Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0009437

Physical Location & Seq

Genomic Coordinates Forward (+)

9173673 .. 9175750

Gene Structure 2078 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011407

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGCCAAGTGTCACCGCAACGACGTCGGATCTATTGTCCTTGACCGTCCCTCCACCACCGCTCACTCCCGCCTCTGGTCTTCCTTCTCCGCCGCCTCGTTCCGCCGCTTAATCTTCGACGCCGTCAGCTGCGGCGCCAGCTCCCGCTACCGCCACCGACACGAAACCGACGCCGGCGCCCCTCCCGCTCCCGCTCCCGCTCCCGCCAGTCCTCCCGCCGGATCAACCCTCAAGCAATCCAAAGAGCCGGAGAATAAGGCAAAGCCGAAGCCCAAGTCCGAGAAGCTCTCGGATCTTCTGAACCTGGCGGCGGAATGGTCGGAGGCCGAGAGCGACGCGGTGACCAAGAAGAAAGTGGAGTCATTGGAGGAGCTGAAGCGCGTGGCCAGGGAGTTGCAGGTCGAAAACGACGCCGTCGAGAAGCGGAGAGAGGCGGCCAGCCACGTCAGACTTCTGGCTAAGGAAGACTCCGAAGCGAGAGCCACGCTTGCGATGCTCGGCGTCATTCCGCCGCTCGTCGGAATGCTCGACGACTCCGATGACGTCGATGCTCAGATCGCATCACTCTATGCTCTGCTCAATCTCGGCATCGGCAACGATGTGAACAAAGCTGCTATCCTCCAAGCGGGTGCTGTGCACAAAATGCTGAAGCTGATTGAATCTCCAAACTCATCAGTCTCCGAAGCAATAATTGCAAACTTCCTTGGCTTAAGTGCTTTGGATTCTAATAAACCCATTATTGGATCATCAGGTGCCATACCTTTCTTGCTTAAAATCCTCAAGAATTTGGACAACACAATTAGCAGCCAAGCTAAGCAAGACGCCTTGAGGGCTCTGTACAATCTTTCAATCTTCCCATCCAATGTTTCCTATATACTGGAAACCGATATGATCCCATTTTTCTTTAATGCACTGGGTGACATGGAAATGAGTGAAAGAATCCTTGCAATTCTAAGCAACATGGTATCTACTCCTGAAGGCCGAAAAGCAATCAGCAGTGTGTGCGATGCATTCCCTGTATTGGTTGATGCATTGAATTGGAACGACTCTCCCGGGTGTCAAGAGAAAGCATCCTACATTTTAATGGTAATGGCGCACAAGGCGTTTGGGGACAGGCAAGCTATGATTGAGGCAGGAGTGGTATCAGCATTGCTCGAATTAACGCTTTTGGGTAGTACATTGGCGCAGAAGAGAGCTTCGAGGATCTTGGAGTGTTTGAGAGTGGACAAAGGAAAACAGATCTCACAGAACTTTGGCGGGAGTGGAGCGGTTTCTGCTCCAATTTGTGGGTCTTCATCATCTTCTACAAACCCTAATCTAGGTTCCAAGGAGTGTTTGGAAGAGGATGAGGACATGATGAGTGATGAGAGGAAAGCAGTAAAGCAATTAGTACAACAGAGTTTGCAGAGCAACATGAGGAGGATTGTGAAGAGAGCCAATTTGCCCCAAGACTTTGTTCCGTCAGATCATTTCAAGTCACTCACCTCAAGTTCAACTTCAAAGAGCTTGCCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

506

Amino Acids

54.49

Weight (kDa)

6.49

Isoelectric Point (pI)

59.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_PUB	PF25598	130 - 394	6.8e-11	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	135 - 317	4.4e-12	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31890 AT4G31890 AT4G31890
fragaria_vesca	FvH4_2g40980 FvH4_2g40980
malus_domestica	MD08G1057900.v1.1 MD15G1038300.v1.1
prunus_persica	Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1
pyrus_communis	pycom08g04810 pycom15g03580
rosa_chinensis	RchiOBHm_Chr6g0299591
rosa_laevigata	RLG00000011407
rosa_multiflora	Rmu_sc0024600.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168530
rosa_rugosa	Rorug06G0290600 Rorug06G0290700
rosa_samantha	Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800
rosa_wichuraiana	Rw6G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	27, 546
Acc36I	ACCTGC	1 cut(s)	388
AccB1I	GGYRCC	3 cut(s)	134, 176, 752
AccB7I	CCANNNNNTGG	1 cut(s)	1286
AccBSI	CCGCTC	6 cut(s)	62, 188, 194, 200, 514, 1268
AccII	CGCG	2 cut(s)	338, 381
AclWI	GGATC	6 cut(s)	37, 229, 300, 751, 886, 1211
AcoI	YGGCCR	3 cut(s)	3, 384, 435
AcsI	RAATTY	1 cut(s)	784
AcuI	CTGAAG	3 cut(s)	395, 668, 996
AcyI	GRCGYC	9 cut(s)	24, 120, 135, 171, 177, 411, 501, 543, 822
AdeI	CACNNNGTG	1 cut(s)	917
AfaI	GTAC	3 cut(s)	839, 1177, 1392
AfiI	CCNNNNNNNGG	9 cut(s)	75, 218, 310, 518, 625, 740, 1021, 1286, 1319
AflII	CTTAAG	1 cut(s)	709
AgsI	TTSAA	6 cut(s)	659, 849, 1036, 1474, 1494, 1500
AjiI	CACGTC	1 cut(s)	445
AjnI	CCWGG	2 cut(s)	303, 386
AjuI	GAANNNNNNNTTGG	2 cut(s)	1440, 1472
Alw21I	GWGCWC	1 cut(s)	639
Alw26I	GTCTC	1 cut(s)	682
Alw44I	GTGCAC	1 cut(s)	635
AlwI	GGATC	6 cut(s)	37, 229, 300, 751, 886, 1211
Ama87I	CYCGRG	1 cut(s)	1052
AoxI	GGCC	5 cut(s)	3, 324, 384, 435, 979
ApaLI	GTGCAC	1 cut(s)	635
ApeKI	GCWGC	3 cut(s)	129, 611, 804
ApoI	RAATTY	1 cut(s)	784
ArsI	GACNNNNNNTTYG	2 cut(s)	260, 292
AspLEI	GCGC	5 cut(s)	137, 179, 381, 1096, 1186
AsuC2I	CCSGG	2 cut(s)	1053, 1054
AsuHPI	GGTGA	4 cut(s)	5, 352, 929, 1474
AvaI	CYCGRG	1 cut(s)	1052
BaeGI	GKGCMC	1 cut(s)	639
BalI	TGGCCA	2 cut(s)	5, 386
BanI	GGYRCC	3 cut(s)	134, 176, 752
BanII	GRGCYC	1 cut(s)	835
BbsI	GAAGAC	3 cut(s)	72, 471, 1284
Bbv12I	GWGCWC	1 cut(s)	639
BbvI	GCAGC	3 cut(s)	116, 598, 816
BccI	CCATC	1 cut(s)	865
BceAI	ACGGC	2 cut(s)	107, 398
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	2 cut(s)	305, 388
BcnI	CCSGG	2 cut(s)	1053, 1054
BcoDI	GTCTC	1 cut(s)	682
BfaI	CTAG	1 cut(s)	1319
BfoI	RGCGCY	2 cut(s)	138, 180
BfrI	CTTAAG	1 cut(s)	709
BfuAI	ACCTGC	1 cut(s)	388
BglI	GCCNNNNNGGC	1 cut(s)	830
BglII	AGATCT	1 cut(s)	1239
BisI	GCNGC	9 cut(s)	93, 106, 130, 133, 309, 435, 512, 612, 805
BlpI	GCTNAGC	1 cut(s)	813
BlsI	GCNGC	9 cut(s)	94, 107, 131, 134, 310, 436, 513, 613, 806
Bme1390I	CCNGG	4 cut(s)	305, 388, 1053, 1054
BmeT110I	CYCGRG	1 cut(s)	1052
BmgBI	CACGTC	1 cut(s)	445
BmiI	GGNNCC	4 cut(s)	136, 178, 754, 1324
BmrFI	CCNGG	4 cut(s)	305, 388, 1053, 1054
BmrI	ACTGGG	1 cut(s)	923
BmsI	GCATC	7 cut(s)	483, 538, 569, 597, 997, 1018, 1079
BmuI	ACTGGG	1 cut(s)	923
BpiI	GAAGAC	3 cut(s)	72, 471, 1284
BplI	GAGNNNNNCTC	2 cut(s)	272, 304
Bpu10I	CCTNAGC	1 cut(s)	459
Bpu1102I	GCTNAGC	1 cut(s)	813
BpuEI	CTTGAG	4 cut(s)	215, 764, 847, 1471
BpuMI	CCSGG	2 cut(s)	1053, 1054
BsaHI	GRCGYC	9 cut(s)	24, 120, 135, 171, 177, 411, 501, 543, 822
BsaJI	CCNNGG	4 cut(s)	387, 703, 1052, 1326
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	9 cut(s)	75, 218, 310, 518, 625, 740, 1021, 1286, 1319
Bse118I	RCCGGY	1 cut(s)	173
Bse1I	ACTGG	3 cut(s)	207, 882, 918
Bse3DI	GCAATG	1 cut(s)	1148
BseBI	CCWGG	2 cut(s)	305, 388
BseDI	CCNNGG	4 cut(s)	387, 703, 1052, 1326
BseGI	GGATG	3 cut(s)	857, 1070, 1351
BseLI	CCNNNNNNNGG	9 cut(s)	75, 218, 310, 518, 625, 740, 1021, 1286, 1319
BseMI	GCAATG	1 cut(s)	1148
BseMII	CTCAG	1 cut(s)	566
BseNI	ACTGG	3 cut(s)	207, 882, 918
BseRI	GAGGAG	2 cut(s)	383, 1432
BseSI	GKGCMC	1 cut(s)	639
BseXI	GCAGC	3 cut(s)	116, 598, 816
Bsh1236I	CGCG	2 cut(s)	338, 381
BshFI	GGCC	5 cut(s)	5, 326, 386, 437, 981
BshNI	GGYRCC	3 cut(s)	134, 176, 752
BsiHKAI	GWGCWC	1 cut(s)	639
BsiHKCI	CYCGRG	1 cut(s)	1052
BsiSI	CCGG	4 cut(s)	174, 219, 248, 1053
BslFI	GGGAC	2 cut(s)	33, 1124
BslI	CCNNNNNNNGG	9 cut(s)	75, 218, 310, 518, 625, 740, 1021, 1286, 1319
BsmAI	GTCTC	1 cut(s)	682
BsmFI	GGGAC	2 cut(s)	33, 1124
BsmI	GAATGC	2 cut(s)	528, 1010
BsnI	GGCC	5 cut(s)	5, 326, 386, 437, 981
BsoBI	CYCGRG	1 cut(s)	1052
Bsp1286I	GDGCHC	2 cut(s)	639, 835
Bsp1407I	TGTACA	1 cut(s)	837
Bsp143I	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
Bsp1720I	GCTNAGC	1 cut(s)	813
BspANI	GGCC	5 cut(s)	5, 326, 386, 437, 981
BspCNI	CTCAG	1 cut(s)	565
BspFNI	CGCG	2 cut(s)	338, 381
BspLI	GGNNCC	4 cut(s)	136, 178, 754, 1324
BspMI	ACCTGC	1 cut(s)	388
BspPI	GGATC	6 cut(s)	37, 229, 300, 751, 886, 1211
BspT107I	GGYRCC	3 cut(s)	134, 176, 752
BspTI	CTTAAG	1 cut(s)	709
BsrBI	CCGCTC	6 cut(s)	62, 188, 194, 200, 514, 1268
BsrDI	GCAATG	1 cut(s)	1148
BsrFI	RCCGGY	1 cut(s)	173
BsrGI	TGTACA	1 cut(s)	837
BsrI	ACTGG	3 cut(s)	207, 882, 918
BssAI	RCCGGY	1 cut(s)	173
BssECI	CCNNGG	4 cut(s)	387, 703, 1052, 1326
BssMI	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
BssNI	GRCGYC	9 cut(s)	24, 120, 135, 171, 177, 411, 501, 543, 822
BssT1I	CCWWGG	2 cut(s)	703, 1326
Bst2UI	CCWGG	2 cut(s)	305, 388
Bst4CI	ACNGT	1 cut(s)	47
Bst6I	CTCTTC	3 cut(s)	1184, 1335, 1424
BstACI	GRCGYC	9 cut(s)	24, 120, 135, 171, 177, 411, 501, 543, 822
BstAFI	CTTAAG	1 cut(s)	709
BstAPI	GCANNNNNTGC	3 cut(s)	643, 692, 1002
BstAUI	TGTACA	1 cut(s)	837
BstC8I	GCNNGC	6 cut(s)	139, 175, 439, 489, 1119, 1508
BstDEI	CTNAG	4 cut(s)	459, 552, 813, 953
BstEII	GGTNACC	1 cut(s)	340
BstENI	CCTNNNNNAGG	1 cut(s)	1317
BstF5I	GGATG	3 cut(s)	857, 1070, 1351
BstFNI	CGCG	2 cut(s)	338, 381
BstH2I	RGCGCY	2 cut(s)	138, 180
BstHHI	GCGC	5 cut(s)	137, 179, 381, 1096, 1186
BstKTI	GATC	9 cut(s)	32, 224, 295, 558, 746, 894, 1206, 1242, 1468
BstMAI	GTCTC	1 cut(s)	682
BstMBI	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
BstNI	CCWGG	2 cut(s)	305, 388
BstPI	GGTNACC	1 cut(s)	340
BstSCI	CCNGG	4 cut(s)	303, 386, 1051, 1052
BstSLI	GKGCMC	1 cut(s)	639
BstUI	CGCG	2 cut(s)	338, 381
BstV1I	GCAGC	3 cut(s)	116, 598, 816
BstV2I	GAAGAC	3 cut(s)	72, 471, 1284
BstX2I	RGATCY	4 cut(s)	29, 292, 1203, 1239
BstYI	RGATCY	4 cut(s)	29, 292, 1203, 1239
BsuRI	GGCC	5 cut(s)	5, 326, 386, 437, 981
BtgZI	GCGATG	2 cut(s)	506, 1020
BtrI	CACGTC	1 cut(s)	445
BtsCI	GGATG	3 cut(s)	857, 1070, 1351
BtsI	GCAGTG	1 cut(s)	1003
BtsIMutI	CAGTG	2 cut(s)	911, 1003
BveI	ACCTGC	1 cut(s)	388
Cac8I	GCNNGC	6 cut(s)	139, 175, 439, 489, 1119, 1508
CfoI	GCGC	5 cut(s)	137, 179, 381, 1096, 1186
Cfr10I	RCCGGY	1 cut(s)	173
Cfr9I	CCCGGG	1 cut(s)	1052
CseI	GACGC	6 cut(s)	128, 179, 344, 419, 490, 830
Csp6I	GTAC	3 cut(s)	838, 1176, 1391
CviAII	CATG	4 cut(s)	922, 961, 1354, 1414
CviQI	GTAC	3 cut(s)	838, 1176, 1391
DdeI	CTNAG	4 cut(s)	459, 552, 813, 953
DinI	GGCGCC	2 cut(s)	136, 178
DpnI	GATC	9 cut(s)	31, 223, 294, 557, 745, 893, 1205, 1241, 1467
DpnII	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
DraIII	CACNNNGTG	1 cut(s)	917
EaeI	YGGCCR	3 cut(s)	3, 384, 435
Eam1104I	CTCTTC	3 cut(s)	1184, 1335, 1424
EarI	CTCTTC	3 cut(s)	1184, 1335, 1424
EciI	GGCGGA	4 cut(s)	79, 92, 326, 498
Eco130I	CCWWGG	2 cut(s)	703, 1326
Eco24I	GRGCYC	1 cut(s)	835
Eco57I	CTGAAG	3 cut(s)	395, 668, 996
Eco88I	CYCGRG	1 cut(s)	1052
Eco91I	GGTNACC	1 cut(s)	340
EcoNI	CCTNNNNNAGG	1 cut(s)	1317
EcoO65I	GGTNACC	1 cut(s)	340
EcoRII	CCWGG	2 cut(s)	303, 386
EcoT14I	CCWWGG	2 cut(s)	703, 1326
EcoT22I	ATGCAT	2 cut(s)	1012, 1033
EcoT38I	GRGCYC	1 cut(s)	835
EgeI	GGCGCC	2 cut(s)	136, 178
EheI	GGCGCC	2 cut(s)	136, 178
ErhI	CCWWGG	2 cut(s)	703, 1326
FaeI	CATG	4 cut(s)	925, 964, 1357, 1417
FalI	AAGNNNNNCTT	2 cut(s)	1480, 1512
FaqI	GGGAC	2 cut(s)	33, 1124
FatI	CATG	4 cut(s)	921, 960, 1353, 1413
FauI	CCCGC	9 cut(s)	77, 152, 193, 199, 205, 211, 223, 619, 1250
Fnu4HI	GCNGC	9 cut(s)	93, 106, 130, 133, 309, 435, 512, 612, 805
FokI	GGATG	3 cut(s)	844, 1057, 1358
FriOI	GRGCYC	1 cut(s)	835
Fsp4HI	GCNGC	9 cut(s)	93, 106, 130, 133, 309, 435, 512, 612, 805
FspBI	CTAG	1 cut(s)	1319
GlaI	GCGC	5 cut(s)	136, 178, 380, 1095, 1185
GluI	GCNGC	9 cut(s)	93, 106, 130, 133, 309, 435, 512, 612, 805
HaeII	RGCGCY	2 cut(s)	138, 180
HaeIII	GGCC	5 cut(s)	5, 326, 386, 437, 981
HapII	CCGG	4 cut(s)	174, 219, 248, 1053
HgaI	GACGC	6 cut(s)	128, 179, 344, 419, 490, 830
HhaI	GCGC	5 cut(s)	137, 179, 381, 1096, 1186
Hin1I	GRCGYC	9 cut(s)	24, 120, 135, 171, 177, 411, 501, 543, 822
Hin1II	CATG	4 cut(s)	925, 964, 1357, 1417
Hin6I	GCGC	5 cut(s)	135, 177, 379, 1094, 1184
HinP1I	GCGC	5 cut(s)	135, 177, 379, 1094, 1184
HinfI	GANTC	7 cut(s)	359, 467, 533, 659, 722, 939, 1046
HpaII	CCGG	4 cut(s)	174, 219, 248, 1053
HphI	GGTGA	4 cut(s)	5, 352, 929, 1474
Hpy166II	GTNNAC	3 cut(s)	604, 637, 1225
Hpy188III	TCNNGA	4 cut(s)	418, 781, 974, 1061
Hpy8I	GTNNAC	3 cut(s)	604, 637, 1225
HpyAV	CCTTC	2 cut(s)	94, 971
HpyCH4III	ACNGT	1 cut(s)	47
HpyCH4IV	ACGT	3 cut(s)	24, 444, 543
HpyCH4V	TGCA	8 cut(s)	397, 637, 695, 911, 947, 1010, 1031, 1405
HpyF3I	CTNAG	4 cut(s)	459, 552, 813, 953
HpySE526I	ACGT	3 cut(s)	24, 444, 543
Hsp92I	GRCGYC	9 cut(s)	24, 120, 135, 171, 177, 411, 501, 543, 822
Hsp92II	CATG	4 cut(s)	925, 964, 1357, 1417
HspAI	GCGC	5 cut(s)	135, 177, 379, 1094, 1184
KasI	GGCGCC	2 cut(s)	134, 176
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Kzo9I	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
LmnI	GCTCC	7 cut(s)	146, 193, 199, 205, 370, 1265, 1282
Lsp1109I	GCAGC	3 cut(s)	116, 598, 816
LweI	GCATC	7 cut(s)	483, 538, 569, 597, 997, 1018, 1079
MaeI	CTAG	1 cut(s)	1319
MaeII	ACGT	3 cut(s)	24, 444, 543
MaeIII	GTNAC	4 cut(s)	11, 340, 917, 1476
MalI	GATC	9 cut(s)	31, 223, 294, 557, 745, 893, 1205, 1241, 1467
MbiI	CCGCTC	6 cut(s)	62, 188, 194, 200, 514, 1268
MboI	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
MflI	RGATCY	4 cut(s)	29, 292, 1203, 1239
MhlI	GDGCHC	2 cut(s)	639, 835
MlsI	TGGCCA	2 cut(s)	5, 386
MluCI	AATT	9 cut(s)	690, 784, 798, 948, 1036, 1157, 1281, 1385, 1438
MluNI	TGGCCA	2 cut(s)	5, 386
Mly113I	GGCGCC	2 cut(s)	135, 177
MlyI	GAGTC	4 cut(s)	368, 461, 527, 1040
MmeI	TCCRAC	3 cut(s)	7, 300, 499
Mox20I	TGGCCA	2 cut(s)	5, 386
Mph1103I	ATGCAT	2 cut(s)	1012, 1033
MreI	CGCCGGCG	1 cut(s)	173
MroNI	GCCGGC	1 cut(s)	173
MscI	TGGCCA	2 cut(s)	5, 386
MseI	TTAA	6 cut(s)	110, 710, 771, 906, 1082, 1160
MslI	CAYNNNNRTG	2 cut(s)	926, 1082
Msp20I	TGGCCA	2 cut(s)	5, 386
MspA1I	CMGCKG	1 cut(s)	129
MspCI	CTTAAG	1 cut(s)	709
MspI	CCGG	4 cut(s)	174, 219, 248, 1053
MspR9I	CCNGG	4 cut(s)	305, 388, 1053, 1054
Mva1269I	GAATGC	2 cut(s)	528, 1010
MvaI	CCWGG	2 cut(s)	305, 388
MvnI	CGCG	2 cut(s)	338, 381
NaeI	GCCGGC	1 cut(s)	175
NarI	GGCGCC	2 cut(s)	135, 177
NciI	CCSGG	2 cut(s)	1053, 1054
NdeII	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
NgoMIV	GCCGGC	1 cut(s)	173
NlaIII	CATG	4 cut(s)	925, 964, 1357, 1417
NlaIV	GGNNCC	4 cut(s)	136, 178, 754, 1324
NmeAIII	GCCGAG	3 cut(s)	352, 477, 564
NmuCI	GTSAC	4 cut(s)	11, 340, 917, 1476
NsiI	ATGCAT	2 cut(s)	1012, 1033
PcsI	WCGNNNNNNNCGW	3 cut(s)	414, 525, 534
PctI	GAATGC	2 cut(s)	528, 1010
PdiI	GCCGGC	1 cut(s)	175
PfeI	GAWTC	3 cut(s)	659, 722, 939
PflFI	GACNNNGTC	2 cut(s)	122, 413
PflMI	CCANNNNNTGG	1 cut(s)	1286
PkrI	GCNGC	9 cut(s)	94, 107, 131, 134, 310, 436, 513, 613, 806
PleI	GAGTC	4 cut(s)	367, 461, 527, 1040
PluTI	GGCGCC	2 cut(s)	138, 180
PpsI	GAGTC	4 cut(s)	367, 461, 527, 1040
Psp6I	CCWGG	2 cut(s)	303, 386
PspEI	GGTNACC	1 cut(s)	340
PspGI	CCWGG	2 cut(s)	303, 386
PspN4I	GGNNCC	4 cut(s)	136, 178, 754, 1324
PsuI	RGATCY	4 cut(s)	29, 292, 1203, 1239
PsyI	GACNNNGTC	2 cut(s)	122, 413
PvuII	CAGCTG	1 cut(s)	129
RsaI	GTAC	3 cut(s)	839, 1177, 1392
RsaNI	GTAC	3 cut(s)	838, 1176, 1391
RseI	CAYNNNNRTG	2 cut(s)	926, 1082
SaqAI	TTAA	6 cut(s)	110, 710, 771, 906, 1082, 1160
SatI	GCNGC	9 cut(s)	93, 106, 130, 133, 309, 435, 512, 612, 805
Sau3AI	GATC	9 cut(s)	29, 221, 292, 555, 743, 891, 1203, 1239, 1465
SchI	GAGTC	4 cut(s)	368, 461, 527, 1040
ScrFI	CCNGG	4 cut(s)	305, 388, 1053, 1054
SduI	GDGCHC	2 cut(s)	639, 835
SfaNI	GCATC	7 cut(s)	483, 538, 569, 597, 997, 1018, 1079
SfoI	GGCGCC	2 cut(s)	136, 178
SgrAI	CRCCGGYG	1 cut(s)	173
SmaI	CCCGGG	1 cut(s)	1054
SmiMI	CAYNNNNRTG	2 cut(s)	926, 1082
SmlI	CTYRAG	5 cut(s)	230, 709, 779, 826, 1486
SmoI	CTYRAG	5 cut(s)	230, 709, 779, 826, 1486
Sse9I	AATT	9 cut(s)	690, 784, 798, 948, 1036, 1157, 1281, 1385, 1438
SspDI	GGCGCC	2 cut(s)	134, 176
SspMI	CTAG	1 cut(s)	1319
StyD4I	CCNGG	4 cut(s)	303, 386, 1051, 1052
StyI	CCWWGG	2 cut(s)	703, 1326
TaaI	ACNGT	1 cut(s)	47
TaiI	ACGT	3 cut(s)	27, 447, 546
TaqI	TCGA	7 cut(s)	117, 402, 417, 528, 546, 1155, 1199
TasI	AATT	9 cut(s)	690, 784, 798, 948, 1036, 1157, 1281, 1385, 1438
TatI	WGTACW	3 cut(s)	837, 1175, 1390
TauI	GCSGC	6 cut(s)	95, 108, 135, 311, 437, 514
TfiI	GAWTC	3 cut(s)	659, 722, 939
Tru1I	TTAA	6 cut(s)	110, 710, 771, 906, 1082, 1160
Tru9I	TTAA	6 cut(s)	110, 710, 771, 906, 1082, 1160
TscAI	CASTG	2 cut(s)	918, 1003
TseFI	GTSAC	4 cut(s)	11, 340, 917, 1476
TseI	GCWGC	3 cut(s)	129, 611, 804
Tsp45I	GTSAC	4 cut(s)	11, 340, 917, 1476
TspDTI	ATGAA	1 cut(s)	1284
TspGWI	ACGGA	1 cut(s)	1449
TspMI	CCCGGG	1 cut(s)	1052
TspRI	CASTG	2 cut(s)	918, 1003
Tth111I	GACNNNGTC	2 cut(s)	122, 413
Van91I	CCANNNNNTGG	1 cut(s)	1286
Vha464I	CTTAAG	1 cut(s)	709
VneI	GTGCAC	1 cut(s)	635
XagI	CCTNNNNNAGG	1 cut(s)	1317
XapI	RAATTY	1 cut(s)	784
XcmI	CCANNNNNNNNNTGG	2 cut(s)	352, 1333
XmaI	CCCGGG	1 cut(s)	1052
XspI	CTAG	1 cut(s)	1319
ZraI	GACGTC	2 cut(s)	25, 544
Zsp2I	ATGCAT	2 cut(s)	1012, 1033

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.