Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0013169

Physical Location & Seq

Genomic Coordinates Forward (+)

2281426 .. 2285319

Gene Structure 3894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1031900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTCCTTCTCCTCCACCCCTGCGCGGCTCACTCTCCTCGCCCTCCTCTCCGCCACCACGGTCTACTGCTTCTACAAATCCCGCCGCCTCCGACGCCTCAAGCTCTCCCTAAACCCTAACTCTAGCTCCTCGCCTCGCAGAGGCAAGCTCTTCTTCGTCTCCCAAACCGGCACCTCCGAAGCTCTAGCTCGTCGCCTGCTCGATGTTCTGACGTCGAACGGCGTCGCTTTCGACCTCGTGGACCCCAGCAACTACGAGCCCGAGGACCTGCCGAAGGAAACCCTAGTTCTGATCGTCGCTTCGACGTGGGATGACGGGAAGCCGCCTCCGAACGCCAGATTCTTCTCCAATTGGCTCGCCGAGAGCGCGGAGGACTTCAGGGTGGGATCGCTGTTGCTCTCCAATTGCAAATTCGCCGTCTTCGGCGTCGGGAGCCGAGCCTATGGCGCTACGTTCAATGCGGTGGGGAAGGACTTGGCTAGGAGGATGAGGGCGTTGGGCGCTTCTGAGATGTTTCCGATTTGGGAAAGTGACGTGGACGGTGGTGATTTGGACGAGGTGTTTGATGCTTGGAGTGGGAAGGTGGTGAGGTTTCTGAAGGGTGGTGCGGCGGAAAATGGCGGGGTTTTGGGTAATGGGGTTGGCGATGAATGTGAAGCTGAGAGCTTTGATGGGTCAGACGAGGACGAGGAGGACGAGGAGGAGGATGGTGAGGAGTCAGGGGTTGTTGACCTTGAGGATATTGCAGGTAAAGGACCTTCAAGAAGGAATCCAGTGGCGGTGACGAAGACTAATGGGACAGTGAATGGTAAAAAAGAGATGGTCACTCCGGTGATTCGGGCTAGCTTAACGAAGCAGGGGTATAAAATCATTGGTTCACATAGTGGTGTCAAAATTTGTAGATGGACAAAGTCGCAGCTCCGAGGCCGTGGAGGTTGCTACAAGCACTCGTTTTATGGTATAGAAAGTCACAGGTGCATGGAGACAACCCCTAGTTTGGCATGTGCCAACAAATGTGTATTTTGTTGGAGACATCACACAAATCCTGTCGGAAAGAGTTGGCAGTGGAAGATGGATGATCCGTTAGAAATTGTTAACTCTGCCATAGACCAGCACACAAAAATGATCAAGCAAATGAAAGGAGTTCCTGGTGTTACATTGGAGCGATTAACAGAGGGTCTCTCTCCCAGGCATTGCGCCTTATCTCTTGTTGGTGAACCTATCATGTATCCTGAGATTAATTCACTCCTAGATGAGCTGCATCGAAGGCGGATTTCTACTTTTCTAGTCACAAATGCTCAGTTTCCTGAAAAGATCAAAATGCTGAACCCCATTACGCAGTTATATGTAAGTGTGGATGCTGCTACTAAAGAAAGTTTGAAGGCAATTGACAGGCCACTTTTTGGGGATTTTTGGGAGCGATTCATTGATTCCTTGACTTCTCTCAAGGATAAACAGCAACGAACTGTTTATCGCCTTACTCTGGTGAAAGGCTGGAATACAGAAGATATTGATGCTTATTATAACATTTTTAGCCTTGGTAGTCCTGATTTTGTTGAAATCAAGGGAGTTACATACTGTGGAACGTCTGCTACATCAAAGTTGACAATGGAGAATGTGCCCTGGCATGCCGATGTTAAAACATTTTCAGAGGCCTTAGCTTTGAAAAGTAACGGGGAGTATGAGGTTGCATGTGAGCATGTCCACTCTTGTTGTGTCCTCCTGGCTAAAACTAGCAAGTTCAAGATCAATGGCCAGTGGTTCACATGGATTGACTATGAAAAGTTTCACGATCTGGTGGCTTCTGGAAAACCTTTTGACAGTAAGGATTACATGGCTCCAACACCTTCATGGGCCGTGTATGGGGCAGATGAAGGTGGATTTGATCCGTACCAGTCTCGATACAAGAAAGAGCGCCATCACAGACCAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Flavodoxin_1 Radical_SAM Wyosine_form

Protein Analysis

646

Amino Acids

71.96

Weight (kDa)

6.32

Isoelectric Point (pI)

39.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	50 - 191	3.6e-27	Flavodoxin
Radical_SAM	PF04055	332 - 507	1.4e-14	Radical SAM superfamily
Wyosine_form	PF08608	514 - 577	2e-23	Wyosine base formation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75200
fragaria_vesca	FvH4_2g39810 FvH4_2g39810
malus_domestica	MD08G1031900.v1.1 MD15G1027800.v1.1
prunus_persica	Prupe.1G379500_v2.0.a1 Prupe.1G379500_v2.0.a1
pyrus_communis	pycom08g02520 pycom15g02380
rosa_chinensis	RchiOBHm_Chr6g0301031
rosa_laevigata	RLG00000011283
rosa_multiflora	Rmu_co8483439.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167240
rosa_rugosa	Rorug06G0300100
rosa_samantha	Rh6AG414000 Rh6BG421000 Rh6CG428600 Rh6DG414000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1524
AatII	GACGTC	1 cut(s)	215
Acc36I	ACCTGC	2 cut(s)	276, 737
AccB1I	GGYRCC	1 cut(s)	170
AccB7I	CCANNNNNTGG	1 cut(s)	1403
AccI	GTMKAC	1 cut(s)	63
AccII	CGCG	2 cut(s)	25, 368
AclWI	GGATC	3 cut(s)	394, 1073, 1880
AcoI	YGGCCR	1 cut(s)	1753
AcsI	RAATTY	2 cut(s)	410, 894
AcuI	CTGAAG	2 cut(s)	361, 617
AcyI	GRCGYC	4 cut(s)	94, 212, 222, 426
AdeI	CACNNNGTG	1 cut(s)	884
AfaI	GTAC	1 cut(s)	1892
AfiI	CCNNNNNNNGG	7 cut(s)	24, 140, 274, 997, 1403, 1483, 1863
AgsI	TTSAA	6 cut(s)	457, 762, 1381, 1559, 1666, 1744
AjiI	CACGTC	2 cut(s)	306, 535
AjnI	CCWGG	4 cut(s)	1147, 1187, 1622, 1722
AjuI	GAANNNNNNNTTGG	2 cut(s)	395, 427
AleI	CACNNNNGTG	1 cut(s)	830
Alw26I	GTCTC	5 cut(s)	163, 977, 1024, 1184, 1902
AlwI	GGATC	3 cut(s)	394, 1073, 1880
Ama87I	CYCGRG	1 cut(s)	260
AoxI	GGCC	5 cut(s)	925, 1394, 1653, 1753, 1854
ApeKI	GCWGC	3 cut(s)	916, 1258, 1361
ApoI	RAATTY	2 cut(s)	410, 894
ArsI	GACNNNNNNTTYG	4 cut(s)	402, 434, 545, 577
AseI	ATTAAT	1 cut(s)	1239
Asp700I	GAANNNNTTC	1 cut(s)	1785
AspLEI	GCGC	6 cut(s)	25, 368, 449, 503, 1199, 1917
AspS9I	GGNCC	4 cut(s)	241, 265, 755, 1854
AsuHPI	GGTGA	7 cut(s)	557, 598, 722, 793, 844, 1226, 1498
AsuNHI	GCTAGC	1 cut(s)	842
AvaI	CYCGRG	1 cut(s)	260
AvaII	GGWCC	3 cut(s)	241, 265, 755
BaeGI	GKGCMC	1 cut(s)	1623
BalI	TGGCCA	1 cut(s)	1755
BanI	GGYRCC	1 cut(s)	170
BanII	GRGCYC	1 cut(s)	261
BarI	GAAGNNNNNNTAC	2 cut(s)	742, 774
BauI	CACGAG	1 cut(s)	236
BbsI	GAAGAC	2 cut(s)	412, 794
BbvI	GCAGC	3 cut(s)	928, 1245, 1348
BccI	CCATC	6 cut(s)	665, 701, 814, 897, 1066, 1926
BceAI	ACGGC	4 cut(s)	235, 401, 912, 1841
BciT130I	CCWGG	4 cut(s)	1149, 1189, 1624, 1724
BciVI	GTATCC	1 cut(s)	1239
BclI	TGATCA	1 cut(s)	1125
BcoDI	GTCTC	5 cut(s)	163, 977, 1024, 1184, 1902
BfaI	CTAG	9 cut(s)	123, 185, 284, 480, 843, 993, 1250, 1286, 1734
BfoI	RGCGCY	3 cut(s)	450, 504, 1918
BfuAI	ACCTGC	2 cut(s)	276, 737
BfuI	GTATCC	1 cut(s)	1239
BisI	GCNGC	7 cut(s)	26, 85, 323, 609, 917, 1259, 1362
BlsI	GCNGC	7 cut(s)	27, 86, 324, 610, 918, 1260, 1363
Bme1390I	CCNGG	4 cut(s)	1149, 1189, 1624, 1724
Bme18I	GGWCC	3 cut(s)	241, 265, 755
BmeT110I	CYCGRG	1 cut(s)	260
BmgBI	CACGTC	2 cut(s)	306, 535
BmgT120I	GGNCC	4 cut(s)	241, 265, 755, 1854
BmiI	GGNNCC	4 cut(s)	172, 243, 434, 1839
BmrFI	CCNGG	4 cut(s)	1149, 1189, 1624, 1724
BmsI	GCATC	4 cut(s)	556, 1270, 1348, 1504
BmtI	GCTAGC	1 cut(s)	846
BpiI	GAAGAC	2 cut(s)	412, 794
BplI	GAGNNNNNCTC	4 cut(s)	132, 164, 1166, 1198
Bpu10I	CCTNAGC	1 cut(s)	1657
BpuEI	CTTGAG	3 cut(s)	83, 755, 1430
BsaHI	GRCGYC	4 cut(s)	94, 212, 222, 426
BsaI	GGTCTC	1 cut(s)	1184
BsaJI	CCNNGG	7 cut(s)	57, 261, 922, 928, 1187, 1537, 1622
BsaWI	WCCGGW	1 cut(s)	829
BsaXI	ACNNNNNCTCC	2 cut(s)	110, 140
Bsc4I	CCNNNNNNNGG	7 cut(s)	24, 140, 274, 997, 1403, 1483, 1863
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	4 cut(s)	773, 1756, 1894, 1933
Bse3DI	GCAATG	1 cut(s)	1192
BseBI	CCWGG	4 cut(s)	1149, 1189, 1624, 1724
BseDI	CCNNGG	7 cut(s)	57, 261, 922, 928, 1187, 1537, 1622
BseGI	GGATG	5 cut(s)	316, 492, 712, 1081, 1363
BseLI	CCNNNNNNNGG	7 cut(s)	24, 140, 274, 997, 1403, 1483, 1863
BseMI	GCAATG	1 cut(s)	1192
BseMII	CTCAG	4 cut(s)	498, 651, 1224, 1313
BseNI	ACTGG	4 cut(s)	773, 1756, 1894, 1933
BseRI	GAGGAG	7 cut(s)	26, 35, 118, 704, 713, 716, 728
BseSI	GKGCMC	1 cut(s)	1623
BseXI	GCAGC	3 cut(s)	928, 1245, 1348
BseYI	CCCAGC	1 cut(s)	245
Bsh1236I	CGCG	2 cut(s)	25, 368
BshFI	GGCC	5 cut(s)	927, 1396, 1655, 1755, 1856
BshNI	GGYRCC	1 cut(s)	170
BsiHKCI	CYCGRG	1 cut(s)	260
BsiSI	CCGG	2 cut(s)	168, 830
BslFI	GGGAC	1 cut(s)	811
BslI	CCNNNNNNNGG	7 cut(s)	24, 140, 274, 997, 1403, 1483, 1863
BsmAI	GTCTC	5 cut(s)	163, 977, 1024, 1184, 1902
BsmBI	CGTCTC	1 cut(s)	163
BsmFI	GGGAC	1 cut(s)	811
BsnI	GGCC	5 cut(s)	927, 1396, 1655, 1755, 1856
Bso31I	GGTCTC	1 cut(s)	1184
BsoBI	CYCGRG	1 cut(s)	260
Bsp1286I	GDGCHC	2 cut(s)	261, 1623
Bsp143I	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
BspANI	GGCC	5 cut(s)	927, 1396, 1655, 1755, 1856
BspCNI	CTCAG	4 cut(s)	499, 652, 1225, 1312
BspFNI	CGCG	2 cut(s)	25, 368
BspLI	GGNNCC	4 cut(s)	172, 243, 434, 1839
BspMI	ACCTGC	2 cut(s)	276, 737
BspOI	GCTAGC	1 cut(s)	846
BspPI	GGATC	3 cut(s)	394, 1073, 1880
BspQI	GCTCTTC	1 cut(s)	155
BspT107I	GGYRCC	1 cut(s)	170
BspTNI	GGTCTC	1 cut(s)	1184
BsrDI	GCAATG	1 cut(s)	1192
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	4 cut(s)	773, 1756, 1894, 1933
BssAI	RCCGGY	1 cut(s)	167
BssECI	CCNNGG	7 cut(s)	57, 261, 922, 928, 1187, 1537, 1622
BssMI	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
BssNI	GRCGYC	4 cut(s)	94, 212, 222, 426
BssSI	CACGAG	1 cut(s)	236
BssT1I	CCWWGG	1 cut(s)	1537
Bst2BI	CACGAG	1 cut(s)	236
Bst2UI	CCWGG	4 cut(s)	1149, 1189, 1624, 1724
Bst4CI	ACNGT	6 cut(s)	61, 542, 802, 1468, 1580, 1823
Bst6I	CTCTTC	1 cut(s)	155
BstACI	GRCGYC	4 cut(s)	94, 212, 222, 426
BstC8I	GCNNGC	5 cut(s)	146, 197, 357, 844, 1629
BstDEI	CTNAG	5 cut(s)	507, 660, 1233, 1299, 1657
BstDSI	CCRYGG	2 cut(s)	57, 928
BstENI	CCTNNNNNAGG	2 cut(s)	138, 272
BstF5I	GGATG	5 cut(s)	316, 492, 712, 1081, 1363
BstFNI	CGCG	2 cut(s)	25, 368
BstH2I	RGCGCY	3 cut(s)	450, 504, 1918
BstHHI	GCGC	6 cut(s)	25, 368, 449, 503, 1199, 1917
BstKTI	GATC	8 cut(s)	294, 389, 1081, 1128, 1317, 1749, 1795, 1888
BstMAI	GTCTC	5 cut(s)	163, 977, 1024, 1184, 1902
BstMBI	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
BstMWI	GCNNNNNNNGC	6 cut(s)	93, 365, 432, 446, 500, 1267
BstNI	CCWGG	4 cut(s)	1149, 1189, 1624, 1724
BstNSI	RCATGY	4 cut(s)	1005, 1631, 1695, 1703
BstSCI	CCNGG	4 cut(s)	1147, 1187, 1622, 1722
BstSLI	GKGCMC	1 cut(s)	1623
BstUI	CGCG	2 cut(s)	25, 368
BstV1I	GCAGC	3 cut(s)	928, 1245, 1348
BstV2I	GAAGAC	2 cut(s)	412, 794
BsuI	GTATCC	1 cut(s)	1239
BsuRI	GGCC	5 cut(s)	927, 1396, 1655, 1755, 1856
BtgI	CCRYGG	2 cut(s)	57, 928
BtgZI	GCGATG	1 cut(s)	660
BtrI	CACGTC	2 cut(s)	306, 535
BtsCI	GGATG	5 cut(s)	316, 492, 712, 1081, 1363
BtsI	GCAGTG	1 cut(s)	1070
BtsIMutI	CAGTG	4 cut(s)	780, 807, 1070, 1763
BveI	ACCTGC	2 cut(s)	276, 737
Cac8I	GCNNGC	5 cut(s)	146, 197, 357, 844, 1629
CfoI	GCGC	6 cut(s)	25, 368, 449, 503, 1199, 1917
Cfr10I	RCCGGY	1 cut(s)	167
Cfr13I	GGNCC	4 cut(s)	241, 265, 755, 1854
CseI	GACGC	3 cut(s)	102, 211, 415
Csp6I	GTAC	1 cut(s)	1891
CspCI	CAANNNNNGTGG	2 cut(s)	1694, 1729
CviAII	CATG	9 cut(s)	979, 1002, 1225, 1628, 1692, 1700, 1767, 1834, 1851
CviQI	GTAC	1 cut(s)	1891
DdeI	CTNAG	5 cut(s)	507, 660, 1233, 1299, 1657
DpnI	GATC	8 cut(s)	293, 388, 1080, 1127, 1316, 1748, 1794, 1887
DpnII	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
DraIII	CACNNNGTG	1 cut(s)	884
EaeI	YGGCCR	1 cut(s)	1753
Eam1104I	CTCTTC	1 cut(s)	155
EarI	CTCTTC	1 cut(s)	155
EciI	GGCGGA	3 cut(s)	40, 626, 1285
Eco130I	CCWWGG	1 cut(s)	1537
Eco147I	AGGCCT	1 cut(s)	1655
Eco24I	GRGCYC	1 cut(s)	261
Eco31I	GGTCTC	1 cut(s)	1184
Eco47I	GGWCC	3 cut(s)	241, 265, 755
Eco57I	CTGAAG	2 cut(s)	361, 617
Eco88I	CYCGRG	1 cut(s)	260
EcoNI	CCTNNNNNAGG	2 cut(s)	138, 272
EcoO109I	RGGNCCY	2 cut(s)	265, 755
EcoRII	CCWGG	4 cut(s)	1147, 1187, 1622, 1722
EcoT14I	CCWWGG	1 cut(s)	1537
EcoT38I	GRGCYC	1 cut(s)	261
ErhI	CCWWGG	1 cut(s)	1537
Esp3I	CGTCTC	1 cut(s)	163
FaeI	CATG	9 cut(s)	982, 1005, 1228, 1631, 1695, 1703, 1770, 1837, 1854
FalI	AAGNNNNNCTT	2 cut(s)	137, 169
FaqI	GGGAC	1 cut(s)	811
FatI	CATG	9 cut(s)	978, 1001, 1224, 1627, 1691, 1699, 1766, 1833, 1850
FauI	CCCGC	2 cut(s)	89, 614
FbaI	TGATCA	1 cut(s)	1125
FblI	GTMKAC	1 cut(s)	63
Fnu4HI	GCNGC	7 cut(s)	26, 85, 323, 609, 917, 1259, 1362
FokI	GGATG	5 cut(s)	323, 499, 719, 1088, 1370
FriOI	GRGCYC	1 cut(s)	261
Fsp4HI	GCNGC	7 cut(s)	26, 85, 323, 609, 917, 1259, 1362
FspBI	CTAG	9 cut(s)	123, 185, 284, 480, 843, 993, 1250, 1286, 1734
GlaI	GCGC	6 cut(s)	24, 367, 448, 502, 1198, 1916
GluI	GCNGC	7 cut(s)	26, 85, 323, 609, 917, 1259, 1362
GsaI	CCCAGC	1 cut(s)	249
HaeII	RGCGCY	3 cut(s)	450, 504, 1918
HaeIII	GGCC	5 cut(s)	927, 1396, 1655, 1755, 1856
HapII	CCGG	2 cut(s)	168, 830
HgaI	GACGC	3 cut(s)	102, 211, 415
HhaI	GCGC	6 cut(s)	25, 368, 449, 503, 1199, 1917
Hin1I	GRCGYC	4 cut(s)	94, 212, 222, 426
Hin1II	CATG	9 cut(s)	982, 1005, 1228, 1631, 1695, 1703, 1770, 1837, 1854
Hin6I	GCGC	6 cut(s)	23, 366, 447, 501, 1197, 1915
HinP1I	GCGC	6 cut(s)	23, 366, 447, 501, 1197, 1915
HincII	GTYRAC	3 cut(s)	730, 1096, 1605
HindII	GTYRAC	3 cut(s)	730, 1096, 1605
HinfI	GANTC	6 cut(s)	339, 716, 769, 835, 1422, 1430
HpaI	GTTAAC	1 cut(s)	1096
HpaII	CCGG	2 cut(s)	168, 830
HphI	GGTGA	7 cut(s)	557, 598, 722, 793, 844, 1226, 1498
Hpy188III	TCNNGA	9 cut(s)	430, 762, 1232, 1307, 1547, 1744, 1790, 1806, 1899
Hpy99I	CGWCG	7 cut(s)	96, 195, 217, 227, 299, 307, 431
HpyCH4III	ACNGT	6 cut(s)	61, 542, 802, 1468, 1580, 1823
HpyCH4IV	ACGT	5 cut(s)	212, 305, 452, 534, 1586
HpyCH4V	TGCA	5 cut(s)	408, 746, 978, 1261, 1691
HpyF10VI	GCNNNNNNNGC	6 cut(s)	93, 365, 432, 446, 500, 1267
HpyF3I	CTNAG	5 cut(s)	507, 660, 1233, 1299, 1657
HpySE526I	ACGT	5 cut(s)	212, 305, 452, 534, 1586
Hsp92I	GRCGYC	4 cut(s)	94, 212, 222, 426
Hsp92II	CATG	9 cut(s)	982, 1005, 1228, 1631, 1695, 1703, 1770, 1837, 1854
HspAI	GCGC	6 cut(s)	23, 366, 447, 501, 1197, 1915
Ksp22I	TGATCA	1 cut(s)	1125
KspAI	GTTAAC	1 cut(s)	1096
Kzo9I	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
LguI	GCTCTTC	1 cut(s)	155
LmnI	GCTCC	6 cut(s)	131, 432, 924, 1162, 1417, 1843
Lsp1109I	GCAGC	3 cut(s)	928, 1245, 1348
LweI	GCATC	4 cut(s)	556, 1270, 1348, 1504
MaeI	CTAG	9 cut(s)	123, 185, 284, 480, 843, 993, 1250, 1286, 1734
MaeII	ACGT	5 cut(s)	212, 305, 452, 534, 1586
MaeIII	GTNAC	8 cut(s)	530, 781, 823, 968, 1153, 1288, 1570, 1670
MalI	GATC	8 cut(s)	293, 388, 1080, 1127, 1316, 1748, 1794, 1887
MboI	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
MboII	GAAGA	7 cut(s)	142, 145, 334, 412, 799, 1081, 1517
MfeI	CAATTG	3 cut(s)	349, 403, 1386
MhlI	GDGCHC	2 cut(s)	261, 1623
MlsI	TGGCCA	1 cut(s)	1755
MluCI	AATT	7 cut(s)	349, 403, 410, 894, 1089, 1240, 1386
MluNI	TGGCCA	1 cut(s)	1755
MlyI	GAGTC	1 cut(s)	725
MmeI	TCCRAC	4 cut(s)	115, 1007, 1030, 1865
Mox20I	TGGCCA	1 cut(s)	1755
MroXI	GAANNNNTTC	1 cut(s)	1785
MscI	TGGCCA	1 cut(s)	1755
MseI	TTAA	5 cut(s)	848, 1095, 1169, 1239, 1638
MslI	CAYNNNNRTG	5 cut(s)	830, 885, 1121, 1632, 1849
Msp20I	TGGCCA	1 cut(s)	1755
MspI	CCGG	2 cut(s)	168, 830
MspR9I	CCNGG	4 cut(s)	1149, 1189, 1624, 1724
MunI	CAATTG	3 cut(s)	349, 403, 1386
MvaI	CCWGG	4 cut(s)	1149, 1189, 1624, 1724
MvnI	CGCG	2 cut(s)	25, 368
MwoI	GCNNNNNNNGC	6 cut(s)	93, 365, 432, 446, 500, 1267
NdeII	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
NheI	GCTAGC	1 cut(s)	842
NlaIII	CATG	9 cut(s)	982, 1005, 1228, 1631, 1695, 1703, 1770, 1837, 1854
NlaIV	GGNNCC	4 cut(s)	172, 243, 434, 1839
NmeAIII	GCCGAG	2 cut(s)	385, 461
NmuCI	GTSAC	5 cut(s)	530, 781, 823, 968, 1288
NspI	RCATGY	4 cut(s)	1005, 1631, 1695, 1703
OliI	CACNNNNGTG	1 cut(s)	830
PaeI	GCATGC	1 cut(s)	1631
PceI	AGGCCT	1 cut(s)	1655
PciSI	GCTCTTC	1 cut(s)	155
PcsI	WCGNNNNNNNCGW	1 cut(s)	693
PdmI	GAANNNNTTC	1 cut(s)	1785
PfeI	GAWTC	5 cut(s)	339, 769, 835, 1422, 1430
PflFI	GACNNNGTC	1 cut(s)	910
PflMI	CCANNNNNTGG	1 cut(s)	1403
PkrI	GCNGC	7 cut(s)	27, 86, 324, 610, 918, 1260, 1363
PleI	GAGTC	1 cut(s)	724
PpsI	GAGTC	1 cut(s)	724
PpuMI	RGGWCCY	2 cut(s)	265, 755
PshBI	ATTAAT	1 cut(s)	1239
PsiI	TTATAA	1 cut(s)	1524
Psp5II	RGGWCCY	2 cut(s)	265, 755
Psp6I	CCWGG	4 cut(s)	1147, 1187, 1622, 1722
PspFI	CCCAGC	1 cut(s)	245
PspGI	CCWGG	4 cut(s)	1147, 1187, 1622, 1722
PspN4I	GGNNCC	4 cut(s)	172, 243, 434, 1839
PspPI	GGNCC	4 cut(s)	241, 265, 755, 1854
PspPPI	RGGWCCY	2 cut(s)	265, 755
PsrI	GAACNNNNNNTAC	2 cut(s)	1576, 1608
PsyI	GACNNNGTC	1 cut(s)	910
RsaI	GTAC	1 cut(s)	1892
RsaNI	GTAC	1 cut(s)	1891
RseI	CAYNNNNRTG	5 cut(s)	830, 885, 1121, 1632, 1849
SapI	GCTCTTC	1 cut(s)	155
SaqAI	TTAA	5 cut(s)	848, 1095, 1169, 1239, 1638
SatI	GCNGC	7 cut(s)	26, 85, 323, 609, 917, 1259, 1362
Sau3AI	GATC	8 cut(s)	291, 386, 1078, 1125, 1314, 1746, 1792, 1885
Sau96I	GGNCC	4 cut(s)	241, 265, 755, 1854
SchI	GAGTC	1 cut(s)	725
ScrFI	CCNGG	4 cut(s)	1149, 1189, 1624, 1724
SduI	GDGCHC	2 cut(s)	261, 1623
SfaNI	GCATC	4 cut(s)	556, 1270, 1348, 1504
SinI	GGWCC	3 cut(s)	241, 265, 755
SmiMI	CAYNNNNRTG	5 cut(s)	830, 885, 1121, 1632, 1849
SmlI	CTYRAG	3 cut(s)	98, 734, 1445
SmoI	CTYRAG	3 cut(s)	98, 734, 1445
SphI	GCATGC	1 cut(s)	1631
Sse9I	AATT	7 cut(s)	349, 403, 410, 894, 1089, 1240, 1386
SseBI	AGGCCT	1 cut(s)	1655
SspMI	CTAG	9 cut(s)	123, 185, 284, 480, 843, 993, 1250, 1286, 1734
StuI	AGGCCT	1 cut(s)	1655
StyD4I	CCNGG	4 cut(s)	1147, 1187, 1622, 1722
StyI	CCWWGG	1 cut(s)	1537
TaaI	ACNGT	6 cut(s)	61, 542, 802, 1468, 1580, 1823
TaiI	ACGT	5 cut(s)	215, 308, 455, 537, 1589
TaqI	TCGA	6 cut(s)	201, 215, 231, 302, 1264, 1900
TasI	AATT	7 cut(s)	349, 403, 410, 894, 1089, 1240, 1386
TauI	GCSGC	4 cut(s)	28, 87, 325, 611
TfiI	GAWTC	5 cut(s)	339, 769, 835, 1422, 1430
Tru1I	TTAA	5 cut(s)	848, 1095, 1169, 1239, 1638
Tru9I	TTAA	5 cut(s)	848, 1095, 1169, 1239, 1638
TscAI	CASTG	4 cut(s)	780, 807, 1070, 1763
TseFI	GTSAC	5 cut(s)	530, 781, 823, 968, 1288
TseI	GCWGC	3 cut(s)	916, 1258, 1361
Tsp45I	GTSAC	5 cut(s)	530, 781, 823, 968, 1288
TspDTI	ATGAA	6 cut(s)	663, 1151, 1414, 1794, 1839, 1887
TspGWI	ACGGA	2 cut(s)	1071, 1878
TspRI	CASTG	4 cut(s)	780, 807, 1070, 1763
Tth111I	GACNNNGTC	1 cut(s)	910
Van91I	CCANNNNNTGG	1 cut(s)	1403
VpaK11BI	GGWCC	3 cut(s)	241, 265, 755
VspI	ATTAAT	1 cut(s)	1239
XagI	CCTNNNNNAGG	2 cut(s)	138, 272
XapI	RAATTY	2 cut(s)	410, 894
XceI	RCATGY	4 cut(s)	1005, 1631, 1695, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1848
XmiI	GTMKAC	1 cut(s)	63
XmnI	GAANNNNTTC	1 cut(s)	1785
XspI	CTAG	9 cut(s)	123, 185, 284, 480, 843, 993, 1250, 1286, 1734
ZraI	GACGTC	1 cut(s)	213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.