Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0013169

Physical Location & Seq

Genomic Coordinates Forward (+)

8231498 .. 8235197

Gene Structure 3700 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011283

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGTCCACATCCTCAGCCCGAGCACGGCTGGCTCTCATAGCCCTCCTCTCCGCCACCACGTTCTACTGTTTCTACAAATCTCGGCGCCTCAAGCAACTCTCCCTAAACCCTAACCCTAGCTCCTCTCCGCCTCGCAAAGGCAAGCTCTTCTTCATTTCCCAAACCGGAACCTCCAAAGCCCTAGCTCAGCGTCTTCTCGAACTTCTAGCCTCCAATGGCCTCGCCTTCGAGCTCGTCGACCCTAGCAGCTACGAGCCAGAGGACCTCCCCAAGGAAGCCCTAGTTCTGATCGTCGCTTCCACCTGGGACGATGGACAACCGCCTTCGAGCGCCAAGTTCTTCACCAATTGGCTTGCGGAGAGCGCCGATGACTTCAGAGTGGGGTCCATGCTGCTCTCGCAGTGCAGATTCTCGGTGTTCGGCGTCGGAAGCCGAGCCTACGGCGCGTCGTTCAATGCGGTGGGGAGGGACTTGTCGAAGTGGATGAGGGCGTTGGGCGCCGCCGAGATATTGCCGGTTTGGGAAGGTGACGTGGACGACGGGGATATAGACCAGGTCTTTGAGGCTTGGAGTGGTAAGCTGATGAGGTTTTTGAAGGGCGGTGTGGCCGAAAACGGTGTCGCTTTGGGTAATGGTGTTGGTGCTGAAGGTGAAGCTGAGTATTCTGACGTGTCAGATTATGAGGAGGAGGAGACTGTGGTTGAGTCTGGGGTTGTTGATCTTGAGGACATTGCAGGTAAAGCACCTTCAAGGGTGACGGTGACGGTGGCTAAGACTAAGACCAATGGGATAATGAATGGTAAAAGAGATATGGTCACCCCGGTGATTCGTGCCAGCTTAGAGAAGCAGGGGTACAAAATTATTGGTTCGCATAGTGGTGTCAAAATTTGCAGATGGACAAAGTCACAGCTTAGAGGCCGAGGTGGTTGCTATAAACACTCGTTTTATGGCATAGAAAGTCATAGGTGCATGGAGGCAACCCCTAGTTTGGCATGTGCCAATAAATGTGTTTTCTGTTGGAGACATCATACAAACCCTGTTGGAAAGAGTTGGCAGTGGAAGATGGACGATCCATTTGAGATTGTGAATACTGCCATAGACCTGCACAGTAAAATGATTAAGCAAATGAAAGGAGTTCCTGGAGTTACATTGGAGCGATTAACAGAGGGTCTCTCTCCCAGGCATTGTGCCTTGTCACTTGTTGGTGAACCTATTATGTATCCAGAGATTAATACACTAATAGATGAGCTGCATCGTAGACGGATTTCTACTTTTCTAGTGACAAATGCTCAATTCCCTGAAAAAATTAGAATGCTGAAACCTATTACACAGTTATATGTAAGTGTGGATGCTGCAACTAAAGAGAGTTTGAAGGCGATTGACAGGCCACTTTTTGGAGATTTTTGGGAGCGATTTATTGATTCCTTGAAAGCTCTCGAGGAAAAACAGCAGCGAACTGTTTATCGCTTAACTTTGGTCAAGGGATGGAATACAGAAGAAATTGAGGCTTATTATAACATCTTTAGCATTGGTAACCCCGATTTTGTTGAAATCAAAGGAGTTACATATTGTGGATCGTCTGCTACCTCAAAGTTGACGATGGAGAATGTGCCCTGGCATGCTGATGTTAAAGCTTTTTCAGAGGCCCTGGCTTTGAGAAGTAACGGCGAGTATGAGGTCGCATGTGAGCATGTCCACTCATGTTGTGTCCTCCTGGCAAAAACTAAAAAGTTCAAGATCGATGGGCAGTGGTTCACATGGATAGACTATGAAAAGTTTCATGATCTGGTGGCTTCTGGAAAACCCTTTAACAGTAATGATTATATGGCTGCCACACCTTCATGGGCTGTTTATGGGGCAGTTGAAGGTGGATTTGATCCCTATCAATCTCGATATAAGAAGGAGCGACATCACAGATCAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Flavodoxin_1 Radical_SAM Wyosine_form

Protein Analysis

643

Amino Acids

71.67

Weight (kDa)

7.19

Isoelectric Point (pI)

35.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	49 - 190	3.3e-27	Flavodoxin
Radical_SAM	PF04055	330 - 505	3e-15	Radical SAM superfamily
Wyosine_form	PF08608	511 - 574	9.2e-24	Wyosine base formation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75200
fragaria_vesca	FvH4_2g39810 FvH4_2g39810
malus_domestica	MD08G1031900.v1.1 MD15G1027800.v1.1
prunus_persica	Prupe.1G379500_v2.0.a1 Prupe.1G379500_v2.0.a1
pyrus_communis	pycom08g02520 pycom15g02380
rosa_chinensis	RchiOBHm_Chr6g0301031
rosa_laevigata	RLG00000011283
rosa_multiflora	Rmu_co8483439.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167240
rosa_rugosa	Rorug06G0300100
rosa_samantha	Rh6AG414000 Rh6BG421000 Rh6CG428600 Rh6DG414000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
Acc36I	ACCTGC	2 cut(s)	725, 1110
AccB1I	GGYRCC	2 cut(s)	84, 497
AccB7I	CCANNNNNTGG	1 cut(s)	1394
AccI	GTMKAC	2 cut(s)	237, 1258
AccII	CGCG	1 cut(s)	446
AciI	CCGC	7 cut(s)	51, 128, 320, 356, 458, 501, 600
AclWI	GGATC	3 cut(s)	1064, 1582, 1871
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	1 cut(s)	885
AcuI	CTGAAG	2 cut(s)	358, 666
AcyI	GRCGYC	3 cut(s)	85, 423, 498
AfaI	GTAC	1 cut(s)	854
AfiI	CCNNNNNNNGG	5 cut(s)	24, 137, 271, 988, 1394
AflIII	ACRYGT	1 cut(s)	669
AgsI	TTSAA	8 cut(s)	454, 595, 750, 1372, 1429, 1550, 1735, 1865
AjiI	CACGTC	2 cut(s)	532, 670
AjnI	CCWGG	7 cut(s)	302, 552, 1138, 1178, 1613, 1647, 1713
AleI	CACNNNNGTG	1 cut(s)	821
Alw21I	GWGCWC	2 cut(s)	25, 234
Alw26I	GTCTC	3 cut(s)	686, 1015, 1175
AlwI	GGATC	3 cut(s)	1064, 1582, 1871
Ama87I	CYCGRG	2 cut(s)	18, 1436
AoxI	GGCC	5 cut(s)	217, 606, 916, 1385, 1644
ApeKI	GCWGC	6 cut(s)	246, 391, 1249, 1352, 1450, 1829
ApoI	RAATTY	1 cut(s)	885
ArsI	GACNNNNNNTTYG	6 cut(s)	542, 574, 603, 635, 1058, 1090
AseI	ATTAAT	1 cut(s)	1230
Asp700I	GAANNNNTTC	1 cut(s)	1776
AspLEI	GCGC	5 cut(s)	87, 332, 365, 446, 500
AspS9I	GGNCC	3 cut(s)	262, 384, 1645
AsuC2I	CCSGG	1 cut(s)	821
AsuHPI	GGTGA	8 cut(s)	334, 539, 662, 766, 772, 808, 835, 1217
AvaI	CYCGRG	2 cut(s)	18, 1436
AvaII	GGWCC	2 cut(s)	262, 384
BaeGI	GKGCMC	1 cut(s)	1614
BanI	GGYRCC	2 cut(s)	84, 497
BanII	GRGCYC	1 cut(s)	234
BarI	GAAGNNNNNNTAC	4 cut(s)	730, 762, 836, 868
BbsI	GAAGAC	1 cut(s)	185
Bbv12I	GWGCWC	2 cut(s)	25, 234
BbvCI	CCTCAGC	1 cut(s)	13
BbvI	GCAGC	6 cut(s)	258, 378, 1236, 1339, 1462, 1816
BccI	CCATC	6 cut(s)	305, 888, 1057, 1479, 1594, 1736
BceAI	ACGGC	3 cut(s)	41, 457, 1681
BcgI	CGANNNNNNTGC	2 cut(s)	909, 943
BciT130I	CCWGG	7 cut(s)	304, 554, 1140, 1180, 1615, 1649, 1715
BciVI	GTATCC	1 cut(s)	1230
BcnI	CCSGG	1 cut(s)	821
BcoDI	GTCTC	3 cut(s)	686, 1015, 1175
BfaI	CTAG	7 cut(s)	117, 182, 206, 243, 281, 984, 1277
BfoI	RGCGCY	4 cut(s)	88, 333, 366, 501
BfuAI	ACCTGC	2 cut(s)	725, 1110
BfuI	GTATCC	1 cut(s)	1230
BisI	GCNGC	7 cut(s)	247, 392, 501, 1250, 1353, 1451, 1830
BlpI	GCTNAGC	1 cut(s)	186
BlsI	GCNGC	7 cut(s)	248, 393, 502, 1251, 1354, 1452, 1831
Bme1390I	CCNGG	8 cut(s)	304, 554, 821, 1140, 1180, 1615, 1649, 1715
Bme18I	GGWCC	2 cut(s)	262, 384
BmeT110I	CYCGRG	2 cut(s)	18, 1436
BmgBI	CACGTC	2 cut(s)	532, 670
BmgT120I	GGNCC	3 cut(s)	262, 384, 1645
BmiI	GGNNCC	4 cut(s)	86, 169, 385, 499
BmrFI	CCNGG	8 cut(s)	304, 554, 821, 1140, 1180, 1615, 1649, 1715
BmsI	GCATC	2 cut(s)	1261, 1339
BpiI	GAAGAC	1 cut(s)	185
BplI	GAGNNNNNCTC	2 cut(s)	1157, 1189
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	1 cut(s)	13
Bpu1102I	GCTNAGC	1 cut(s)	186
BpuEI	CTTGAG	2 cut(s)	74, 743
BpuMI	CCSGG	1 cut(s)	821
Bsa29I	ATCGAT	1 cut(s)	1740
BsaBI	GATNNNNATC	1 cut(s)	1881
BsaHI	GRCGYC	3 cut(s)	85, 423, 498
BsaI	GGTCTC	1 cut(s)	1175
BsaJI	CCNNGG	7 cut(s)	270, 303, 819, 919, 1178, 1613, 1647
BsaWI	WCCGGW	1 cut(s)	164
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	5 cut(s)	24, 137, 271, 988, 1394
Bse118I	RCCGGY	1 cut(s)	514
Bse1I	ACTGG	1 cut(s)	1924
Bse3DI	GCAATG	1 cut(s)	729
Bse8I	GATNNNNATC	1 cut(s)	1881
BseBI	CCWGG	7 cut(s)	304, 554, 1140, 1180, 1615, 1649, 1715
BseCI	ATCGAT	1 cut(s)	1740
BseDI	CCNNGG	7 cut(s)	270, 303, 819, 919, 1178, 1613, 1647
BseGI	GGATG	4 cut(s)	8, 489, 1354, 1490
BseJI	GATNNNNATC	1 cut(s)	1881
BseLI	CCNNNNNNNGG	5 cut(s)	24, 137, 271, 988, 1394
BseMI	GCAATG	1 cut(s)	729
BseMII	CTCAG	3 cut(s)	27, 200, 648
BseNI	ACTGG	1 cut(s)	1924
BseRI	GAGGAG	5 cut(s)	35, 112, 698, 701, 704
BseSI	GKGCMC	1 cut(s)	1614
BseXI	GCAGC	6 cut(s)	258, 378, 1236, 1339, 1462, 1816
BsgI	GTGCAG	2 cut(s)	424, 1088
Bsh1236I	CGCG	1 cut(s)	446
BshFI	GGCC	5 cut(s)	219, 608, 918, 1387, 1646
BshNI	GGYRCC	2 cut(s)	84, 497
BshVI	ATCGAT	1 cut(s)	1740
BsiHKAI	GWGCWC	2 cut(s)	25, 234
BsiHKCI	CYCGRG	2 cut(s)	18, 1436
BsiSI	CCGG	3 cut(s)	165, 515, 821
BslFI	GGGAC	2 cut(s)	320, 482
BslI	CCNNNNNNNGG	5 cut(s)	24, 137, 271, 988, 1394
BsmAI	GTCTC	3 cut(s)	686, 1015, 1175
BsmFI	GGGAC	2 cut(s)	320, 482
BsmI	GAATGC	1 cut(s)	1317
BsnI	GGCC	5 cut(s)	219, 608, 918, 1387, 1646
Bso31I	GGTCTC	1 cut(s)	1175
BsoBI	CYCGRG	2 cut(s)	18, 1436
Bsp1286I	GDGCHC	3 cut(s)	25, 234, 1614
Bsp143I	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
Bsp1720I	GCTNAGC	1 cut(s)	186
BspACI	CCGC	7 cut(s)	51, 128, 320, 356, 458, 501, 600
BspANI	GGCC	5 cut(s)	219, 608, 918, 1387, 1646
BspCNI	CTCAG	3 cut(s)	26, 199, 649
BspDI	ATCGAT	1 cut(s)	1740
BspFNI	CGCG	1 cut(s)	446
BspHI	TCATGA	1 cut(s)	1780
BspLI	GGNNCC	4 cut(s)	86, 169, 385, 499
BspMI	ACCTGC	2 cut(s)	725, 1110
BspPI	GGATC	3 cut(s)	1064, 1582, 1871
BspQI	GCTCTTC	1 cut(s)	152
BspT107I	GGYRCC	2 cut(s)	84, 497
BspTNI	GGTCTC	1 cut(s)	1175
BsrDI	GCAATG	1 cut(s)	729
BsrFI	RCCGGY	1 cut(s)	514
BsrI	ACTGG	1 cut(s)	1924
BssAI	RCCGGY	1 cut(s)	514
BssECI	CCNNGG	7 cut(s)	270, 303, 819, 919, 1178, 1613, 1647
BssMI	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
BssNI	GRCGYC	3 cut(s)	85, 423, 498
BssT1I	CCWWGG	1 cut(s)	270
Bst2UI	CCWGG	7 cut(s)	304, 554, 1140, 1180, 1615, 1649, 1715
Bst4CI	ACNGT	9 cut(s)	68, 617, 697, 760, 766, 1109, 1332, 1459, 1814
Bst6I	CTCTTC	1 cut(s)	152
BstACI	GRCGYC	3 cut(s)	85, 423, 498
BstC8I	GCNNGC	5 cut(s)	30, 143, 354, 835, 1620
BstDEI	CTNAG	7 cut(s)	13, 186, 657, 771, 777, 838, 911
BstEII	GGTNACC	2 cut(s)	814, 1532
BstENI	CCTNNNNNAGG	2 cut(s)	135, 269
BstF5I	GGATG	4 cut(s)	8, 489, 1354, 1490
BstFNI	CGCG	1 cut(s)	446
BstH2I	RGCGCY	4 cut(s)	88, 333, 366, 501
BstHHI	GCGC	5 cut(s)	87, 332, 365, 446, 500
BstKTI	GATC	8 cut(s)	291, 721, 1072, 1577, 1740, 1786, 1879, 1919
BstMAI	GTCTC	3 cut(s)	686, 1015, 1175
BstMBI	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 38, 91, 362, 397, 429, 443, 497, 740
BstNI	CCWGG	7 cut(s)	304, 554, 1140, 1180, 1615, 1649, 1715
BstNSI	RCATGY	4 cut(s)	996, 1622, 1686, 1694
BstPI	GGTNACC	2 cut(s)	814, 1532
BstSCI	CCNGG	8 cut(s)	302, 552, 819, 1138, 1178, 1613, 1647, 1713
BstSLI	GKGCMC	1 cut(s)	1614
BstUI	CGCG	1 cut(s)	446
BstV1I	GCAGC	6 cut(s)	258, 378, 1236, 1339, 1462, 1816
BstV2I	GAAGAC	1 cut(s)	185
Bsu15I	ATCGAT	1 cut(s)	1740
BsuI	GTATCC	1 cut(s)	1230
BsuRI	GGCC	5 cut(s)	219, 608, 918, 1387, 1646
BsuTUI	ATCGAT	1 cut(s)	1740
BtrI	CACGTC	2 cut(s)	532, 670
BtsCI	GGATG	4 cut(s)	8, 489, 1354, 1490
BtsI	GCAGTG	3 cut(s)	407, 1061, 1754
BtsIMutI	CAGTG	3 cut(s)	407, 1061, 1754
BveI	ACCTGC	2 cut(s)	725, 1110
Cac8I	GCNNGC	5 cut(s)	30, 143, 354, 835, 1620
CciI	TCATGA	1 cut(s)	1780
CfoI	GCGC	5 cut(s)	87, 332, 365, 446, 500
Cfr10I	RCCGGY	1 cut(s)	514
Cfr13I	GGNCC	3 cut(s)	262, 384, 1645
ClaI	ATCGAT	1 cut(s)	1740
CseI	GACGC	3 cut(s)	179, 412, 435
CsiI	ACCWGGT	1 cut(s)	552
Csp6I	GTAC	1 cut(s)	853
CspCI	CAANNNNNGTGG	2 cut(s)	1685, 1720
CviQI	GTAC	1 cut(s)	853
DdeI	CTNAG	7 cut(s)	13, 186, 657, 771, 777, 838, 911
DinI	GGCGCC	2 cut(s)	86, 499
DpnI	GATC	8 cut(s)	290, 720, 1071, 1576, 1739, 1785, 1878, 1918
DpnII	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	1 cut(s)	152
EarI	CTCTTC	1 cut(s)	152
EciI	GGCGGA	2 cut(s)	40, 117
Ecl136II	GAGCTC	1 cut(s)	232
Eco130I	CCWWGG	1 cut(s)	270
Eco24I	GRGCYC	1 cut(s)	234
Eco31I	GGTCTC	1 cut(s)	1175
Eco47I	GGWCC	2 cut(s)	262, 384
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	2 cut(s)	358, 666
Eco88I	CYCGRG	2 cut(s)	18, 1436
Eco91I	GGTNACC	2 cut(s)	814, 1532
EcoICRI	GAGCTC	1 cut(s)	232
EcoNI	CCTNNNNNAGG	2 cut(s)	135, 269
EcoO109I	RGGNCCY	2 cut(s)	262, 1645
EcoO65I	GGTNACC	2 cut(s)	814, 1532
EcoRII	CCWGG	7 cut(s)	302, 552, 1138, 1178, 1613, 1647, 1713
EcoT14I	CCWWGG	1 cut(s)	270
EcoT38I	GRGCYC	1 cut(s)	234
EgeI	GGCGCC	2 cut(s)	86, 499
EheI	GGCGCC	2 cut(s)	86, 499
ErhI	CCWWGG	1 cut(s)	270
FalI	AAGNNNNNCTT	2 cut(s)	134, 166
FaqI	GGGAC	2 cut(s)	320, 482
FblI	GTMKAC	2 cut(s)	237, 1258
Fnu4HI	GCNGC	7 cut(s)	247, 392, 501, 1250, 1353, 1451, 1830
FokI	GGATG	3 cut(s)	496, 1361, 1497
FriOI	GRGCYC	1 cut(s)	234
Fsp4HI	GCNGC	7 cut(s)	247, 392, 501, 1250, 1353, 1451, 1830
FspBI	CTAG	7 cut(s)	117, 182, 206, 243, 281, 984, 1277
GlaI	GCGC	5 cut(s)	86, 331, 364, 445, 499
GluI	GCNGC	7 cut(s)	247, 392, 501, 1250, 1353, 1451, 1830
GsuI	CTGGAG	1 cut(s)	1161
HaeII	RGCGCY	4 cut(s)	88, 333, 366, 501
HaeIII	GGCC	5 cut(s)	219, 608, 918, 1387, 1646
HapII	CCGG	3 cut(s)	165, 515, 821
HgaI	GACGC	3 cut(s)	179, 412, 435
HhaI	GCGC	5 cut(s)	87, 332, 365, 446, 500
Hin1I	GRCGYC	3 cut(s)	85, 423, 498
Hin6I	GCGC	5 cut(s)	85, 330, 363, 444, 498
HinP1I	GCGC	5 cut(s)	85, 330, 363, 444, 498
HincII	GTYRAC	2 cut(s)	238, 1596
HindII	GTYRAC	2 cut(s)	238, 1596
HindIII	AAGCTT	1 cut(s)	1632
HinfI	GANTC	4 cut(s)	408, 704, 826, 1421
HpaII	CCGG	3 cut(s)	165, 515, 821
HphI	GGTGA	8 cut(s)	334, 539, 662, 766, 772, 808, 835, 1217
Hpy166II	GTNNAC	8 cut(s)	6, 238, 535, 1208, 1259, 1596, 1696, 1755
Hpy188I	TCNGA	6 cut(s)	288, 377, 428, 667, 676, 1642
Hpy188III	TCNNGA	8 cut(s)	197, 722, 1223, 1436, 1735, 1781, 1797, 1890
Hpy8I	GTNNAC	8 cut(s)	6, 238, 535, 1208, 1259, 1596, 1696, 1755
Hpy99I	CGWCG	5 cut(s)	239, 296, 428, 451, 542
HpyCH4III	ACNGT	9 cut(s)	68, 617, 697, 760, 766, 1109, 1332, 1459, 1814
HpyCH4IV	ACGT	3 cut(s)	59, 531, 669
HpyCH4V	TGCA	7 cut(s)	405, 734, 891, 969, 1105, 1252, 1355
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 38, 91, 362, 397, 429, 443, 497, 740
HpyF3I	CTNAG	7 cut(s)	13, 186, 657, 771, 777, 838, 911
HpySE526I	ACGT	3 cut(s)	59, 531, 669
Hsp92I	GRCGYC	3 cut(s)	85, 423, 498
HspAI	GCGC	5 cut(s)	85, 330, 363, 444, 498
KasI	GGCGCC	2 cut(s)	84, 497
Kzo9I	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
LguI	GCTCTTC	1 cut(s)	152
LmnI	GCTCC	4 cut(s)	125, 1153, 1408, 1903
Lsp1109I	GCAGC	6 cut(s)	258, 378, 1236, 1339, 1462, 1816
LweI	GCATC	2 cut(s)	1261, 1339
MabI	ACCWGGT	1 cut(s)	552
MaeI	CTAG	7 cut(s)	117, 182, 206, 243, 281, 984, 1277
MaeII	ACGT	3 cut(s)	59, 531, 669
MalI	GATC	8 cut(s)	290, 720, 1071, 1576, 1739, 1785, 1878, 1918
MboI	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
MboII	GAAGA	6 cut(s)	139, 142, 185, 331, 1072, 1508
MfeI	CAATTG	1 cut(s)	346
MhlI	GDGCHC	3 cut(s)	25, 234, 1614
MluCI	AATT	6 cut(s)	346, 858, 885, 1292, 1305, 1500
Mly113I	GGCGCC	2 cut(s)	85, 498
MlyI	GAGTC	1 cut(s)	713
MmeI	TCCRAC	3 cut(s)	406, 998, 1021
MroXI	GAANNNNTTC	1 cut(s)	1776
MseI	TTAA	6 cut(s)	1119, 1160, 1230, 1469, 1629, 1809
MslI	CAYNNNNRTG	4 cut(s)	821, 876, 1623, 1840
MspI	CCGG	3 cut(s)	165, 515, 821
MspR9I	CCNGG	8 cut(s)	304, 554, 821, 1140, 1180, 1615, 1649, 1715
MunI	CAATTG	1 cut(s)	346
Mva1269I	GAATGC	1 cut(s)	1317
MvaI	CCWGG	7 cut(s)	304, 554, 1140, 1180, 1615, 1649, 1715
MvnI	CGCG	1 cut(s)	446
MwoI	GCNNNNNNNGC	9 cut(s)	29, 38, 91, 362, 397, 429, 443, 497, 740
NarI	GGCGCC	2 cut(s)	85, 498
NciI	CCSGG	1 cut(s)	821
NdeII	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
NlaIV	GGNNCC	4 cut(s)	86, 169, 385, 499
NmeAIII	GCCGAG	4 cut(s)	61, 458, 529, 944
NmuCI	GTSAC	7 cut(s)	527, 754, 760, 814, 903, 1194, 1279
NspI	RCATGY	4 cut(s)	996, 1622, 1686, 1694
OliI	CACNNNNGTG	1 cut(s)	821
PaeI	GCATGC	1 cut(s)	1622
PaeR7I	CTCGAG	1 cut(s)	1436
PagI	TCATGA	1 cut(s)	1780
PciSI	GCTCTTC	1 cut(s)	152
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	1 cut(s)	1317
PdmI	GAANNNNTTC	1 cut(s)	1776
PfeI	GAWTC	3 cut(s)	408, 826, 1421
PflFI	GACNNNGTC	2 cut(s)	554, 901
PflMI	CCANNNNNTGG	1 cut(s)	1394
PfoI	TCCNGGA	1 cut(s)	1138
PkrI	GCNGC	7 cut(s)	248, 393, 502, 1251, 1354, 1452, 1831
PleI	GAGTC	1 cut(s)	712
PluTI	GGCGCC	2 cut(s)	88, 501
PpsI	GAGTC	1 cut(s)	712
PpuMI	RGGWCCY	1 cut(s)	262
PshBI	ATTAAT	1 cut(s)	1230
PsiI	TTATAA	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	234
Psp5II	RGGWCCY	1 cut(s)	262
Psp6I	CCWGG	7 cut(s)	302, 552, 1138, 1178, 1613, 1647, 1713
PspEI	GGTNACC	2 cut(s)	814, 1532
PspGI	CCWGG	7 cut(s)	302, 552, 1138, 1178, 1613, 1647, 1713
PspN4I	GGNNCC	4 cut(s)	86, 169, 385, 499
PspPI	GGNCC	3 cut(s)	262, 384, 1645
PspPPI	RGGWCCY	1 cut(s)	262
PsyI	GACNNNGTC	2 cut(s)	554, 901
RsaI	GTAC	1 cut(s)	854
RsaNI	GTAC	1 cut(s)	853
RseI	CAYNNNNRTG	4 cut(s)	821, 876, 1623, 1840
SacI	GAGCTC	1 cut(s)	234
SalI	GTCGAC	1 cut(s)	236
SapI	GCTCTTC	1 cut(s)	152
SaqAI	TTAA	6 cut(s)	1119, 1160, 1230, 1469, 1629, 1809
SatI	GCNGC	7 cut(s)	247, 392, 501, 1250, 1353, 1451, 1830
Sau3AI	GATC	8 cut(s)	288, 718, 1069, 1574, 1737, 1783, 1876, 1916
Sau96I	GGNCC	3 cut(s)	262, 384, 1645
SchI	GAGTC	1 cut(s)	713
ScrFI	CCNGG	8 cut(s)	304, 554, 821, 1140, 1180, 1615, 1649, 1715
SduI	GDGCHC	3 cut(s)	25, 234, 1614
SexAI	ACCWGGT	1 cut(s)	552
SfaNI	GCATC	2 cut(s)	1261, 1339
SfoI	GGCGCC	2 cut(s)	86, 499
Sfr274I	CTCGAG	1 cut(s)	1436
SinI	GGWCC	2 cut(s)	262, 384
SlaI	CTCGAG	1 cut(s)	1436
SmiMI	CAYNNNNRTG	4 cut(s)	821, 876, 1623, 1840
SmlI	CTYRAG	3 cut(s)	89, 722, 1436
SmoI	CTYRAG	3 cut(s)	89, 722, 1436
SphI	GCATGC	1 cut(s)	1622
Sse9I	AATT	6 cut(s)	346, 858, 885, 1292, 1305, 1500
SsiI	CCGC	7 cut(s)	51, 128, 320, 356, 458, 501, 600
SspDI	GGCGCC	2 cut(s)	84, 497
SspMI	CTAG	7 cut(s)	117, 182, 206, 243, 281, 984, 1277
SstI	GAGCTC	1 cut(s)	234
StyD4I	CCNGG	8 cut(s)	302, 552, 819, 1138, 1178, 1613, 1647, 1713
StyI	CCWWGG	1 cut(s)	270
TaaI	ACNGT	9 cut(s)	68, 617, 697, 760, 766, 1109, 1332, 1459, 1814
TaiI	ACGT	3 cut(s)	62, 534, 672
TaqI	TCGA	8 cut(s)	198, 228, 237, 326, 476, 1437, 1740, 1891
TasI	AATT	6 cut(s)	346, 858, 885, 1292, 1305, 1500
TauI	GCSGC	1 cut(s)	503
TfiI	GAWTC	3 cut(s)	408, 826, 1421
Tru1I	TTAA	6 cut(s)	1119, 1160, 1230, 1469, 1629, 1809
Tru9I	TTAA	6 cut(s)	1119, 1160, 1230, 1469, 1629, 1809
TscAI	CASTG	3 cut(s)	407, 1061, 1754
TseFI	GTSAC	7 cut(s)	527, 754, 760, 814, 903, 1194, 1279
TseI	GCWGC	6 cut(s)	246, 391, 1249, 1352, 1450, 1829
Tsp45I	GTSAC	7 cut(s)	527, 754, 760, 814, 903, 1194, 1279
TspDTI	ATGAA	6 cut(s)	142, 809, 1142, 1769, 1785, 1830
TspGWI	ACGGA	1 cut(s)	1276
TspRI	CASTG	3 cut(s)	407, 1061, 1754
Tth111I	GACNNNGTC	2 cut(s)	554, 901
Van91I	CCANNNNNTGG	1 cut(s)	1394
VpaK11BI	GGWCC	2 cut(s)	262, 384
VspI	ATTAAT	1 cut(s)	1230
XagI	CCTNNNNNAGG	2 cut(s)	135, 269
XapI	RAATTY	1 cut(s)	885
XceI	RCATGY	4 cut(s)	996, 1622, 1686, 1694
XhoI	CTCGAG	1 cut(s)	1436
XmiI	GTMKAC	2 cut(s)	237, 1258
XmnI	GAANNNNTTC	1 cut(s)	1776
XspI	CTAG	7 cut(s)	117, 182, 206, 243, 281, 984, 1277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.