43, 60, 455, 458, 702, 889, 901
BmgT120I GGNCC 1 cut(s) 651
BmsI GCATC 5 cut(s) 45, 173, 751, 791, 845
BplI GAGNNNNNCTC 2 cut(s) 781, 813
BpuEI CTTGAG 1 cut(s) 769
BsaJI CCNNGG 3 cut(s) 262, 384, 870
Bsc4I CCNNNNNNNGG 3 cut(s) 531, 737, 738
Bse3DI GCAATG 2 cut(s) 910, 924
BseDI CCNNGG 3 cut(s) 262, 384, 870
BseGI GGATG 1 cut(s) 588
BseLI CCNNNNNNNGG 3 cut(s) 531, 737, 738
BseMI GCAATG 2 cut(s) 910, 924
BseMII CTCAG 1 cut(s) 786
BseRI GAGGAG 4 cut(s) 300, 307, 777, 834
BseXI GCAGC 7 cut(s) 28, 45, 465, 468, 712, 886, 899
BshFI GGCC 2 cut(s) 267, 652
BslI CCNNNNNNNGG 3 cut(s) 531, 737, 738
BsmAI GTCTC 4 cut(s) 243, 310, 485, 801
BsmBI CGTCTC 2 cut(s) 485, 801
BsnI GGCC 2 cut(s) 267, 652
Bsp1286I GDGCHC 1 cut(s) 731
Bsp143I GATC 3 cut(s) 175, 370, 942
Bsp19I CCATGG 2 cut(s) 262, 870
BspACI CCGC 3 cut(s) 9, 162, 215
BspANI GGCC 2 cut(s) 267, 652
BspCNI CTCAG 1 cut(s) 785
BspHI TCATGA 1 cut(s) 121
BspMAI CTGCAG 2 cut(s) 46, 247
BspMI ACCTGC 1 cut(s) 787
BspQI GCTCTTC 1 cut(s) 437
BsrDI GCAATG 2 cut(s) 910, 924
BssECI CCNNGG 3 cut(s) 262, 384, 870
BssMI GATC 3 cut(s) 175, 370, 942
BssT1I CCWWGG 3 cut(s) 262, 384, 870
Bst4CI ACNGT 2 cut(s) 75, 401
Bst6I CTCTTC 8 cut(s) 115, 150, 160, 351, 437, 555, 870, 930
BstC8I GCNNGC 2 cut(s) 46, 885
BstDEI CTNAG 4 cut(s) 331, 361, 772, 952
BstDSI CCRYGG 2 cut(s) 262, 870
BstEII GGTNACC 1 cut(s) 534
BstF5I GGATG 1 cut(s) 588
BstKTI GATC 3 cut(s) 178, 373, 945
BstMAI GTCTC 4 cut(s) 243, 310, 485, 801
BstMBI GATC 3 cut(s) 175, 370, 942
BstMWI GCNNNNNNNGC 7 cut(s) 67, 280, 417, 453, 486, 896, 905
BstPI GGTNACC 1 cut(s) 534
BstSFI CTRYAG 4 cut(s) 42, 84, 243, 400
BstV1I GCAGC 7 cut(s) 28, 45, 465, 468, 712, 886, 899
BsuRI GGCC 2 cut(s) 267, 652
BtgI CCRYGG 2 cut(s) 262, 870
BtsCI GGATG 1 cut(s) 588
BveI ACCTGC 1 cut(s) 787
Cac8I GCNNGC 2 cut(s) 46, 885
CaiI CAGNNNCTG 1 cut(s) 779
CciI TCATGA 1 cut(s) 121
Cfr13I GGNCC 1 cut(s) 651
CviAII CATG 3 cut(s) 122, 263, 871
DdeI CTNAG 4 cut(s) 331, 361, 772, 952
DpnI GATC 3 cut(s) 177, 372, 944
DpnII GATC 3 cut(s) 175, 370, 942
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 8 cut(s) 115, 150, 160, 351, 437, 555, 870, 930
EarI CTCTTC 8 cut(s) 115, 150, 160, 351, 437, 555, 870, 930
Eco130I CCWWGG 3 cut(s) 262, 384, 870
Eco24I GRGCYC 1 cut(s) 731
Eco57I CTGAAG 1 cut(s) 813
Eco91I GGTNACC 1 cut(s) 534
EcoO109I RGGNCCY 1 cut(s) 651
EcoO65I GGTNACC 1 cut(s) 534
EcoRI GAATTC 2 cut(s) 125, 919
EcoT14I CCWWGG 3 cut(s) 262, 384, 870
EcoT38I GRGCYC 1 cut(s) 731
ErhI CCWWGG 3 cut(s) 262, 384, 870
Esp3I CGTCTC 2 cut(s) 485, 801
FaeI CATG 3 cut(s) 125, 266, 874
FaiI YATR 6 cut(s) 123, 180, 264, 623, 636, 872
FatI CATG 3 cut(s) 121, 262, 870
FauI CCCGC 1 cut(s) 222
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 7 cut(s) 42, 59, 454, 457, 701, 888, 900
FokI GGATG 1 cut(s) 595
FriOI GRGCYC 1 cut(s) 731
Fsp4HI GCNGC 7 cut(s) 42, 59, 454, 457, 701, 888, 900
FspBI CTAG 1 cut(s) 821
GluI GCNGC 7 cut(s) 42, 59, 454, 457, 701, 888, 900
HaeIII GGCC 2 cut(s) 267, 652
Hin1II CATG 3 cut(s) 125, 266, 874
HphI GGTGA 3 cut(s) 69, 84, 287
Hpy166II GTNNAC 1 cut(s) 367
Hpy188III TCNNGA 3 cut(s) 122, 374, 831
Hpy8I GTNNAC 1 cut(s) 367
HpyAV CCTTC 5 cut(s) 126, 142, 228, 308, 750
HpyCH4III ACNGT 2 cut(s) 75, 401
HpyCH4IV ACGT 1 cut(s) 794
HpyCH4V TGCA 8 cut(s) 44, 61, 245, 283, 782, 883, 902, 915
HpyF10VI GCNNNNNNNGC 7 cut(s) 67, 280, 417, 453, 486, 896, 905
HpyF3I CTNAG 4 cut(s) 331, 361, 772, 952
HpySE526I ACGT 1 cut(s) 794
Hsp92II CATG 3 cut(s) 125, 266, 874
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 3 cut(s) 175, 370, 942
LguI GCTCTTC 1 cut(s) 437
LmnI GCTCC 2 cut(s) 320, 833
Lsp1109I GCAGC 7 cut(s) 28, 45, 465, 468, 712, 886, 899
LweI GCATC 5 cut(s) 45, 173, 751, 791, 845
MaeI CTAG 1 cut(s) 821
MaeII ACGT 1 cut(s) 794
MaeIII GTNAC 3 cut(s) 75, 182, 534
MalI GATC 3 cut(s) 177, 372, 944
MboI GATC 3 cut(s) 175, 370, 942
MfeI CAATTG 1 cut(s) 903
MhlI GDGCHC 1 cut(s) 731
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 5 cut(s) 125, 721, 891, 903, 919
MluNI TGGCCA 1 cut(s) 267
MmeI TCCRAC 1 cut(s) 824
Mox20I TGGCCA 1 cut(s) 267
MscI TGGCCA 1 cut(s) 267
Msp20I TGGCCA 1 cut(s) 267
MunI CAATTG 1 cut(s) 903
MwoI GCNNNNNNNGC 7 cut(s) 67, 280, 417, 453, 486, 896, 905
NcoI CCATGG 2 cut(s) 262, 870
NdeII GATC 3 cut(s) 175, 370, 942
NlaIII CATG 3 cut(s) 125, 266, 874
NmuCI GTSAC 1 cut(s) 75
PagI TCATGA 1 cut(s) 121
PaqCI CACCTGC 1 cut(s) 787
PciSI GCTCTTC 1 cut(s) 437
PkrI GCNGC 7 cut(s) 43, 60, 455, 458, 702, 889, 901
PspEI GGTNACC 1 cut(s) 534
PspPI GGNCC 1 cut(s) 651
PstI CTGCAG 2 cut(s) 46, 247
PstNI CAGNNNCTG 1 cut(s) 779
SapI GCTCTTC 1 cut(s) 437
SatI GCNGC 7 cut(s) 42, 59, 454, 457, 701, 888, 900
Sau3AI GATC 3 cut(s) 175, 370, 942
Sau96I GGNCC 1 cut(s) 651
SduI GDGCHC 1 cut(s) 731
SfaNI GCATC 5 cut(s) 45, 173, 751, 791, 845
SfcI CTRYAG 4 cut(s) 42, 84, 243, 400
SmlI CTYRAG 1 cut(s) 748
SmoI CTYRAG 1 cut(s) 748
Sse9I AATT 5 cut(s) 125, 721, 891, 903, 919
SsiI CCGC 3 cut(s) 9, 162, 215
SspMI CTAG 1 cut(s) 821
StyI CCWWGG 3 cut(s) 262, 384, 870
TaaI ACNGT 2 cut(s) 75, 401
TaiI ACGT 1 cut(s) 797
TaqI TCGA 1 cut(s) 231
TasI AATT 5 cut(s) 125, 721, 891, 903, 919
TseFI GTSAC 1 cut(s) 75
TseI GCWGC 7 cut(s) 41, 58, 453, 456, 700, 887, 899
Tsp45I GTSAC 1 cut(s) 75
TspDTI ATGAA 4 cut(s) 137, 138, 599, 677
XapI RAATTY 2 cut(s) 125, 919
XspI CTAG 1 cut(s) 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.