Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009437

Physical Location & Seq

Genomic Coordinates Forward (+)

9373093 .. 9376542

Gene Structure 3450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCCAAGTGTCACCGCAACGATGTCGGATCTATTGTCCTTGACCGTCCCTCCACCACCGCCCACTCCCGCCTCTGGTCCTCCTTCTCCGCCGCCTCATTCCGCCGCTTAATCTTCGACGCCGTCAGCTGCGGCGCCAGCTCCCGCTACCGCCACCGACACGAAACCGACCCCGCCGCCCCTCCCGCTCCCGCCAGTCCACCCACTCCTCCCGCCGGATCAACCGTCAAGCAATCCAAAGAGCCGGAAAAGGCAAAGCCGAAGCCCAAGTCCGAGAAGCTGTCGGATCTTCTGAACCTGGCGGCGGAATGGTCGGAGGCCGAGAGCGACGCGGTGACCAAGAAGAAAGTGGAGTCATTGGAGGAGCTGAAGCGCGTGGCCAGGGAGTTGCAGGTCGAAAACGACGCCGTCGAGAAGCGGAGAGAGGCGGCCAGCCACGTCAGACTTCTGGCCAAGGAAGACTCCGAAGCGAGAGCCACCCTTGCGATGCTCGGCGTCATTCCGCCGCTCGTCGGAATGCTCGACGACTCCGATGACGTCGATGCTCAGATCGCATCACTCTATGCTCTGCTCAATCTCGGCATCGGCAACGATGTGAACAAAGCTGCTATCCTCCAAGCAGGTGCTGTGCACAAAATGCTGAAGCTGATTGAATCTCCAAACTCATCAGTCTCCGAAGCAATAATTGCAAACTTCCTTGGCTTAAGTGCTTTGGATTCTAATAAACCCATTATTGGATCATCAGGTGCCATACCTTTCTTGCTTAAAATCCTGAAGAATTTGGACAACACAATTAGCAGCCAAGCTAAGCAAGACGCCTTGAGGGCTCTGTACAATCTTTCAATCTTCCCATCCAATGTTTCCTATATACTGGAAACCGATATGATCCCATTTTTCTTTAATGCACTGGGTGACATGGAAATGAGTGAAAGAATCCTTGCAATTCTAAGCAACATGGTATCTACTCCTGAGGGCCGAAAAGCAATCAGCAGTGTGCGCGATGCATTCCCTGTATTGGTTGATGCATTGAATTGGAACGACTCCCCTGGGTGTCAAGAGAAAGCATCCTACATTTTAATGGTAATGGCGCACAAGGCGTTTGGGGACAGGCAAGCCATGATTGAGGCAGGAGTGGTATCAGCATTGCTCGAATTAACGCTTTTGGGTAGTACATTGGCGCAGAAGAGAGCTTCGAGGATCTTGGAGTGTTTGAGAGTGGACAAAGGAAAACAGATCTCACAGAACTTTGGCGGGAGTGGAGCCGTTTCTGCTCCAATTTGTGGGTCTTCATCATCTTCTTCAAACCCTAATCTAGGTTCCAAGGAGTGTTTGGAAGAGGATGAGGACATGATGAGTGATGAGAGGAAAGCAGTAAAGCAATTAGTAGAGCAGAGTTTGCAGAGCAACATGAGGAGGATTGTGAAGAGAGCCAATTTGCCCCAAGACTTTGTTCCGTCAGATCATTTCAAGTCACTCACCTCAAGTTCAACTTCAAAGAGCTTGCCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

503

Amino Acids

54.4

Weight (kDa)

6.49

Isoelectric Point (pI)

58.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	133 - 315	4.4e-12	ARMC5
ARM_PUB	PF25598	256 - 393	2.7e-08	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31890 AT4G31890 AT4G31890
fragaria_vesca	FvH4_2g40980 FvH4_2g40980
malus_domestica	MD08G1057900.v1.1 MD15G1038300.v1.1
prunus_persica	Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1
pyrus_communis	pycom08g04810 pycom15g03580
rosa_chinensis	RchiOBHm_Chr6g0299591
rosa_laevigata	RLG00000011407
rosa_multiflora	Rmu_sc0024600.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168530
rosa_rugosa	Rorug06G0290600 Rorug06G0290700
rosa_samantha	Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800
rosa_wichuraiana	Rw6G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	611
AatII	GACGTC	1 cut(s)	540
Acc36I	ACCTGC	2 cut(s)	382, 611
AccB1I	GGYRCC	2 cut(s)	134, 746
AccB7I	CCANNNNNTGG	1 cut(s)	1280
AccBSI	CCGCTC	2 cut(s)	188, 508
AccII	CGCG	3 cut(s)	332, 375, 999
AclWI	GGATC	6 cut(s)	37, 226, 294, 745, 880, 1205
AcoI	YGGCCR	4 cut(s)	3, 378, 429, 450
AcsI	RAATTY	1 cut(s)	778
AcuI	CTGAAG	3 cut(s)	389, 662, 794
AcyI	GRCGYC	6 cut(s)	120, 135, 405, 495, 537, 816
AdeI	CACNNNGTG	1 cut(s)	911
AfaI	GTAC	2 cut(s)	833, 1171
AfiI	CCNNNNNNNGG	8 cut(s)	75, 215, 304, 512, 734, 1015, 1280, 1313
AflII	CTTAAG	1 cut(s)	703
AgsI	TTSAA	7 cut(s)	653, 843, 1030, 1302, 1468, 1488, 1494
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	3 cut(s)	297, 380, 1045
AjuI	GAANNNNNNNTTGG	2 cut(s)	1434, 1466
AluBI	AGCT	9 cut(s)	129, 141, 280, 367, 605, 646, 806, 1190, 1500
AluI	AGCT	9 cut(s)	129, 141, 280, 367, 605, 646, 806, 1190, 1500
Alw21I	GWGCWC	1 cut(s)	633
Alw26I	GTCTC	1 cut(s)	676
Alw44I	GTGCAC	1 cut(s)	629
AlwI	GGATC	6 cut(s)	37, 226, 294, 745, 880, 1205
AlwNI	CAGNNNCTG	1 cut(s)	626
AoxI	GGCC	6 cut(s)	3, 318, 378, 429, 450, 973
ApaLI	GTGCAC	1 cut(s)	629
ApeKI	GCWGC	3 cut(s)	129, 605, 798
ApoI	RAATTY	1 cut(s)	778
ArsI	GACNNNNNNTTYG	2 cut(s)	254, 286
AspLEI	GCGC	5 cut(s)	137, 375, 999, 1090, 1180
AspS9I	GGNCC	2 cut(s)	78, 973
AsuHPI	GGTGA	4 cut(s)	5, 346, 923, 1468
AvaII	GGWCC	1 cut(s)	78
AxyI	CCTNAGG	1 cut(s)	969
BaeGI	GKGCMC	1 cut(s)	633
BalI	TGGCCA	3 cut(s)	5, 380, 452
BanI	GGYRCC	2 cut(s)	134, 746
BanII	GRGCYC	1 cut(s)	829
BbsI	GAAGAC	2 cut(s)	465, 1278
Bbv12I	GWGCWC	1 cut(s)	633
BbvI	GCAGC	3 cut(s)	116, 592, 810
BccI	CCATC	1 cut(s)	859
BceAI	ACGGC	3 cut(s)	107, 392, 1247
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	3 cut(s)	299, 382, 1047
BcoDI	GTCTC	1 cut(s)	676
BfaI	CTAG	1 cut(s)	1313
BfoI	RGCGCY	1 cut(s)	138
BfrI	CTTAAG	1 cut(s)	703
BfuAI	ACCTGC	2 cut(s)	382, 611
BglI	GCCNNNNNGGC	1 cut(s)	824
BglII	AGATCT	1 cut(s)	1233
BlpI	GCTNAGC	1 cut(s)	807
Bme1390I	CCNGG	3 cut(s)	299, 382, 1047
Bme18I	GGWCC	1 cut(s)	78
BmgBI	CACGTC	1 cut(s)	439
BmgT120I	GGNCC	2 cut(s)	78, 973
BmiI	GGNNCC	4 cut(s)	136, 748, 1261, 1318
BmrFI	CCNGG	3 cut(s)	299, 382, 1047
BmrI	ACTGGG	1 cut(s)	917
BmsI	GCATC	7 cut(s)	477, 532, 563, 591, 991, 1012, 1073
BmuI	ACTGGG	1 cut(s)	917
BpiI	GAAGAC	2 cut(s)	465, 1278
Bpu1102I	GCTNAGC	1 cut(s)	807
BpuEI	CTTGAG	2 cut(s)	841, 1465
BsaHI	GRCGYC	6 cut(s)	120, 135, 405, 495, 537, 816
BsaJI	CCNNGG	6 cut(s)	381, 453, 697, 1045, 1046, 1320
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	8 cut(s)	75, 215, 304, 512, 734, 1015, 1280, 1313
Bse1I	ACTGG	3 cut(s)	195, 876, 912
Bse21I	CCTNAGG	1 cut(s)	969
Bse3DI	GCAATG	1 cut(s)	1142
BseBI	CCWGG	3 cut(s)	299, 382, 1047
BseDI	CCNNGG	6 cut(s)	381, 453, 697, 1045, 1046, 1320
BseGI	GGATG	3 cut(s)	851, 1064, 1345
BseLI	CCNNNNNNNGG	8 cut(s)	75, 215, 304, 512, 734, 1015, 1280, 1313
BseMI	GCAATG	1 cut(s)	1142
BseMII	CTCAG	2 cut(s)	560, 960
BseNI	ACTGG	3 cut(s)	195, 876, 912
BseRI	GAGGAG	3 cut(s)	198, 377, 1426
BseSI	GKGCMC	1 cut(s)	633
BseXI	GCAGC	3 cut(s)	116, 592, 810
Bsh1236I	CGCG	3 cut(s)	332, 375, 999
BshFI	GGCC	6 cut(s)	5, 320, 380, 431, 452, 975
BshNI	GGYRCC	2 cut(s)	134, 746
BsiHKAI	GWGCWC	1 cut(s)	633
BsiSI	CCGG	2 cut(s)	216, 245
BslFI	GGGAC	2 cut(s)	33, 1118
BslI	CCNNNNNNNGG	8 cut(s)	75, 215, 304, 512, 734, 1015, 1280, 1313
BsmAI	GTCTC	1 cut(s)	676
BsmFI	GGGAC	2 cut(s)	33, 1118
BsmI	GAATGC	2 cut(s)	522, 1004
BsnI	GGCC	6 cut(s)	5, 320, 380, 431, 452, 975
Bsp1286I	GDGCHC	2 cut(s)	633, 829
Bsp1407I	TGTACA	1 cut(s)	831
Bsp143I	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
Bsp1720I	GCTNAGC	1 cut(s)	807
BspANI	GGCC	6 cut(s)	5, 320, 380, 431, 452, 975
BspCNI	CTCAG	2 cut(s)	559, 961
BspFNI	CGCG	3 cut(s)	332, 375, 999
BspLI	GGNNCC	4 cut(s)	136, 748, 1261, 1318
BspMI	ACCTGC	2 cut(s)	382, 611
BspPI	GGATC	6 cut(s)	37, 226, 294, 745, 880, 1205
BspT107I	GGYRCC	2 cut(s)	134, 746
BspTI	CTTAAG	1 cut(s)	703
BsrBI	CCGCTC	2 cut(s)	188, 508
BsrDI	GCAATG	1 cut(s)	1142
BsrGI	TGTACA	1 cut(s)	831
BsrI	ACTGG	3 cut(s)	195, 876, 912
BssECI	CCNNGG	6 cut(s)	381, 453, 697, 1045, 1046, 1320
BssMI	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
BssNI	GRCGYC	6 cut(s)	120, 135, 405, 495, 537, 816
BssT1I	CCWWGG	3 cut(s)	453, 697, 1320
Bst2UI	CCWGG	3 cut(s)	299, 382, 1047
Bst4CI	ACNGT	2 cut(s)	47, 226
Bst6I	CTCTTC	3 cut(s)	1178, 1329, 1418
BstACI	GRCGYC	6 cut(s)	120, 135, 405, 495, 537, 816
BstAFI	CTTAAG	1 cut(s)	703
BstAPI	GCANNNNNTGC	3 cut(s)	637, 686, 1396
BstAUI	TGTACA	1 cut(s)	831
BstC8I	GCNNGC	4 cut(s)	139, 433, 1113, 1502
BstDEI	CTNAG	4 cut(s)	546, 807, 947, 969
BstEII	GGTNACC	1 cut(s)	334
BstENI	CCTNNNNNAGG	1 cut(s)	1311
BstF5I	GGATG	3 cut(s)	851, 1064, 1345
BstFNI	CGCG	3 cut(s)	332, 375, 999
BstH2I	RGCGCY	1 cut(s)	138
BstHHI	GCGC	5 cut(s)	137, 375, 999, 1090, 1180
BstKTI	GATC	9 cut(s)	32, 221, 289, 552, 740, 888, 1200, 1236, 1462
BstMAI	GTCTC	1 cut(s)	676
BstMBI	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
BstNI	CCWGG	3 cut(s)	299, 382, 1047
BstPI	GGTNACC	1 cut(s)	334
BstSCI	CCNGG	3 cut(s)	297, 380, 1045
BstSLI	GKGCMC	1 cut(s)	633
BstUI	CGCG	3 cut(s)	332, 375, 999
BstV1I	GCAGC	3 cut(s)	116, 592, 810
BstV2I	GAAGAC	2 cut(s)	465, 1278
BstX2I	RGATCY	4 cut(s)	29, 286, 1197, 1233
BstYI	RGATCY	4 cut(s)	29, 286, 1197, 1233
Bsu36I	CCTNAGG	1 cut(s)	969
BsuRI	GGCC	6 cut(s)	5, 320, 380, 431, 452, 975
BtgZI	GCGATG	2 cut(s)	500, 1014
BtrI	CACGTC	1 cut(s)	439
BtsCI	GGATG	3 cut(s)	851, 1064, 1345
BtsI	GCAGTG	1 cut(s)	997
BtsIMutI	CAGTG	2 cut(s)	905, 997
BveI	ACCTGC	2 cut(s)	382, 611
Cac8I	GCNNGC	4 cut(s)	139, 433, 1113, 1502
CaiI	CAGNNNCTG	1 cut(s)	626
CfoI	GCGC	5 cut(s)	137, 375, 999, 1090, 1180
Cfr13I	GGNCC	2 cut(s)	78, 973
CseI	GACGC	5 cut(s)	128, 338, 413, 484, 824
Csp6I	GTAC	2 cut(s)	832, 1170
CviAII	CATG	5 cut(s)	916, 955, 1117, 1348, 1408
CviQI	GTAC	2 cut(s)	832, 1170
DdeI	CTNAG	4 cut(s)	546, 807, 947, 969
DinI	GGCGCC	1 cut(s)	136
DpnI	GATC	9 cut(s)	31, 220, 288, 551, 739, 887, 1199, 1235, 1461
DpnII	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
DraIII	CACNNNGTG	1 cut(s)	911
EaeI	YGGCCR	4 cut(s)	3, 378, 429, 450
Eam1104I	CTCTTC	3 cut(s)	1178, 1329, 1418
EarI	CTCTTC	3 cut(s)	1178, 1329, 1418
EciI	GGCGGA	4 cut(s)	79, 92, 320, 492
Eco130I	CCWWGG	3 cut(s)	453, 697, 1320
Eco24I	GRGCYC	1 cut(s)	829
Eco47I	GGWCC	1 cut(s)	78
Eco57I	CTGAAG	3 cut(s)	389, 662, 794
Eco81I	CCTNAGG	1 cut(s)	969
Eco91I	GGTNACC	1 cut(s)	334
EcoNI	CCTNNNNNAGG	1 cut(s)	1311
EcoO65I	GGTNACC	1 cut(s)	334
EcoRII	CCWGG	3 cut(s)	297, 380, 1045
EcoT14I	CCWWGG	3 cut(s)	453, 697, 1320
EcoT22I	ATGCAT	2 cut(s)	1006, 1027
EcoT38I	GRGCYC	1 cut(s)	829
EgeI	GGCGCC	1 cut(s)	136
EheI	GGCGCC	1 cut(s)	136
ErhI	CCWWGG	3 cut(s)	453, 697, 1320
FaeI	CATG	5 cut(s)	919, 958, 1120, 1351, 1411
FalI	AAGNNNNNCTT	2 cut(s)	1474, 1506
FaqI	GGGAC	2 cut(s)	33, 1118
FatI	CATG	5 cut(s)	915, 954, 1116, 1347, 1407
FauI	CCCGC	7 cut(s)	77, 152, 181, 193, 199, 220, 1244
FokI	GGATG	3 cut(s)	838, 1051, 1352
FriOI	GRGCYC	1 cut(s)	829
FspBI	CTAG	1 cut(s)	1313
GlaI	GCGC	5 cut(s)	136, 374, 998, 1089, 1179
HaeII	RGCGCY	1 cut(s)	138
HaeIII	GGCC	6 cut(s)	5, 320, 380, 431, 452, 975
HapII	CCGG	2 cut(s)	216, 245
HgaI	GACGC	5 cut(s)	128, 338, 413, 484, 824
HhaI	GCGC	5 cut(s)	137, 375, 999, 1090, 1180
Hin1I	GRCGYC	6 cut(s)	120, 135, 405, 495, 537, 816
Hin1II	CATG	5 cut(s)	919, 958, 1120, 1351, 1411
Hin6I	GCGC	5 cut(s)	135, 373, 997, 1088, 1178
HinP1I	GCGC	5 cut(s)	135, 373, 997, 1088, 1178
HinfI	GANTC	7 cut(s)	353, 461, 527, 653, 716, 933, 1040
HpaII	CCGG	2 cut(s)	216, 245
HphI	GGTGA	4 cut(s)	5, 346, 923, 1468
Hpy166II	GTNNAC	4 cut(s)	200, 598, 631, 1219
Hpy188III	TCNNGA	4 cut(s)	412, 772, 968, 1055
Hpy8I	GTNNAC	4 cut(s)	200, 598, 631, 1219
Hpy99I	CGWCG	7 cut(s)	122, 332, 407, 413, 515, 527, 542
HpyAV	CCTTC	1 cut(s)	94
HpyCH4III	ACNGT	2 cut(s)	47, 226
HpyCH4IV	ACGT	2 cut(s)	438, 537
HpyCH4V	TGCA	8 cut(s)	391, 631, 689, 905, 941, 1004, 1025, 1399
HpyF3I	CTNAG	4 cut(s)	546, 807, 947, 969
HpySE526I	ACGT	2 cut(s)	438, 537
Hsp92I	GRCGYC	6 cut(s)	120, 135, 405, 495, 537, 816
Hsp92II	CATG	5 cut(s)	919, 958, 1120, 1351, 1411
HspAI	GCGC	5 cut(s)	135, 373, 997, 1088, 1178
KasI	GGCGCC	1 cut(s)	134
Kzo9I	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
LmnI	GCTCC	5 cut(s)	146, 193, 364, 1259, 1276
Lsp1109I	GCAGC	3 cut(s)	116, 592, 810
LweI	GCATC	7 cut(s)	477, 532, 563, 591, 991, 1012, 1073
MaeI	CTAG	1 cut(s)	1313
MaeII	ACGT	2 cut(s)	438, 537
MaeIII	GTNAC	4 cut(s)	11, 334, 911, 1470
MalI	GATC	9 cut(s)	31, 220, 288, 551, 739, 887, 1199, 1235, 1461
MbiI	CCGCTC	2 cut(s)	188, 508
MboI	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
MflI	RGATCY	4 cut(s)	29, 286, 1197, 1233
MhlI	GDGCHC	2 cut(s)	633, 829
MlsI	TGGCCA	3 cut(s)	5, 380, 452
MluCI	AATT	9 cut(s)	684, 778, 792, 942, 1030, 1151, 1275, 1379, 1432
MluNI	TGGCCA	3 cut(s)	5, 380, 452
Mly113I	GGCGCC	1 cut(s)	135
MlyI	GAGTC	4 cut(s)	362, 455, 521, 1034
MmeI	TCCRAC	4 cut(s)	7, 264, 294, 493
Mox20I	TGGCCA	3 cut(s)	5, 380, 452
Mph1103I	ATGCAT	2 cut(s)	1006, 1027
MscI	TGGCCA	3 cut(s)	5, 380, 452
MseI	TTAA	6 cut(s)	110, 704, 765, 900, 1076, 1154
MslI	CAYNNNNRTG	2 cut(s)	920, 1076
Msp20I	TGGCCA	3 cut(s)	5, 380, 452
MspA1I	CMGCKG	1 cut(s)	129
MspCI	CTTAAG	1 cut(s)	703
MspI	CCGG	2 cut(s)	216, 245
MspR9I	CCNGG	3 cut(s)	299, 382, 1047
Mva1269I	GAATGC	2 cut(s)	522, 1004
MvaI	CCWGG	3 cut(s)	299, 382, 1047
MvnI	CGCG	3 cut(s)	332, 375, 999
NarI	GGCGCC	1 cut(s)	135
NdeII	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
NlaIII	CATG	5 cut(s)	919, 958, 1120, 1351, 1411
NlaIV	GGNNCC	4 cut(s)	136, 748, 1261, 1318
NmeAIII	GCCGAG	3 cut(s)	346, 471, 558
NmuCI	GTSAC	4 cut(s)	11, 334, 911, 1470
NsiI	ATGCAT	2 cut(s)	1006, 1027
PaqCI	CACCTGC	1 cut(s)	611
PasI	CCCWGGG	1 cut(s)	1046
PcsI	WCGNNNNNNNCGW	3 cut(s)	408, 519, 528
PctI	GAATGC	2 cut(s)	522, 1004
PfeI	GAWTC	3 cut(s)	653, 716, 933
PflFI	GACNNNGTC	2 cut(s)	122, 407
PflMI	CCANNNNNTGG	1 cut(s)	1280
PleI	GAGTC	4 cut(s)	361, 455, 521, 1034
PluTI	GGCGCC	1 cut(s)	138
PpsI	GAGTC	4 cut(s)	361, 455, 521, 1034
Psp6I	CCWGG	3 cut(s)	297, 380, 1045
PspEI	GGTNACC	1 cut(s)	334
PspGI	CCWGG	3 cut(s)	297, 380, 1045
PspN4I	GGNNCC	4 cut(s)	136, 748, 1261, 1318
PspPI	GGNCC	2 cut(s)	78, 973
PstNI	CAGNNNCTG	1 cut(s)	626
PsuI	RGATCY	4 cut(s)	29, 286, 1197, 1233
PsyI	GACNNNGTC	2 cut(s)	122, 407
PvuII	CAGCTG	1 cut(s)	129
RsaI	GTAC	2 cut(s)	833, 1171
RsaNI	GTAC	2 cut(s)	832, 1170
RseI	CAYNNNNRTG	2 cut(s)	920, 1076
SaqAI	TTAA	6 cut(s)	110, 704, 765, 900, 1076, 1154
Sau3AI	GATC	9 cut(s)	29, 218, 286, 549, 737, 885, 1197, 1233, 1459
Sau96I	GGNCC	2 cut(s)	78, 973
SchI	GAGTC	4 cut(s)	362, 455, 521, 1034
ScrFI	CCNGG	3 cut(s)	299, 382, 1047
SduI	GDGCHC	2 cut(s)	633, 829
SfaNI	GCATC	7 cut(s)	477, 532, 563, 591, 991, 1012, 1073
SfoI	GGCGCC	1 cut(s)	136
SinI	GGWCC	1 cut(s)	78
SmiMI	CAYNNNNRTG	2 cut(s)	920, 1076
SmlI	CTYRAG	3 cut(s)	703, 820, 1480
SmoI	CTYRAG	3 cut(s)	703, 820, 1480
Sse9I	AATT	9 cut(s)	684, 778, 792, 942, 1030, 1151, 1275, 1379, 1432
SspDI	GGCGCC	1 cut(s)	134
SspMI	CTAG	1 cut(s)	1313
StyD4I	CCNGG	3 cut(s)	297, 380, 1045
StyI	CCWWGG	3 cut(s)	453, 697, 1320
TaaI	ACNGT	2 cut(s)	47, 226
TaiI	ACGT	2 cut(s)	441, 540
TaqI	TCGA	7 cut(s)	117, 396, 411, 522, 540, 1149, 1193
TasI	AATT	9 cut(s)	684, 778, 792, 942, 1030, 1151, 1275, 1379, 1432
TatI	WGTACW	2 cut(s)	831, 1169
TauI	GCSGC	7 cut(s)	95, 108, 135, 179, 305, 431, 508
TfiI	GAWTC	3 cut(s)	653, 716, 933
Tru1I	TTAA	6 cut(s)	110, 704, 765, 900, 1076, 1154
Tru9I	TTAA	6 cut(s)	110, 704, 765, 900, 1076, 1154
TscAI	CASTG	2 cut(s)	912, 997
TseFI	GTSAC	4 cut(s)	11, 334, 911, 1470
TseI	GCWGC	3 cut(s)	129, 605, 798
Tsp45I	GTSAC	4 cut(s)	11, 334, 911, 1470
TspDTI	ATGAA	1 cut(s)	1278
TspGWI	ACGGA	1 cut(s)	1443
TspRI	CASTG	2 cut(s)	912, 997
Tth111I	GACNNNGTC	2 cut(s)	122, 407
Van91I	CCANNNNNTGG	1 cut(s)	1280
Vha464I	CTTAAG	1 cut(s)	703
VneI	GTGCAC	1 cut(s)	629
VpaK11BI	GGWCC	1 cut(s)	78
XagI	CCTNNNNNAGG	1 cut(s)	1311
XapI	RAATTY	1 cut(s)	778
XcmI	CCANNNNNNNNNTGG	2 cut(s)	346, 1327
XspI	CTAG	1 cut(s)	1313
ZraI	GACGTC	1 cut(s)	538
Zsp2I	ATGCAT	2 cut(s)	1006, 1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.