Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0013169

Physical Location & Seq

Genomic Coordinates Forward (+)

28489011 .. 28493383

Gene Structure 4373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g39810.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGTCCACAACCTCAGCCCGAGCACGCCTCGCTCTCATAGCCCTCCTCTCCGCCGCCACGTTCTACTGTTTCTACAAATCTCGCCGCCTCAAACAGCGCAAAAAGCTCACCTTAAACCCTAACCCTAGCTCCTCCTCGCCTCGCACCGGCAAGCTCTTCTTCATTTCCCAAACCGGAACCTCCAAAGCCCTAGCTCGCCGTCTTCTCGATCTCCTCGCCGCCAACGGCCTCGCCTTCGAGCTCGTCGACGCCGCCAGCTACGAGCCGGAGGACCTCCCCAAGGAGGCGCTGGTACTCATCGTCGCCTCCACCTGGGACGATGGACAGCCGCCGGCGAGCGCCAGGTTCTTCACGAACTGGCTGGCGGAGAGCTCCGAGGACTTCAGAGTGGGGTCCATGCTGCTCTCGCGGTGCAGATTCTCCGTGTTCGGCGTCGGGAGCCGAGCCTACGGCGTGTCGTTCAATGCGGTGGGGAGGGAGTTGTCGAGGAGGATGAGGGCGCTGGGCGCCGCCGAGATATTGCCGGTTTGGGAAGGTGACGTGGACGACGGGGACATTGACGTGGTCTTTGAGGCTTGGAGTGGTAAGCTGATGAGGTTTTTGAAGGGCGGTGATGCCGAAAACGGTGTCGCATTGGGTAATGGAGGTGAAGCTGAGTACTCTGACGTGTCGGATGATGAAGAGGAGGAGGAGGAGGAGGCTGTGGTGGAGTCCGGAGTTGTTGATCTTGAGGACATTGTAGGTAAAGCACCTTCAAGGGGAGCGGTGACGGAGGCCAAAGCTAATGGGACAGTGAATGGTAAAAGAGATATGGTCACTCCGGTGATTCGGGCCAGTTTAGTGAAGCAGGGGTATAAAATTATTGGTTCGCATAGTGGTGTCAAAATTTGTAGATGGACAAAGTCGCAACTTAGAGGCCGAGGTGGTTGTTACAAACACTCGTTTTATGGCATAGAAAGTCATAGGTGCATGGAGACAACCCCTAGTTTGGCATGTGCCAATAAATGTGTTTTCTGTTGGAGACATCACACAAATCCTGTTGGAAAGAGTTGGCAGTGGAAGATGGATGATCCATTAGAGATTGTGAATACTGCCATAGACCTGCACAGTAAAATGATTAAGCAAATGAAAGGAGTTCCTGGAGTTACATTGGAGAGATTAACAGAGGGTCTTTCTCCCAGGCATTGTGCCTTGTCACTTGTTGGTGAACCTATTATGTATCCAGAGATTAATACACTAGTGGATGAGCTGCATCGTAGACGGATTTCTACTTTTCTAGTCACAAATGCTCAGTTTCCTGAAAAGATTAGAATGCTGAAACCTATTACACAGTTATATGTTAGTGTGGATGCTGCAACTAAAGAGAGTTTGAAGGCAATTGACAGACCACTTTTTGGAGATTTTTGGGAGCGATTCATTGATTCCCTGAAAGCTCTCAAGGAAAAACAGCAGCGAACTGTTTATCGCTTAACTTTGGTGAAAGGGTGGAATACAGAAGAAATTGAGGCTTATTATAACATCTTTAGCATTGGTAACCCGGATTTTGTTGAAATCAAAGGAGTTACATATTGTGGATCATCCGCTACCTCAAAGTTGACGATGGAGAATGTGCCCTGGCATGCTGATGTTAAAGCTTTTTCAGAGGCCTTGGCTTTGAGAAGTAACGGCGAGTATGAGGTTGCTTGTGAGCATGTCCACTCATGTTGTGTCCTCCTGGCAAAAACTAAAAAGTTCAAGGTCAATGGGCAGTGGTTCACATGGATCGACTATGAAAAGTTTCATGATCTGGTGGCTTCTGGAAAACCATTTGACAGTAATGATTATATGGCTGCCACACCTTCATGGGCTGTTTATGGGGCAGTGGAAGGTGGATTTGATCCCTATCAATCTCGATATAGGAAGGAGCGACATCACAGATCAAACCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Flavodoxin_1 Radical_SAM Wyosine_form

Protein Analysis

643

Amino Acids

71.7

Weight (kDa)

7.86

Isoelectric Point (pI)

38.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	52 - 193	3.2e-25	Flavodoxin
Radical_SAM	PF04055	329 - 505	1.6e-16	Radical SAM superfamily
Wyosine_form	PF08608	511 - 574	9.2e-24	Wyosine base formation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75200
fragaria_vesca	FvH4_2g39810 FvH4_2g39810
malus_domestica	MD08G1031900.v1.1 MD15G1027800.v1.1
prunus_persica	Prupe.1G379500_v2.0.a1 Prupe.1G379500_v2.0.a1
pyrus_communis	pycom08g02520 pycom15g02380
rosa_chinensis	RchiOBHm_Chr6g0301031
rosa_laevigata	RLG00000011283
rosa_multiflora	Rmu_co8483439.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167240
rosa_rugosa	Rorug06G0300100
rosa_samantha	Rh6AG414000 Rh6BG421000 Rh6CG428600 Rh6DG414000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
Acc36I	ACCTGC	1 cut(s)	1110
AccB1I	GGYRCC	1 cut(s)	506
AccB7I	CCANNNNNTGG	1 cut(s)	1394
AccBSI	CCGCTC	1 cut(s)	764
AccI	GTMKAC	2 cut(s)	246, 1258
AccII	CGCG	1 cut(s)	409
AccIII	TCCGGA	1 cut(s)	713
AclWI	GGATC	4 cut(s)	1064, 1582, 1769, 1871
AcsI	RAATTY	1 cut(s)	885
AcuI	CTGAAG	1 cut(s)	367
AcyI	GRCGYC	3 cut(s)	249, 432, 507
AfaI	GTAC	2 cut(s)	294, 659
AfiI	CCNNNNNNNGG	7 cut(s)	146, 280, 283, 312, 758, 988, 1394
AflIII	ACRYGT	1 cut(s)	666
AgsI	TTSAA	6 cut(s)	463, 604, 756, 1372, 1550, 1735
AhlI	ACTAGT	1 cut(s)	1237
AjiI	CACGTC	3 cut(s)	541, 562, 667
AjnI	CCWGG	6 cut(s)	311, 341, 1138, 1178, 1613, 1713
AleI	CACNNNNGTG	1 cut(s)	821
Alw21I	GWGCWC	3 cut(s)	25, 243, 374
Alw26I	GTCTC	2 cut(s)	968, 1015
AlwI	GGATC	4 cut(s)	1064, 1582, 1769, 1871
Ama87I	CYCGRG	1 cut(s)	18
Aor13HI	TCCGGA	1 cut(s)	713
AoxI	GGCC	5 cut(s)	226, 774, 831, 916, 1644
ApeKI	GCWGC	5 cut(s)	400, 1249, 1352, 1450, 1829
ApoI	RAATTY	1 cut(s)	885
ArsI	GACNNNNNNTTYG	4 cut(s)	551, 583, 612, 644
AseI	ATTAAT	1 cut(s)	1230
Asp700I	GAANNNNTTC	1 cut(s)	1776
AspLEI	GCGC	5 cut(s)	99, 289, 341, 502, 509
AspS9I	GGNCC	3 cut(s)	271, 393, 831
AsuC2I	CCSGG	1 cut(s)	1538
AsuHPI	GGTGA	8 cut(s)	100, 548, 623, 659, 778, 835, 1217, 1489
AvaI	CYCGRG	1 cut(s)	18
AvaII	GGWCC	2 cut(s)	271, 393
BaeGI	GKGCMC	1 cut(s)	1614
BanI	GGYRCC	1 cut(s)	506
BanII	GRGCYC	2 cut(s)	243, 374
BarI	GAAGNNNNNNTAC	2 cut(s)	736, 768
BbsI	GAAGAC	1 cut(s)	194
Bbv12I	GWGCWC	3 cut(s)	25, 243, 374
BbvCI	CCTCAGC	1 cut(s)	13
BbvI	GCAGC	5 cut(s)	387, 1236, 1339, 1462, 1816
BccI	CCATC	4 cut(s)	314, 888, 1057, 1594
BceAI	ACGGC	4 cut(s)	183, 241, 466, 1681
BciT130I	CCWGG	6 cut(s)	313, 343, 1140, 1180, 1615, 1715
BciVI	GTATCC	1 cut(s)	1230
BcnI	CCSGG	1 cut(s)	1538
BcoDI	GTCTC	2 cut(s)	968, 1015
BcuI	ACTAGT	1 cut(s)	1237
BfaI	CTAG	5 cut(s)	126, 191, 984, 1238, 1277
BfoI	RGCGCY	4 cut(s)	290, 342, 503, 510
BfuAI	ACCTGC	1 cut(s)	1110
BfuI	GTATCC	1 cut(s)	1230
BmcAI	AGTACT	1 cut(s)	659
Bme1390I	CCNGG	7 cut(s)	313, 343, 1140, 1180, 1538, 1615, 1715
Bme18I	GGWCC	2 cut(s)	271, 393
BmeT110I	CYCGRG	1 cut(s)	18
BmgBI	CACGTC	3 cut(s)	541, 562, 667
BmgT120I	GGNCC	3 cut(s)	271, 393, 831
BmiI	GGNNCC	4 cut(s)	178, 394, 440, 508
BmrFI	CCNGG	7 cut(s)	313, 343, 1140, 1180, 1538, 1615, 1715
BmsI	GCATC	3 cut(s)	604, 1261, 1339
BpiI	GAAGAC	1 cut(s)	194
BplI	GAGNNNNNCTC	2 cut(s)	12, 44
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	1 cut(s)	13
BpuEI	CTTGAG	2 cut(s)	749, 1421
BpuMI	CCSGG	1 cut(s)	1538
BsaBI	GATNNNNATC	1 cut(s)	1881
BsaHI	GRCGYC	3 cut(s)	249, 432, 507
BsaJI	CCNNGG	7 cut(s)	279, 312, 375, 919, 1178, 1613, 1647
BsaWI	WCCGGW	3 cut(s)	173, 713, 820
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	7 cut(s)	146, 280, 283, 312, 758, 988, 1394
Bse118I	RCCGGY	3 cut(s)	146, 331, 523
Bse1I	ACTGG	2 cut(s)	362, 834
Bse8I	GATNNNNATC	1 cut(s)	1881
BseAI	TCCGGA	1 cut(s)	713
BseBI	CCWGG	6 cut(s)	313, 343, 1140, 1180, 1615, 1715
BseDI	CCNNGG	7 cut(s)	279, 312, 375, 919, 1178, 1613, 1647
BseGI	GGATG	6 cut(s)	498, 679, 1072, 1249, 1354, 1577
BseJI	GATNNNNATC	1 cut(s)	1881
BseLI	CCNNNNNNNGG	7 cut(s)	146, 280, 283, 312, 758, 988, 1394
BseMII	CTCAG	3 cut(s)	27, 645, 1304
BseNI	ACTGG	2 cut(s)	362, 834
BseSI	GKGCMC	1 cut(s)	1614
BseXI	GCAGC	5 cut(s)	387, 1236, 1339, 1462, 1816
BseYI	CCCAGC	1 cut(s)	502
BsgI	GTGCAG	2 cut(s)	433, 1088
Bsh1236I	CGCG	1 cut(s)	409
BshFI	GGCC	5 cut(s)	228, 776, 833, 918, 1646
BshNI	GGYRCC	1 cut(s)	506
BsiHKAI	GWGCWC	3 cut(s)	25, 243, 374
BsiHKCI	CYCGRG	1 cut(s)	18
BsiSI	CCGG	8 cut(s)	147, 174, 266, 332, 524, 714, 821, 1538
BslFI	GGGAC	3 cut(s)	329, 566, 802
BslI	CCNNNNNNNGG	7 cut(s)	146, 280, 283, 312, 758, 988, 1394
BsmAI	GTCTC	2 cut(s)	968, 1015
BsmFI	GGGAC	3 cut(s)	329, 566, 802
BsmI	GAATGC	1 cut(s)	1317
BsnI	GGCC	5 cut(s)	228, 776, 833, 918, 1646
BsoBI	CYCGRG	1 cut(s)	18
Bsp1286I	GDGCHC	4 cut(s)	25, 243, 374, 1614
Bsp13I	TCCGGA	1 cut(s)	713
Bsp143I	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
BspANI	GGCC	5 cut(s)	228, 776, 833, 918, 1646
BspCNI	CTCAG	3 cut(s)	26, 646, 1303
BspEI	TCCGGA	1 cut(s)	713
BspFNI	CGCG	1 cut(s)	409
BspHI	TCATGA	1 cut(s)	1780
BspLI	GGNNCC	4 cut(s)	178, 394, 440, 508
BspMI	ACCTGC	1 cut(s)	1110
BspPI	GGATC	4 cut(s)	1064, 1582, 1769, 1871
BspQI	GCTCTTC	1 cut(s)	161
BspT107I	GGYRCC	1 cut(s)	506
BsrBI	CCGCTC	1 cut(s)	764
BsrFI	RCCGGY	3 cut(s)	146, 331, 523
BsrI	ACTGG	2 cut(s)	362, 834
BssAI	RCCGGY	3 cut(s)	146, 331, 523
BssECI	CCNNGG	7 cut(s)	279, 312, 375, 919, 1178, 1613, 1647
BssMI	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
BssNI	GRCGYC	3 cut(s)	249, 432, 507
BssT1I	CCWWGG	2 cut(s)	279, 1647
Bst2UI	CCWGG	6 cut(s)	313, 343, 1140, 1180, 1615, 1715
Bst4CI	ACNGT	7 cut(s)	68, 626, 793, 1109, 1332, 1459, 1814
Bst6I	CTCTTC	2 cut(s)	161, 675
BstACI	GRCGYC	3 cut(s)	249, 432, 507
BstC8I	GCNNGC	8 cut(s)	25, 152, 196, 256, 333, 337, 363, 1620
BstDEI	CTNAG	4 cut(s)	13, 654, 911, 1290
BstEII	GGTNACC	1 cut(s)	1532
BstENI	CCTNNNNNAGG	1 cut(s)	278
BstF5I	GGATG	6 cut(s)	498, 679, 1072, 1249, 1354, 1577
BstFNI	CGCG	1 cut(s)	409
BstH2I	RGCGCY	4 cut(s)	290, 342, 503, 510
BstHHI	GCGC	5 cut(s)	99, 289, 341, 502, 509
BstKTI	GATC	8 cut(s)	211, 727, 1072, 1577, 1764, 1786, 1879, 1919
BstMAI	GTCTC	2 cut(s)	968, 1015
BstMBI	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
BstMWI	GCNNNNNNNGC	6 cut(s)	29, 38, 103, 406, 438, 506
BstNI	CCWGG	6 cut(s)	313, 343, 1140, 1180, 1615, 1715
BstNSI	RCATGY	3 cut(s)	996, 1622, 1694
BstPI	GGTNACC	1 cut(s)	1532
BstSCI	CCNGG	7 cut(s)	311, 341, 1138, 1178, 1536, 1613, 1713
BstSLI	GKGCMC	1 cut(s)	1614
BstUI	CGCG	1 cut(s)	409
BstV1I	GCAGC	5 cut(s)	387, 1236, 1339, 1462, 1816
BstV2I	GAAGAC	1 cut(s)	194
BsuI	GTATCC	1 cut(s)	1230
BsuRI	GGCC	5 cut(s)	228, 776, 833, 918, 1646
BtrI	CACGTC	3 cut(s)	541, 562, 667
BtsCI	GGATG	6 cut(s)	498, 679, 1072, 1249, 1354, 1577
BtsI	GCAGTG	3 cut(s)	1061, 1754, 1866
BtsIMutI	CAGTG	4 cut(s)	798, 1061, 1754, 1866
BveI	ACCTGC	1 cut(s)	1110
Cac8I	GCNNGC	8 cut(s)	25, 152, 196, 256, 333, 337, 363, 1620
CciI	TCATGA	1 cut(s)	1780
CfoI	GCGC	5 cut(s)	99, 289, 341, 502, 509
Cfr10I	RCCGGY	3 cut(s)	146, 331, 523
Cfr13I	GGNCC	3 cut(s)	271, 393, 831
CseI	GACGC	2 cut(s)	257, 421
Csp6I	GTAC	2 cut(s)	293, 658
CspCI	CAANNNNNGTGG	2 cut(s)	1685, 1720
CviAII	CATG	9 cut(s)	397, 970, 993, 1619, 1691, 1701, 1758, 1781, 1842
CviQI	GTAC	2 cut(s)	293, 658
DdeI	CTNAG	4 cut(s)	13, 654, 911, 1290
DinI	GGCGCC	1 cut(s)	508
DpnI	GATC	8 cut(s)	210, 726, 1071, 1576, 1763, 1785, 1878, 1918
DpnII	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
Eam1104I	CTCTTC	2 cut(s)	161, 675
EarI	CTCTTC	2 cut(s)	161, 675
EciI	GGCGGA	2 cut(s)	40, 380
Ecl136II	GAGCTC	2 cut(s)	241, 372
Eco130I	CCWWGG	2 cut(s)	279, 1647
Eco147I	AGGCCT	1 cut(s)	1646
Eco24I	GRGCYC	2 cut(s)	243, 374
Eco47I	GGWCC	2 cut(s)	271, 393
Eco53kI	GAGCTC	2 cut(s)	241, 372
Eco57I	CTGAAG	1 cut(s)	367
Eco88I	CYCGRG	1 cut(s)	18
Eco91I	GGTNACC	1 cut(s)	1532
EcoICRI	GAGCTC	2 cut(s)	241, 372
EcoNI	CCTNNNNNAGG	1 cut(s)	278
EcoO109I	RGGNCCY	1 cut(s)	271
EcoO65I	GGTNACC	1 cut(s)	1532
EcoRII	CCWGG	6 cut(s)	311, 341, 1138, 1178, 1613, 1713
EcoT14I	CCWWGG	2 cut(s)	279, 1647
EcoT38I	GRGCYC	2 cut(s)	243, 374
EgeI	GGCGCC	1 cut(s)	508
EheI	GGCGCC	1 cut(s)	508
ErhI	CCWWGG	2 cut(s)	279, 1647
FaeI	CATG	9 cut(s)	400, 973, 996, 1622, 1694, 1704, 1761, 1784, 1845
FalI	AAGNNNNNCTT	4 cut(s)	95, 127, 143, 175
FaqI	GGGAC	3 cut(s)	329, 566, 802
FatI	CATG	9 cut(s)	396, 969, 992, 1618, 1690, 1700, 1757, 1780, 1841
FblI	GTMKAC	2 cut(s)	246, 1258
FokI	GGATG	6 cut(s)	505, 686, 1079, 1256, 1361, 1564
FriOI	GRGCYC	2 cut(s)	243, 374
FspBI	CTAG	5 cut(s)	126, 191, 984, 1238, 1277
GlaI	GCGC	5 cut(s)	98, 288, 340, 501, 508
GsaI	CCCAGC	1 cut(s)	506
GsuI	CTGGAG	1 cut(s)	1161
HaeII	RGCGCY	4 cut(s)	290, 342, 503, 510
HaeIII	GGCC	5 cut(s)	228, 776, 833, 918, 1646
HapII	CCGG	8 cut(s)	147, 174, 266, 332, 524, 714, 821, 1538
HgaI	GACGC	2 cut(s)	257, 421
HhaI	GCGC	5 cut(s)	99, 289, 341, 502, 509
Hin1I	GRCGYC	3 cut(s)	249, 432, 507
Hin1II	CATG	9 cut(s)	400, 973, 996, 1622, 1694, 1704, 1761, 1784, 1845
Hin6I	GCGC	5 cut(s)	97, 287, 339, 500, 507
HinP1I	GCGC	5 cut(s)	97, 287, 339, 500, 507
HincII	GTYRAC	2 cut(s)	247, 1596
HindII	GTYRAC	2 cut(s)	247, 1596
HindIII	AAGCTT	1 cut(s)	1632
HinfI	GANTC	5 cut(s)	417, 710, 826, 1413, 1421
HpaII	CCGG	8 cut(s)	147, 174, 266, 332, 524, 714, 821, 1538
HphI	GGTGA	8 cut(s)	100, 548, 623, 659, 778, 835, 1217, 1489
Hpy166II	GTNNAC	8 cut(s)	6, 247, 544, 1208, 1259, 1596, 1696, 1755
Hpy188I	TCNGA	5 cut(s)	376, 386, 664, 673, 1642
Hpy8I	GTNNAC	8 cut(s)	6, 247, 544, 1208, 1259, 1596, 1696, 1755
Hpy99I	CGWCG	5 cut(s)	248, 251, 305, 437, 551
HpyAV	CCTTC	8 cut(s)	244, 527, 598, 762, 1366, 1848, 1859, 1894
HpyCH4III	ACNGT	7 cut(s)	68, 626, 793, 1109, 1332, 1459, 1814
HpyCH4IV	ACGT	4 cut(s)	59, 540, 561, 666
HpyCH4V	TGCA	5 cut(s)	414, 969, 1105, 1252, 1355
HpyF10VI	GCNNNNNNNGC	6 cut(s)	29, 38, 103, 406, 438, 506
HpyF3I	CTNAG	4 cut(s)	13, 654, 911, 1290
HpySE526I	ACGT	4 cut(s)	59, 540, 561, 666
Hsp92I	GRCGYC	3 cut(s)	249, 432, 507
Hsp92II	CATG	9 cut(s)	400, 973, 996, 1622, 1694, 1704, 1761, 1784, 1845
HspAI	GCGC	5 cut(s)	97, 287, 339, 500, 507
KasI	GGCGCC	1 cut(s)	506
Kpn2I	TCCGGA	1 cut(s)	713
KroI	GCCGGC	1 cut(s)	331
KroNI	GCCGGC	1 cut(s)	333
Kzo9I	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
LguI	GCTCTTC	1 cut(s)	161
LmnI	GCTCC	6 cut(s)	134, 377, 438, 761, 1408, 1903
Lsp1109I	GCAGC	5 cut(s)	387, 1236, 1339, 1462, 1816
LweI	GCATC	3 cut(s)	604, 1261, 1339
MaeI	CTAG	5 cut(s)	126, 191, 984, 1238, 1277
MaeII	ACGT	4 cut(s)	59, 540, 561, 666
MalI	GATC	8 cut(s)	210, 726, 1071, 1576, 1763, 1785, 1878, 1918
MbiI	CCGCTC	1 cut(s)	764
MboI	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
MboII	GAAGA	7 cut(s)	148, 151, 194, 340, 692, 1072, 1508
MfeI	CAATTG	1 cut(s)	1377
MhlI	GDGCHC	4 cut(s)	25, 243, 374, 1614
MluCI	AATT	4 cut(s)	858, 885, 1377, 1500
Mly113I	GGCGCC	1 cut(s)	507
MlyI	GAGTC	1 cut(s)	719
MmeI	TCCRAC	3 cut(s)	651, 998, 1021
MreI	CGCCGGCG	1 cut(s)	331
MroI	TCCGGA	1 cut(s)	713
MroNI	GCCGGC	1 cut(s)	331
MroXI	GAANNNNTTC	1 cut(s)	1776
MseI	TTAA	6 cut(s)	113, 1119, 1160, 1230, 1469, 1629
MslI	CAYNNNNRTG	5 cut(s)	560, 821, 876, 1623, 1840
MspI	CCGG	8 cut(s)	147, 174, 266, 332, 524, 714, 821, 1538
MspR9I	CCNGG	7 cut(s)	313, 343, 1140, 1180, 1538, 1615, 1715
MunI	CAATTG	1 cut(s)	1377
Mva1269I	GAATGC	1 cut(s)	1317
MvaI	CCWGG	6 cut(s)	313, 343, 1140, 1180, 1615, 1715
MvnI	CGCG	1 cut(s)	409
MwoI	GCNNNNNNNGC	6 cut(s)	29, 38, 103, 406, 438, 506
NaeI	GCCGGC	1 cut(s)	333
NarI	GGCGCC	1 cut(s)	507
NciI	CCSGG	1 cut(s)	1538
NdeII	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
NgoMIV	GCCGGC	1 cut(s)	331
NlaIII	CATG	9 cut(s)	400, 973, 996, 1622, 1694, 1704, 1761, 1784, 1845
NlaIV	GGNNCC	4 cut(s)	178, 394, 440, 508
NmeAIII	GCCGAG	3 cut(s)	467, 538, 944
NmuCI	GTSAC	5 cut(s)	536, 766, 814, 1194, 1279
NspI	RCATGY	3 cut(s)	996, 1622, 1694
OliI	CACNNNNGTG	1 cut(s)	821
PaeI	GCATGC	1 cut(s)	1622
PagI	TCATGA	1 cut(s)	1780
PceI	AGGCCT	1 cut(s)	1646
PciSI	GCTCTTC	1 cut(s)	161
PcsI	WCGNNNNNNNCGW	1 cut(s)	243
PctI	GAATGC	1 cut(s)	1317
PdiI	GCCGGC	1 cut(s)	333
PdmI	GAANNNNTTC	1 cut(s)	1776
PfeI	GAWTC	4 cut(s)	417, 826, 1413, 1421
PflFI	GACNNNGTC	2 cut(s)	563, 901
PflMI	CCANNNNNTGG	1 cut(s)	1394
PfoI	TCCNGGA	1 cut(s)	1138
PleI	GAGTC	1 cut(s)	718
PluTI	GGCGCC	1 cut(s)	510
PpsI	GAGTC	1 cut(s)	718
PpuMI	RGGWCCY	1 cut(s)	271
PshBI	ATTAAT	1 cut(s)	1230
PsiI	TTATAA	1 cut(s)	1515
Psp124BI	GAGCTC	2 cut(s)	243, 374
Psp5II	RGGWCCY	1 cut(s)	271
Psp6I	CCWGG	6 cut(s)	311, 341, 1138, 1178, 1613, 1713
PspEI	GGTNACC	1 cut(s)	1532
PspFI	CCCAGC	1 cut(s)	502
PspGI	CCWGG	6 cut(s)	311, 341, 1138, 1178, 1613, 1713
PspN4I	GGNNCC	4 cut(s)	178, 394, 440, 508
PspPI	GGNCC	3 cut(s)	271, 393, 831
PspPPI	RGGWCCY	1 cut(s)	271
PsyI	GACNNNGTC	2 cut(s)	563, 901
RsaI	GTAC	2 cut(s)	294, 659
RsaNI	GTAC	2 cut(s)	293, 658
RseI	CAYNNNNRTG	5 cut(s)	560, 821, 876, 1623, 1840
SacI	GAGCTC	2 cut(s)	243, 374
SalI	GTCGAC	1 cut(s)	245
SapI	GCTCTTC	1 cut(s)	161
SaqAI	TTAA	6 cut(s)	113, 1119, 1160, 1230, 1469, 1629
Sau3AI	GATC	8 cut(s)	208, 724, 1069, 1574, 1761, 1783, 1876, 1916
Sau96I	GGNCC	3 cut(s)	271, 393, 831
ScaI	AGTACT	1 cut(s)	659
SchI	GAGTC	1 cut(s)	719
ScrFI	CCNGG	7 cut(s)	313, 343, 1140, 1180, 1538, 1615, 1715
SduI	GDGCHC	4 cut(s)	25, 243, 374, 1614
SfaNI	GCATC	3 cut(s)	604, 1261, 1339
SfoI	GGCGCC	1 cut(s)	508
SgrAI	CRCCGGYG	1 cut(s)	331
SgrDI	CGTCGACG	1 cut(s)	245
SinI	GGWCC	2 cut(s)	271, 393
SmiMI	CAYNNNNRTG	5 cut(s)	560, 821, 876, 1623, 1840
SmlI	CTYRAG	2 cut(s)	728, 1436
SmoI	CTYRAG	2 cut(s)	728, 1436
SpeI	ACTAGT	1 cut(s)	1237
SphI	GCATGC	1 cut(s)	1622
Sse9I	AATT	4 cut(s)	858, 885, 1377, 1500
SseBI	AGGCCT	1 cut(s)	1646
SspDI	GGCGCC	1 cut(s)	506
SspMI	CTAG	5 cut(s)	126, 191, 984, 1238, 1277
SstI	GAGCTC	2 cut(s)	243, 374
StuI	AGGCCT	1 cut(s)	1646
StyD4I	CCNGG	7 cut(s)	311, 341, 1138, 1178, 1536, 1613, 1713
StyI	CCWWGG	2 cut(s)	279, 1647
TaaI	ACNGT	7 cut(s)	68, 626, 793, 1109, 1332, 1459, 1814
TaiI	ACGT	4 cut(s)	62, 543, 564, 669
TaqI	TCGA	6 cut(s)	207, 237, 246, 485, 1764, 1891
TasI	AATT	4 cut(s)	858, 885, 1377, 1500
TatI	WGTACW	1 cut(s)	657
TauI	GCSGC	6 cut(s)	56, 87, 221, 254, 331, 512
TfiI	GAWTC	4 cut(s)	417, 826, 1413, 1421
Tru1I	TTAA	6 cut(s)	113, 1119, 1160, 1230, 1469, 1629
Tru9I	TTAA	6 cut(s)	113, 1119, 1160, 1230, 1469, 1629
TscAI	CASTG	4 cut(s)	798, 1061, 1754, 1866
TseFI	GTSAC	5 cut(s)	536, 766, 814, 1194, 1279
TseI	GCWGC	5 cut(s)	400, 1249, 1352, 1450, 1829
Tsp45I	GTSAC	5 cut(s)	536, 766, 814, 1194, 1279
TspDTI	ATGAA	7 cut(s)	151, 693, 1142, 1405, 1769, 1785, 1830
TspGWI	ACGGA	3 cut(s)	412, 785, 1276
TspRI	CASTG	4 cut(s)	798, 1061, 1754, 1866
Tth111I	GACNNNGTC	2 cut(s)	563, 901
Van91I	CCANNNNNTGG	1 cut(s)	1394
VpaK11BI	GGWCC	2 cut(s)	271, 393
VspI	ATTAAT	1 cut(s)	1230
XagI	CCTNNNNNAGG	1 cut(s)	278
XapI	RAATTY	1 cut(s)	885
XceI	RCATGY	3 cut(s)	996, 1622, 1694
XcmI	CCANNNNNNNNNTGG	1 cut(s)	286
XmiI	GTMKAC	2 cut(s)	246, 1258
XmnI	GAANNNNTTC	1 cut(s)	1776
XspI	CTAG	5 cut(s)	126, 191, 984, 1238, 1277
ZrmI	AGTACT	1 cut(s)	659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.