Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0013169

Physical Location & Seq

Genomic Coordinates Forward (+)

8452611 .. 8456558

Gene Structure 3948 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00167240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGTCCACATCCTCAGCCCGAGCACGGCTGGCTCTCATAGCCCTCCTCTCCGCCACCACGTTCTACTGTTTCTACAAATCTCGCCGCCTCAAGCAACTCTCCCTAAACCCTAACCCTAGCACCTCTCCGCCTCGCAAAGGCAAGCTCTTCTTCATTTCCCAAACCGGAACCTCCAAAGCCCTAGCTCAGCGTCTTCTCGAACTTCTAGCCTCCAATGGCCTCGCCTTCGAGCTCGTCGACCCTAGCAGCTACGAGCCAGAGGACCTCCCCAAGGAAACCCTAGTTCTGATCGTCGCTTCCACCTGGGACGATGGACAACCGCCTTCGAGCGCCAAGTTCTTCACCAATTGGCTCGCGGAGAGCGCCGAGGACTTTAGAGTGGGGTCCATGCTGCTCTCGCAGTGCAGATTCTCGGTGTTCGGCGTCGGAAGCCGAGCCTACGGCGCGTCGTTCAATGCGGTGGGGAGGGACTTGTCGAAGTGGATGAGGGCGTTGGGCGCCGCCGAGATATTGCCGGTTTGGGAAGGTGACGTGGACGACGGGGATATGGACCAGGTCTTTGAGGCTTGGAGTGGTAAGCTGATGAGGTTTTTGAAGGGCGGTGTGGCCGAAAACGGTGTCGCTTTGGGTAATGGTGTTGGTGTTGGTGCTGAAGGTGAAGCTGAGTATTCTGACGTGTCAGATTATGATGAGGAGGAGGAGGAGGAGACTGTGGTTGAGTCTGGGGTTGTTGATCTTGAGGACATTGCAGGTAAAGCACCTTCAAGGGGGACGGGGACGGTGACGGTGACGGTGGCTGAGACTAAGACCAATGGGATAGTGAATGGTAAAAGAGATATGGTCACTCCGGTGATTCGTGCCAGCTTAGAGAAGCAGGGGTACAAAATTATTGGTTCGCATAGTGGTGTCAAAATTTGTAGATGGACAAAGTCACAGCTTAGAGGCCGAGGTGGTTGCTATAAACACTCGTTTTATGGCATAGAAAGTCATAGGTGCATGGAGGCAACCCCTAGTTTGGCATGTGCCAATAAATGTGTTTTCTGTTGGAGACATCATACAAACCCTGTTGGAAAGAGTTGGCAGTGGAAGATGGACGATCCATTAGAGATTGTGAATACTGCCATAGACCTGCACAGTAAAATGATTAAGCAAATGAAAGGAGTTCCTGGAGTTACATTGGAGCGATTAACGGAGGGTCTCTCTCCCAGGCATTGTGCCTTGTCACTTGTTGGTGAACCTATTATGTATCCAGAGATTAATACACTAGTAGATGAGCTGCATCGTAGACGGATTTCTACTTTTCTAGTGACAAATGCTCAATTTCCTGAAAAAATTAGAATGCTGAAACCGATTACACAGTTATATGTAAGTGTGGATGCTGCAACTAAAGAGAGTTTGAAGGCAATTGACAGGCCACTTTTTGGAGATTTTTGGGAGCGATTTATTGATTCCTTGAAAGCTCTCAAGGAAAAACAGCAGCGAACTGTTTATCGCTTAACTTTGGTCAAGGGATGGAATACAGAAGAAATTGAGGCTTATTATAACATCTTTAGCATTGGTAACCCCGATTTTGTTGAAATCAAAGGAGTTACATATTGTGGATCGTCTGCTACCTCAAAGTTGACGATGGAGAATGTGCCCTGGCATGCTGATGTTAAAGCTTTTTCAGAGGCCTTGGCTTTGAGAAGTAACGGCGAGTATGAGGTCGCATGTGAGCATGTCCACTCATGTTGTGTCCTCCTGGCAAAAACTAAAAAGTTCAAGATCAATGGGCAGTGGTTCACATGGATAGACTATGAAAAGTTTCATGATCTGGTGGCTTCTGGAAAACCCTTTGACAGTAATGATTATATGGCTGCCACACCTTCATGGGCTGTTTATGGGGCAGTTGAAGGTGGATTTGATCCCTATCAATCTCGATATAGGAAGGAGCGACATCACAGATCAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Flavodoxin_1 Radical_SAM Wyosine_form

Protein Analysis

651

Amino Acids

72.54

Weight (kDa)

6.57

Isoelectric Point (pI)

34.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	49 - 190	3.3e-27	Flavodoxin
Radical_SAM	PF04055	339 - 514	1.9e-16	Radical SAM superfamily
Wyosine_form	PF08608	520 - 583	9.4e-24	Wyosine base formation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75200
fragaria_vesca	FvH4_2g39810 FvH4_2g39810
malus_domestica	MD08G1031900.v1.1 MD15G1027800.v1.1
prunus_persica	Prupe.1G379500_v2.0.a1 Prupe.1G379500_v2.0.a1
pyrus_communis	pycom08g02520 pycom15g02380
rosa_chinensis	RchiOBHm_Chr6g0301031
rosa_laevigata	RLG00000011283
rosa_multiflora	Rmu_co8483439.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167240
rosa_rugosa	Rorug06G0300100
rosa_samantha	Rh6AG414000 Rh6BG421000 Rh6CG428600 Rh6DG414000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1542
Acc36I	ACCTGC	2 cut(s)	740, 1137
AccB1I	GGYRCC	1 cut(s)	497
AccB7I	CCANNNNNTGG	1 cut(s)	1421
AccI	GTMKAC	2 cut(s)	237, 1285
AccII	CGCG	2 cut(s)	356, 446
AciI	CCGC	8 cut(s)	51, 85, 128, 320, 356, 458, 501, 600
AclWI	GGATC	3 cut(s)	1091, 1609, 1898
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	1 cut(s)	912
AcuI	CTGAAG	1 cut(s)	672
AcyI	GRCGYC	2 cut(s)	423, 498
AfaI	GTAC	1 cut(s)	881
AfiI	CCNNNNNNNGG	6 cut(s)	24, 137, 271, 767, 1015, 1421
AflIII	ACRYGT	1 cut(s)	675
AgsI	TTSAA	8 cut(s)	454, 595, 765, 1399, 1456, 1577, 1762, 1892
AhlI	ACTAGT	1 cut(s)	1264
AjiI	CACGTC	2 cut(s)	532, 676
AjnI	CCWGG	6 cut(s)	302, 552, 1165, 1205, 1640, 1740
AleI	CACNNNNGTG	1 cut(s)	848
Alw21I	GWGCWC	2 cut(s)	25, 234
Alw26I	GTCTC	4 cut(s)	701, 794, 1042, 1202
AlwI	GGATC	3 cut(s)	1091, 1609, 1898
Ama87I	CYCGRG	1 cut(s)	18
AoxI	GGCC	5 cut(s)	217, 606, 943, 1412, 1671
ApeKI	GCWGC	6 cut(s)	246, 391, 1276, 1379, 1477, 1856
ApoI	RAATTY	1 cut(s)	912
ArsI	GACNNNNNNTTYG	4 cut(s)	542, 574, 603, 635
AseI	ATTAAT	1 cut(s)	1257
Asp700I	GAANNNNTTC	1 cut(s)	1803
AspLEI	GCGC	4 cut(s)	332, 365, 446, 500
AspS9I	GGNCC	3 cut(s)	262, 384, 550
AsuHPI	GGTGA	7 cut(s)	334, 539, 668, 793, 799, 862, 1244
AvaI	CYCGRG	1 cut(s)	18
AvaII	GGWCC	3 cut(s)	262, 384, 550
BaeGI	GKGCMC	1 cut(s)	1641
BanI	GGYRCC	1 cut(s)	497
BanII	GRGCYC	1 cut(s)	234
BarI	GAAGNNNNNNTAC	4 cut(s)	745, 777, 863, 895
BbsI	GAAGAC	1 cut(s)	185
Bbv12I	GWGCWC	2 cut(s)	25, 234
BbvCI	CCTCAGC	1 cut(s)	13
BbvI	GCAGC	6 cut(s)	258, 378, 1263, 1366, 1489, 1843
BccI	CCATC	5 cut(s)	305, 915, 1084, 1506, 1621
BceAI	ACGGC	3 cut(s)	41, 457, 1708
BcgI	CGANNNNNNTGC	2 cut(s)	936, 970
BciT130I	CCWGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
BciVI	GTATCC	1 cut(s)	1257
BcoDI	GTCTC	4 cut(s)	701, 794, 1042, 1202
BcuI	ACTAGT	1 cut(s)	1264
BfaI	CTAG	8 cut(s)	117, 182, 206, 243, 281, 1011, 1265, 1304
BfoI	RGCGCY	3 cut(s)	333, 366, 501
BfuAI	ACCTGC	2 cut(s)	740, 1137
BfuI	GTATCC	1 cut(s)	1257
BisI	GCNGC	8 cut(s)	85, 247, 392, 501, 1277, 1380, 1478, 1857
BlpI	GCTNAGC	1 cut(s)	186
BlsI	GCNGC	8 cut(s)	86, 248, 393, 502, 1278, 1381, 1479, 1858
Bme1390I	CCNGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
Bme18I	GGWCC	3 cut(s)	262, 384, 550
BmeT110I	CYCGRG	1 cut(s)	18
BmgBI	CACGTC	2 cut(s)	532, 676
BmgT120I	GGNCC	3 cut(s)	262, 384, 550
BmiI	GGNNCC	3 cut(s)	169, 385, 499
BmrFI	CCNGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
BmsI	GCATC	2 cut(s)	1288, 1366
BpiI	GAAGAC	1 cut(s)	185
BplI	GAGNNNNNCTC	2 cut(s)	1184, 1216
BpmI	CTGGAG	1 cut(s)	1188
Bpu10I	CCTNAGC	1 cut(s)	13
Bpu1102I	GCTNAGC	1 cut(s)	186
BpuEI	CTTGAG	3 cut(s)	74, 758, 1448
BsaBI	GATNNNNATC	1 cut(s)	1908
BsaHI	GRCGYC	2 cut(s)	423, 498
BsaI	GGTCTC	1 cut(s)	1202
BsaJI	CCNNGG	7 cut(s)	270, 303, 366, 946, 1205, 1640, 1674
BsaWI	WCCGGW	2 cut(s)	164, 847
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 137, 271, 767, 1015, 1421
Bse118I	RCCGGY	1 cut(s)	514
Bse1I	ACTGG	1 cut(s)	1951
Bse3DI	GCAATG	1 cut(s)	744
Bse8I	GATNNNNATC	1 cut(s)	1908
BseBI	CCWGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
BseDI	CCNNGG	7 cut(s)	270, 303, 366, 946, 1205, 1640, 1674
BseGI	GGATG	4 cut(s)	8, 489, 1381, 1517
BseJI	GATNNNNATC	1 cut(s)	1908
BseLI	CCNNNNNNNGG	6 cut(s)	24, 137, 271, 767, 1015, 1421
BseMI	GCAATG	1 cut(s)	744
BseMII	CTCAG	4 cut(s)	27, 200, 654, 789
BseNI	ACTGG	1 cut(s)	1951
BseRI	GAGGAG	6 cut(s)	35, 707, 710, 713, 716, 719
BseSI	GKGCMC	1 cut(s)	1641
BseXI	GCAGC	6 cut(s)	258, 378, 1263, 1366, 1489, 1843
BsgI	GTGCAG	2 cut(s)	424, 1115
Bsh1236I	CGCG	2 cut(s)	356, 446
BshFI	GGCC	5 cut(s)	219, 608, 945, 1414, 1673
BshNI	GGYRCC	1 cut(s)	497
BsiHKAI	GWGCWC	2 cut(s)	25, 234
BsiHKCI	CYCGRG	1 cut(s)	18
BsiSI	CCGG	3 cut(s)	165, 515, 848
BslFI	GGGAC	4 cut(s)	320, 482, 784, 790
BslI	CCNNNNNNNGG	6 cut(s)	24, 137, 271, 767, 1015, 1421
BsmAI	GTCTC	4 cut(s)	701, 794, 1042, 1202
BsmFI	GGGAC	4 cut(s)	320, 482, 784, 790
BsmI	GAATGC	1 cut(s)	1344
BsnI	GGCC	5 cut(s)	219, 608, 945, 1414, 1673
Bso31I	GGTCTC	1 cut(s)	1202
BsoBI	CYCGRG	1 cut(s)	18
Bsp1286I	GDGCHC	3 cut(s)	25, 234, 1641
Bsp143I	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
Bsp1720I	GCTNAGC	1 cut(s)	186
BspACI	CCGC	8 cut(s)	51, 85, 128, 320, 356, 458, 501, 600
BspANI	GGCC	5 cut(s)	219, 608, 945, 1414, 1673
BspCNI	CTCAG	4 cut(s)	26, 199, 655, 790
BspFNI	CGCG	2 cut(s)	356, 446
BspHI	TCATGA	1 cut(s)	1807
BspLI	GGNNCC	3 cut(s)	169, 385, 499
BspMI	ACCTGC	2 cut(s)	740, 1137
BspPI	GGATC	3 cut(s)	1091, 1609, 1898
BspQI	GCTCTTC	1 cut(s)	152
BspT107I	GGYRCC	1 cut(s)	497
BspTNI	GGTCTC	1 cut(s)	1202
BsrDI	GCAATG	1 cut(s)	744
BsrFI	RCCGGY	1 cut(s)	514
BsrI	ACTGG	1 cut(s)	1951
BssAI	RCCGGY	1 cut(s)	514
BssECI	CCNNGG	7 cut(s)	270, 303, 366, 946, 1205, 1640, 1674
BssMI	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
BssNI	GRCGYC	2 cut(s)	423, 498
BssT1I	CCWWGG	2 cut(s)	270, 1674
Bst2UI	CCWGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
Bst6I	CTCTTC	1 cut(s)	152
BstACI	GRCGYC	2 cut(s)	423, 498
BstC8I	GCNNGC	5 cut(s)	30, 143, 354, 862, 1647
BstDEI	CTNAG	7 cut(s)	13, 186, 663, 798, 804, 865, 938
BstEII	GGTNACC	1 cut(s)	1559
BstENI	CCTNNNNNAGG	2 cut(s)	135, 269
BstF5I	GGATG	4 cut(s)	8, 489, 1381, 1517
BstFNI	CGCG	2 cut(s)	356, 446
BstH2I	RGCGCY	3 cut(s)	333, 366, 501
BstHHI	GCGC	4 cut(s)	332, 365, 446, 500
BstKTI	GATC	8 cut(s)	291, 736, 1099, 1604, 1767, 1813, 1906, 1946
BstMAI	GTCTC	4 cut(s)	701, 794, 1042, 1202
BstMBI	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
BstMWI	GCNNNNNNNGC	8 cut(s)	29, 38, 362, 397, 429, 443, 497, 755
BstNI	CCWGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
BstNSI	RCATGY	4 cut(s)	1023, 1649, 1713, 1721
BstPI	GGTNACC	1 cut(s)	1559
BstSCI	CCNGG	6 cut(s)	302, 552, 1165, 1205, 1640, 1740
BstSLI	GKGCMC	1 cut(s)	1641
BstUI	CGCG	2 cut(s)	356, 446
BstV1I	GCAGC	6 cut(s)	258, 378, 1263, 1366, 1489, 1843
BstV2I	GAAGAC	1 cut(s)	185
BsuI	GTATCC	1 cut(s)	1257
BsuRI	GGCC	5 cut(s)	219, 608, 945, 1414, 1673
BtrI	CACGTC	2 cut(s)	532, 676
BtsCI	GGATG	4 cut(s)	8, 489, 1381, 1517
BtsI	GCAGTG	3 cut(s)	407, 1088, 1781
BtsIMutI	CAGTG	3 cut(s)	407, 1088, 1781
BveI	ACCTGC	2 cut(s)	740, 1137
Cac8I	GCNNGC	5 cut(s)	30, 143, 354, 862, 1647
CciI	TCATGA	1 cut(s)	1807
CfoI	GCGC	4 cut(s)	332, 365, 446, 500
Cfr10I	RCCGGY	1 cut(s)	514
Cfr13I	GGNCC	3 cut(s)	262, 384, 550
CseI	GACGC	3 cut(s)	179, 412, 435
CsiI	ACCWGGT	1 cut(s)	552
Csp6I	GTAC	1 cut(s)	880
CspCI	CAANNNNNGTGG	2 cut(s)	1712, 1747
CviQI	GTAC	1 cut(s)	880
DdeI	CTNAG	7 cut(s)	13, 186, 663, 798, 804, 865, 938
DinI	GGCGCC	1 cut(s)	499
DpnI	GATC	8 cut(s)	290, 735, 1098, 1603, 1766, 1812, 1905, 1945
DpnII	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	1 cut(s)	152
EarI	CTCTTC	1 cut(s)	152
EciI	GGCGGA	2 cut(s)	40, 117
Ecl136II	GAGCTC	1 cut(s)	232
Eco130I	CCWWGG	2 cut(s)	270, 1674
Eco147I	AGGCCT	1 cut(s)	1673
Eco24I	GRGCYC	1 cut(s)	234
Eco31I	GGTCTC	1 cut(s)	1202
Eco47I	GGWCC	3 cut(s)	262, 384, 550
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	1 cut(s)	672
Eco88I	CYCGRG	1 cut(s)	18
Eco91I	GGTNACC	1 cut(s)	1559
EcoICRI	GAGCTC	1 cut(s)	232
EcoNI	CCTNNNNNAGG	2 cut(s)	135, 269
EcoO109I	RGGNCCY	1 cut(s)	262
EcoO65I	GGTNACC	1 cut(s)	1559
EcoRII	CCWGG	6 cut(s)	302, 552, 1165, 1205, 1640, 1740
EcoT14I	CCWWGG	2 cut(s)	270, 1674
EcoT38I	GRGCYC	1 cut(s)	234
EgeI	GGCGCC	1 cut(s)	499
EheI	GGCGCC	1 cut(s)	499
ErhI	CCWWGG	2 cut(s)	270, 1674
FalI	AAGNNNNNCTT	2 cut(s)	134, 166
FaqI	GGGAC	4 cut(s)	320, 482, 784, 790
FblI	GTMKAC	2 cut(s)	237, 1285
Fnu4HI	GCNGC	8 cut(s)	85, 247, 392, 501, 1277, 1380, 1478, 1857
FokI	GGATG	3 cut(s)	496, 1388, 1524
FriOI	GRGCYC	1 cut(s)	234
Fsp4HI	GCNGC	8 cut(s)	85, 247, 392, 501, 1277, 1380, 1478, 1857
FspBI	CTAG	8 cut(s)	117, 182, 206, 243, 281, 1011, 1265, 1304
GlaI	GCGC	4 cut(s)	331, 364, 445, 499
GluI	GCNGC	8 cut(s)	85, 247, 392, 501, 1277, 1380, 1478, 1857
GsuI	CTGGAG	1 cut(s)	1188
HaeII	RGCGCY	3 cut(s)	333, 366, 501
HaeIII	GGCC	5 cut(s)	219, 608, 945, 1414, 1673
HapII	CCGG	3 cut(s)	165, 515, 848
HgaI	GACGC	3 cut(s)	179, 412, 435
HhaI	GCGC	4 cut(s)	332, 365, 446, 500
Hin1I	GRCGYC	2 cut(s)	423, 498
Hin6I	GCGC	4 cut(s)	330, 363, 444, 498
HinP1I	GCGC	4 cut(s)	330, 363, 444, 498
HincII	GTYRAC	2 cut(s)	238, 1623
HindII	GTYRAC	2 cut(s)	238, 1623
HindIII	AAGCTT	1 cut(s)	1659
HinfI	GANTC	4 cut(s)	408, 719, 853, 1448
HpaII	CCGG	3 cut(s)	165, 515, 848
HphI	GGTGA	7 cut(s)	334, 539, 668, 793, 799, 862, 1244
Hpy166II	GTNNAC	8 cut(s)	6, 238, 535, 1235, 1286, 1623, 1723, 1782
Hpy188I	TCNGA	5 cut(s)	288, 428, 673, 682, 1669
Hpy188III	TCNNGA	8 cut(s)	197, 737, 1250, 1325, 1762, 1808, 1824, 1917
Hpy8I	GTNNAC	8 cut(s)	6, 238, 535, 1235, 1286, 1623, 1723, 1782
Hpy99I	CGWCG	5 cut(s)	239, 296, 428, 451, 542
HpyCH4IV	ACGT	3 cut(s)	59, 531, 675
HpyCH4V	TGCA	6 cut(s)	405, 749, 996, 1132, 1279, 1382
HpyF10VI	GCNNNNNNNGC	8 cut(s)	29, 38, 362, 397, 429, 443, 497, 755
HpyF3I	CTNAG	7 cut(s)	13, 186, 663, 798, 804, 865, 938
HpySE526I	ACGT	3 cut(s)	59, 531, 675
Hsp92I	GRCGYC	2 cut(s)	423, 498
HspAI	GCGC	4 cut(s)	330, 363, 444, 498
KasI	GGCGCC	1 cut(s)	497
Kzo9I	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
LguI	GCTCTTC	1 cut(s)	152
LmnI	GCTCC	3 cut(s)	1180, 1435, 1930
Lsp1109I	GCAGC	6 cut(s)	258, 378, 1263, 1366, 1489, 1843
LweI	GCATC	2 cut(s)	1288, 1366
MabI	ACCWGGT	1 cut(s)	552
MaeI	CTAG	8 cut(s)	117, 182, 206, 243, 281, 1011, 1265, 1304
MaeII	ACGT	3 cut(s)	59, 531, 675
MalI	GATC	8 cut(s)	290, 735, 1098, 1603, 1766, 1812, 1905, 1945
MboI	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
MboII	GAAGA	6 cut(s)	139, 142, 185, 331, 1099, 1535
MfeI	CAATTG	2 cut(s)	346, 1404
MhlI	GDGCHC	3 cut(s)	25, 234, 1641
MluCI	AATT	7 cut(s)	346, 885, 912, 1319, 1332, 1404, 1527
Mly113I	GGCGCC	1 cut(s)	498
MlyI	GAGTC	1 cut(s)	728
MmeI	TCCRAC	3 cut(s)	406, 1025, 1048
MroXI	GAANNNNTTC	1 cut(s)	1803
MseI	TTAA	5 cut(s)	1146, 1187, 1257, 1496, 1656
MslI	CAYNNNNRTG	4 cut(s)	848, 903, 1650, 1867
MspI	CCGG	3 cut(s)	165, 515, 848
MspR9I	CCNGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
MunI	CAATTG	2 cut(s)	346, 1404
Mva1269I	GAATGC	1 cut(s)	1344
MvaI	CCWGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
MvnI	CGCG	2 cut(s)	356, 446
MwoI	GCNNNNNNNGC	8 cut(s)	29, 38, 362, 397, 429, 443, 497, 755
NarI	GGCGCC	1 cut(s)	498
NdeII	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
NlaIV	GGNNCC	3 cut(s)	169, 385, 499
NmeAIII	GCCGAG	4 cut(s)	391, 458, 529, 971
NmuCI	GTSAC	7 cut(s)	527, 781, 787, 841, 930, 1221, 1306
NspI	RCATGY	4 cut(s)	1023, 1649, 1713, 1721
OliI	CACNNNNGTG	1 cut(s)	848
PaeI	GCATGC	1 cut(s)	1649
PagI	TCATGA	1 cut(s)	1807
PceI	AGGCCT	1 cut(s)	1673
PciSI	GCTCTTC	1 cut(s)	152
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	1 cut(s)	1344
PdmI	GAANNNNTTC	1 cut(s)	1803
PfeI	GAWTC	3 cut(s)	408, 853, 1448
PflFI	GACNNNGTC	2 cut(s)	554, 928
PflMI	CCANNNNNTGG	1 cut(s)	1421
PfoI	TCCNGGA	1 cut(s)	1165
PkrI	GCNGC	8 cut(s)	86, 248, 393, 502, 1278, 1381, 1479, 1858
PleI	GAGTC	1 cut(s)	727
PluTI	GGCGCC	1 cut(s)	501
PpsI	GAGTC	1 cut(s)	727
PpuMI	RGGWCCY	1 cut(s)	262
PshBI	ATTAAT	1 cut(s)	1257
PsiI	TTATAA	1 cut(s)	1542
Psp124BI	GAGCTC	1 cut(s)	234
Psp5II	RGGWCCY	1 cut(s)	262
Psp6I	CCWGG	6 cut(s)	302, 552, 1165, 1205, 1640, 1740
PspEI	GGTNACC	1 cut(s)	1559
PspGI	CCWGG	6 cut(s)	302, 552, 1165, 1205, 1640, 1740
PspN4I	GGNNCC	3 cut(s)	169, 385, 499
PspPI	GGNCC	3 cut(s)	262, 384, 550
PspPPI	RGGWCCY	1 cut(s)	262
PsyI	GACNNNGTC	2 cut(s)	554, 928
RsaI	GTAC	1 cut(s)	881
RsaNI	GTAC	1 cut(s)	880
RseI	CAYNNNNRTG	4 cut(s)	848, 903, 1650, 1867
SacI	GAGCTC	1 cut(s)	234
SalI	GTCGAC	1 cut(s)	236
SapI	GCTCTTC	1 cut(s)	152
SaqAI	TTAA	5 cut(s)	1146, 1187, 1257, 1496, 1656
SatI	GCNGC	8 cut(s)	85, 247, 392, 501, 1277, 1380, 1478, 1857
Sau3AI	GATC	8 cut(s)	288, 733, 1096, 1601, 1764, 1810, 1903, 1943
Sau96I	GGNCC	3 cut(s)	262, 384, 550
SchI	GAGTC	1 cut(s)	728
ScrFI	CCNGG	6 cut(s)	304, 554, 1167, 1207, 1642, 1742
SduI	GDGCHC	3 cut(s)	25, 234, 1641
SexAI	ACCWGGT	1 cut(s)	552
SfaNI	GCATC	2 cut(s)	1288, 1366
SfoI	GGCGCC	1 cut(s)	499
SinI	GGWCC	3 cut(s)	262, 384, 550
SmiMI	CAYNNNNRTG	4 cut(s)	848, 903, 1650, 1867
SmlI	CTYRAG	3 cut(s)	89, 737, 1463
SmoI	CTYRAG	3 cut(s)	89, 737, 1463
SpeI	ACTAGT	1 cut(s)	1264
SphI	GCATGC	1 cut(s)	1649
Sse9I	AATT	7 cut(s)	346, 885, 912, 1319, 1332, 1404, 1527
SseBI	AGGCCT	1 cut(s)	1673
SsiI	CCGC	8 cut(s)	51, 85, 128, 320, 356, 458, 501, 600
SspDI	GGCGCC	1 cut(s)	497
SspMI	CTAG	8 cut(s)	117, 182, 206, 243, 281, 1011, 1265, 1304
SstI	GAGCTC	1 cut(s)	234
StuI	AGGCCT	1 cut(s)	1673
StyD4I	CCNGG	6 cut(s)	302, 552, 1165, 1205, 1640, 1740
StyI	CCWWGG	2 cut(s)	270, 1674
TaiI	ACGT	3 cut(s)	62, 534, 678
TaqI	TCGA	6 cut(s)	198, 228, 237, 326, 476, 1918
TasI	AATT	7 cut(s)	346, 885, 912, 1319, 1332, 1404, 1527
TauI	GCSGC	2 cut(s)	87, 503
TfiI	GAWTC	3 cut(s)	408, 853, 1448
Tru1I	TTAA	5 cut(s)	1146, 1187, 1257, 1496, 1656
Tru9I	TTAA	5 cut(s)	1146, 1187, 1257, 1496, 1656
TscAI	CASTG	3 cut(s)	407, 1088, 1781
TseFI	GTSAC	7 cut(s)	527, 781, 787, 841, 930, 1221, 1306
TseI	GCWGC	6 cut(s)	246, 391, 1276, 1379, 1477, 1856
Tsp45I	GTSAC	7 cut(s)	527, 781, 787, 841, 930, 1221, 1306
TspDTI	ATGAA	5 cut(s)	142, 1169, 1796, 1812, 1857
TspGWI	ACGGA	2 cut(s)	1205, 1303
TspRI	CASTG	3 cut(s)	407, 1088, 1781
Tth111I	GACNNNGTC	2 cut(s)	554, 928
Van91I	CCANNNNNTGG	1 cut(s)	1421
VpaK11BI	GGWCC	3 cut(s)	262, 384, 550
VspI	ATTAAT	1 cut(s)	1257
XagI	CCTNNNNNAGG	2 cut(s)	135, 269
XapI	RAATTY	1 cut(s)	912
XceI	RCATGY	4 cut(s)	1023, 1649, 1713, 1721
XmiI	GTMKAC	2 cut(s)	237, 1285
XmnI	GAANNNNTTC	1 cut(s)	1803
XspI	CTAG	8 cut(s)	117, 182, 206, 243, 281, 1011, 1265, 1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.