Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009437

Physical Location & Seq

Genomic Coordinates Reverse (-)

60678643 .. 60682030

Gene Structure 3388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26900

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGCCAAGTGTCACCGCAACGACGTCGGATCTATTGTCCTAGACCGTCCCTCCACCACCGCCACCGCCCACTCCCGCCTCTGGTCTTCCTTCTCCGCCGCCTCATTCCGCCGCTTAATCTTCGACGCCGTCAGCTGCGGCGCCAGCTCCCGCTACCGCCACCGACACGAAACCGACGCCGCCGCCCCTCCCGCCAGTCCTCCCGCCGGATCAACCCTCAAGCAATCCGAAGAGCCGGAGAAGGCAAAGCCGAAACCCAAGTCCGAGAAGCTCTCGGATCTTCTGAACCTGGCGGCGGAATGGTCGGAGGCCGAGAGCGACGCGGTGACCAAGAAGAAAGTGGAGTCATTGGAGGAGCTGAAGCGCGTGGCCAGGGAGTTGCAGGTCGAAAACGACGCCGTCGAGAAGCGGAGAGAGGCGGCCAGCCACGTCAGACTTATGGCCAAGGAAGACTCCGAAGCGAGAGCCACGCTTGCGATGCTCGGCGTCATTCCGCCGCTCGTCGGAATGCTCGACGACTCCGATGACGTCGATGCTCAGATCGCATCACTCTATGCTCTGCTCAATCTCGGCATCGGCAACGATGTGAACAAAGCTGCTATCCTCCAAGCAGGTGCTGTGCACAAAATGCTGAAGCTGATTGAATCTCCAAACTCATCAGTCTCCGAAGCAATAATTGCAAATTTCCTTGGCTTAAGTGCTTTGGATTCTAATAAACCCATTATTGGATCATCAGGTGCCATACCTTTCTTGCTTAAAATCCTCAAGAGTTTGGACAACACAATTAGCAGCCAAGCTAAGCAAGACGCCTTGAGGGCTCTGTACAATCTTTCAATCTTCCCATCCAATGTTTCCTATATACTGGAAACCGATATGATCCCATTTTTCTTTAATGCACTGGGTGACATGGAAATGAGTGAAAGAATCCTTGCAATTCTAAGCAATATGGTATCTACTCCTGAAGGCCGAAAAGCAATCAGCAGTGTGCGCGATGCATTCCCTGTATTGGTTGATGCATTGAATTGGAACGACTCCCCCGGGTGTCAAGAGAAAGCATCCTACATTTTAATGGTAATGGCGCACAAGGCGTTTGGGGATAGGCAAGCCATGATTGAGGCAGGAGTGGTATCAGCGTTGCTCGAATTAACGCTTTTGGGTAGTACATTGGCGCAGAAGAGAGCTTCGAGGATCTTGGAGTGTTTGAGAGTGGACAAAGGAAAACAGATCTCACAGAACTTTGGCGGGAGTGGAGCGGTTTCTGCTCCAATTTGTGGGTCTTCATCATCTTCTACAAACCCTAATCTAGGTTCCAAGGAGTGTTTGGAAGAGGATGAGGACATGATGAGTAATGAGAGGAAAGCAGTAAAGCAATTAGTACAACAGAGTTTGCAGAGCAACATGAGGAGGATTGTGAAGAGAGCCAATTTGCCCCAAGACTTTGTTCCGTCAGATCATTTCAAGTCACTCATCTCAAGTTCAACTTCAAAGAGCTTGCCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

500

Amino Acids

54.12

Weight (kDa)

6.49

Isoelectric Point (pI)

58.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	130 - 312	2.3e-11	ARMC5
ARM_PUB	PF25598	253 - 390	6.1e-09	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31890 AT4G31890 AT4G31890
fragaria_vesca	FvH4_2g40980 FvH4_2g40980
malus_domestica	MD08G1057900.v1.1 MD15G1038300.v1.1
prunus_persica	Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1
pyrus_communis	pycom08g04810 pycom15g03580
rosa_chinensis	RchiOBHm_Chr6g0299591
rosa_laevigata	RLG00000011407
rosa_multiflora	Rmu_sc0024600.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168530
rosa_rugosa	Rorug06G0290600 Rorug06G0290700
rosa_samantha	Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800
rosa_wichuraiana	Rw6G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	602
AatII	GACGTC	2 cut(s)	27, 531
Acc36I	ACCTGC	2 cut(s)	373, 602
AccB1I	GGYRCC	2 cut(s)	140, 737
AccB7I	CCANNNNNTGG	1 cut(s)	1271
AccBSI	CCGCTC	2 cut(s)	499, 1253
AccII	CGCG	3 cut(s)	323, 366, 990
AclWI	GGATC	6 cut(s)	37, 217, 285, 736, 871, 1196
AcoI	YGGCCR	4 cut(s)	3, 369, 420, 441
AcsI	RAATTY	1 cut(s)	682
AcuI	CTGAAG	3 cut(s)	380, 653, 981
AcyI	GRCGYC	8 cut(s)	24, 126, 141, 177, 396, 486, 528, 807
AdeI	CACNNNGTG	1 cut(s)	902
AfaI	GTAC	3 cut(s)	824, 1162, 1377
AfiI	CCNNNNNNNGG	8 cut(s)	81, 206, 295, 503, 725, 1006, 1271, 1304
AflII	CTTAAG	1 cut(s)	694
AgsI	TTSAA	6 cut(s)	644, 834, 1021, 1459, 1479, 1485
AjiI	CACGTC	1 cut(s)	430
AjnI	CCWGG	2 cut(s)	288, 371
AjuI	GAANNNNNNNTTGG	2 cut(s)	1425, 1457
AluBI	AGCT	9 cut(s)	135, 147, 271, 358, 596, 637, 797, 1181, 1491
AluI	AGCT	9 cut(s)	135, 147, 271, 358, 596, 637, 797, 1181, 1491
Alw21I	GWGCWC	1 cut(s)	624
Alw26I	GTCTC	1 cut(s)	667
Alw44I	GTGCAC	1 cut(s)	620
AlwI	GGATC	6 cut(s)	37, 217, 285, 736, 871, 1196
AlwNI	CAGNNNCTG	1 cut(s)	617
Ama87I	CYCGRG	1 cut(s)	1037
AoxI	GGCC	6 cut(s)	3, 309, 369, 420, 441, 964
ApaLI	GTGCAC	1 cut(s)	620
ApeKI	GCWGC	3 cut(s)	135, 596, 789
ApoI	RAATTY	1 cut(s)	682
ArsI	GACNNNNNNTTYG	2 cut(s)	245, 277
AspLEI	GCGC	5 cut(s)	143, 366, 990, 1081, 1171
AsuC2I	CCSGG	2 cut(s)	1038, 1039
AsuHPI	GGTGA	3 cut(s)	5, 337, 914
AvaI	CYCGRG	1 cut(s)	1037
BaeGI	GKGCMC	1 cut(s)	624
BalI	TGGCCA	3 cut(s)	5, 371, 443
BanI	GGYRCC	2 cut(s)	140, 737
BanII	GRGCYC	1 cut(s)	820
BbsI	GAAGAC	3 cut(s)	78, 456, 1269
Bbv12I	GWGCWC	1 cut(s)	624
BbvI	GCAGC	3 cut(s)	122, 583, 801
BccI	CCATC	1 cut(s)	850
BceAI	ACGGC	2 cut(s)	113, 383
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	2 cut(s)	290, 373
BcnI	CCSGG	2 cut(s)	1038, 1039
BcoDI	GTCTC	1 cut(s)	667
BfaI	CTAG	2 cut(s)	41, 1304
BfoI	RGCGCY	1 cut(s)	144
BfrI	CTTAAG	1 cut(s)	694
BfuAI	ACCTGC	2 cut(s)	373, 602
BglI	GCCNNNNNGGC	1 cut(s)	815
BglII	AGATCT	1 cut(s)	1224
BlpI	GCTNAGC	1 cut(s)	798
Bme1390I	CCNGG	4 cut(s)	290, 373, 1038, 1039
BmeT110I	CYCGRG	1 cut(s)	1037
BmgBI	CACGTC	1 cut(s)	430
BmiI	GGNNCC	3 cut(s)	142, 739, 1309
BmrFI	CCNGG	4 cut(s)	290, 373, 1038, 1039
BmrI	ACTGGG	1 cut(s)	908
BmsI	GCATC	7 cut(s)	468, 523, 554, 582, 982, 1003, 1064
BmuI	ACTGGG	1 cut(s)	908
BpiI	GAAGAC	3 cut(s)	78, 456, 1269
BplI	GAGNNNNNCTC	2 cut(s)	257, 289
Bpu1102I	GCTNAGC	1 cut(s)	798
BpuEI	CTTGAG	4 cut(s)	203, 749, 832, 1456
BpuMI	CCSGG	2 cut(s)	1038, 1039
BsaHI	GRCGYC	8 cut(s)	24, 126, 141, 177, 396, 486, 528, 807
BsaJI	CCNNGG	6 cut(s)	372, 444, 688, 1036, 1037, 1311
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	8 cut(s)	81, 206, 295, 503, 725, 1006, 1271, 1304
Bse1I	ACTGG	3 cut(s)	195, 867, 903
BseBI	CCWGG	2 cut(s)	290, 373
BseDI	CCNNGG	6 cut(s)	372, 444, 688, 1036, 1037, 1311
BseGI	GGATG	3 cut(s)	842, 1055, 1336
BseLI	CCNNNNNNNGG	8 cut(s)	81, 206, 295, 503, 725, 1006, 1271, 1304
BseMII	CTCAG	1 cut(s)	551
BseNI	ACTGG	3 cut(s)	195, 867, 903
BseRI	GAGGAG	2 cut(s)	368, 1417
BseSI	GKGCMC	1 cut(s)	624
BseXI	GCAGC	3 cut(s)	122, 583, 801
Bsh1236I	CGCG	3 cut(s)	323, 366, 990
BshFI	GGCC	6 cut(s)	5, 311, 371, 422, 443, 966
BshNI	GGYRCC	2 cut(s)	140, 737
BsiHKAI	GWGCWC	1 cut(s)	624
BsiHKCI	CYCGRG	1 cut(s)	1037
BsiSI	CCGG	3 cut(s)	207, 236, 1038
BslFI	GGGAC	1 cut(s)	33
BslI	CCNNNNNNNGG	8 cut(s)	81, 206, 295, 503, 725, 1006, 1271, 1304
BsmAI	GTCTC	1 cut(s)	667
BsmFI	GGGAC	1 cut(s)	33
BsmI	GAATGC	2 cut(s)	513, 995
BsnI	GGCC	6 cut(s)	5, 311, 371, 422, 443, 966
BsoBI	CYCGRG	1 cut(s)	1037
Bsp1286I	GDGCHC	2 cut(s)	624, 820
Bsp1407I	TGTACA	1 cut(s)	822
Bsp143I	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
Bsp1720I	GCTNAGC	1 cut(s)	798
BspANI	GGCC	6 cut(s)	5, 311, 371, 422, 443, 966
BspCNI	CTCAG	1 cut(s)	550
BspFNI	CGCG	3 cut(s)	323, 366, 990
BspLI	GGNNCC	3 cut(s)	142, 739, 1309
BspMI	ACCTGC	2 cut(s)	373, 602
BspPI	GGATC	6 cut(s)	37, 217, 285, 736, 871, 1196
BspQI	GCTCTTC	1 cut(s)	225
BspT107I	GGYRCC	2 cut(s)	140, 737
BspTI	CTTAAG	1 cut(s)	694
BsrBI	CCGCTC	2 cut(s)	499, 1253
BsrGI	TGTACA	1 cut(s)	822
BsrI	ACTGG	3 cut(s)	195, 867, 903
BssECI	CCNNGG	6 cut(s)	372, 444, 688, 1036, 1037, 1311
BssMI	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
BssNI	GRCGYC	8 cut(s)	24, 126, 141, 177, 396, 486, 528, 807
BssT1I	CCWWGG	3 cut(s)	444, 688, 1311
Bst2UI	CCWGG	2 cut(s)	290, 373
Bst4CI	ACNGT	1 cut(s)	47
Bst6I	CTCTTC	4 cut(s)	225, 1169, 1320, 1409
BstACI	GRCGYC	8 cut(s)	24, 126, 141, 177, 396, 486, 528, 807
BstAFI	CTTAAG	1 cut(s)	694
BstAPI	GCANNNNNTGC	2 cut(s)	628, 677
BstAUI	TGTACA	1 cut(s)	822
BstC8I	GCNNGC	5 cut(s)	145, 424, 474, 1104, 1493
BstDEI	CTNAG	3 cut(s)	537, 798, 938
BstEII	GGTNACC	1 cut(s)	325
BstENI	CCTNNNNNAGG	1 cut(s)	1302
BstF5I	GGATG	3 cut(s)	842, 1055, 1336
BstFNI	CGCG	3 cut(s)	323, 366, 990
BstH2I	RGCGCY	1 cut(s)	144
BstHHI	GCGC	5 cut(s)	143, 366, 990, 1081, 1171
BstKTI	GATC	9 cut(s)	32, 212, 280, 543, 731, 879, 1191, 1227, 1453
BstMAI	GTCTC	1 cut(s)	667
BstMBI	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
BstNI	CCWGG	2 cut(s)	290, 373
BstPI	GGTNACC	1 cut(s)	325
BstSCI	CCNGG	4 cut(s)	288, 371, 1036, 1037
BstSLI	GKGCMC	1 cut(s)	624
BstUI	CGCG	3 cut(s)	323, 366, 990
BstV1I	GCAGC	3 cut(s)	122, 583, 801
BstV2I	GAAGAC	3 cut(s)	78, 456, 1269
BstX2I	RGATCY	4 cut(s)	29, 277, 1188, 1224
BstYI	RGATCY	4 cut(s)	29, 277, 1188, 1224
BsuRI	GGCC	6 cut(s)	5, 311, 371, 422, 443, 966
BtgZI	GCGATG	2 cut(s)	491, 1005
BtrI	CACGTC	1 cut(s)	430
BtsCI	GGATG	3 cut(s)	842, 1055, 1336
BtsI	GCAGTG	1 cut(s)	988
BtsIMutI	CAGTG	2 cut(s)	896, 988
BveI	ACCTGC	2 cut(s)	373, 602
Cac8I	GCNNGC	5 cut(s)	145, 424, 474, 1104, 1493
CaiI	CAGNNNCTG	1 cut(s)	617
CfoI	GCGC	5 cut(s)	143, 366, 990, 1081, 1171
Cfr9I	CCCGGG	1 cut(s)	1037
CseI	GACGC	6 cut(s)	134, 185, 329, 404, 475, 815
Csp6I	GTAC	3 cut(s)	823, 1161, 1376
CviAII	CATG	4 cut(s)	907, 1108, 1339, 1399
CviQI	GTAC	3 cut(s)	823, 1161, 1376
DdeI	CTNAG	3 cut(s)	537, 798, 938
DinI	GGCGCC	1 cut(s)	142
DpnI	GATC	9 cut(s)	31, 211, 279, 542, 730, 878, 1190, 1226, 1452
DpnII	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
DraIII	CACNNNGTG	1 cut(s)	902
EaeI	YGGCCR	4 cut(s)	3, 369, 420, 441
Eam1104I	CTCTTC	4 cut(s)	225, 1169, 1320, 1409
EarI	CTCTTC	4 cut(s)	225, 1169, 1320, 1409
EciI	GGCGGA	4 cut(s)	85, 98, 311, 483
Eco130I	CCWWGG	3 cut(s)	444, 688, 1311
Eco24I	GRGCYC	1 cut(s)	820
Eco57I	CTGAAG	3 cut(s)	380, 653, 981
Eco88I	CYCGRG	1 cut(s)	1037
Eco91I	GGTNACC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1302
EcoO65I	GGTNACC	1 cut(s)	325
EcoRII	CCWGG	2 cut(s)	288, 371
EcoT14I	CCWWGG	3 cut(s)	444, 688, 1311
EcoT22I	ATGCAT	2 cut(s)	997, 1018
EcoT38I	GRGCYC	1 cut(s)	820
EgeI	GGCGCC	1 cut(s)	142
EheI	GGCGCC	1 cut(s)	142
ErhI	CCWWGG	3 cut(s)	444, 688, 1311
FaeI	CATG	4 cut(s)	910, 1111, 1342, 1402
FalI	AAGNNNNNCTT	2 cut(s)	1465, 1497
FaqI	GGGAC	1 cut(s)	33
FatI	CATG	4 cut(s)	906, 1107, 1338, 1398
FauI	CCCGC	5 cut(s)	83, 158, 199, 211, 1235
FokI	GGATG	3 cut(s)	829, 1042, 1343
FriOI	GRGCYC	1 cut(s)	820
FspBI	CTAG	2 cut(s)	41, 1304
GlaI	GCGC	5 cut(s)	142, 365, 989, 1080, 1170
HaeII	RGCGCY	1 cut(s)	144
HaeIII	GGCC	6 cut(s)	5, 311, 371, 422, 443, 966
HapII	CCGG	3 cut(s)	207, 236, 1038
HgaI	GACGC	6 cut(s)	134, 185, 329, 404, 475, 815
HhaI	GCGC	5 cut(s)	143, 366, 990, 1081, 1171
Hin1I	GRCGYC	8 cut(s)	24, 126, 141, 177, 396, 486, 528, 807
Hin1II	CATG	4 cut(s)	910, 1111, 1342, 1402
Hin6I	GCGC	5 cut(s)	141, 364, 988, 1079, 1169
HinP1I	GCGC	5 cut(s)	141, 364, 988, 1079, 1169
HinfI	GANTC	7 cut(s)	344, 452, 518, 644, 707, 924, 1031
HpaII	CCGG	3 cut(s)	207, 236, 1038
HphI	GGTGA	3 cut(s)	5, 337, 914
Hpy166II	GTNNAC	3 cut(s)	589, 622, 1210
Hpy188III	TCNNGA	4 cut(s)	403, 766, 959, 1046
Hpy8I	GTNNAC	3 cut(s)	589, 622, 1210
HpyAV	CCTTC	3 cut(s)	100, 235, 956
HpyCH4III	ACNGT	1 cut(s)	47
HpyCH4IV	ACGT	3 cut(s)	24, 429, 528
HpyCH4V	TGCA	8 cut(s)	382, 622, 680, 896, 932, 995, 1016, 1390
HpyF3I	CTNAG	3 cut(s)	537, 798, 938
HpySE526I	ACGT	3 cut(s)	24, 429, 528
Hsp92I	GRCGYC	8 cut(s)	24, 126, 141, 177, 396, 486, 528, 807
Hsp92II	CATG	4 cut(s)	910, 1111, 1342, 1402
HspAI	GCGC	5 cut(s)	141, 364, 988, 1079, 1169
KasI	GGCGCC	1 cut(s)	140
Kzo9I	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	4 cut(s)	152, 355, 1250, 1267
Lsp1109I	GCAGC	3 cut(s)	122, 583, 801
LweI	GCATC	7 cut(s)	468, 523, 554, 582, 982, 1003, 1064
MaeI	CTAG	2 cut(s)	41, 1304
MaeII	ACGT	3 cut(s)	24, 429, 528
MaeIII	GTNAC	4 cut(s)	11, 325, 902, 1461
MalI	GATC	9 cut(s)	31, 211, 279, 542, 730, 878, 1190, 1226, 1452
MbiI	CCGCTC	2 cut(s)	499, 1253
MboI	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
MflI	RGATCY	4 cut(s)	29, 277, 1188, 1224
MhlI	GDGCHC	2 cut(s)	624, 820
MlsI	TGGCCA	3 cut(s)	5, 371, 443
MluCI	AATT	9 cut(s)	675, 682, 783, 933, 1021, 1142, 1266, 1370, 1423
MluNI	TGGCCA	3 cut(s)	5, 371, 443
Mly113I	GGCGCC	1 cut(s)	141
MlyI	GAGTC	4 cut(s)	353, 446, 512, 1025
MmeI	TCCRAC	3 cut(s)	7, 285, 484
Mox20I	TGGCCA	3 cut(s)	5, 371, 443
Mph1103I	ATGCAT	2 cut(s)	997, 1018
MscI	TGGCCA	3 cut(s)	5, 371, 443
MseI	TTAA	6 cut(s)	116, 695, 756, 891, 1067, 1145
MslI	CAYNNNNRTG	2 cut(s)	911, 1067
Msp20I	TGGCCA	3 cut(s)	5, 371, 443
MspA1I	CMGCKG	1 cut(s)	135
MspCI	CTTAAG	1 cut(s)	694
MspI	CCGG	3 cut(s)	207, 236, 1038
MspR9I	CCNGG	4 cut(s)	290, 373, 1038, 1039
Mva1269I	GAATGC	2 cut(s)	513, 995
MvaI	CCWGG	2 cut(s)	290, 373
MvnI	CGCG	3 cut(s)	323, 366, 990
NarI	GGCGCC	1 cut(s)	141
NciI	CCSGG	2 cut(s)	1038, 1039
NdeII	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
NlaIII	CATG	4 cut(s)	910, 1111, 1342, 1402
NlaIV	GGNNCC	3 cut(s)	142, 739, 1309
NmeAIII	GCCGAG	3 cut(s)	337, 462, 549
NmuCI	GTSAC	4 cut(s)	11, 325, 902, 1461
NsiI	ATGCAT	2 cut(s)	997, 1018
PaqCI	CACCTGC	1 cut(s)	602
PciSI	GCTCTTC	1 cut(s)	225
PcsI	WCGNNNNNNNCGW	3 cut(s)	399, 510, 519
PctI	GAATGC	2 cut(s)	513, 995
PfeI	GAWTC	3 cut(s)	644, 707, 924
PflFI	GACNNNGTC	2 cut(s)	128, 398
PflMI	CCANNNNNTGG	1 cut(s)	1271
PleI	GAGTC	4 cut(s)	352, 446, 512, 1025
PluTI	GGCGCC	1 cut(s)	144
PpsI	GAGTC	4 cut(s)	352, 446, 512, 1025
Psp6I	CCWGG	2 cut(s)	288, 371
PspEI	GGTNACC	1 cut(s)	325
PspGI	CCWGG	2 cut(s)	288, 371
PspN4I	GGNNCC	3 cut(s)	142, 739, 1309
PstNI	CAGNNNCTG	1 cut(s)	617
PsuI	RGATCY	4 cut(s)	29, 277, 1188, 1224
PsyI	GACNNNGTC	2 cut(s)	128, 398
PvuII	CAGCTG	1 cut(s)	135
RsaI	GTAC	3 cut(s)	824, 1162, 1377
RsaNI	GTAC	3 cut(s)	823, 1161, 1376
RseI	CAYNNNNRTG	2 cut(s)	911, 1067
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	6 cut(s)	116, 695, 756, 891, 1067, 1145
Sau3AI	GATC	9 cut(s)	29, 209, 277, 540, 728, 876, 1188, 1224, 1450
SchI	GAGTC	4 cut(s)	353, 446, 512, 1025
ScrFI	CCNGG	4 cut(s)	290, 373, 1038, 1039
SduI	GDGCHC	2 cut(s)	624, 820
SfaNI	GCATC	7 cut(s)	468, 523, 554, 582, 982, 1003, 1064
SfoI	GGCGCC	1 cut(s)	142
SmaI	CCCGGG	1 cut(s)	1039
SmiMI	CAYNNNNRTG	2 cut(s)	911, 1067
SmlI	CTYRAG	5 cut(s)	218, 694, 764, 811, 1471
SmoI	CTYRAG	5 cut(s)	218, 694, 764, 811, 1471
Sse9I	AATT	9 cut(s)	675, 682, 783, 933, 1021, 1142, 1266, 1370, 1423
SspDI	GGCGCC	1 cut(s)	140
SspMI	CTAG	2 cut(s)	41, 1304
StyD4I	CCNGG	4 cut(s)	288, 371, 1036, 1037
StyI	CCWWGG	3 cut(s)	444, 688, 1311
TaaI	ACNGT	1 cut(s)	47
TaiI	ACGT	3 cut(s)	27, 432, 531
TaqI	TCGA	7 cut(s)	123, 387, 402, 513, 531, 1140, 1184
TasI	AATT	9 cut(s)	675, 682, 783, 933, 1021, 1142, 1266, 1370, 1423
TatI	WGTACW	3 cut(s)	822, 1160, 1375
TauI	GCSGC	8 cut(s)	101, 114, 141, 182, 185, 296, 422, 499
TfiI	GAWTC	3 cut(s)	644, 707, 924
Tru1I	TTAA	6 cut(s)	116, 695, 756, 891, 1067, 1145
Tru9I	TTAA	6 cut(s)	116, 695, 756, 891, 1067, 1145
TscAI	CASTG	2 cut(s)	903, 988
TseFI	GTSAC	4 cut(s)	11, 325, 902, 1461
TseI	GCWGC	3 cut(s)	135, 596, 789
Tsp45I	GTSAC	4 cut(s)	11, 325, 902, 1461
TspDTI	ATGAA	1 cut(s)	1269
TspGWI	ACGGA	1 cut(s)	1434
TspMI	CCCGGG	1 cut(s)	1037
TspRI	CASTG	2 cut(s)	903, 988
Tth111I	GACNNNGTC	2 cut(s)	128, 398
Van91I	CCANNNNNTGG	1 cut(s)	1271
Vha464I	CTTAAG	1 cut(s)	694
VneI	GTGCAC	1 cut(s)	620
XagI	CCTNNNNNAGG	1 cut(s)	1302
XapI	RAATTY	1 cut(s)	682
XcmI	CCANNNNNNNNNTGG	2 cut(s)	337, 1318
XmaI	CCCGGG	1 cut(s)	1037
XspI	CTAG	2 cut(s)	41, 1304
ZraI	GACGTC	2 cut(s)	25, 529
Zsp2I	ATGCAT	2 cut(s)	997, 1018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.