Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0009437

Physical Location & Seq

Genomic Coordinates Reverse (-)

60023635 .. 60027166

Gene Structure 3532 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG415500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCCAAGTGTCACCGCAACGACGTCGGATCTATTGTCCTAGACCGTCCCTCCACCACCGCCCACTCCCGCCTCTGGTCTTCCTTCTCCGCCTCCTCATTCCGCCGCTTAATCTTCGACGCCGTCAGCTGCGGCGCCAGCTCCCGCCACCGCCACCGACACGAAACCGACGCCGCCGCCCCTCCCGCCAGTCCTCCCGCCGGATCAACCCTCAAGCAATCCGAAGAGCCGGAGAAGGCAAAGCCGAAACCCAAGTCCGAGAAGCTCTCGGATCTTCTGAACCTGGCGGCGGAATGGTCGGAGGCCGAGAGCGACGCGGTGACCAAGAAGAAAGTGGAGTCATTGGAGGAGCTGAAGCGCGTGGCCAGGGAGTTGCAGGTCGAAAACGACGCCGTCGAGAAGCGGAGAGAGGCGGCCAGCCACGTCAGACTTATGGCCAAGGAAGACTCCGAAGCGAGAGCCACGCTTGCGATGCTCGGCGTCATTCCGCCGCTCGTCGGAATGCTCGACGACTCCGATGACGTCGATGCTCAGATCGCATCACTCTATGCTCTGCTCAATCTCGGCATCGGCAACGATGTGAACAAAGCTGCTATCCTCCAAGCAGGTGCTGTGCACAAAATGCTGAAGCTGATTGAATCTCCAAACTCATCAGTCTCCGAAGCAATAATTGCAAACTTCCTTGGCTTAAGTGCTTTGGATTCTAATAAACCCATTATTGGATCATCAGGTGCCATACCTTTCTTGCTTAAAATCCTCAAGAATTTGGACAACACAATTAGCAGCCAAGCTAAGCAAGACGCCTTGAGGGCTCTGTACAATCTTTCAATCTTCCCATCCAATGTTTCCTATATACTGGAAACCGATATGATCCCATTTTTCTTTAATGCACTGGGTGACATGGAAATGAGTGAAAGAATCCTTGCAATTCTAAGCAATATGGTATCTACTCCTGAAGGCCGAAAAGCAATCAGCAGTGTGCGCGATGCATTCCCTGTATTGGTTGATGCATTGAATTGGAACGACTCCCCCGGGTGTCAAGAGAAAGCATCCTACATTTTAATGGTAATGGCGCACAAGGCGTTTGGGGATAGGCAAGCCATGATTGAGGCAGGAGTGGTATCAGCATTGCTCGAATTAACGCTTTTGGGTAGTACATTGGCGCAGAAGAGAGCTTCGAGGATCTTGGAGTGTTTGAGAGTGGACAAAGGAAAACAGATCTCACAGAACTTTGGCGGGAGTGGAGCGGTTTCTGCTCCAATTTGTGGGTCTTCATCATCTTCTACAAACCCTAATCTAGGTTCCAAGGAGTGTTTGGAAGAGGATGAGGACATGATGAGTGATGAGAGGAAAGCAGTAAAGCAATTAGTACAACAGAGTTTGCAGAGCAACATGAGGAGGATTGTGAAGAGAGCCAATTTGCCCCAAGACTTTGTTCCGTCAGATCATTTCAAGTCACTCATCTCAAGTTCAACTTCAAAGAGCTTGCCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

498

Amino Acids

53.96

Weight (kDa)

6.36

Isoelectric Point (pI)

59.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	128 - 310	1.2e-11	ARMC5
ARM_PUB	PF25598	251 - 388	2.7e-08	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31890 AT4G31890 AT4G31890
fragaria_vesca	FvH4_2g40980 FvH4_2g40980
malus_domestica	MD08G1057900.v1.1 MD15G1038300.v1.1
prunus_persica	Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1
pyrus_communis	pycom08g04810 pycom15g03580
rosa_chinensis	RchiOBHm_Chr6g0299591
rosa_laevigata	RLG00000011407
rosa_multiflora	Rmu_sc0024600.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168530
rosa_rugosa	Rorug06G0290600 Rorug06G0290700
rosa_samantha	Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800
rosa_wichuraiana	Rw6G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	596
AatII	GACGTC	2 cut(s)	27, 525
Acc36I	ACCTGC	2 cut(s)	367, 596
AccB1I	GGYRCC	2 cut(s)	134, 731
AccB7I	CCANNNNNTGG	1 cut(s)	1265
AccBSI	CCGCTC	2 cut(s)	493, 1247
AccII	CGCG	3 cut(s)	317, 360, 984
AclWI	GGATC	6 cut(s)	37, 211, 279, 730, 865, 1190
AcoI	YGGCCR	4 cut(s)	3, 363, 414, 435
AcsI	RAATTY	1 cut(s)	763
AcuI	CTGAAG	3 cut(s)	374, 647, 975
AcyI	GRCGYC	8 cut(s)	24, 120, 135, 171, 390, 480, 522, 801
AdeI	CACNNNGTG	1 cut(s)	896
AfaI	GTAC	3 cut(s)	818, 1156, 1371
AfiI	CCNNNNNNNGG	8 cut(s)	75, 200, 289, 497, 719, 1000, 1265, 1298
AflII	CTTAAG	1 cut(s)	688
AgsI	TTSAA	6 cut(s)	638, 828, 1015, 1453, 1473, 1479
AjiI	CACGTC	1 cut(s)	424
AjnI	CCWGG	2 cut(s)	282, 365
AjuI	GAANNNNNNNTTGG	2 cut(s)	1419, 1451
AluBI	AGCT	9 cut(s)	129, 141, 265, 352, 590, 631, 791, 1175, 1485
AluI	AGCT	9 cut(s)	129, 141, 265, 352, 590, 631, 791, 1175, 1485
Alw21I	GWGCWC	1 cut(s)	618
Alw26I	GTCTC	1 cut(s)	661
Alw44I	GTGCAC	1 cut(s)	614
AlwI	GGATC	6 cut(s)	37, 211, 279, 730, 865, 1190
AlwNI	CAGNNNCTG	1 cut(s)	611
Ama87I	CYCGRG	1 cut(s)	1031
AoxI	GGCC	6 cut(s)	3, 303, 363, 414, 435, 958
ApaLI	GTGCAC	1 cut(s)	614
ApeKI	GCWGC	3 cut(s)	129, 590, 783
ApoI	RAATTY	1 cut(s)	763
ArsI	GACNNNNNNTTYG	2 cut(s)	239, 271
AspLEI	GCGC	5 cut(s)	137, 360, 984, 1075, 1165
AsuC2I	CCSGG	2 cut(s)	1032, 1033
AsuHPI	GGTGA	3 cut(s)	5, 331, 908
AvaI	CYCGRG	1 cut(s)	1031
BaeGI	GKGCMC	1 cut(s)	618
BalI	TGGCCA	3 cut(s)	5, 365, 437
BanI	GGYRCC	2 cut(s)	134, 731
BanII	GRGCYC	1 cut(s)	814
BbsI	GAAGAC	3 cut(s)	72, 450, 1263
Bbv12I	GWGCWC	1 cut(s)	618
BbvI	GCAGC	3 cut(s)	116, 577, 795
BccI	CCATC	1 cut(s)	844
BceAI	ACGGC	2 cut(s)	107, 377
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	2 cut(s)	284, 367
BcnI	CCSGG	2 cut(s)	1032, 1033
BcoDI	GTCTC	1 cut(s)	661
BfaI	CTAG	2 cut(s)	41, 1298
BfoI	RGCGCY	1 cut(s)	138
BfrI	CTTAAG	1 cut(s)	688
BfuAI	ACCTGC	2 cut(s)	367, 596
BglI	GCCNNNNNGGC	1 cut(s)	809
BglII	AGATCT	1 cut(s)	1218
BlpI	GCTNAGC	1 cut(s)	792
Bme1390I	CCNGG	4 cut(s)	284, 367, 1032, 1033
BmeT110I	CYCGRG	1 cut(s)	1031
BmgBI	CACGTC	1 cut(s)	424
BmiI	GGNNCC	3 cut(s)	136, 733, 1303
BmrFI	CCNGG	4 cut(s)	284, 367, 1032, 1033
BmrI	ACTGGG	1 cut(s)	902
BmsI	GCATC	7 cut(s)	462, 517, 548, 576, 976, 997, 1058
BmuI	ACTGGG	1 cut(s)	902
BpiI	GAAGAC	3 cut(s)	72, 450, 1263
BplI	GAGNNNNNCTC	2 cut(s)	251, 283
Bpu1102I	GCTNAGC	1 cut(s)	792
BpuEI	CTTGAG	4 cut(s)	197, 743, 826, 1450
BpuMI	CCSGG	2 cut(s)	1032, 1033
BsaHI	GRCGYC	8 cut(s)	24, 120, 135, 171, 390, 480, 522, 801
BsaJI	CCNNGG	6 cut(s)	366, 438, 682, 1030, 1031, 1305
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	8 cut(s)	75, 200, 289, 497, 719, 1000, 1265, 1298
Bse1I	ACTGG	3 cut(s)	189, 861, 897
Bse3DI	GCAATG	1 cut(s)	1127
BseBI	CCWGG	2 cut(s)	284, 367
BseDI	CCNNGG	6 cut(s)	366, 438, 682, 1030, 1031, 1305
BseGI	GGATG	3 cut(s)	836, 1049, 1330
BseLI	CCNNNNNNNGG	8 cut(s)	75, 200, 289, 497, 719, 1000, 1265, 1298
BseMI	GCAATG	1 cut(s)	1127
BseMII	CTCAG	1 cut(s)	545
BseNI	ACTGG	3 cut(s)	189, 861, 897
BseRI	GAGGAG	3 cut(s)	85, 362, 1411
BseSI	GKGCMC	1 cut(s)	618
BseXI	GCAGC	3 cut(s)	116, 577, 795
Bsh1236I	CGCG	3 cut(s)	317, 360, 984
BshFI	GGCC	6 cut(s)	5, 305, 365, 416, 437, 960
BshNI	GGYRCC	2 cut(s)	134, 731
BsiHKAI	GWGCWC	1 cut(s)	618
BsiHKCI	CYCGRG	1 cut(s)	1031
BsiSI	CCGG	3 cut(s)	201, 230, 1032
BslFI	GGGAC	1 cut(s)	33
BslI	CCNNNNNNNGG	8 cut(s)	75, 200, 289, 497, 719, 1000, 1265, 1298
BsmAI	GTCTC	1 cut(s)	661
BsmFI	GGGAC	1 cut(s)	33
BsmI	GAATGC	2 cut(s)	507, 989
BsnI	GGCC	6 cut(s)	5, 305, 365, 416, 437, 960
BsoBI	CYCGRG	1 cut(s)	1031
Bsp1286I	GDGCHC	2 cut(s)	618, 814
Bsp1407I	TGTACA	1 cut(s)	816
Bsp143I	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
Bsp1720I	GCTNAGC	1 cut(s)	792
BspANI	GGCC	6 cut(s)	5, 305, 365, 416, 437, 960
BspCNI	CTCAG	1 cut(s)	544
BspFNI	CGCG	3 cut(s)	317, 360, 984
BspLI	GGNNCC	3 cut(s)	136, 733, 1303
BspMI	ACCTGC	2 cut(s)	367, 596
BspPI	GGATC	6 cut(s)	37, 211, 279, 730, 865, 1190
BspQI	GCTCTTC	1 cut(s)	219
BspT107I	GGYRCC	2 cut(s)	134, 731
BspTI	CTTAAG	1 cut(s)	688
BsrBI	CCGCTC	2 cut(s)	493, 1247
BsrDI	GCAATG	1 cut(s)	1127
BsrGI	TGTACA	1 cut(s)	816
BsrI	ACTGG	3 cut(s)	189, 861, 897
BssECI	CCNNGG	6 cut(s)	366, 438, 682, 1030, 1031, 1305
BssMI	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
BssNI	GRCGYC	8 cut(s)	24, 120, 135, 171, 390, 480, 522, 801
BssT1I	CCWWGG	3 cut(s)	438, 682, 1305
Bst2UI	CCWGG	2 cut(s)	284, 367
Bst4CI	ACNGT	1 cut(s)	47
Bst6I	CTCTTC	4 cut(s)	219, 1163, 1314, 1403
BstACI	GRCGYC	8 cut(s)	24, 120, 135, 171, 390, 480, 522, 801
BstAFI	CTTAAG	1 cut(s)	688
BstAPI	GCANNNNNTGC	2 cut(s)	622, 671
BstAUI	TGTACA	1 cut(s)	816
BstC8I	GCNNGC	5 cut(s)	139, 418, 468, 1098, 1487
BstDEI	CTNAG	3 cut(s)	531, 792, 932
BstEII	GGTNACC	1 cut(s)	319
BstENI	CCTNNNNNAGG	1 cut(s)	1296
BstF5I	GGATG	3 cut(s)	836, 1049, 1330
BstFNI	CGCG	3 cut(s)	317, 360, 984
BstH2I	RGCGCY	1 cut(s)	138
BstHHI	GCGC	5 cut(s)	137, 360, 984, 1075, 1165
BstKTI	GATC	9 cut(s)	32, 206, 274, 537, 725, 873, 1185, 1221, 1447
BstMAI	GTCTC	1 cut(s)	661
BstMBI	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
BstNI	CCWGG	2 cut(s)	284, 367
BstPI	GGTNACC	1 cut(s)	319
BstSCI	CCNGG	4 cut(s)	282, 365, 1030, 1031
BstSLI	GKGCMC	1 cut(s)	618
BstUI	CGCG	3 cut(s)	317, 360, 984
BstV1I	GCAGC	3 cut(s)	116, 577, 795
BstV2I	GAAGAC	3 cut(s)	72, 450, 1263
BstX2I	RGATCY	4 cut(s)	29, 271, 1182, 1218
BstYI	RGATCY	4 cut(s)	29, 271, 1182, 1218
BsuRI	GGCC	6 cut(s)	5, 305, 365, 416, 437, 960
BtgZI	GCGATG	2 cut(s)	485, 999
BtrI	CACGTC	1 cut(s)	424
BtsCI	GGATG	3 cut(s)	836, 1049, 1330
BtsI	GCAGTG	1 cut(s)	982
BtsIMutI	CAGTG	2 cut(s)	890, 982
BveI	ACCTGC	2 cut(s)	367, 596
Cac8I	GCNNGC	5 cut(s)	139, 418, 468, 1098, 1487
CaiI	CAGNNNCTG	1 cut(s)	611
CfoI	GCGC	5 cut(s)	137, 360, 984, 1075, 1165
Cfr9I	CCCGGG	1 cut(s)	1031
CseI	GACGC	6 cut(s)	128, 179, 323, 398, 469, 809
Csp6I	GTAC	3 cut(s)	817, 1155, 1370
CviAII	CATG	4 cut(s)	901, 1102, 1333, 1393
CviQI	GTAC	3 cut(s)	817, 1155, 1370
DdeI	CTNAG	3 cut(s)	531, 792, 932
DinI	GGCGCC	1 cut(s)	136
DpnI	GATC	9 cut(s)	31, 205, 273, 536, 724, 872, 1184, 1220, 1446
DpnII	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
DraIII	CACNNNGTG	1 cut(s)	896
EaeI	YGGCCR	4 cut(s)	3, 363, 414, 435
Eam1104I	CTCTTC	4 cut(s)	219, 1163, 1314, 1403
EarI	CTCTTC	4 cut(s)	219, 1163, 1314, 1403
EciI	GGCGGA	4 cut(s)	79, 92, 305, 477
Eco130I	CCWWGG	3 cut(s)	438, 682, 1305
Eco24I	GRGCYC	1 cut(s)	814
Eco57I	CTGAAG	3 cut(s)	374, 647, 975
Eco88I	CYCGRG	1 cut(s)	1031
Eco91I	GGTNACC	1 cut(s)	319
EcoNI	CCTNNNNNAGG	1 cut(s)	1296
EcoO65I	GGTNACC	1 cut(s)	319
EcoRII	CCWGG	2 cut(s)	282, 365
EcoT14I	CCWWGG	3 cut(s)	438, 682, 1305
EcoT22I	ATGCAT	2 cut(s)	991, 1012
EcoT38I	GRGCYC	1 cut(s)	814
EgeI	GGCGCC	1 cut(s)	136
EheI	GGCGCC	1 cut(s)	136
ErhI	CCWWGG	3 cut(s)	438, 682, 1305
FaeI	CATG	4 cut(s)	904, 1105, 1336, 1396
FalI	AAGNNNNNCTT	2 cut(s)	1459, 1491
FaqI	GGGAC	1 cut(s)	33
FatI	CATG	4 cut(s)	900, 1101, 1332, 1392
FauI	CCCGC	5 cut(s)	77, 152, 193, 205, 1229
FokI	GGATG	3 cut(s)	823, 1036, 1337
FriOI	GRGCYC	1 cut(s)	814
FspBI	CTAG	2 cut(s)	41, 1298
GlaI	GCGC	5 cut(s)	136, 359, 983, 1074, 1164
HaeII	RGCGCY	1 cut(s)	138
HaeIII	GGCC	6 cut(s)	5, 305, 365, 416, 437, 960
HapII	CCGG	3 cut(s)	201, 230, 1032
HgaI	GACGC	6 cut(s)	128, 179, 323, 398, 469, 809
HhaI	GCGC	5 cut(s)	137, 360, 984, 1075, 1165
Hin1I	GRCGYC	8 cut(s)	24, 120, 135, 171, 390, 480, 522, 801
Hin1II	CATG	4 cut(s)	904, 1105, 1336, 1396
Hin6I	GCGC	5 cut(s)	135, 358, 982, 1073, 1163
HinP1I	GCGC	5 cut(s)	135, 358, 982, 1073, 1163
HinfI	GANTC	7 cut(s)	338, 446, 512, 638, 701, 918, 1025
HpaII	CCGG	3 cut(s)	201, 230, 1032
HphI	GGTGA	3 cut(s)	5, 331, 908
Hpy166II	GTNNAC	3 cut(s)	583, 616, 1204
Hpy188III	TCNNGA	4 cut(s)	397, 760, 953, 1040
Hpy8I	GTNNAC	3 cut(s)	583, 616, 1204
HpyAV	CCTTC	3 cut(s)	94, 229, 950
HpyCH4III	ACNGT	1 cut(s)	47
HpyCH4IV	ACGT	3 cut(s)	24, 423, 522
HpyCH4V	TGCA	8 cut(s)	376, 616, 674, 890, 926, 989, 1010, 1384
HpyF3I	CTNAG	3 cut(s)	531, 792, 932
HpySE526I	ACGT	3 cut(s)	24, 423, 522
Hsp92I	GRCGYC	8 cut(s)	24, 120, 135, 171, 390, 480, 522, 801
Hsp92II	CATG	4 cut(s)	904, 1105, 1336, 1396
HspAI	GCGC	5 cut(s)	135, 358, 982, 1073, 1163
KasI	GGCGCC	1 cut(s)	134
Kzo9I	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
LguI	GCTCTTC	1 cut(s)	219
LmnI	GCTCC	4 cut(s)	146, 349, 1244, 1261
Lsp1109I	GCAGC	3 cut(s)	116, 577, 795
LweI	GCATC	7 cut(s)	462, 517, 548, 576, 976, 997, 1058
MaeI	CTAG	2 cut(s)	41, 1298
MaeII	ACGT	3 cut(s)	24, 423, 522
MaeIII	GTNAC	4 cut(s)	11, 319, 896, 1455
MalI	GATC	9 cut(s)	31, 205, 273, 536, 724, 872, 1184, 1220, 1446
MbiI	CCGCTC	2 cut(s)	493, 1247
MboI	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
MflI	RGATCY	4 cut(s)	29, 271, 1182, 1218
MhlI	GDGCHC	2 cut(s)	618, 814
MlsI	TGGCCA	3 cut(s)	5, 365, 437
MluCI	AATT	9 cut(s)	669, 763, 777, 927, 1015, 1136, 1260, 1364, 1417
MluNI	TGGCCA	3 cut(s)	5, 365, 437
Mly113I	GGCGCC	1 cut(s)	135
MlyI	GAGTC	4 cut(s)	347, 440, 506, 1019
MmeI	TCCRAC	3 cut(s)	7, 279, 478
Mox20I	TGGCCA	3 cut(s)	5, 365, 437
Mph1103I	ATGCAT	2 cut(s)	991, 1012
MscI	TGGCCA	3 cut(s)	5, 365, 437
MseI	TTAA	6 cut(s)	110, 689, 750, 885, 1061, 1139
MslI	CAYNNNNRTG	2 cut(s)	905, 1061
Msp20I	TGGCCA	3 cut(s)	5, 365, 437
MspA1I	CMGCKG	1 cut(s)	129
MspCI	CTTAAG	1 cut(s)	688
MspI	CCGG	3 cut(s)	201, 230, 1032
MspR9I	CCNGG	4 cut(s)	284, 367, 1032, 1033
Mva1269I	GAATGC	2 cut(s)	507, 989
MvaI	CCWGG	2 cut(s)	284, 367
MvnI	CGCG	3 cut(s)	317, 360, 984
NarI	GGCGCC	1 cut(s)	135
NciI	CCSGG	2 cut(s)	1032, 1033
NdeII	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
NlaIII	CATG	4 cut(s)	904, 1105, 1336, 1396
NlaIV	GGNNCC	3 cut(s)	136, 733, 1303
NmeAIII	GCCGAG	3 cut(s)	331, 456, 543
NmuCI	GTSAC	4 cut(s)	11, 319, 896, 1455
NsiI	ATGCAT	2 cut(s)	991, 1012
PaqCI	CACCTGC	1 cut(s)	596
PciSI	GCTCTTC	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	3 cut(s)	393, 504, 513
PctI	GAATGC	2 cut(s)	507, 989
PfeI	GAWTC	3 cut(s)	638, 701, 918
PflFI	GACNNNGTC	2 cut(s)	122, 392
PflMI	CCANNNNNTGG	1 cut(s)	1265
PleI	GAGTC	4 cut(s)	346, 440, 506, 1019
PluTI	GGCGCC	1 cut(s)	138
PpsI	GAGTC	4 cut(s)	346, 440, 506, 1019
Psp6I	CCWGG	2 cut(s)	282, 365
PspEI	GGTNACC	1 cut(s)	319
PspGI	CCWGG	2 cut(s)	282, 365
PspN4I	GGNNCC	3 cut(s)	136, 733, 1303
PstNI	CAGNNNCTG	1 cut(s)	611
PsuI	RGATCY	4 cut(s)	29, 271, 1182, 1218
PsyI	GACNNNGTC	2 cut(s)	122, 392
PvuII	CAGCTG	1 cut(s)	129
RsaI	GTAC	3 cut(s)	818, 1156, 1371
RsaNI	GTAC	3 cut(s)	817, 1155, 1370
RseI	CAYNNNNRTG	2 cut(s)	905, 1061
SapI	GCTCTTC	1 cut(s)	219
SaqAI	TTAA	6 cut(s)	110, 689, 750, 885, 1061, 1139
Sau3AI	GATC	9 cut(s)	29, 203, 271, 534, 722, 870, 1182, 1218, 1444
SchI	GAGTC	4 cut(s)	347, 440, 506, 1019
ScrFI	CCNGG	4 cut(s)	284, 367, 1032, 1033
SduI	GDGCHC	2 cut(s)	618, 814
SfaNI	GCATC	7 cut(s)	462, 517, 548, 576, 976, 997, 1058
SfoI	GGCGCC	1 cut(s)	136
SmaI	CCCGGG	1 cut(s)	1033
SmiMI	CAYNNNNRTG	2 cut(s)	905, 1061
SmlI	CTYRAG	5 cut(s)	212, 688, 758, 805, 1465
SmoI	CTYRAG	5 cut(s)	212, 688, 758, 805, 1465
Sse9I	AATT	9 cut(s)	669, 763, 777, 927, 1015, 1136, 1260, 1364, 1417
SspDI	GGCGCC	1 cut(s)	134
SspMI	CTAG	2 cut(s)	41, 1298
StyD4I	CCNGG	4 cut(s)	282, 365, 1030, 1031
StyI	CCWWGG	3 cut(s)	438, 682, 1305
TaaI	ACNGT	1 cut(s)	47
TaiI	ACGT	3 cut(s)	27, 426, 525
TaqI	TCGA	7 cut(s)	117, 381, 396, 507, 525, 1134, 1178
TasI	AATT	9 cut(s)	669, 763, 777, 927, 1015, 1136, 1260, 1364, 1417
TatI	WGTACW	3 cut(s)	816, 1154, 1369
TauI	GCSGC	7 cut(s)	108, 135, 176, 179, 290, 416, 493
TfiI	GAWTC	3 cut(s)	638, 701, 918
Tru1I	TTAA	6 cut(s)	110, 689, 750, 885, 1061, 1139
Tru9I	TTAA	6 cut(s)	110, 689, 750, 885, 1061, 1139
TscAI	CASTG	2 cut(s)	897, 982
TseFI	GTSAC	4 cut(s)	11, 319, 896, 1455
TseI	GCWGC	3 cut(s)	129, 590, 783
Tsp45I	GTSAC	4 cut(s)	11, 319, 896, 1455
TspDTI	ATGAA	1 cut(s)	1263
TspGWI	ACGGA	1 cut(s)	1428
TspMI	CCCGGG	1 cut(s)	1031
TspRI	CASTG	2 cut(s)	897, 982
Tth111I	GACNNNGTC	2 cut(s)	122, 392
Van91I	CCANNNNNTGG	1 cut(s)	1265
Vha464I	CTTAAG	1 cut(s)	688
VneI	GTGCAC	1 cut(s)	614
XagI	CCTNNNNNAGG	1 cut(s)	1296
XapI	RAATTY	1 cut(s)	763
XcmI	CCANNNNNNNNNTGG	2 cut(s)	331, 1312
XmaI	CCCGGG	1 cut(s)	1031
XspI	CTAG	2 cut(s)	41, 1298
ZraI	GACGTC	2 cut(s)	25, 523
Zsp2I	ATGCAT	2 cut(s)	991, 1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.