Rroxscaffold_7G00160910

BRI1 kinase inhibitor 1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
3780737 .. 3782974
2238 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00160910.1

Sequence Viewer

Length: 591 bp
ATGGACACCCATCAGCTTGAAAAGACCAGAGAAAAAGCTGCAGGCAACAACATGCTTCAAGAAAAGCCACAGTCACCGGTTACAGCCTCACCACCCTCAGCTTCCTCTTCTCCTTCTCATGAATTCTCCTTCACAGTCTCTCTTCATCACTCTTCTTCCACATCAATCCCTGATCATAGTAAGAACAACAACAAAGCCAAAACCTCGCCTTCTTTCGCTATTGACTTGTCTCCTGCAGATGACATTTTCTTCCATGGCCATTTGCTTCCTTTGCAGTTCCTCTCTCACCTTCCTCTCTCTCCTCGCTCCTCTACTAACTCCTTAGATAGCTTCACTCTTCCCATTAGAGACTTAGTAGACGATCAAGAACCAACCAAGGAAAGCAACAACTGTAGCACCAGCATTGGGAGCAACAACATCATCAACAAGAAGAAGAGCAACAGCAGCAGCAATATCCAAGAGAGCAAGAGCCGCAATGGCGAGACGAGGGGAGAACCAAGTCCAAGTCCTTTTCCATTTTCGGGTTACCAAAAAGGCGAAAAGATTACGAAGAGAGGGAGGACAAGGAGGGGAAGCACAAGAGGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

196

Amino Acids

21.45

Weight (kDa)

9.59

Isoelectric Point (pI)

67.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012335)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 357
AciI CCGC 1 cut(s) 472
AcoI YGGCCR 1 cut(s) 256
AcsI RAATTY 1 cut(s) 122
AfiI CCNNNNNNNGG 2 cut(s) 405, 521
AgeI ACCGGT 1 cut(s) 76
AgsI TTSAA 2 cut(s) 20, 59
AluBI AGCT 4 cut(s) 16, 38, 101, 330
AluI AGCT 4 cut(s) 16, 38, 101, 330
Alw26I GTCTC 4 cut(s) 142, 234, 342, 476
AoxI GGCC 1 cut(s) 256
ApeKI GCWGC 3 cut(s) 38, 444, 447
ApoI RAATTY 1 cut(s) 122
AsiGI ACCGGT 1 cut(s) 76
AsuHPI GGTGA 3 cut(s) 66, 81, 278
BalI TGGCCA 1 cut(s) 258
BbvCI CCTCAGC 1 cut(s) 97
BbvI GCAGC 3 cut(s) 25, 456, 459
BccI CCATC 1 cut(s) 18
BclI TGATCA 1 cut(s) 172
BcoDI GTCTC 4 cut(s) 142, 234, 342, 476
BfmI CTRYAG 3 cut(s) 39, 234, 391
BglI GCCNNNNNGGC 1 cut(s) 477
BisI GCNGC 4 cut(s) 39, 445, 448, 472
BlsI GCNGC 4 cut(s) 40, 446, 449, 473
Bpu10I CCTNAGC 1 cut(s) 97
BsaJI CCNNGG 2 cut(s) 253, 375
BsaWI WCCGGW 1 cut(s) 76
Bsc4I CCNNNNNNNGG 2 cut(s) 405, 521
Bse118I RCCGGY 1 cut(s) 76
Bse3DI GCAATG 1 cut(s) 481
BseDI CCNNGG 2 cut(s) 253, 375
BseLI CCNNNNNNNGG 2 cut(s) 405, 521
BseMI GCAATG 1 cut(s) 481
BseMII CTCAG 1 cut(s) 111
BseRI GAGGAG 2 cut(s) 291, 298
BseXI GCAGC 3 cut(s) 25, 456, 459
BshFI GGCC 1 cut(s) 258
BshTI ACCGGT 1 cut(s) 76
BsiSI CCGG 1 cut(s) 77
BslI CCNNNNNNNGG 2 cut(s) 405, 521
BsmAI GTCTC 4 cut(s) 142, 234, 342, 476
BsmBI CGTCTC 1 cut(s) 476
BsnI GGCC 1 cut(s) 258
Bsp143I GATC 2 cut(s) 172, 361
Bsp19I CCATGG 1 cut(s) 253
BspACI CCGC 1 cut(s) 472
BspANI GGCC 1 cut(s) 258
BspCNI CTCAG 1 cut(s) 110
BspHI TCATGA 1 cut(s) 118
BspMAI CTGCAG 2 cut(s) 43, 238
BspQI GCTCTTC 1 cut(s) 428
BsrDI GCAATG 1 cut(s) 481
BsrFI RCCGGY 1 cut(s) 76
BssAI RCCGGY 1 cut(s) 76
BssECI CCNNGG 2 cut(s) 253, 375
BssMI GATC 2 cut(s) 172, 361
BssT1I CCWWGG 2 cut(s) 253, 375
Bst4CI ACNGT 3 cut(s) 72, 136, 392
Bst6I CTCTTC 6 cut(s) 112, 147, 157, 342, 428, 545
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 3 cut(s) 97, 322, 352
BstDSI CCRYGG 1 cut(s) 253
BstEII GGTNACC 1 cut(s) 524
BstKTI GATC 2 cut(s) 175, 364
BstMAI GTCTC 4 cut(s) 142, 234, 342, 476
BstMBI GATC 2 cut(s) 172, 361
BstMWI GCNNNNNNNGC 5 cut(s) 271, 408, 444, 471, 477
BstNSI RCATGY 1 cut(s) 55
BstPI GGTNACC 1 cut(s) 524
BstSFI CTRYAG 3 cut(s) 39, 234, 391
BstV1I GCAGC 3 cut(s) 25, 456, 459
BsuRI GGCC 1 cut(s) 258
BtgI CCRYGG 1 cut(s) 253
Cac8I GCNNGC 1 cut(s) 43
CciI TCATGA 1 cut(s) 118
Cfr10I RCCGGY 1 cut(s) 76
CspAI ACCGGT 1 cut(s) 76
CviAII CATG 3 cut(s) 52, 119, 254
CviJI RGCY 9 cut(s) 16, 38, 67, 86, 101, 197, 258, 330, 471
CviKI_1 RGCY 9 cut(s) 16, 38, 67, 86, 101, 197, 258, 330, 471
DdeI CTNAG 3 cut(s) 97, 322, 352
DpnI GATC 2 cut(s) 174, 363
DpnII GATC 2 cut(s) 172, 361
EaeI YGGCCR 1 cut(s) 256
Eam1104I CTCTTC 6 cut(s) 112, 147, 157, 342, 428, 545
EarI CTCTTC 6 cut(s) 112, 147, 157, 342, 428, 545
Eco130I CCWWGG 2 cut(s) 253, 375
Eco91I GGTNACC 1 cut(s) 524
EcoO65I GGTNACC 1 cut(s) 524
EcoRI GAATTC 1 cut(s) 122
EcoT14I CCWWGG 2 cut(s) 253, 375
ErhI CCWWGG 2 cut(s) 253, 375
Esp3I CGTCTC 1 cut(s) 476
FaeI CATG 3 cut(s) 55, 122, 257
FaiI YATR 4 cut(s) 53, 120, 177, 255
FatI CATG 3 cut(s) 51, 118, 253
FbaI TGATCA 1 cut(s) 172
FblI GTMKAC 1 cut(s) 357
Fnu4HI GCNGC 4 cut(s) 39, 445, 448, 472
Fsp4HI GCNGC 4 cut(s) 39, 445, 448, 472
GluI GCNGC 4 cut(s) 39, 445, 448, 472
HaeIII GGCC 1 cut(s) 258
HapII CCGG 1 cut(s) 77
Hin1II CATG 3 cut(s) 55, 122, 257
HpaII CCGG 1 cut(s) 77
HphI GGTGA 3 cut(s) 66, 81, 278
Hpy166II GTNNAC 1 cut(s) 358
Hpy188III TCNNGA 3 cut(s) 59, 119, 365
Hpy8I GTNNAC 1 cut(s) 358
HpyAV CCTTC 4 cut(s) 123, 139, 219, 299
HpyCH4III ACNGT 3 cut(s) 72, 136, 392
HpyCH4V TGCA 3 cut(s) 41, 236, 274
HpyF10VI GCNNNNNNNGC 5 cut(s) 271, 408, 444, 471, 477
HpyF3I CTNAG 3 cut(s) 97, 322, 352
Hsp92II CATG 3 cut(s) 55, 122, 257
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 2 cut(s) 172, 361
LguI GCTCTTC 1 cut(s) 428
LmnI GCTCC 2 cut(s) 311, 408
LpnPI CCDG 6 cut(s) 27, 40, 90, 183, 246, 412
Lsp1109I GCAGC 3 cut(s) 25, 456, 459
MaeIII GTNAC 3 cut(s) 72, 79, 524
MalI GATC 2 cut(s) 174, 363
MboI GATC 2 cut(s) 172, 361
MboII GAAGA 9 cut(s) 99, 134, 144, 147, 241, 329, 442, 445, 562
MlsI TGGCCA 1 cut(s) 258
MluCI AATT 1 cut(s) 122
MluNI TGGCCA 1 cut(s) 258
Mox20I TGGCCA 1 cut(s) 258
MscI TGGCCA 1 cut(s) 258
Msp20I TGGCCA 1 cut(s) 258
MspI CCGG 1 cut(s) 77
MwoI GCNNNNNNNGC 5 cut(s) 271, 408, 444, 471, 477
NcoI CCATGG 1 cut(s) 253
NdeII GATC 2 cut(s) 172, 361
NlaIII CATG 3 cut(s) 55, 122, 257
NmuCI GTSAC 1 cut(s) 72
NspI RCATGY 1 cut(s) 55
PagI TCATGA 1 cut(s) 118
PciSI GCTCTTC 1 cut(s) 428
PinAI ACCGGT 1 cut(s) 76
PkrI GCNGC 4 cut(s) 40, 446, 449, 473
PspEI GGTNACC 1 cut(s) 524
PstI CTGCAG 2 cut(s) 43, 238
SapI GCTCTTC 1 cut(s) 428
SatI GCNGC 4 cut(s) 39, 445, 448, 472
Sau3AI GATC 2 cut(s) 172, 361
SetI ASST 6 cut(s) 18, 40, 103, 206, 291, 332
SfcI CTRYAG 3 cut(s) 39, 234, 391
Sse9I AATT 1 cut(s) 122
SsiI CCGC 1 cut(s) 472
StyI CCWWGG 2 cut(s) 253, 375
TaaI ACNGT 3 cut(s) 72, 136, 392
TasI AATT 1 cut(s) 122
TauI GCSGC 1 cut(s) 474
TseFI GTSAC 1 cut(s) 72
TseI GCWGC 3 cut(s) 38, 444, 447
Tsp45I GTSAC 1 cut(s) 72
TspDTI ATGAA 2 cut(s) 134, 135
XapI RAATTY 1 cut(s) 122
XceI RCATGY 1 cut(s) 55
XmiI GTMKAC 1 cut(s) 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.