pycom15g07930

BRI1 kinase inhibitor 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012335
Physical Location & Seq
Reverse (-)
4921208 .. 4922179
972 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g07930.1

Sequence Viewer

Length: 972 bp
ATGGCCACGCATCAGCTGGAAAAAACCAGAGAAATGGCTCTGGACACCTTCAGCAGGCATGAAGAAGAAAGGTTAAAACCGTTGCCAAAAACTGCCCCTGCCTCACCACCTTCATCTTCCTCCTCCCCCTCCCATGAATTCTCCTTCACTCTCTCGCTCCACACTTCTTCTTCCACATCAAACCCTAATCACCAATCCAAATCCAAAACCACCACCCCACCTTCTTTCGCCATTGATTTGTCCCCCGCAGACGAAATATTCTTCCACGGCCACCTCCTTCCTCTCCAGTTTCTCTCTCACCTGCCCGTCTCGCCTCGCTCCTCCACCAACTCCCTCGACAGCTTCACCCTCCCCATCAAAGAGCCGCTAGAAGATCAAAAACCAGCCAGGGAAACCGCTACCACCTATGCCGAAAACTGCATTCGAAACCGAAACATCCTAAACAACAAGAACAACAGCTGCAGCAGCATTGACAAGAGAATCCCACGTCAGGGAAGCAAACACGAGACCAGGGGAGGAACAAAGTCCAAGTCCTTTTCAATTTTCGGGCTTCCCAGATGGCGAAAAAATTGTGAAAATGATGAAAAGGAGGAGAACAAGGAGATGAAGAACAAGAGGAAGGTGAAGTTTGATATTAGTCAAATACTGAAGAGGTACGTGAGAATGGTGAGGCCGCTGTTGTTGTTTAGAGGGAGGAGAGAGAAGGGGCAGTTACGACGACAACCCTATTCGTTTTCAGGGAATTTGAGTATGTTAAACAAGCATGAGTTGAAAGGTGGGAGGGGGGAGTTTTCGGCTCCGGCATCGATAAGGACGTCTCCAACGAATAGCGGGCATCTTGTTGCAAGTGCTGCCACTAATGTTCCTTGTTCTACAAGTGACAGCACCATGGAAGAGTTGCAGGCTGCAATTCAAGCTGCAATTGCTCACTGCAAGAACTCCAATGCCACAGAAGAGAAGCCCAAATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
No domains found.

Protein Analysis

324

Amino Acids

36.14

Weight (kDa)

9.71

Isoelectric Point (pI)

59.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012335)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G42750
fragaria_vesca FvH4_2g34560
malus_domestica MD08G1102600.v1.1 MD15G1084100.v1.1
prunus_persica Prupe.1G437500_v2.0.a1
pyrus_communis pycom08g08410 pycom15g07930
rosa_chinensis RchiOBHm_Chr6g0307601 RchiOBHm_Chr6g0307761
rosa_laevigata RLG00000010702
rosa_multiflora Rmu_co8485591.1_g000001 Rmu_sc0000031.1_g000029
rosa_roxburghii Rroxscaffold_7G00160910
rosa_rugosa Rorug06G0360600
rosa_samantha Rh6AG469700 Rh6BG480200 Rh6CG485900 Rh6DG472400
rosa_wichuraiana Rw6G041010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 309
AatII GACGTC 1 cut(s) 818
Acc36I ACCTGC 1 cut(s) 309
AciI CCGC 5 cut(s) 246, 365, 396, 674, 831
AcoI YGGCCR 2 cut(s) 3, 268
AcsI RAATTY 2 cut(s) 137, 742
AcuI CTGAAG 2 cut(s) 34, 668
AcyI GRCGYC 1 cut(s) 815
AfaI GTAC 1 cut(s) 656
AfiI CCNNNNNNNGG 3 cut(s) 54, 490, 491
AgsI TTSAA 3 cut(s) 540, 772, 914
AjiI CACGTC 1 cut(s) 488
AjnI CCWGG 2 cut(s) 386, 509
AluBI AGCT 4 cut(s) 16, 342, 459, 917
AluI AGCT 4 cut(s) 16, 342, 459, 917
Alw26I GTCTC 3 cut(s) 313, 500, 822
AoxI GGCC 3 cut(s) 3, 268, 671
ApeKI GCWGC 6 cut(s) 459, 462, 465, 851, 905, 917
ApoI RAATTY 2 cut(s) 137, 742
ArsI GACNNNNNNTTYG 2 cut(s) 515, 547
AsuHPI GGTGA 6 cut(s) 96, 182, 290, 337, 634, 679
AsuII TTCGAA 1 cut(s) 424
BalI TGGCCA 1 cut(s) 5
BauI CACGAG 1 cut(s) 503
BbvI GCAGC 6 cut(s) 446, 474, 477, 838, 892, 904
BccI CCATC 2 cut(s) 362, 552
BceAI ACGGC 1 cut(s) 283
BciT130I CCWGG 2 cut(s) 388, 511
BcoDI GTCTC 3 cut(s) 313, 500, 822
BfaI CTAG 1 cut(s) 368
BfmI CTRYAG 1 cut(s) 460
BfuAI ACCTGC 1 cut(s) 309
BisI GCNGC 8 cut(s) 365, 460, 463, 466, 674, 852, 906, 918
BlsI GCNGC 8 cut(s) 366, 461, 464, 467, 675, 853, 907, 919
Bme1390I CCNGG 2 cut(s) 388, 511
BmgBI CACGTC 1 cut(s) 488
BmiI GGNNCC 1 cut(s) 798
BmrFI CCNGG 2 cut(s) 388, 511
BmsI GCATC 3 cut(s) 19, 812, 844
BpmI CTGGAG 1 cut(s) 269
Bpu14I TTCGAA 1 cut(s) 424
Bsa29I ATCGAT 1 cut(s) 806
BsaAI YACGTR 1 cut(s) 658
BsaHI GRCGYC 1 cut(s) 815
BsaI GGTCTC 1 cut(s) 500
BsaJI CCNNGG 4 cut(s) 265, 387, 510, 888
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 490, 491
Bse1I ACTGG 1 cut(s) 286
BseBI CCWGG 2 cut(s) 388, 511
BseCI ATCGAT 1 cut(s) 806
BseDI CCNNGG 4 cut(s) 265, 387, 510, 888
BseGI GGATG 1 cut(s) 435
BseLI CCNNNNNNNGG 3 cut(s) 54, 490, 491
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 4 cut(s) 112, 310, 605, 709
BseXI GCAGC 6 cut(s) 446, 474, 477, 838, 892, 904
BshFI GGCC 3 cut(s) 5, 270, 673
BshVI ATCGAT 1 cut(s) 806
BsiSI CCGG 1 cut(s) 800
BslFI GGGAC 1 cut(s) 226
BslI CCNNNNNNNGG 3 cut(s) 54, 490, 491
BsmAI GTCTC 3 cut(s) 313, 500, 822
BsmBI CGTCTC 2 cut(s) 313, 822
BsmFI GGGAC 1 cut(s) 226
BsmI GAATGC 1 cut(s) 420
BsnI GGCC 3 cut(s) 5, 270, 673
Bso31I GGTCTC 1 cut(s) 500
Bsp119I TTCGAA 1 cut(s) 424
Bsp143I GATC 1 cut(s) 373
Bsp19I CCATGG 1 cut(s) 888
BspACI CCGC 5 cut(s) 246, 365, 396, 674, 831
BspANI GGCC 3 cut(s) 5, 270, 673
BspDI ATCGAT 1 cut(s) 806
BspLI GGNNCC 1 cut(s) 798
BspMAI CTGCAG 1 cut(s) 464
BspMI ACCTGC 1 cut(s) 309
BspT104I TTCGAA 1 cut(s) 424
BspTNI GGTCTC 1 cut(s) 500
BsrI ACTGG 1 cut(s) 286
BssECI CCNNGG 4 cut(s) 265, 387, 510, 888
BssMI GATC 1 cut(s) 373
BssNI GRCGYC 1 cut(s) 815
BssSI CACGAG 1 cut(s) 503
BssT1I CCWWGG 1 cut(s) 888
Bst2BI CACGAG 1 cut(s) 503
Bst2UI CCWGG 2 cut(s) 388, 511
Bst4CI ACNGT 1 cut(s) 81
Bst6I CTCTTC 3 cut(s) 644, 888, 948
BstACI GRCGYC 1 cut(s) 815
BstAPI GCANNNNNTGC 1 cut(s) 851
BstBAI YACGTR 1 cut(s) 658
BstBI TTCGAA 1 cut(s) 424
BstC8I GCNNGC 3 cut(s) 56, 833, 903
BstDSI CCRYGG 2 cut(s) 265, 888
BstENI CCTNNNNNAGG 1 cut(s) 52
BstF5I GGATG 1 cut(s) 435
BstKTI GATC 1 cut(s) 376
BstMAI GTCTC 3 cut(s) 313, 500, 822
BstMBI GATC 1 cut(s) 373
BstMWI GCNNNNNNNGC 5 cut(s) 310, 465, 851, 914, 923
BstNI CCWGG 2 cut(s) 388, 511
BstSCI CCNGG 2 cut(s) 386, 509
BstSFI CTRYAG 1 cut(s) 460
BstV1I GCAGC 6 cut(s) 446, 474, 477, 838, 892, 904
BstXI CCANNNNNNTGG 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 806
BsuRI GGCC 3 cut(s) 5, 270, 673
BsuTUI ATCGAT 1 cut(s) 806
BtgI CCRYGG 2 cut(s) 265, 888
BtrI CACGTC 1 cut(s) 488
BtsCI GGATG 1 cut(s) 435
BtsI GCAGTG 1 cut(s) 928
BtsIMutI CAGTG 1 cut(s) 928
BveI ACCTGC 1 cut(s) 309
Cac8I GCNNGC 3 cut(s) 56, 833, 903
ClaI ATCGAT 1 cut(s) 806
Csp6I GTAC 1 cut(s) 655
CviAII CATG 4 cut(s) 59, 134, 764, 889
CviQI GTAC 1 cut(s) 655
DpnI GATC 1 cut(s) 375
DpnII GATC 1 cut(s) 373
EaeI YGGCCR 2 cut(s) 3, 268
Eam1104I CTCTTC 3 cut(s) 644, 888, 948
EarI CTCTTC 3 cut(s) 644, 888, 948
Eco130I CCWWGG 1 cut(s) 888
Eco31I GGTCTC 1 cut(s) 500
Eco57I CTGAAG 2 cut(s) 34, 668
EcoNI CCTNNNNNAGG 1 cut(s) 52
EcoRI GAATTC 1 cut(s) 137
EcoRII CCWGG 2 cut(s) 386, 509
EcoT14I CCWWGG 1 cut(s) 888
ErhI CCWWGG 1 cut(s) 888
Esp3I CGTCTC 2 cut(s) 313, 822
FaeI CATG 4 cut(s) 62, 137, 767, 892
FaiI YATR 6 cut(s) 60, 135, 408, 752, 765, 890
FaqI GGGAC 1 cut(s) 226
FatI CATG 4 cut(s) 58, 133, 763, 888
FauI CCCGC 2 cut(s) 253, 824
Fnu4HI GCNGC 8 cut(s) 365, 460, 463, 466, 674, 852, 906, 918
FokI GGATG 1 cut(s) 422
Fsp4HI GCNGC 8 cut(s) 365, 460, 463, 466, 674, 852, 906, 918
FspBI CTAG 1 cut(s) 368
GluI GCNGC 8 cut(s) 365, 460, 463, 466, 674, 852, 906, 918
GsuI CTGGAG 1 cut(s) 269
HaeIII GGCC 3 cut(s) 5, 270, 673
HapII CCGG 1 cut(s) 800
Hin1I GRCGYC 1 cut(s) 815
Hin1II CATG 4 cut(s) 62, 137, 767, 892
HinfI GANTC 1 cut(s) 480
HpaII CCGG 1 cut(s) 800
HphI GGTGA 6 cut(s) 96, 182, 290, 337, 634, 679
Hpy188III TCNNGA 1 cut(s) 41
Hpy99I CGWCG 1 cut(s) 720
HpyAV CCTTC 7 cut(s) 58, 120, 154, 231, 287, 613, 697
HpyCH4III ACNGT 1 cut(s) 81
HpyCH4IV ACGT 3 cut(s) 487, 657, 815
HpyCH4V TGCA 7 cut(s) 420, 462, 845, 901, 908, 920, 933
HpyF10VI GCNNNNNNNGC 5 cut(s) 310, 465, 851, 914, 923
HpySE526I ACGT 3 cut(s) 487, 657, 815
Hsp92I GRCGYC 1 cut(s) 815
Hsp92II CATG 4 cut(s) 62, 137, 767, 892
Kzo9I GATC 1 cut(s) 373
LmnI GCTCC 3 cut(s) 162, 323, 802
Lsp1109I GCAGC 6 cut(s) 446, 474, 477, 838, 892, 904
LweI GCATC 3 cut(s) 19, 812, 844
MaeI CTAG 1 cut(s) 368
MaeII ACGT 3 cut(s) 487, 657, 815
MaeIII GTNAC 2 cut(s) 711, 878
MalI GATC 1 cut(s) 375
MboI GATC 1 cut(s) 373
MfeI CAATTG 1 cut(s) 921
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 6 cut(s) 137, 540, 568, 742, 909, 921
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 845
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 74, 755
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 16, 459, 676
MspI CCGG 1 cut(s) 800
MspR9I CCNGG 2 cut(s) 388, 511
MunI CAATTG 1 cut(s) 921
Mva1269I GAATGC 1 cut(s) 420
MvaI CCWGG 2 cut(s) 388, 511
MwoI GCNNNNNNNGC 5 cut(s) 310, 465, 851, 914, 923
NcoI CCATGG 1 cut(s) 888
NdeII GATC 1 cut(s) 373
NlaIII CATG 4 cut(s) 62, 137, 767, 892
NlaIV GGNNCC 1 cut(s) 798
NmuCI GTSAC 1 cut(s) 878
NspV TTCGAA 1 cut(s) 424
PaqCI CACCTGC 1 cut(s) 309
PcsI WCGNNNNNNNCGW 2 cut(s) 812, 821
PctI GAATGC 1 cut(s) 420
PfeI GAWTC 1 cut(s) 480
PkrI GCNGC 8 cut(s) 366, 461, 464, 467, 675, 853, 907, 919
Ppu21I YACGTR 1 cut(s) 658
Psp6I CCWGG 2 cut(s) 386, 509
PspGI CCWGG 2 cut(s) 386, 509
PspN4I GGNNCC 1 cut(s) 798
PstI CTGCAG 1 cut(s) 464
PvuII CAGCTG 2 cut(s) 16, 459
RsaI GTAC 1 cut(s) 656
RsaNI GTAC 1 cut(s) 655
SaqAI TTAA 2 cut(s) 74, 755
SatI GCNGC 8 cut(s) 365, 460, 463, 466, 674, 852, 906, 918
Sau3AI GATC 1 cut(s) 373
ScrFI CCNGG 2 cut(s) 388, 511
SfaNI GCATC 3 cut(s) 19, 812, 844
SfcI CTRYAG 1 cut(s) 460
SfuI TTCGAA 1 cut(s) 424
Sse9I AATT 6 cut(s) 137, 540, 568, 742, 909, 921
SsiI CCGC 5 cut(s) 246, 365, 396, 674, 831
SspI AATATT 1 cut(s) 258
SspMI CTAG 1 cut(s) 368
StyD4I CCNGG 2 cut(s) 386, 509
StyI CCWWGG 1 cut(s) 888
TaaI ACNGT 1 cut(s) 81
TaiI ACGT 3 cut(s) 490, 660, 818
TaqI TCGA 3 cut(s) 336, 424, 806
TasI AATT 6 cut(s) 137, 540, 568, 742, 909, 921
TauI GCSGC 2 cut(s) 367, 676
TfiI GAWTC 1 cut(s) 480
Tru1I TTAA 2 cut(s) 74, 755
Tru9I TTAA 2 cut(s) 74, 755
TscAI CASTG 1 cut(s) 935
TseFI GTSAC 1 cut(s) 878
TseI GCWGC 6 cut(s) 459, 462, 465, 851, 905, 917
Tsp45I GTSAC 1 cut(s) 878
TspDTI ATGAA 5 cut(s) 75, 102, 150, 597, 620
TspRI CASTG 1 cut(s) 935
XagI CCTNNNNNAGG 1 cut(s) 52
XapI RAATTY 2 cut(s) 137, 742
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XspI CTAG 1 cut(s) 368
ZraI GACGTC 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.