Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0009437

Physical Location & Seq

Genomic Coordinates Reverse (-)

4643211 .. 4646362

Gene Structure 3152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1057900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGGCCAAGTGTCACCGAAACGACGTCGGATCCGTAGTCCTAGACCGCCCCAACACCACCTCCTCCGGCCATTTCTGGCTCTGGTCGTCCTTCTCCGGCGCCTCATTCCGTCGGAAAATCTTCCACGCCGTCAGTTGCGGCGGCAGCTCCCGCTACCGCCACCACGACAATGATGACGAGGCCGCTCCGATCAGTCCTCCGACTCCTTCGGCCACCGGAGTCACCACCATCAGATCAATCACAACCAAAACCACGACGACGCAGTCGCAGACGAATGTTAAAGAGGCGGAGAAGGCTGTGAAGCCGAAAGCGAAGTCCGAGAAGCTCTCGGATCTTCTGAACCTCGCGGAGTTTTCGGAAGCGGAAAACGACGCCGCGACGAAGGAGAAGGTGGAGGCGCTGGAGGAGCTGAAGCGCGTGGCGAAGGACCTGCAGGCGGAAGATGACTCGGCGAAGAGGAAAGAGGCGGCGAGCAAGGTTAGATTGCTCGCCAAGGAAGACTCGGAAGCCAGAGCCACGCTCGCGATGCTCGGCGTCATTCCTCCGCTCGTCGCCTTGCTCGACTCCGACGACGCCGTTTCCCAGATCGCGTCGCTCTACGCTCTGCTCAATCTCGGGATCGGCAACGACGTGAACAAGGCTGCTATTCTCCAAGCAGGGGCAGTGCACAATATGCTGAAGCTAATTGAATCCCCAAACCCTCCAGACCCATCAGTTTCAGAAGCTATCATTGCGAATTTCCTCGGCTTAAGCGCGTTGGACTCAAATAAACCGATCATTGGAGCTTCGGGCGCCATACCCTTCTTGGTTCAAACCCTCAAGAATTCGGACAATGCAAGCAGCTGCCAAGCCAAGCAAGACGCCTTGAGAGCGCTGTATAATCTGTCAATCTTCCCATCCAATATTTCGTTCATATTGGAAACAGATTTGATCCCGTTTTTCTTGAATTCGCTCGGAGACATGGAAGTGAGCGAAAGAATCCTTGCAATTCTAAGCAACGTGGTGTCTGTCCCGGAAGGCCGAAAGGCAATTAGCAGTGTGAAGGATGCATTTCCAATATTGGTTGATGCATTGAACTGGAATGACTCGCCGGGGTGCCAAGAGAAGGCGTCGTACATTCTGATGGTAATGGCACACAAGGCGTTTGGGGATAGGCAAGCCATGATCGAGGCAGGAATGGTTTCGGCATTGCTCGAGTTGACGCTTTTGGGGAGTACGTTGGCGCAGAAGAGAGCCTCAAGGATCTTGGAGTGTTTGAGAGTAGATAAAGGAAAGCAGGTTTCGCAGAGCTTCAGCGGGAGGAGTATGGGGGCAGCGGTCTCCGCTCCCATTTGTGGGTCTTCATCGTCTTCTTCAAACCCGAATGTGGGTTCCAAGGAGTGCATGGAGGACGAGGAGGACACGATGAGTGAGGAGAAGAAAGCCGTGAAGCAATTAATCCAACAGAGTTTGCAAAACAACATGAGAAGGATCGTGAAGCGGGCGAATTTGCCGCAAGATTTCGTCCCCTCAGATCATTTCAAGTCGCTCACCTCGAGTTCAACCTCGAAGAGCTTGCCGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

522

Amino Acids

56.05

Weight (kDa)

6.3

Isoelectric Point (pI)

55.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	114 - 325	2.1e-11	ARMC5
ARM_PUB	PF25598	137 - 407	6.5e-11	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31890 AT4G31890 AT4G31890
fragaria_vesca	FvH4_2g40980 FvH4_2g40980
malus_domestica	MD08G1057900.v1.1 MD15G1038300.v1.1
prunus_persica	Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1
pyrus_communis	pycom08g04810 pycom15g03580
rosa_chinensis	RchiOBHm_Chr6g0299591
rosa_laevigata	RLG00000011407
rosa_multiflora	Rmu_sc0024600.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168530
rosa_rugosa	Rorug06G0290600 Rorug06G0290700
rosa_samantha	Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800
rosa_wichuraiana	Rw6G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	262
AatII	GACGTC	1 cut(s)	27
Acc36I	ACCTGC	2 cut(s)	438, 1267
AccB1I	GGYRCC	3 cut(s)	98, 791, 1095
AccBSI	CCGCTC	3 cut(s)	185, 547, 1325
AccII	CGCG	6 cut(s)	347, 377, 417, 524, 590, 755
AclWI	GGATC	7 cut(s)	24, 37, 339, 626, 925, 1250, 1478
AcoI	YGGCCR	3 cut(s)	3, 67, 210
AcsI	RAATTY	4 cut(s)	736, 823, 946, 1486
AcuI	CTGAAG	3 cut(s)	431, 698, 1276
AcyI	GRCGYC	8 cut(s)	24, 99, 372, 534, 573, 792, 861, 1109
AfaI	GTAC	2 cut(s)	1115, 1216
AfeI	AGCGCT	1 cut(s)	873
AfiI	CCNNNNNNNGG	8 cut(s)	436, 658, 779, 1105, 1334, 1335, 1366, 1367
AflII	CTTAAG	1 cut(s)	748
AgsI	TTSAA	7 cut(s)	689, 812, 946, 1075, 1356, 1522, 1542
AjiI	CACGTC	1 cut(s)	631
AjuI	GAANNNNNNNTTGG	2 cut(s)	893, 925
AluBI	AGCT	9 cut(s)	147, 325, 409, 682, 725, 785, 843, 1290, 1554
AluI	AGCT	9 cut(s)	147, 325, 409, 682, 725, 785, 843, 1290, 1554
Alw21I	GWGCWC	1 cut(s)	669
Alw26I	GTCTC	2 cut(s)	951, 1324
Alw44I	GTGCAC	1 cut(s)	665
AlwI	GGATC	7 cut(s)	24, 37, 339, 626, 925, 1250, 1478
Ama87I	CYCGRG	3 cut(s)	614, 1193, 1534
Aor51HI	AGCGCT	1 cut(s)	873
AoxI	GGCC	5 cut(s)	3, 67, 180, 210, 1018
ApaLI	GTGCAC	1 cut(s)	665
ApeKI	GCWGC	5 cut(s)	144, 641, 840, 843, 1313
ApoI	RAATTY	4 cut(s)	736, 823, 946, 1486
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AseI	ATTAAT	1 cut(s)	1436
Asp700I	GAANNNNTTC	2 cut(s)	119, 1180
AspLEI	GCGC	7 cut(s)	101, 400, 417, 755, 794, 874, 1225
AspS9I	GGNCC	1 cut(s)	427
AsuC2I	CCSGG	2 cut(s)	1013, 1092
AsuHPI	GGTGA	3 cut(s)	5, 214, 1522
AvaI	CYCGRG	3 cut(s)	614, 1193, 1534
AvaII	GGWCC	1 cut(s)	427
BaeGI	GKGCMC	1 cut(s)	669
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	29
BanI	GGYRCC	3 cut(s)	98, 791, 1095
BarI	GAAGNNNNNNTAC	2 cut(s)	1097, 1129
BbsI	GAAGAC	3 cut(s)	504, 1332, 1341
Bbv12I	GWGCWC	1 cut(s)	669
BbvI	GCAGC	5 cut(s)	156, 628, 830, 852, 1325
BccI	CCATC	4 cut(s)	236, 718, 904, 1117
BceAI	ACGGC	4 cut(s)	113, 560, 1409, 1543
BcgI	CGANNNNNNTGC	3 cut(s)	412, 446, 1537
BcnI	CCSGG	2 cut(s)	1013, 1092
BcoDI	GTCTC	2 cut(s)	951, 1324
BfaI	CTAG	1 cut(s)	41
BfmI	CTRYAG	1 cut(s)	431
BfoI	RGCGCY	4 cut(s)	102, 401, 795, 875
BfrI	CTTAAG	1 cut(s)	748
BfuAI	ACCTGC	2 cut(s)	438, 1267
Bme1390I	CCNGG	2 cut(s)	1013, 1092
Bme18I	GGWCC	1 cut(s)	427
BmeT110I	CYCGRG	3 cut(s)	614, 1193, 1534
BmgBI	CACGTC	1 cut(s)	631
BmgT120I	GGNCC	1 cut(s)	427
BmiI	GGNNCC	5 cut(s)	31, 100, 793, 1097, 1372
BmrFI	CCNGG	2 cut(s)	1013, 1092
BmsI	GCATC	3 cut(s)	516, 1036, 1057
BpiI	GAAGAC	3 cut(s)	504, 1332, 1341
BplI	GAGNNNNNCTC	4 cut(s)	311, 343, 504, 536
BpmI	CTGGAG	2 cut(s)	422, 687
BpuEI	CTTGAG	3 cut(s)	803, 886, 1222
BpuMI	CCSGG	2 cut(s)	1013, 1092
BsaHI	GRCGYC	8 cut(s)	24, 99, 372, 534, 573, 792, 861, 1109
BsaI	GGTCTC	1 cut(s)	1324
BsaJI	CCNNGG	4 cut(s)	492, 742, 1091, 1374
BsaWI	WCCGGW	1 cut(s)	215
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	8 cut(s)	436, 658, 779, 1105, 1334, 1335, 1366, 1367
Bse1I	ACTGG	1 cut(s)	1082
Bse3DI	GCAATG	2 cut(s)	729, 1187
BseDI	CCNNGG	4 cut(s)	492, 742, 1091, 1374
BseGI	GGATG	2 cut(s)	896, 1051
BseLI	CCNNNNNNNGG	8 cut(s)	436, 658, 779, 1105, 1334, 1335, 1366, 1367
BseMI	GCAATG	2 cut(s)	729, 1187
BseMII	CTCAG	1 cut(s)	1524
BseNI	ACTGG	1 cut(s)	1082
BseRI	GAGGAG	5 cut(s)	52, 419, 1315, 1409, 1427
BseSI	GKGCMC	1 cut(s)	669
BseXI	GCAGC	5 cut(s)	156, 628, 830, 852, 1325
Bsh1236I	CGCG	6 cut(s)	347, 377, 417, 524, 590, 755
BshFI	GGCC	5 cut(s)	5, 69, 182, 212, 1020
BshNI	GGYRCC	3 cut(s)	98, 791, 1095
BsiHKAI	GWGCWC	1 cut(s)	669
BsiHKCI	CYCGRG	3 cut(s)	614, 1193, 1534
BsiSI	CCGG	5 cut(s)	66, 96, 216, 1013, 1091
BslFI	GGGAC	2 cut(s)	995, 1490
BslI	CCNNNNNNNGG	8 cut(s)	436, 658, 779, 1105, 1334, 1335, 1366, 1367
BsmAI	GTCTC	2 cut(s)	951, 1324
BsmFI	GGGAC	2 cut(s)	995, 1490
BsnI	GGCC	5 cut(s)	5, 69, 182, 212, 1020
Bso31I	GGTCTC	1 cut(s)	1324
BsoBI	CYCGRG	3 cut(s)	614, 1193, 1534
Bsp1286I	GDGCHC	1 cut(s)	669
Bsp68I	TCGCGA	1 cut(s)	524
BspANI	GGCC	5 cut(s)	5, 69, 182, 212, 1020
BspCNI	CTCAG	1 cut(s)	1523
BspFNI	CGCG	6 cut(s)	347, 377, 417, 524, 590, 755
BspLI	GGNNCC	5 cut(s)	31, 100, 793, 1097, 1372
BspMAI	CTGCAG	1 cut(s)	435
BspMI	ACCTGC	2 cut(s)	438, 1267
BspPI	GGATC	7 cut(s)	24, 37, 339, 626, 925, 1250, 1478
BspQI	GCTCTTC	1 cut(s)	1544
BspT107I	GGYRCC	3 cut(s)	98, 791, 1095
BspTI	CTTAAG	1 cut(s)	748
BspTNI	GGTCTC	1 cut(s)	1324
BsrBI	CCGCTC	3 cut(s)	185, 547, 1325
BsrDI	GCAATG	2 cut(s)	729, 1187
BsrI	ACTGG	1 cut(s)	1082
BssECI	CCNNGG	4 cut(s)	492, 742, 1091, 1374
BssNI	GRCGYC	8 cut(s)	24, 99, 372, 534, 573, 792, 861, 1109
BssT1I	CCWWGG	2 cut(s)	492, 1374
Bst6I	CTCTTC	3 cut(s)	449, 1223, 1544
BstACI	GRCGYC	8 cut(s)	24, 99, 372, 534, 573, 792, 861, 1109
BstAFI	CTTAAG	1 cut(s)	748
BstAPI	GCANNNNNTGC	1 cut(s)	673
BstC8I	GCNNGC	8 cut(s)	435, 472, 489, 522, 838, 1158, 1482, 1556
BstDEI	CTNAG	2 cut(s)	992, 1510
BstF5I	GGATG	2 cut(s)	896, 1051
BstFNI	CGCG	6 cut(s)	347, 377, 417, 524, 590, 755
BstH2I	RGCGCY	4 cut(s)	102, 401, 795, 875
BstHHI	GCGC	7 cut(s)	101, 400, 417, 755, 794, 874, 1225
BstMAI	GTCTC	2 cut(s)	951, 1324
BstSCI	CCNGG	2 cut(s)	1011, 1090
BstSFI	CTRYAG	1 cut(s)	431
BstSLI	GKGCMC	1 cut(s)	669
BstUI	CGCG	6 cut(s)	347, 377, 417, 524, 590, 755
BstV1I	GCAGC	5 cut(s)	156, 628, 830, 852, 1325
BstV2I	GAAGAC	3 cut(s)	504, 1332, 1341
BstX2I	RGATCY	3 cut(s)	29, 331, 1242
BstYI	RGATCY	3 cut(s)	29, 331, 1242
BsuRI	GGCC	5 cut(s)	5, 69, 182, 212, 1020
BtgZI	GCGATG	1 cut(s)	539
BtrI	CACGTC	1 cut(s)	631
BtsCI	GGATG	2 cut(s)	896, 1051
BtsI	GCAGTG	2 cut(s)	669, 1042
BtsIMutI	CAGTG	2 cut(s)	669, 1042
BtuMI	TCGCGA	1 cut(s)	524
BveI	ACCTGC	2 cut(s)	438, 1267
Cac8I	GCNNGC	8 cut(s)	435, 472, 489, 522, 838, 1158, 1482, 1556
CfoI	GCGC	7 cut(s)	101, 400, 417, 755, 794, 874, 1225
Cfr13I	GGNCC	1 cut(s)	427
CseI	GACGC	8 cut(s)	268, 380, 523, 579, 581, 869, 1098, 1210
Csp6I	GTAC	2 cut(s)	1114, 1215
CviAII	CATG	4 cut(s)	961, 1162, 1384, 1462
CviQI	GTAC	2 cut(s)	1114, 1215
DdeI	CTNAG	2 cut(s)	992, 1510
DinI	GGCGCC	2 cut(s)	100, 793
DrdI	GACNNNNNNGTC	1 cut(s)	262
DseDI	GACNNNNNNGTC	1 cut(s)	262
EaeI	YGGCCR	3 cut(s)	3, 67, 210
Eam1104I	CTCTTC	3 cut(s)	449, 1223, 1544
EarI	CTCTTC	3 cut(s)	449, 1223, 1544
EciI	GGCGGA	2 cut(s)	302, 452
Eco130I	CCWWGG	2 cut(s)	492, 1374
Eco31I	GGTCTC	1 cut(s)	1324
Eco47I	GGWCC	1 cut(s)	427
Eco47III	AGCGCT	1 cut(s)	873
Eco57I	CTGAAG	3 cut(s)	431, 698, 1276
Eco88I	CYCGRG	3 cut(s)	614, 1193, 1534
EcoO109I	RGGNCCY	1 cut(s)	427
EcoRI	GAATTC	2 cut(s)	823, 946
EcoT14I	CCWWGG	2 cut(s)	492, 1374
EcoT22I	ATGCAT	2 cut(s)	1051, 1072
EgeI	GGCGCC	2 cut(s)	100, 793
EheI	GGCGCC	2 cut(s)	100, 793
ErhI	CCWWGG	2 cut(s)	492, 1374
FaeI	CATG	4 cut(s)	964, 1165, 1387, 1465
FaiI	YATR	9 cut(s)	674, 797, 879, 914, 962, 1163, 1307, 1385, 1463
FaqI	GGGAC	2 cut(s)	995, 1490
FatI	CATG	4 cut(s)	960, 1161, 1383, 1461
FauI	CCCGC	3 cut(s)	158, 1289, 1473
FokI	GGATG	2 cut(s)	883, 1058
FspBI	CTAG	1 cut(s)	41
GlaI	GCGC	7 cut(s)	100, 399, 416, 754, 793, 873, 1224
GsuI	CTGGAG	2 cut(s)	422, 687
HaeII	RGCGCY	4 cut(s)	102, 401, 795, 875
HaeIII	GGCC	5 cut(s)	5, 69, 182, 212, 1020
HapII	CCGG	5 cut(s)	66, 96, 216, 1013, 1091
HgaI	GACGC	8 cut(s)	268, 380, 523, 579, 581, 869, 1098, 1210
HhaI	GCGC	7 cut(s)	101, 400, 417, 755, 794, 874, 1225
Hin1I	GRCGYC	8 cut(s)	24, 99, 372, 534, 573, 792, 861, 1109
Hin1II	CATG	4 cut(s)	964, 1165, 1387, 1465
Hin6I	GCGC	7 cut(s)	99, 398, 415, 753, 792, 872, 1223
HinP1I	GCGC	7 cut(s)	99, 398, 415, 753, 792, 872, 1223
HincII	GTYRAC	1 cut(s)	1200
HindII	GTYRAC	1 cut(s)	1200
HinfI	GANTC	9 cut(s)	202, 219, 446, 500, 563, 689, 761, 978, 1085
HpaII	CCGG	5 cut(s)	66, 96, 216, 1013, 1091
HphI	GGTGA	3 cut(s)	5, 214, 1522
Hpy166II	GTNNAC	3 cut(s)	634, 667, 1200
Hpy188III	TCNNGA	6 cut(s)	523, 616, 704, 820, 943, 1474
Hpy8I	GTNNAC	3 cut(s)	634, 667, 1200
HpyCH4IV	ACGT	4 cut(s)	24, 630, 999, 1217
HpyCH4V	TGCA	8 cut(s)	433, 667, 836, 986, 1049, 1070, 1383, 1453
HpyF3I	CTNAG	2 cut(s)	992, 1510
HpySE526I	ACGT	4 cut(s)	24, 630, 999, 1217
Hsp92I	GRCGYC	8 cut(s)	24, 99, 372, 534, 573, 792, 861, 1109
Hsp92II	CATG	4 cut(s)	964, 1165, 1387, 1465
HspAI	GCGC	7 cut(s)	99, 398, 415, 753, 792, 872, 1223
KasI	GGCGCC	2 cut(s)	98, 791
LguI	GCTCTTC	1 cut(s)	1544
LmnI	GCTCC	5 cut(s)	152, 190, 406, 782, 1330
Lsp1109I	GCAGC	5 cut(s)	156, 628, 830, 852, 1325
LweI	GCATC	3 cut(s)	516, 1036, 1057
MaeI	CTAG	1 cut(s)	41
MaeII	ACGT	4 cut(s)	24, 630, 999, 1217
MaeIII	GTNAC	2 cut(s)	11, 220
MbiI	CCGCTC	3 cut(s)	185, 547, 1325
MflI	RGATCY	3 cut(s)	29, 331, 1242
MhlI	GDGCHC	1 cut(s)	669
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	684, 736, 823, 946, 987, 1029, 1433, 1486
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	2 cut(s)	99, 792
MlyI	GAGTC	7 cut(s)	196, 228, 440, 494, 557, 755, 1079
MmeI	TCCRAC	6 cut(s)	7, 92, 224, 591, 738, 1465
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	1051, 1072
MroXI	GAANNNNTTC	2 cut(s)	119, 1180
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	279, 749, 1436
MslI	CAYNNNNRTG	3 cut(s)	168, 965, 1121
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	843, 1296, 1316
MspCI	CTTAAG	1 cut(s)	748
MspI	CCGG	5 cut(s)	66, 96, 216, 1013, 1091
MspR9I	CCNGG	2 cut(s)	1013, 1092
MvnI	CGCG	6 cut(s)	347, 377, 417, 524, 590, 755
NarI	GGCGCC	2 cut(s)	99, 792
NciI	CCSGG	2 cut(s)	1013, 1092
NlaIII	CATG	4 cut(s)	964, 1165, 1387, 1465
NlaIV	GGNNCC	5 cut(s)	31, 100, 793, 1097, 1372
NmeAIII	GCCGAG	3 cut(s)	428, 510, 723
NmuCI	GTSAC	2 cut(s)	11, 220
NruI	TCGCGA	1 cut(s)	524
NsiI	ATGCAT	2 cut(s)	1051, 1072
PaeR7I	CTCGAG	2 cut(s)	1193, 1534
PciSI	GCTCTTC	1 cut(s)	1544
PcsI	WCGNNNNNNNCGW	5 cut(s)	30, 558, 567, 627, 1532
PdmI	GAANNNNTTC	2 cut(s)	119, 1180
PfeI	GAWTC	2 cut(s)	689, 978
PflFI	GACNNNGTC	1 cut(s)	262
PfoI	TCCNGGA	1 cut(s)	1011
PleI	GAGTC	7 cut(s)	196, 227, 440, 494, 557, 755, 1079
PluTI	GGCGCC	2 cut(s)	102, 795
PpsI	GAGTC	7 cut(s)	196, 227, 440, 494, 557, 755, 1079
PpuMI	RGGWCCY	1 cut(s)	427
PshBI	ATTAAT	1 cut(s)	1436
Psp5II	RGGWCCY	1 cut(s)	427
PspN4I	GGNNCC	5 cut(s)	31, 100, 793, 1097, 1372
PspPI	GGNCC	1 cut(s)	427
PspPPI	RGGWCCY	1 cut(s)	427
PspXI	VCTCGAGB	2 cut(s)	1193, 1534
PstI	CTGCAG	1 cut(s)	435
PsuI	RGATCY	3 cut(s)	29, 331, 1242
PsyI	GACNNNGTC	1 cut(s)	262
PvuII	CAGCTG	1 cut(s)	843
RruI	TCGCGA	1 cut(s)	524
RsaI	GTAC	2 cut(s)	1115, 1216
RsaNI	GTAC	2 cut(s)	1114, 1215
RseI	CAYNNNNRTG	3 cut(s)	168, 965, 1121
SapI	GCTCTTC	1 cut(s)	1544
SaqAI	TTAA	3 cut(s)	279, 749, 1436
Sau96I	GGNCC	1 cut(s)	427
SbfI	CCTGCAGG	1 cut(s)	435
SchI	GAGTC	7 cut(s)	196, 228, 440, 494, 557, 755, 1079
ScrFI	CCNGG	2 cut(s)	1013, 1092
SdaI	CCTGCAGG	1 cut(s)	435
SduI	GDGCHC	1 cut(s)	669
SfaNI	GCATC	3 cut(s)	516, 1036, 1057
SfcI	CTRYAG	1 cut(s)	431
SfoI	GGCGCC	2 cut(s)	100, 793
Sfr274I	CTCGAG	2 cut(s)	1193, 1534
SinI	GGWCC	1 cut(s)	427
SlaI	CTCGAG	2 cut(s)	1193, 1534
SmiMI	CAYNNNNRTG	3 cut(s)	168, 965, 1121
SmlI	CTYRAG	6 cut(s)	748, 818, 865, 1193, 1237, 1534
SmoI	CTYRAG	6 cut(s)	748, 818, 865, 1193, 1237, 1534
Sse8387I	CCTGCAGG	1 cut(s)	435
Sse9I	AATT	8 cut(s)	684, 736, 823, 946, 987, 1029, 1433, 1486
SspDI	GGCGCC	2 cut(s)	98, 791
SspI	AATATT	2 cut(s)	904, 1059
SspMI	CTAG	1 cut(s)	41
StyD4I	CCNGG	2 cut(s)	1011, 1090
StyI	CCWWGG	2 cut(s)	492, 1374
TaiI	ACGT	4 cut(s)	27, 633, 1002, 1220
TaqI	TCGA	5 cut(s)	561, 1167, 1194, 1535, 1547
TasI	AATT	8 cut(s)	684, 736, 823, 946, 987, 1029, 1433, 1486
TauI	GCSGC	6 cut(s)	141, 144, 185, 377, 470, 1495
TfiI	GAWTC	2 cut(s)	689, 978
Tru1I	TTAA	3 cut(s)	279, 749, 1436
Tru9I	TTAA	3 cut(s)	279, 749, 1436
TscAI	CASTG	2 cut(s)	669, 1042
TseFI	GTSAC	2 cut(s)	11, 220
TseI	GCWGC	5 cut(s)	144, 641, 840, 843, 1313
Tsp45I	GTSAC	2 cut(s)	11, 220
TspDTI	ATGAA	2 cut(s)	901, 1332
TspGWI	ACGGA	2 cut(s)	22, 98
TspRI	CASTG	2 cut(s)	669, 1042
Tth111I	GACNNNGTC	1 cut(s)	262
Vha464I	CTTAAG	1 cut(s)	748
VneI	GTGCAC	1 cut(s)	665
VpaK11BI	GGWCC	1 cut(s)	427
VspI	ATTAAT	1 cut(s)	1436
XapI	RAATTY	4 cut(s)	736, 823, 946, 1486
XcmI	CCANNNNNNNNNTGG	2 cut(s)	802, 1381
XhoI	CTCGAG	2 cut(s)	1193, 1534
XmnI	GAANNNNTTC	2 cut(s)	119, 1180
XspI	CTAG	1 cut(s)	41
ZraI	GACGTC	1 cut(s)	25
Zsp2I	ATGCAT	2 cut(s)	1051, 1072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.