Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009437

Physical Location & Seq

Genomic Coordinates Forward (+)

2672283 .. 2674975

Gene Structure 2693 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1038300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCCAAGTGTCACCGAAACGATGTCGGATCCGTCGTCCTAGACCGCCCAACCACCACCTCCTCCGGCCATTCCCGGCTCTGGACCTCCTTATCCGGCGCCTCATTCCGCCGGAAAATATTCGACGCCATCAGCTGCGGCGGGAGCTCCCGATACCGCCACCGCGACGACGACAACGACGCTGCTCCGATCAGTCCTCCGGCTCCTCCGGCCACCGAAGCCACCACCATTAGATCGGCGACGACGCATTCGGAGCAGAAAGTTAATGAGGCGGAGAAGGCTGAGAAGCCGAAAGTGAAGTCCGAGAAGCTCTCGGATCTTCTGAACCTCGCGGAGTTTTCGGAAGCGGAAAACGAATCCGCGACGAAGAAGAAGGTGGAGGAGCTGGAGGAGCTCAAGCGAGTGGCGAAGGACCTGCAGGCTGAAGACGACACGGCGAAGAGGAAGGAGGCGGCGAGCAAGGTGAGATTGCACGCCAAGGAAGAATCGGAGGCCAGAGCCACGCTCGCGATGCTCGGCGTCATTCCTCCGCTCGTCGCCTTGCTCGACTCCGACGACGTCGTTTCTCAGATCGCGTCGCTCTACGCTCTGCTCAATCTCGGGATCGGAAACGACGTGAACAAAGCTGCTATTCTCCAAGCAGGGGCTGTGCACAAAATGCTGAAGCTAATTGAATCCCCAAATCCTCCAGACCCATCAGTCTCAGAAGCAATAATTGCGAATTTCCTCGGCTTAAGCGCGTTGGACTCGAATAAACCGATCATTGGAGCTTCGGGCGCCATACCCTTCTTGGTTAAAACCCTCAAGAATTCTGACAATGCAAGTAGCTGCCAAGCCAAGCAAGACGCCCTGAGAGCGCTCTACAATCTCTCGATCTTCCCGTCCAATATTTCGTTCATATTGGAAACGGATTTGATCCCCTTTTTCTTGAAATCGCTCGGAGACATGGAAGTGAGCGAAAGAATCCTTGCAGTTCTAAGCAACCTGGTTTCCATCCCCGAAGGTCGTAAGGCAATTAGCAGCATAAAGGATGCATTTCCAATATTGGTAGATGCCTTGAATTGGAACGACTCGCCGGGGTGCCAAGAGAAGGCATCGTACATTTTGATGGTAATGGCACACAAGGCGTTCGGGGATAGGCAAGCCATGATCGAGGCAGGAATGGTTTCAGCACTGCTCGAATTGACGCTTTTGGGTAGTACATTGGCGCAGAAGAGAGCCTCGAGGATCTTGGAGTGTTTGAGAGTGGATAAAGGAAAGCAGGTTTCGCAGAGCTTCGGCGGGAGTAGTATGGGGGCGGCAGTTTCCGCTCCCATTTGCGGGTCTTCCTCGTCTTCTTCAAACCCGAATGTGGGTTCCAAGGAGCGTATGCAGGAGGAGGAGGACATGATGAGCGAGGAGAAGAAAGCCGTGAAGCAATTAGTCCAACAGAGTTTGCAAAACAACATGAGGAGGATTGTGAAGAGGGCGAATCTGCCCCAAGATTTCGTGCCGTCGGATCATTTCAAGTCGCTCACCTCGATTTCAACTTCGAAGAGCTTGCCGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

517

Amino Acids

55.7

Weight (kDa)

6.74

Isoelectric Point (pI)

55.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	126 - 322	1.5e-09	ARMC5
ARM_PUB	PF25598	132 - 402	1e-10	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31890 AT4G31890 AT4G31890
fragaria_vesca	FvH4_2g40980 FvH4_2g40980
malus_domestica	MD08G1057900.v1.1 MD15G1038300.v1.1
prunus_persica	Prupe.1G392300_v2.0.a1 Prupe.1G392300_v2.0.a1
pyrus_communis	pycom08g04810 pycom15g03580
rosa_chinensis	RchiOBHm_Chr6g0299591
rosa_laevigata	RLG00000011407
rosa_multiflora	Rmu_sc0024600.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168530
rosa_rugosa	Rorug06G0290600 Rorug06G0290700
rosa_samantha	Rh6AG401600 Rh6BG410000 Rh6CG415500 Rh6DG402800
rosa_wichuraiana	Rw6G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	698
AatII	GACGTC	1 cut(s)	561
AbsI	CCTCGAGG	1 cut(s)	1222
Acc36I	ACCTGC	2 cut(s)	423, 1252
AccB1I	GGYRCC	3 cut(s)	98, 776, 1080
AccBSI	CCGCTC	2 cut(s)	532, 1310
AccII	CGCG	6 cut(s)	165, 332, 362, 509, 575, 740
AclWI	GGATC	7 cut(s)	24, 37, 324, 611, 910, 1235, 1506
AcoI	YGGCCR	3 cut(s)	3, 67, 210
AcsI	RAATTY	2 cut(s)	721, 808
AcuI	CTGAAG	2 cut(s)	444, 683
AcyI	GRCGYC	6 cut(s)	99, 126, 519, 558, 777, 846
AfaI	GTAC	2 cut(s)	1100, 1201
AfeI	AGCGCT	1 cut(s)	858
AfiI	CCNNNNNNNGG	9 cut(s)	81, 643, 764, 1062, 1090, 1319, 1320, 1351, 1352
AflII	CTTAAG	1 cut(s)	733
AgsI	TTSAA	6 cut(s)	674, 931, 1060, 1341, 1507, 1527
AjiI	CACGTC	1 cut(s)	616
AjnI	CCWGG	1 cut(s)	984
AjuI	GAANNNNNNNTTGG	2 cut(s)	878, 910
Alw21I	GWGCWC	3 cut(s)	149, 396, 654
Alw26I	GTCTC	2 cut(s)	706, 936
Alw44I	GTGCAC	1 cut(s)	650
AlwI	GGATC	7 cut(s)	24, 37, 324, 611, 910, 1235, 1506
AlwNI	CAGNNNCTG	1 cut(s)	647
Ama87I	CYCGRG	2 cut(s)	599, 1222
Aor51HI	AGCGCT	1 cut(s)	858
AoxI	GGCC	4 cut(s)	3, 67, 210, 492
ApaLI	GTGCAC	1 cut(s)	650
ApeKI	GCWGC	5 cut(s)	135, 182, 626, 828, 1020
ApoI	RAATTY	2 cut(s)	721, 808
ArsI	GACNNNNNNTTYG	4 cut(s)	232, 264, 284, 316
Asp700I	GAANNNNTTC	2 cut(s)	119, 1165
AspLEI	GCGC	5 cut(s)	101, 740, 779, 859, 1210
AspS9I	GGNCC	2 cut(s)	84, 412
AsuC2I	CCSGG	2 cut(s)	76, 1077
AsuHPI	GGTGA	3 cut(s)	5, 475, 1507
AsuII	TTCGAA	1 cut(s)	1532
AvaI	CYCGRG	2 cut(s)	599, 1222
AvaII	GGWCC	2 cut(s)	84, 412
BaeGI	GKGCMC	1 cut(s)	654
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	29
BanI	GGYRCC	3 cut(s)	98, 776, 1080
BanII	GRGCYC	2 cut(s)	149, 396
BarI	GAAGNNNNNNTAC	2 cut(s)	1082, 1114
BbsI	GAAGAC	3 cut(s)	432, 1317, 1326
Bbv12I	GWGCWC	3 cut(s)	149, 396, 654
BbvI	GCAGC	5 cut(s)	122, 169, 613, 815, 1032
BccI	CCATC	4 cut(s)	137, 703, 1001, 1102
BceAI	ACGGC	4 cut(s)	450, 1394, 1477, 1528
BcgI	CGANNNNNNTGC	3 cut(s)	397, 431, 1522
BciT130I	CCWGG	1 cut(s)	986
BcnI	CCSGG	2 cut(s)	76, 1077
BcoDI	GTCTC	2 cut(s)	706, 936
BfaI	CTAG	1 cut(s)	41
BfmI	CTRYAG	1 cut(s)	416
BfoI	RGCGCY	3 cut(s)	102, 780, 860
BfrI	CTTAAG	1 cut(s)	733
BfuAI	ACCTGC	2 cut(s)	423, 1252
BisI	GCNGC	8 cut(s)	136, 139, 183, 453, 627, 829, 1021, 1299
BlsI	GCNGC	8 cut(s)	137, 140, 184, 454, 628, 830, 1022, 1300
Bme1390I	CCNGG	3 cut(s)	76, 986, 1077
Bme18I	GGWCC	2 cut(s)	84, 412
BmeT110I	CYCGRG	2 cut(s)	599, 1222
BmgBI	CACGTC	1 cut(s)	616
BmgT120I	GGNCC	2 cut(s)	84, 412
BmiI	GGNNCC	6 cut(s)	31, 100, 204, 778, 1082, 1357
BmrFI	CCNGG	3 cut(s)	76, 986, 1077
BmsI	GCATC	4 cut(s)	501, 1021, 1042, 1103
BpiI	GAAGAC	3 cut(s)	432, 1317, 1326
BplI	GAGNNNNNCTC	4 cut(s)	296, 328, 489, 521
BpmI	CTGGAG	2 cut(s)	407, 672
Bpu14I	TTCGAA	1 cut(s)	1532
BpuEI	CTTGAG	2 cut(s)	380, 788
BpuMI	CCSGG	2 cut(s)	76, 1077
BsaHI	GRCGYC	6 cut(s)	99, 126, 519, 558, 777, 846
BsaJI	CCNNGG	4 cut(s)	477, 727, 1076, 1359
Bsc4I	CCNNNNNNNGG	9 cut(s)	81, 643, 764, 1062, 1090, 1319, 1320, 1351, 1352
BseBI	CCWGG	1 cut(s)	986
BseDI	CCNNGG	4 cut(s)	477, 727, 1076, 1359
BseGI	GGATG	2 cut(s)	993, 1036
BseLI	CCNNNNNNNGG	9 cut(s)	81, 643, 764, 1062, 1090, 1319, 1320, 1351, 1352
BseMII	CTCAG	4 cut(s)	273, 581, 717, 842
BseRI	GAGGAG	8 cut(s)	52, 195, 395, 404, 1391, 1394, 1412, 1465
BseSI	GKGCMC	1 cut(s)	654
BseXI	GCAGC	5 cut(s)	122, 169, 613, 815, 1032
Bsh1236I	CGCG	6 cut(s)	165, 332, 362, 509, 575, 740
BshFI	GGCC	4 cut(s)	5, 69, 212, 494
BshNI	GGYRCC	3 cut(s)	98, 776, 1080
BsiHKAI	GWGCWC	3 cut(s)	149, 396, 654
BsiHKCI	CYCGRG	2 cut(s)	599, 1222
BsiSI	CCGG	7 cut(s)	66, 76, 96, 112, 200, 209, 1076
BslI	CCNNNNNNNGG	9 cut(s)	81, 643, 764, 1062, 1090, 1319, 1320, 1351, 1352
BsmAI	GTCTC	2 cut(s)	706, 936
BsmI	GAATGC	1 cut(s)	247
BsnI	GGCC	4 cut(s)	5, 69, 212, 494
BsoBI	CYCGRG	2 cut(s)	599, 1222
Bsp119I	TTCGAA	1 cut(s)	1532
Bsp1286I	GDGCHC	3 cut(s)	149, 396, 654
Bsp68I	TCGCGA	1 cut(s)	509
BspANI	GGCC	4 cut(s)	5, 69, 212, 494
BspCNI	CTCAG	4 cut(s)	274, 580, 716, 843
BspFNI	CGCG	6 cut(s)	165, 332, 362, 509, 575, 740
BspLI	GGNNCC	6 cut(s)	31, 100, 204, 778, 1082, 1357
BspMAI	CTGCAG	1 cut(s)	420
BspMI	ACCTGC	2 cut(s)	423, 1252
BspPI	GGATC	7 cut(s)	24, 37, 324, 611, 910, 1235, 1506
BspQI	GCTCTTC	1 cut(s)	1529
BspT104I	TTCGAA	1 cut(s)	1532
BspT107I	GGYRCC	3 cut(s)	98, 776, 1080
BspTI	CTTAAG	1 cut(s)	733
BsrBI	CCGCTC	2 cut(s)	532, 1310
BssECI	CCNNGG	4 cut(s)	477, 727, 1076, 1359
BssNI	GRCGYC	6 cut(s)	99, 126, 519, 558, 777, 846
BssT1I	CCWWGG	2 cut(s)	477, 1359
Bst2UI	CCWGG	1 cut(s)	986
Bst6I	CTCTTC	4 cut(s)	434, 1208, 1457, 1529
BstACI	GRCGYC	6 cut(s)	99, 126, 519, 558, 777, 846
BstAFI	CTTAAG	1 cut(s)	733
BstAPI	GCANNNNNTGC	2 cut(s)	658, 716
BstBI	TTCGAA	1 cut(s)	1532
BstC8I	GCNNGC	6 cut(s)	420, 457, 474, 507, 1143, 1541
BstDEI	CTNAG	5 cut(s)	282, 567, 703, 851, 977
BstF5I	GGATG	2 cut(s)	993, 1036
BstFNI	CGCG	6 cut(s)	165, 332, 362, 509, 575, 740
BstH2I	RGCGCY	3 cut(s)	102, 780, 860
BstHHI	GCGC	5 cut(s)	101, 740, 779, 859, 1210
BstMAI	GTCTC	2 cut(s)	706, 936
BstNI	CCWGG	1 cut(s)	986
BstSCI	CCNGG	3 cut(s)	74, 984, 1075
BstSFI	CTRYAG	1 cut(s)	416
BstSLI	GKGCMC	1 cut(s)	654
BstUI	CGCG	6 cut(s)	165, 332, 362, 509, 575, 740
BstV1I	GCAGC	5 cut(s)	122, 169, 613, 815, 1032
BstV2I	GAAGAC	3 cut(s)	432, 1317, 1326
BstX2I	RGATCY	3 cut(s)	29, 316, 1227
BstYI	RGATCY	3 cut(s)	29, 316, 1227
BsuRI	GGCC	4 cut(s)	5, 69, 212, 494
BtgZI	GCGATG	1 cut(s)	524
BtrI	CACGTC	1 cut(s)	616
BtsCI	GGATG	2 cut(s)	993, 1036
BtsI	GCAGTG	1 cut(s)	1172
BtsIMutI	CAGTG	1 cut(s)	1172
BtuMI	TCGCGA	1 cut(s)	509
BveI	ACCTGC	2 cut(s)	423, 1252
Cac8I	GCNNGC	6 cut(s)	420, 457, 474, 507, 1143, 1541
CaiI	CAGNNNCTG	1 cut(s)	647
CfoI	GCGC	5 cut(s)	101, 740, 779, 859, 1210
Cfr13I	GGNCC	2 cut(s)	84, 412
CseI	GACGC	7 cut(s)	134, 188, 253, 508, 564, 854, 1195
CsiI	ACCWGGT	1 cut(s)	984
Csp6I	GTAC	2 cut(s)	1099, 1200
CviAII	CATG	4 cut(s)	946, 1147, 1387, 1447
CviQI	GTAC	2 cut(s)	1099, 1200
DdeI	CTNAG	5 cut(s)	282, 567, 703, 851, 977
DinI	GGCGCC	2 cut(s)	100, 778
DrdI	GACNNNNNNGTC	1 cut(s)	698
DseDI	GACNNNNNNGTC	1 cut(s)	698
EaeI	YGGCCR	3 cut(s)	3, 67, 210
Eam1104I	CTCTTC	4 cut(s)	434, 1208, 1457, 1529
EarI	CTCTTC	4 cut(s)	434, 1208, 1457, 1529
EciI	GGCGGA	2 cut(s)	98, 287
Ecl136II	GAGCTC	2 cut(s)	147, 394
Eco130I	CCWWGG	2 cut(s)	477, 1359
Eco24I	GRGCYC	2 cut(s)	149, 396
Eco47I	GGWCC	2 cut(s)	84, 412
Eco47III	AGCGCT	1 cut(s)	858
Eco53kI	GAGCTC	2 cut(s)	147, 394
Eco57I	CTGAAG	2 cut(s)	444, 683
Eco88I	CYCGRG	2 cut(s)	599, 1222
EcoICRI	GAGCTC	2 cut(s)	147, 394
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRI	GAATTC	1 cut(s)	808
EcoRII	CCWGG	1 cut(s)	984
EcoT14I	CCWWGG	2 cut(s)	477, 1359
EcoT22I	ATGCAT	1 cut(s)	1036
EcoT38I	GRGCYC	2 cut(s)	149, 396
EgeI	GGCGCC	2 cut(s)	100, 778
EheI	GGCGCC	2 cut(s)	100, 778
ErhI	CCWWGG	2 cut(s)	477, 1359
FaeI	CATG	4 cut(s)	949, 1150, 1390, 1450
FaiI	YATR	9 cut(s)	782, 899, 947, 1025, 1148, 1292, 1370, 1388, 1448
FatI	CATG	4 cut(s)	945, 1146, 1386, 1446
FauI	CCCGC	3 cut(s)	134, 1274, 1313
Fnu4HI	GCNGC	8 cut(s)	136, 139, 183, 453, 627, 829, 1021, 1299
FokI	GGATG	2 cut(s)	980, 1043
FriOI	GRGCYC	2 cut(s)	149, 396
Fsp4HI	GCNGC	8 cut(s)	136, 139, 183, 453, 627, 829, 1021, 1299
FspBI	CTAG	1 cut(s)	41
GlaI	GCGC	5 cut(s)	100, 739, 778, 858, 1209
GluI	GCNGC	8 cut(s)	136, 139, 183, 453, 627, 829, 1021, 1299
GsuI	CTGGAG	2 cut(s)	407, 672
HaeII	RGCGCY	3 cut(s)	102, 780, 860
HaeIII	GGCC	4 cut(s)	5, 69, 212, 494
HapII	CCGG	7 cut(s)	66, 76, 96, 112, 200, 209, 1076
HgaI	GACGC	7 cut(s)	134, 188, 253, 508, 564, 854, 1195
HhaI	GCGC	5 cut(s)	101, 740, 779, 859, 1210
Hin1I	GRCGYC	6 cut(s)	99, 126, 519, 558, 777, 846
Hin1II	CATG	4 cut(s)	949, 1150, 1390, 1450
Hin6I	GCGC	5 cut(s)	99, 738, 777, 857, 1208
HinP1I	GCGC	5 cut(s)	99, 738, 777, 857, 1208
HinfI	GANTC	8 cut(s)	356, 485, 548, 674, 746, 963, 1070, 1471
HpaII	CCGG	7 cut(s)	66, 76, 96, 112, 200, 209, 1076
HphI	GGTGA	3 cut(s)	5, 475, 1507
Hpy166II	GTNNAC	2 cut(s)	619, 652
Hpy188III	TCNNGA	8 cut(s)	82, 150, 508, 601, 689, 805, 871, 928
Hpy8I	GTNNAC	2 cut(s)	619, 652
HpyAV	CCTTC	7 cut(s)	271, 367, 403, 439, 796, 995, 1084
HpyCH4IV	ACGT	2 cut(s)	558, 615
HpyCH4V	TGCA	8 cut(s)	418, 472, 652, 821, 971, 1034, 1372, 1438
HpyF3I	CTNAG	5 cut(s)	282, 567, 703, 851, 977
HpySE526I	ACGT	2 cut(s)	558, 615
Hsp92I	GRCGYC	6 cut(s)	99, 126, 519, 558, 777, 846
Hsp92II	CATG	4 cut(s)	949, 1150, 1390, 1450
HspAI	GCGC	5 cut(s)	99, 738, 777, 857, 1208
KasI	GGCGCC	2 cut(s)	98, 776
LguI	GCTCTTC	1 cut(s)	1529
Lsp1109I	GCAGC	5 cut(s)	122, 169, 613, 815, 1032
LweI	GCATC	4 cut(s)	501, 1021, 1042, 1103
MabI	ACCWGGT	1 cut(s)	984
MaeI	CTAG	1 cut(s)	41
MaeII	ACGT	2 cut(s)	558, 615
MaeIII	GTNAC	1 cut(s)	11
MbiI	CCGCTC	2 cut(s)	532, 1310
MflI	RGATCY	3 cut(s)	29, 316, 1227
MhlI	GDGCHC	3 cut(s)	149, 396, 654
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	669, 714, 721, 808, 1014, 1060, 1181, 1418
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	2 cut(s)	99, 777
MlyI	GAGTC	3 cut(s)	542, 740, 1064
MmeI	TCCRAC	5 cut(s)	7, 576, 723, 1450, 1476
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1036
MroXI	GAANNNNTTC	2 cut(s)	119, 1165
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	264, 734, 795
MslI	CAYNNNNRTG	2 cut(s)	950, 1106
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	135
MspCI	CTTAAG	1 cut(s)	733
MspI	CCGG	7 cut(s)	66, 76, 96, 112, 200, 209, 1076
MspR9I	CCNGG	3 cut(s)	76, 986, 1077
Mva1269I	GAATGC	1 cut(s)	247
MvaI	CCWGG	1 cut(s)	986
MvnI	CGCG	6 cut(s)	165, 332, 362, 509, 575, 740
NarI	GGCGCC	2 cut(s)	99, 777
NciI	CCSGG	2 cut(s)	76, 1077
NlaIII	CATG	4 cut(s)	949, 1150, 1390, 1450
NlaIV	GGNNCC	6 cut(s)	31, 100, 204, 778, 1082, 1357
NmeAIII	GCCGAG	2 cut(s)	495, 708
NmuCI	GTSAC	1 cut(s)	11
NruI	TCGCGA	1 cut(s)	509
NsiI	ATGCAT	1 cut(s)	1036
NspV	TTCGAA	1 cut(s)	1532
PaeR7I	CTCGAG	1 cut(s)	1222
PciSI	GCTCTTC	1 cut(s)	1529
PcsI	WCGNNNNNNNCGW	8 cut(s)	33, 174, 543, 552, 612, 755, 878, 1517
PctI	GAATGC	1 cut(s)	247
PdmI	GAANNNNTTC	2 cut(s)	119, 1165
PfeI	GAWTC	5 cut(s)	356, 485, 674, 963, 1471
PflFI	GACNNNGTC	1 cut(s)	557
PkrI	GCNGC	8 cut(s)	137, 140, 184, 454, 628, 830, 1022, 1300
PleI	GAGTC	3 cut(s)	542, 740, 1064
PluTI	GGCGCC	2 cut(s)	102, 780
PpsI	GAGTC	3 cut(s)	542, 740, 1064
PpuMI	RGGWCCY	1 cut(s)	412
Psp124BI	GAGCTC	2 cut(s)	149, 396
Psp5II	RGGWCCY	1 cut(s)	412
Psp6I	CCWGG	1 cut(s)	984
PspGI	CCWGG	1 cut(s)	984
PspN4I	GGNNCC	6 cut(s)	31, 100, 204, 778, 1082, 1357
PspPI	GGNCC	2 cut(s)	84, 412
PspPPI	RGGWCCY	1 cut(s)	412
PspXI	VCTCGAGB	1 cut(s)	1222
PstI	CTGCAG	1 cut(s)	420
PstNI	CAGNNNCTG	1 cut(s)	647
PsuI	RGATCY	3 cut(s)	29, 316, 1227
PsyI	GACNNNGTC	1 cut(s)	557
PvuII	CAGCTG	1 cut(s)	135
RruI	TCGCGA	1 cut(s)	509
RsaI	GTAC	2 cut(s)	1100, 1201
RsaNI	GTAC	2 cut(s)	1099, 1200
RseI	CAYNNNNRTG	2 cut(s)	950, 1106
SacI	GAGCTC	2 cut(s)	149, 396
SapI	GCTCTTC	1 cut(s)	1529
SaqAI	TTAA	3 cut(s)	264, 734, 795
SatI	GCNGC	8 cut(s)	136, 139, 183, 453, 627, 829, 1021, 1299
Sau96I	GGNCC	2 cut(s)	84, 412
SbfI	CCTGCAGG	1 cut(s)	420
SchI	GAGTC	3 cut(s)	542, 740, 1064
ScrFI	CCNGG	3 cut(s)	76, 986, 1077
SdaI	CCTGCAGG	1 cut(s)	420
SduI	GDGCHC	3 cut(s)	149, 396, 654
SexAI	ACCWGGT	1 cut(s)	984
SfaNI	GCATC	4 cut(s)	501, 1021, 1042, 1103
SfcI	CTRYAG	1 cut(s)	416
SfoI	GGCGCC	2 cut(s)	100, 778
Sfr274I	CTCGAG	1 cut(s)	1222
SfuI	TTCGAA	1 cut(s)	1532
SinI	GGWCC	2 cut(s)	84, 412
SlaI	CTCGAG	1 cut(s)	1222
SmiMI	CAYNNNNRTG	2 cut(s)	950, 1106
SmlI	CTYRAG	4 cut(s)	395, 733, 803, 1222
SmoI	CTYRAG	4 cut(s)	395, 733, 803, 1222
Sse8387I	CCTGCAGG	1 cut(s)	420
Sse9I	AATT	8 cut(s)	669, 714, 721, 808, 1014, 1060, 1181, 1418
SspDI	GGCGCC	2 cut(s)	98, 776
SspI	AATATT	3 cut(s)	120, 889, 1044
SspMI	CTAG	1 cut(s)	41
SstI	GAGCTC	2 cut(s)	149, 396
StyD4I	CCNGG	3 cut(s)	74, 984, 1075
StyI	CCWWGG	2 cut(s)	477, 1359
TaiI	ACGT	2 cut(s)	561, 618
TaqI	TCGA	9 cut(s)	123, 546, 749, 872, 1152, 1179, 1223, 1520, 1532
TasI	AATT	8 cut(s)	669, 714, 721, 808, 1014, 1060, 1181, 1418
TatI	WGTACW	1 cut(s)	1199
TauI	GCSGC	3 cut(s)	141, 455, 1301
TfiI	GAWTC	5 cut(s)	356, 485, 674, 963, 1471
Tru1I	TTAA	3 cut(s)	264, 734, 795
Tru9I	TTAA	3 cut(s)	264, 734, 795
TscAI	CASTG	1 cut(s)	1179
TseFI	GTSAC	1 cut(s)	11
TseI	GCWGC	5 cut(s)	135, 182, 626, 828, 1020
Tsp45I	GTSAC	1 cut(s)	11
TspDTI	ATGAA	1 cut(s)	886
TspGWI	ACGGA	2 cut(s)	22, 923
TspRI	CASTG	1 cut(s)	1179
Tth111I	GACNNNGTC	1 cut(s)	557
Vha464I	CTTAAG	1 cut(s)	733
VneI	GTGCAC	1 cut(s)	650
VpaK11BI	GGWCC	2 cut(s)	84, 412
XapI	RAATTY	2 cut(s)	721, 808
XcmI	CCANNNNNNNNNTGG	1 cut(s)	787
XhoI	CTCGAG	1 cut(s)	1222
XmnI	GAANNNNTTC	2 cut(s)	119, 1165
XspI	CTAG	1 cut(s)	41
ZraI	GACGTC	1 cut(s)	559
Zsp2I	ATGCAT	1 cut(s)	1036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.