U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31890 AT4G31890 AT4G31890 |
| fragaria_vesca | FvH4_2g40980 FvH4_2g40980 |
| malus_domestica | MD08G1057900.v1.1 MD15G1038300.v1.1 |
| prunus_persica | Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1 |
| pyrus_communis | pycom08g04810 pycom15g03580 |
| rosa_chinensis | RchiOBHm_Chr6g0299591 |
| rosa_laevigata | RLG00000011407 |
| rosa_multiflora | Rmu_sc0024600.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00168530 |
| rosa_rugosa | Rorug06G0290600 Rorug06G0290700 |
| rosa_samantha | Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800 |
| rosa_wichuraiana | Rw6G035140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 602 |
| AatII | GACGTC | 2 cut(s) | 27, 531 |
| Acc36I | ACCTGC | 2 cut(s) | 376, 602 |
| AccB1I | GGYRCC | 2 cut(s) | 146, 737 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1271 |
| AccBSI | CCGCTC | 3 cut(s) | 188, 419, 502 |
| AccII | CGCG | 4 cut(s) | 278, 369, 854, 990 |
| AclWI | GGATC | 8 cut(s) | 24, 37, 288, 581, 736, 871, 1196, 1458 |
| AcoI | YGGCCR | 2 cut(s) | 3, 444 |
| AcsI | RAATTY | 1 cut(s) | 769 |
| AcuI | CTGAAG | 3 cut(s) | 383, 653, 687 |
| AcyI | GRCGYC | 8 cut(s) | 24, 132, 147, 180, 324, 399, 489, 528 |
| AfaI | GTAC | 3 cut(s) | 987, 1162, 1377 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 87, 298, 506, 725, 1006, 1271, 1304 |
| AflII | CTTAAG | 2 cut(s) | 764, 1471 |
| AgsI | TTSAA | 6 cut(s) | 644, 834, 1021, 1459, 1479, 1485 |
| AjiI | CACGTC | 1 cut(s) | 433 |
| AjnI | CCWGG | 2 cut(s) | 291, 1036 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1258, 1290, 1425, 1457 |
| Alw21I | GWGCWC | 2 cut(s) | 624, 820 |
| Alw26I | GTCTC | 3 cut(s) | 89, 430, 897 |
| Alw44I | GTGCAC | 1 cut(s) | 620 |
| AlwI | GGATC | 8 cut(s) | 24, 37, 288, 581, 736, 871, 1196, 1458 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 617, 1387 |
| Ama87I | CYCGRG | 1 cut(s) | 569 |
| AoxI | GGCC | 5 cut(s) | 3, 312, 444, 964, 1419 |
| ApaLI | GTGCAC | 1 cut(s) | 620 |
| ApeKI | GCWGC | 5 cut(s) | 141, 241, 596, 789, 1250 |
| ApoI | RAATTY | 1 cut(s) | 769 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 248, 280 |
| AspLEI | GCGC | 4 cut(s) | 149, 369, 1081, 1171 |
| AspS9I | GGNCC | 1 cut(s) | 1419 |
| AsuHPI | GGTGA | 2 cut(s) | 5, 1459 |
| AvaI | CYCGRG | 1 cut(s) | 569 |
| BaeGI | GKGCMC | 1 cut(s) | 624 |
| BalI | TGGCCA | 2 cut(s) | 5, 446 |
| BamHI | GGATCC | 1 cut(s) | 29 |
| BanI | GGYRCC | 2 cut(s) | 146, 737 |
| BanII | GRGCYC | 1 cut(s) | 820 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1043, 1075 |
| BbsI | GAAGAC | 1 cut(s) | 84 |
| Bbv12I | GWGCWC | 2 cut(s) | 624, 820 |
| BbvI | GCAGC | 5 cut(s) | 128, 253, 583, 776, 1262 |
| BceAI | ACGGC | 4 cut(s) | 119, 311, 386, 1480 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 7, 41, 364, 398 |
| BciT130I | CCWGG | 2 cut(s) | 293, 1038 |
| BcoDI | GTCTC | 3 cut(s) | 89, 430, 897 |
| BfaI | CTAG | 1 cut(s) | 1304 |
| BfmI | CTRYAG | 1 cut(s) | 1388 |
| BfoI | RGCGCY | 1 cut(s) | 150 |
| BfrI | CTTAAG | 2 cut(s) | 764, 1471 |
| BfuAI | ACCTGC | 2 cut(s) | 376, 602 |
| Bme1390I | CCNGG | 2 cut(s) | 293, 1038 |
| BmeT110I | CYCGRG | 1 cut(s) | 569 |
| BmgBI | CACGTC | 1 cut(s) | 433 |
| BmgT120I | GGNCC | 1 cut(s) | 1419 |
| BmiI | GGNNCC | 4 cut(s) | 31, 148, 739, 1309 |
| BmrFI | CCNGG | 2 cut(s) | 293, 1038 |
| BmsI | GCATC | 4 cut(s) | 523, 554, 982, 1003 |
| BpiI | GAAGAC | 1 cut(s) | 84 |
| BpuEI | CTTGAG | 1 cut(s) | 715 |
| BsaHI | GRCGYC | 8 cut(s) | 24, 132, 147, 180, 324, 399, 489, 528 |
| BsaJI | CCNNGG | 6 cut(s) | 402, 447, 688, 1036, 1037, 1311 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 87, 298, 506, 725, 1006, 1271, 1304 |
| Bse1I | ACTGG | 2 cut(s) | 201, 867 |
| Bse3DI | GCAATG | 1 cut(s) | 1133 |
| BseBI | CCWGG | 2 cut(s) | 293, 1038 |
| BseDI | CCNNGG | 6 cut(s) | 402, 447, 688, 1036, 1037, 1311 |
| BseGI | GGATG | 3 cut(s) | 77, 656, 1336 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 87, 298, 506, 725, 1006, 1271, 1304 |
| BseMI | GCAATG | 1 cut(s) | 1133 |
| BseMII | CTCAG | 1 cut(s) | 551 |
| BseNI | ACTGG | 2 cut(s) | 201, 867 |
| BseRI | GAGGAG | 4 cut(s) | 55, 371, 427, 1417 |
| BseSI | GKGCMC | 1 cut(s) | 624 |
| BseXI | GCAGC | 5 cut(s) | 128, 253, 583, 776, 1262 |
| BsgI | GTGCAG | 1 cut(s) | 1269 |
| Bsh1236I | CGCG | 4 cut(s) | 278, 369, 854, 990 |
| Bsh1285I | CGRYCG | 1 cut(s) | 46 |
| BshFI | GGCC | 5 cut(s) | 5, 314, 446, 966, 1421 |
| BshNI | GGYRCC | 2 cut(s) | 146, 737 |
| BsiEI | CGRYCG | 1 cut(s) | 46 |
| BsiHKAI | GWGCWC | 2 cut(s) | 624, 820 |
| BsiHKCI | CYCGRG | 1 cut(s) | 569 |
| BslFI | GGGAC | 1 cut(s) | 33 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 87, 298, 506, 725, 1006, 1271, 1304 |
| BsmAI | GTCTC | 3 cut(s) | 89, 430, 897 |
| BsmBI | CGTCTC | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 33 |
| BsmI | GAATGC | 1 cut(s) | 995 |
| BsnI | GGCC | 5 cut(s) | 5, 314, 446, 966, 1421 |
| BsoBI | CYCGRG | 1 cut(s) | 569 |
| Bsp1286I | GDGCHC | 2 cut(s) | 624, 820 |
| BspANI | GGCC | 5 cut(s) | 5, 314, 446, 966, 1421 |
| BspCNI | CTCAG | 1 cut(s) | 550 |
| BspFNI | CGCG | 4 cut(s) | 278, 369, 854, 990 |
| BspLI | GGNNCC | 4 cut(s) | 31, 148, 739, 1309 |
| BspMAI | CTGCAG | 1 cut(s) | 1392 |
| BspMI | ACCTGC | 2 cut(s) | 376, 602 |
| BspPI | GGATC | 8 cut(s) | 24, 37, 288, 581, 736, 871, 1196, 1458 |
| BspT107I | GGYRCC | 2 cut(s) | 146, 737 |
| BspTI | CTTAAG | 2 cut(s) | 764, 1471 |
| BsrBI | CCGCTC | 3 cut(s) | 188, 419, 502 |
| BsrDI | GCAATG | 1 cut(s) | 1133 |
| BsrI | ACTGG | 2 cut(s) | 201, 867 |
| BssECI | CCNNGG | 6 cut(s) | 402, 447, 688, 1036, 1037, 1311 |
| BssNI | GRCGYC | 8 cut(s) | 24, 132, 147, 180, 324, 399, 489, 528 |
| BssT1I | CCWWGG | 3 cut(s) | 447, 688, 1311 |
| Bst2UI | CCWGG | 2 cut(s) | 293, 1038 |
| Bst4CI | ACNGT | 2 cut(s) | 47, 223 |
| Bst6I | CTCTTC | 3 cut(s) | 1169, 1320, 1409 |
| BstACI | GRCGYC | 8 cut(s) | 24, 132, 147, 180, 324, 399, 489, 528 |
| BstAFI | CTTAAG | 2 cut(s) | 764, 1471 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 628, 677 |
| BstC8I | GCNNGC | 7 cut(s) | 151, 276, 427, 444, 477, 1104, 1493 |
| BstDEI | CTNAG | 1 cut(s) | 537 |
| BstDSI | CCRYGG | 1 cut(s) | 402 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1302 |
| BstF5I | GGATG | 3 cut(s) | 77, 656, 1336 |
| BstFNI | CGCG | 4 cut(s) | 278, 369, 854, 990 |
| BstH2I | RGCGCY | 1 cut(s) | 150 |
| BstHHI | GCGC | 4 cut(s) | 149, 369, 1081, 1171 |
| BstMAI | GTCTC | 3 cut(s) | 89, 430, 897 |
| BstMCI | CGRYCG | 1 cut(s) | 46 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 150, 476, 481, 542, 628, 677, 815, 987, 1259 |
| BstNI | CCWGG | 2 cut(s) | 293, 1038 |
| BstSCI | CCNGG | 2 cut(s) | 291, 1036 |
| BstSFI | CTRYAG | 1 cut(s) | 1388 |
| BstSLI | GKGCMC | 1 cut(s) | 624 |
| BstUI | CGCG | 4 cut(s) | 278, 369, 854, 990 |
| BstV1I | GCAGC | 5 cut(s) | 128, 253, 583, 776, 1262 |
| BstV2I | GAAGAC | 1 cut(s) | 84 |
| BstX2I | RGATCY | 4 cut(s) | 29, 280, 728, 1188 |
| BstYI | RGATCY | 4 cut(s) | 29, 280, 728, 1188 |
| BsuRI | GGCC | 5 cut(s) | 5, 314, 446, 966, 1421 |
| BtgI | CCRYGG | 1 cut(s) | 402 |
| BtgZI | GCGATG | 2 cut(s) | 531, 1005 |
| BtrI | CACGTC | 1 cut(s) | 433 |
| BtsCI | GGATG | 3 cut(s) | 77, 656, 1336 |
| BtsI | GCAGTG | 1 cut(s) | 988 |
| BtsIMutI | CAGTG | 2 cut(s) | 663, 988 |
| BveI | ACCTGC | 2 cut(s) | 376, 602 |
| Cac8I | GCNNGC | 7 cut(s) | 151, 276, 427, 444, 477, 1104, 1493 |
| CaiI | CAGNNNCTG | 2 cut(s) | 617, 1387 |
| CfoI | GCGC | 4 cut(s) | 149, 369, 1081, 1171 |
| Cfr13I | GGNCC | 1 cut(s) | 1419 |
| CseI | GACGC | 6 cut(s) | 140, 188, 332, 407, 478, 815 |
| Csp6I | GTAC | 3 cut(s) | 986, 1161, 1376 |
| CviAII | CATG | 5 cut(s) | 907, 946, 1108, 1339, 1399 |
| CviQI | GTAC | 3 cut(s) | 986, 1161, 1376 |
| DdeI | CTNAG | 1 cut(s) | 537 |
| DinI | GGCGCC | 1 cut(s) | 148 |
| EaeI | YGGCCR | 2 cut(s) | 3, 444 |
| Eam1104I | CTCTTC | 3 cut(s) | 1169, 1320, 1409 |
| EarI | CTCTTC | 3 cut(s) | 1169, 1320, 1409 |
| EciI | GGCGGA | 5 cut(s) | 58, 91, 104, 314, 486 |
| Ecl136II | GAGCTC | 1 cut(s) | 818 |
| Eco130I | CCWWGG | 3 cut(s) | 447, 688, 1311 |
| Eco24I | GRGCYC | 1 cut(s) | 820 |
| Eco32I | GATATC | 1 cut(s) | 1227 |
| Eco53kI | GAGCTC | 1 cut(s) | 818 |
| Eco57I | CTGAAG | 3 cut(s) | 383, 653, 687 |
| Eco88I | CYCGRG | 1 cut(s) | 569 |
| EcoICRI | GAGCTC | 1 cut(s) | 818 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1302 |
| EcoRI | GAATTC | 1 cut(s) | 769 |
| EcoRII | CCWGG | 2 cut(s) | 291, 1036 |
| EcoRV | GATATC | 1 cut(s) | 1227 |
| EcoT14I | CCWWGG | 3 cut(s) | 447, 688, 1311 |
| EcoT22I | ATGCAT | 3 cut(s) | 898, 997, 1018 |
| EcoT38I | GRGCYC | 1 cut(s) | 820 |
| EgeI | GGCGCC | 1 cut(s) | 148 |
| EheI | GGCGCC | 1 cut(s) | 148 |
| ErhI | CCWWGG | 3 cut(s) | 447, 688, 1311 |
| Esp3I | CGTCTC | 1 cut(s) | 89 |
| FaeI | CATG | 5 cut(s) | 910, 949, 1111, 1342, 1402 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1465, 1497 |
| FaqI | GGGAC | 1 cut(s) | 33 |
| FatI | CATG | 5 cut(s) | 906, 945, 1107, 1338, 1398 |
| FauI | CCCGC | 5 cut(s) | 164, 193, 205, 217, 1235 |
| FokI | GGATG | 3 cut(s) | 64, 643, 1343 |
| FriOI | GRGCYC | 1 cut(s) | 820 |
| FspBI | CTAG | 1 cut(s) | 1304 |
| GlaI | GCGC | 4 cut(s) | 148, 368, 1080, 1170 |
| HaeII | RGCGCY | 1 cut(s) | 150 |
| HaeIII | GGCC | 5 cut(s) | 5, 314, 446, 966, 1421 |
| HgaI | GACGC | 6 cut(s) | 140, 188, 332, 407, 478, 815 |
| HhaI | GCGC | 4 cut(s) | 149, 369, 1081, 1171 |
| Hin1I | GRCGYC | 8 cut(s) | 24, 132, 147, 180, 324, 399, 489, 528 |
| Hin1II | CATG | 5 cut(s) | 910, 949, 1111, 1342, 1402 |
| Hin6I | GCGC | 4 cut(s) | 147, 367, 1079, 1169 |
| HinP1I | GCGC | 4 cut(s) | 147, 367, 1079, 1169 |
| HinfI | GANTC | 8 cut(s) | 455, 518, 644, 707, 924, 1031, 1122, 1384 |
| HphI | GGTGA | 2 cut(s) | 5, 1459 |
| Hpy166II | GTNNAC | 3 cut(s) | 589, 622, 986 |
| Hpy188III | TCNNGA | 2 cut(s) | 571, 1046 |
| Hpy8I | GTNNAC | 3 cut(s) | 589, 622, 986 |
| HpyAV | CCTTC | 4 cut(s) | 106, 244, 956, 1045 |
| HpyCH4III | ACNGT | 2 cut(s) | 47, 223 |
| HpyCH4IV | ACGT | 3 cut(s) | 24, 432, 528 |
| HpyCH4V | TGCA | 9 cut(s) | 385, 622, 680, 896, 932, 995, 1016, 1250, 1390 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 150, 476, 481, 542, 628, 677, 815, 987, 1259 |
| HpyF3I | CTNAG | 1 cut(s) | 537 |
| HpySE526I | ACGT | 3 cut(s) | 24, 432, 528 |
| Hsp92I | GRCGYC | 8 cut(s) | 24, 132, 147, 180, 324, 399, 489, 528 |
| Hsp92II | CATG | 5 cut(s) | 910, 949, 1111, 1342, 1402 |
| HspAI | GCGC | 4 cut(s) | 147, 367, 1079, 1169 |
| KasI | GGCGCC | 1 cut(s) | 146 |
| LmnI | GCTCC | 5 cut(s) | 158, 193, 238, 358, 1267 |
| Lsp1109I | GCAGC | 5 cut(s) | 128, 253, 583, 776, 1262 |
| LweI | GCATC | 4 cut(s) | 523, 554, 982, 1003 |
| MaeI | CTAG | 1 cut(s) | 1304 |
| MaeII | ACGT | 3 cut(s) | 24, 432, 528 |
| MaeIII | GTNAC | 3 cut(s) | 11, 328, 661 |
| MbiI | CCGCTC | 3 cut(s) | 188, 419, 502 |
| MflI | RGATCY | 4 cut(s) | 29, 280, 728, 1188 |
| MhlI | GDGCHC | 2 cut(s) | 624, 820 |
| MlsI | TGGCCA | 2 cut(s) | 5, 446 |
| MluNI | TGGCCA | 2 cut(s) | 5, 446 |
| Mly113I | GGCGCC | 1 cut(s) | 147 |
| MlyI | GAGTC | 4 cut(s) | 512, 1025, 1131, 1393 |
| MmeI | TCCRAC | 6 cut(s) | 7, 246, 288, 333, 487, 1428 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 446 |
| Mph1103I | ATGCAT | 3 cut(s) | 898, 997, 1018 |
| MscI | TGGCCA | 2 cut(s) | 5, 446 |
| MseI | TTAA | 7 cut(s) | 122, 765, 891, 938, 1067, 1145, 1472 |
| MslI | CAYNNNNRTG | 2 cut(s) | 911, 1067 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 446 |
| MspA1I | CMGCKG | 2 cut(s) | 141, 1253 |
| MspCI | CTTAAG | 2 cut(s) | 764, 1471 |
| MspR9I | CCNGG | 2 cut(s) | 293, 1038 |
| Mva1269I | GAATGC | 1 cut(s) | 995 |
| MvaI | CCWGG | 2 cut(s) | 293, 1038 |
| MvnI | CGCG | 4 cut(s) | 278, 369, 854, 990 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 150, 476, 481, 542, 628, 677, 815, 987, 1259 |
| NarI | GGCGCC | 1 cut(s) | 147 |
| NlaIII | CATG | 5 cut(s) | 910, 949, 1111, 1342, 1402 |
| NlaIV | GGNNCC | 4 cut(s) | 31, 148, 739, 1309 |
| NmeAIII | GCCGAG | 2 cut(s) | 340, 465 |
| NmuCI | GTSAC | 3 cut(s) | 11, 328, 661 |
| NsiI | ATGCAT | 3 cut(s) | 898, 997, 1018 |
| PaqCI | CACCTGC | 1 cut(s) | 602 |
| PasI | CCCWGGG | 1 cut(s) | 1037 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 174, 513 |
| PctI | GAATGC | 1 cut(s) | 995 |
| PfeI | GAWTC | 4 cut(s) | 455, 644, 707, 924 |
| PflFI | GACNNNGTC | 1 cut(s) | 134 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1271 |
| PleI | GAGTC | 4 cut(s) | 512, 1025, 1130, 1392 |
| PluTI | GGCGCC | 1 cut(s) | 150 |
| PpsI | GAGTC | 4 cut(s) | 512, 1025, 1130, 1392 |
| Psp124BI | GAGCTC | 1 cut(s) | 820 |
| Psp6I | CCWGG | 2 cut(s) | 291, 1036 |
| PspGI | CCWGG | 2 cut(s) | 291, 1036 |
| PspN4I | GGNNCC | 4 cut(s) | 31, 148, 739, 1309 |
| PspPI | GGNCC | 1 cut(s) | 1419 |
| PstI | CTGCAG | 1 cut(s) | 1392 |
| PstNI | CAGNNNCTG | 2 cut(s) | 617, 1387 |
| PsuI | RGATCY | 4 cut(s) | 29, 280, 728, 1188 |
| PsyI | GACNNNGTC | 1 cut(s) | 134 |
| PvuII | CAGCTG | 1 cut(s) | 141 |
| RsaI | GTAC | 3 cut(s) | 987, 1162, 1377 |
| RsaNI | GTAC | 3 cut(s) | 986, 1161, 1376 |
| RseI | CAYNNNNRTG | 2 cut(s) | 911, 1067 |
| SacI | GAGCTC | 1 cut(s) | 820 |
| SaqAI | TTAA | 7 cut(s) | 122, 765, 891, 938, 1067, 1145, 1472 |
| Sau96I | GGNCC | 1 cut(s) | 1419 |
| SchI | GAGTC | 4 cut(s) | 512, 1025, 1131, 1393 |
| ScrFI | CCNGG | 2 cut(s) | 293, 1038 |
| SduI | GDGCHC | 2 cut(s) | 624, 820 |
| SfaNI | GCATC | 4 cut(s) | 523, 554, 982, 1003 |
| SfcI | CTRYAG | 1 cut(s) | 1388 |
| SfoI | GGCGCC | 1 cut(s) | 148 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 911, 1067 |
| SmlI | CTYRAG | 3 cut(s) | 694, 764, 1471 |
| SmoI | CTYRAG | 3 cut(s) | 694, 764, 1471 |
| SspDI | GGCGCC | 1 cut(s) | 146 |
| SspMI | CTAG | 1 cut(s) | 1304 |
| SstI | GAGCTC | 1 cut(s) | 820 |
| StyD4I | CCNGG | 2 cut(s) | 291, 1036 |
| StyI | CCWWGG | 3 cut(s) | 447, 688, 1311 |
| TaaI | ACNGT | 2 cut(s) | 47, 223 |
| TaiI | ACGT | 3 cut(s) | 27, 435, 531 |
| TaqI | TCGA | 7 cut(s) | 42, 129, 390, 516, 531, 1140, 1184 |
| TatI | WGTACW | 2 cut(s) | 1160, 1375 |
| TauI | GCSGC | 7 cut(s) | 107, 120, 147, 299, 422, 425, 502 |
| TfiI | GAWTC | 4 cut(s) | 455, 644, 707, 924 |
| Tru1I | TTAA | 7 cut(s) | 122, 765, 891, 938, 1067, 1145, 1472 |
| Tru9I | TTAA | 7 cut(s) | 122, 765, 891, 938, 1067, 1145, 1472 |
| TscAI | CASTG | 2 cut(s) | 670, 988 |
| TseFI | GTSAC | 3 cut(s) | 11, 328, 661 |
| TseI | GCWGC | 5 cut(s) | 141, 241, 596, 789, 1250 |
| Tsp45I | GTSAC | 3 cut(s) | 11, 328, 661 |
| TspDTI | ATGAA | 1 cut(s) | 1269 |
| TspGWI | ACGGA | 2 cut(s) | 649, 1434 |
| TspRI | CASTG | 2 cut(s) | 670, 988 |
| Tth111I | GACNNNGTC | 1 cut(s) | 134 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1271 |
| Vha464I | CTTAAG | 2 cut(s) | 764, 1471 |
| VneI | GTGCAC | 1 cut(s) | 620 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1302 |
| XapI | RAATTY | 1 cut(s) | 769 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 340, 1318 |
| XspI | CTAG | 1 cut(s) | 1304 |
| ZraI | GACGTC | 2 cut(s) | 25, 529 |
| Zsp2I | ATGCAT | 3 cut(s) | 898, 997, 1018 |