Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0008732

Physical Location & Seq

Genomic Coordinates Reverse (-)

29110784 .. 29116453

Gene Structure 5670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g41020.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGAGGAGGAGAAGATTCAGAAATTCATTCAGGACTATTTCAAGAATAGAGGGCTCAAGTTGCCAGAAGAACTTCAGCAATCATCCACCAACACTGTTTCCTCCCCCGTCTCTCAATTCGACCCCGACGTCGTCAGATTTCAGGATGGTCCTGCTCGTTACCAAGATGAATATGCCAGGTTGAGGTCATGGACTTATACTTCTCTAGATTTGTACAGGCATGAGTTGCTCCGTGTTCTTTACCCAGTATTTATTCATTGTTTCATGGACCTTGTTGCTAAGGGTCATATTCAAGAAGCTCGGACATTTTTCAATAGCTTCCGCGAAGACCATGAAATGATGCACCTACGAGATCTACAGAAGTTGGAAGGAGTTCTTTCTCCCTCTCATTTGGAGGAGATGGAATTTGCTCATTCTCTTAGGCAGAGCAAAGTGAACATCAAGATATGTCAGTACTCCTATGAGCTTCTGCTGCAGTTCTTGCACAAGTCACAGTCCACCACAATGCTTGGGATTATCAATGAGCATATTAATTTCCAAGTTTCTCCTGGACAACCCAGCTCAATTACTGATGATGCGGAGGCTGTAACACTTATGGGAGGCAGCCAGGAGTCGGCTAATCAAATAAACCAGAAGGAAATTCATTGGGGGTTGCTTGAAGATTCCTTGGAAGAACGCTTGGAAAAGGTTGGCGGAATGGCTTTAGATTCTGAAAGAGCAGAAGGGGAAACCAAAGAAGGGGAGGGTGATGAAAATAAGAAAAAATCAATTGAAGGTGGTAAACAGGGTGCTTCTATCAAAAAGCAAAAAAAGGACAAGGCTGTTAGTGCAACAATGAAAAGTGCACGCCCTGAGGCAACCCCTGTACCTACTGCACCACGAGTCAAACCAGAACTTACTTTGCCAGTAATTCCAACAGAAGTTGAACAGTCTATTCTTGAGGACTTGAGAAACCGTGTACAGTTGAGTAGTGCTGCGCTGCCATCTGTCAGCTTTTATACATTTATCAACACACACAATGGTTTGAACTGTTCATCTATTTCCCATGATGGATCCCTGGTTGCTGGTGGATTTTCTGACTCGTCGCTGAAGGTCTGGGATATGGCAAAGATTGGGCAACAGTCTGTTGGTTATCTGCAGGGTGAAAATGGCACGGCTTCAAGTGAACAAGTTGCTGGCTCAAATGGCGGGAAAAGACCATACACATTGTTTCAGGGTCATTCAGGGCCAGTTTATTCTGCCACTTTCAATCCTCTTGGTGATTTTATACTTTCCTCTTCAGCAGACTCAACTATTCGGTTGTGGAGCACAAACCTTAATGCTAATCTTGTTTGCTACAAGGGTCATAATTACCCTGTATGGGATGTTCAGTTTAGCCCTGTAGGTCATTATTTTGCCAGTGCTTCACATGATAGAACAGCAAGAATTTGGTCTATGGATAGAATACAGCCTTTGAGAATAATGGCGGGGCACTTATCTGATGTTGATTGTGTACAATGGCATTCCAACTGCAACTACATTGCAACTGGTTCTAGTGACAAAACAGTTAGATTATGGGATGTACAGAGTGGAGAGTGTGTCCGAATATTCATTGGCCACAGGAGTATGATTTTATCTCTCGCAATGTCACCTGATGGTCGGTATATGGCTTCGGGTGATGAAGACGGCTCAATCATGATGTGGGATCTTTCAACTGGCCGCTGCGTTACACCTTTGATGGGTCATACATCATGCGTATGGACACTGGCTTTCAGTGGTGAAGGTTCACTCCTTGCTTCTGGCTCTGCTGATTGCACGGTAAAATTATGGGACATAACTGCAAGTACAAAGTTGCCAAAAGCTGAAGAAAAAAGTGGAAGTGCTAGCAGACTGAGGTCATTGAAGACTTTACCAACCAAGAGTACGCCTGTCTACTCCTTACGGTTTTCTCGAAGGAATCTTCTGTTTGCAGCCGGGGTCCTTTCAAAAAGTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000228 GO:0000428 GO:0000785 GO:0000790 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005694 GO:0005856 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0015629 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030880 GO:0031248 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0033276 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044798 GO:0046483 GO:0046983 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902493 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05168 map03022 map05168

Pfam Domains

Protein Families

TFIID_NTD2 WD40

Protein Analysis

659

Amino Acids

73.08

Weight (kDa)

6.23

Isoelectric Point (pI)

50.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIID_NTD2	PF04494	49 - 177	3.2e-45	WD40 associated region in TFIID subunit, NTD2 domain
Beta-prop_WDR5	PF25175	335 - 453	4.6e-10	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	335 - 521	2.1e-25	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	340 - 480	7.1e-10	CAF1B/HIR1 beta-propeller domain
WD40	PF00400	401 - 436	9.3e-09	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	402 - 520	4.3e-18	WDR3 second beta-propeller domain
WD40_Gbeta	PF25391	402 - 480	2.1e-06	G protein beta WD-40 repeat protein
WD40_Prp19	PF24814	402 - 563	2.8e-34	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	402 - 482	2.6e-15	THOC3 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	402 - 563	1.5e-15	TEP-1 second beta-propeller
EIF3I	PF24805	403 - 480	1.7e-10	EIF3I
Beta-prop_WDR36-Utp21_2nd	PF25168	403 - 472	3.1e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_IFT122_1st	PF23381	404 - 548	1.1e-06	IFT122 first beta-propeller
Beta-prop_EML_2	PF23414	410 - 507	7.9e-07	Echinoderm microtubule-associated protein second beta-propeller
WDR55	PF24796	411 - 566	2.4e-14	WDR55
WD40_CDC20-Fz	PF24807	445 - 528	1.2e-12	CDC20/Fizzy WD40 domain
WD40	PF00400	445 - 478	1e-08	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	447 - 610	2.6e-47	WDR5 beta-propeller domain
WDR90_beta-prop_4th	PF23342	453 - 575	2.6e-08	WDR90, 4th beta-propeller
WD40_MABP1-WDR62_2nd	PF24782	453 - 563	1.2e-14	MABP1/WDR62 second WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	457 - 608	5.9e-12	WDR36/Utp21 first beta-propeller
Beta-prop_WDR19_1st	PF23389	461 - 647	9.4e-10	WDR19 first beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	465 - 568	4.6e-13	WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	468 - 552	3.2e-10	WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3	PF25174	470 - 575	3.8e-24	THOC3 beta-propeller domain
WD40	PF00400	483 - 520	3.7e-10	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	485 - 570	2.4e-10	CAF1B/HIR1 beta-propeller domain
WD40_Gbeta	PF25391	486 - 611	1.6e-21	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	493 - 570	8.3e-15	WDHD1 first WD40 domain
Beta-prop_IFT140_1st	PF23383	493 - 564	1.3e-07	IFT140 first beta-propeller
Beta-prop_WDR3_2nd	PF25172	497 - 606	5.4e-20	WDR3 second beta-propeller domain
Beta-prop_EML_2	PF23414	503 - 623	1.4e-15	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_SCAP	PF24017	507 - 614	1.1e-09	SCAP Beta-propeller
Beta-prop_WDR3_1st	PF25173	515 - 620	2.2e-26	WDR3 first beta-propeller domain
WD40	PF00400	524 - 562	3.3e-10	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	526 - 617	2.5e-19	THOC3 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	528 - 613	6.1e-10	TEP-1 second beta-propeller
WD40_MABP1-WDR62_1st	PF24780	529 - 607	8e-06	MABP1/WDR62 first WD40 domain
Beta-prop_EML	PF23409	535 - 608	2.5e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_MABP1-WDR62_2nd	PF24782	537 - 604	2.1e-07	MABP1/WDR62 second WD40 domain
WD40_Prp19	PF24814	540 - 611	3.4e-15	Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	554 - 609	4.9e-07	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	566 - 604	5.4e-11	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25150 AT5G25150
fragaria_vesca	FvH4_2g41020 FvH4_2g41020 FvH4_2g41020 FvH4_2g41020 FvH4_2g41020
malus_domestica	MD00G1143300.v1.1 MD15G1039100.v1.1
prunus_persica	Prupe.1G392800_v2.0.a1 Prupe.1G392800_v2.0.a1
pyrus_communis	pycom08g04780
rosa_chinensis	RchiOBHm_Chr6g0299541
rosa_laevigata	RLG00000011417
rosa_multiflora	Rmu_sc0004064.1_g000008
rosa_roxburghii	Rroxscaffold_7G00168570
rosa_rugosa	Rorug06G0289700 Rorug06G0289800 Rorug06G0289900 Rorug06G0289900
rosa_samantha	Rh6AG401100 Rh6DG402200
rosa_wichuraiana	Rw6G035100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	1 cut(s)	132
AccI	GTMKAC	1 cut(s)	1911
AccII	CGCG	1 cut(s)	324
AciI	CCGC	6 cut(s)	322, 578, 693, 1188, 1466, 1699
AclWI	GGATC	3 cut(s)	1047, 1060, 1692
AcoI	YGGCCR	2 cut(s)	1594, 1696
AcsI	RAATTY	4 cut(s)	23, 404, 639, 1425
AcuI	CTGAAG	4 cut(s)	59, 1109, 1263, 1863
AcyI	GRCGYC	1 cut(s)	129
AfaI	GTAC	8 cut(s)	215, 455, 867, 960, 1494, 1563, 1825, 1903
AfiI	CCNNNNNNNGG	5 cut(s)	183, 613, 738, 1360, 1718
AjnI	CCWGG	4 cut(s)	176, 547, 606, 1056
AluBI	AGCT	6 cut(s)	299, 318, 466, 561, 993, 1841
AluI	AGCT	6 cut(s)	299, 318, 466, 561, 993, 1841
Alw21I	GWGCWC	2 cut(s)	847, 1310
Alw26I	GTCTC	1 cut(s)	115
Alw44I	GTGCAC	1 cut(s)	843
AlwI	GGATC	3 cut(s)	1047, 1060, 1692
AoxI	GGCC	3 cut(s)	1226, 1594, 1696
ApaLI	GTGCAC	1 cut(s)	843
ApeKI	GCWGC	6 cut(s)	472, 603, 974, 979, 1701, 1949
ApoI	RAATTY	4 cut(s)	23, 404, 639, 1425
AseI	ATTAAT	1 cut(s)	531
Asp700I	GAANNNNTTC	2 cut(s)	72, 372
AspLEI	GCGC	1 cut(s)	979
AspS9I	GGNCC	4 cut(s)	149, 268, 1226, 1957
AsuC2I	CCSGG	1 cut(s)	1954
AsuHPI	GGTGA	6 cut(s)	758, 1154, 1271, 1620, 1667, 1769
AsuNHI	GCTAGC	1 cut(s)	1862
AvaII	GGWCC	3 cut(s)	149, 268, 1957
AxyI	CCTNAGG	1 cut(s)	852
BaeGI	GKGCMC	2 cut(s)	847, 1473
BaeI	ACNNNNGTAYC	2 cut(s)	849, 882
BalI	TGGCCA	1 cut(s)	1596
BamHI	GGATCC	1 cut(s)	1052
BanII	GRGCYC	1 cut(s)	57
BauI	CACGAG	1 cut(s)	879
BbsI	GAAGAC	3 cut(s)	333, 1668, 1889
Bbv12I	GWGCWC	2 cut(s)	847, 1310
BbvI	GCAGC	6 cut(s)	459, 615, 961, 966, 1688, 1961
BccI	CCATC	6 cut(s)	140, 394, 991, 1043, 1628, 1711
BceAI	ACGGC	2 cut(s)	1170, 1681
BciT130I	CCWGG	4 cut(s)	178, 549, 608, 1058
BcnI	CCSGG	1 cut(s)	1954
BcoDI	GTCTC	1 cut(s)	115
BfaI	CTAG	3 cut(s)	206, 1533, 1863
BfmI	CTRYAG	4 cut(s)	356, 473, 1136, 1380
BglII	AGATCT	1 cut(s)	352
BisI	GCNGC	7 cut(s)	473, 604, 975, 980, 1699, 1702, 1950
BlsI	GCNGC	7 cut(s)	474, 605, 976, 981, 1700, 1703, 1951
BmcAI	AGTACT	1 cut(s)	455
Bme1390I	CCNGG	5 cut(s)	178, 549, 608, 1058, 1954
Bme18I	GGWCC	3 cut(s)	149, 268, 1957
BmgT120I	GGNCC	4 cut(s)	149, 268, 1226, 1957
BmiI	GGNNCC	2 cut(s)	1054, 1958
BmrFI	CCNGG	5 cut(s)	178, 549, 608, 1058, 1954
BmrI	ACTGGG	1 cut(s)	239
BmsI	GCATC	2 cut(s)	330, 565
BmtI	GCTAGC	1 cut(s)	1866
BmuI	ACTGGG	1 cut(s)	239
BoxI	GACNNNNGTC	1 cut(s)	1873
BpiI	GAAGAC	3 cut(s)	333, 1668, 1889
Bpu10I	CCTNAGC	1 cut(s)	279
BpuEI	CTTGAG	3 cut(s)	41, 959, 967
BpuMI	CCSGG	1 cut(s)	1954
BsaHI	GRCGYC	1 cut(s)	129
BsaJI	CCNNGG	3 cut(s)	666, 1056, 1953
BsaXI	ACNNNNNCTCC	2 cut(s)	1563, 1593
Bsc4I	CCNNNNNNNGG	5 cut(s)	183, 613, 738, 1360, 1718
Bse1I	ACTGG	7 cut(s)	245, 905, 1229, 1398, 1531, 1699, 1749
Bse21I	CCTNAGG	1 cut(s)	852
Bse3DI	GCAATG	2 cut(s)	1518, 1629
BseBI	CCWGG	4 cut(s)	178, 549, 608, 1058
BseDI	CCNNGG	3 cut(s)	666, 1056, 1953
BseGI	GGATG	4 cut(s)	83, 151, 1369, 1564
BseLI	CCNNNNNNNGG	5 cut(s)	183, 613, 738, 1360, 1718
BseMI	GCAATG	2 cut(s)	1518, 1629
BseMII	CTCAG	2 cut(s)	843, 1862
BseNI	ACTGG	7 cut(s)	245, 905, 1229, 1398, 1531, 1699, 1749
BseRI	GAGGAG	3 cut(s)	20, 23, 410
BseSI	GKGCMC	2 cut(s)	847, 1473
BseXI	GCAGC	6 cut(s)	459, 615, 961, 966, 1688, 1961
BseYI	CCCAGC	1 cut(s)	557
BsgI	GTGCAG	1 cut(s)	858
Bsh1236I	CGCG	1 cut(s)	324
BshFI	GGCC	3 cut(s)	1228, 1596, 1698
BsiHKAI	GWGCWC	2 cut(s)	847, 1310
BsiSI	CCGG	1 cut(s)	1953
BslFI	GGGAC	1 cut(s)	1823
BslI	CCNNNNNNNGG	5 cut(s)	183, 613, 738, 1360, 1718
BsmAI	GTCTC	1 cut(s)	115
BsmBI	CGTCTC	1 cut(s)	115
BsmFI	GGGAC	1 cut(s)	1823
BsmI	GAATGC	1 cut(s)	1501
BsnI	GGCC	3 cut(s)	1228, 1596, 1698
Bsp1286I	GDGCHC	4 cut(s)	57, 847, 1310, 1473
Bsp1407I	TGTACA	4 cut(s)	213, 958, 1492, 1561
Bsp143I	GATC	3 cut(s)	352, 1052, 1684
BspACI	CCGC	6 cut(s)	322, 578, 693, 1188, 1466, 1699
BspANI	GGCC	3 cut(s)	1228, 1596, 1698
BspCNI	CTCAG	2 cut(s)	844, 1863
BspFNI	CGCG	1 cut(s)	324
BspHI	TCATGA	1 cut(s)	1674
BspLI	GGNNCC	2 cut(s)	1054, 1958
BspMAI	CTGCAG	2 cut(s)	477, 1140
BspOI	GCTAGC	1 cut(s)	1866
BspPI	GGATC	3 cut(s)	1047, 1060, 1692
BsrDI	GCAATG	2 cut(s)	1518, 1629
BsrGI	TGTACA	4 cut(s)	213, 958, 1492, 1561
BsrI	ACTGG	7 cut(s)	245, 905, 1229, 1398, 1531, 1699, 1749
BssECI	CCNNGG	3 cut(s)	666, 1056, 1953
BssMI	GATC	3 cut(s)	352, 1052, 1684
BssNI	GRCGYC	1 cut(s)	129
BssSI	CACGAG	1 cut(s)	879
BssT1I	CCWWGG	1 cut(s)	666
Bst2BI	CACGAG	1 cut(s)	879
Bst2UI	CCWGG	4 cut(s)	178, 549, 608, 1058
Bst6I	CTCTTC	1 cut(s)	1282
BstACI	GRCGYC	1 cut(s)	129
BstAPI	GCANNNNNTGC	2 cut(s)	226, 481
BstAUI	TGTACA	4 cut(s)	213, 958, 1492, 1561
BstC8I	GCNNGC	3 cut(s)	847, 1177, 1864
BstDEI	CTNAG	4 cut(s)	279, 419, 852, 1871
BstF5I	GGATG	4 cut(s)	83, 151, 1369, 1564
BstFNI	CGCG	1 cut(s)	324
BstHHI	GCGC	1 cut(s)	979
BstKTI	GATC	3 cut(s)	355, 1055, 1687
BstMAI	GTCTC	1 cut(s)	115
BstMBI	GATC	3 cut(s)	352, 1052, 1684
BstMWI	GCNNNNNNNGC	6 cut(s)	61, 226, 472, 481, 827, 1185
BstNI	CCWGG	4 cut(s)	178, 549, 608, 1058
BstPAI	GACNNNNGTC	1 cut(s)	1873
BstSCI	CCNGG	5 cut(s)	176, 547, 606, 1056, 1952
BstSFI	CTRYAG	4 cut(s)	356, 473, 1136, 1380
BstSLI	GKGCMC	2 cut(s)	847, 1473
BstUI	CGCG	1 cut(s)	324
BstV1I	GCAGC	6 cut(s)	459, 615, 961, 966, 1688, 1961
BstV2I	GAAGAC	3 cut(s)	333, 1668, 1889
BstX2I	RGATCY	3 cut(s)	352, 1052, 1684
BstYI	RGATCY	3 cut(s)	352, 1052, 1684
Bsu36I	CCTNAGG	1 cut(s)	852
BsuRI	GGCC	3 cut(s)	1228, 1596, 1698
BtsCI	GGATG	4 cut(s)	83, 151, 1369, 1564
BtsIMutI	CAGTG	4 cut(s)	93, 1405, 1742, 1759
Cac8I	GCNNGC	3 cut(s)	847, 1177, 1864
CciI	TCATGA	1 cut(s)	1674
CfoI	GCGC	1 cut(s)	979
Cfr13I	GGNCC	4 cut(s)	149, 268, 1226, 1957
Csp6I	GTAC	8 cut(s)	214, 454, 866, 959, 1493, 1562, 1824, 1902
CspCI	CAANNNNNGTGG	2 cut(s)	490, 525
CviAII	CATG	8 cut(s)	189, 221, 265, 332, 1046, 1409, 1675, 1731
CviQI	GTAC	8 cut(s)	214, 454, 866, 959, 1493, 1562, 1824, 1902
DdeI	CTNAG	4 cut(s)	279, 419, 852, 1871
DpnI	GATC	3 cut(s)	354, 1054, 1686
DpnII	GATC	3 cut(s)	352, 1052, 1684
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	2 cut(s)	1594, 1696
Eam1104I	CTCTTC	1 cut(s)	1282
EarI	CTCTTC	1 cut(s)	1282
EciI	GGCGGA	1 cut(s)	708
Eco130I	CCWWGG	1 cut(s)	666
Eco24I	GRGCYC	1 cut(s)	57
Eco47I	GGWCC	3 cut(s)	149, 268, 1957
Eco57I	CTGAAG	4 cut(s)	59, 1109, 1263, 1863
Eco81I	CCTNAGG	1 cut(s)	852
EcoO109I	RGGNCCY	1 cut(s)	1957
EcoRII	CCWGG	4 cut(s)	176, 547, 606, 1056
EcoT14I	CCWWGG	1 cut(s)	666
EcoT38I	GRGCYC	1 cut(s)	57
ErhI	CCWWGG	1 cut(s)	666
Esp3I	CGTCTC	1 cut(s)	115
FaeI	CATG	8 cut(s)	192, 224, 268, 335, 1049, 1412, 1678, 1734
FalI	AAGNNNNNCTT	2 cut(s)	360, 392
FaqI	GGGAC	1 cut(s)	1823
FatI	CATG	8 cut(s)	188, 220, 264, 331, 1045, 1408, 1674, 1730
FauI	CCCGC	2 cut(s)	1181, 1459
FblI	GTMKAC	1 cut(s)	1911
Fnu4HI	GCNGC	7 cut(s)	473, 604, 975, 980, 1699, 1702, 1950
FokI	GGATG	4 cut(s)	70, 158, 1376, 1571
FriOI	GRGCYC	1 cut(s)	57
Fsp4HI	GCNGC	7 cut(s)	473, 604, 975, 980, 1699, 1702, 1950
FspBI	CTAG	3 cut(s)	206, 1533, 1863
GlaI	GCGC	1 cut(s)	978
GluI	GCNGC	7 cut(s)	473, 604, 975, 980, 1699, 1702, 1950
GsaI	CCCAGC	1 cut(s)	561
HaeIII	GGCC	3 cut(s)	1228, 1596, 1698
HapII	CCGG	1 cut(s)	1953
HhaI	GCGC	1 cut(s)	979
Hin1I	GRCGYC	1 cut(s)	129
Hin1II	CATG	8 cut(s)	192, 224, 268, 335, 1049, 1412, 1678, 1734
Hin6I	GCGC	1 cut(s)	977
HinP1I	GCGC	1 cut(s)	977
HinfI	GANTC	8 cut(s)	16, 611, 662, 707, 882, 1079, 1286, 1936
HpaII	CCGG	1 cut(s)	1953
HphI	GGTGA	6 cut(s)	758, 1154, 1271, 1620, 1667, 1769
Hpy166II	GTNNAC	9 cut(s)	436, 498, 782, 845, 959, 1166, 1493, 1766, 1912
Hpy188I	TCNGA	7 cut(s)	21, 137, 303, 712, 1078, 1480, 1583
Hpy188III	TCNNGA	9 cut(s)	32, 43, 143, 206, 293, 442, 938, 1675, 1929
Hpy8I	GTNNAC	9 cut(s)	436, 498, 782, 845, 959, 1166, 1493, 1766, 1912
Hpy99I	CGWCG	3 cut(s)	131, 134, 1087
HpyAV	CCTTC	8 cut(s)	362, 628, 716, 731, 767, 1084, 1754, 1926
HpyCH4IV	ACGT	1 cut(s)	129
HpyF10VI	GCNNNNNNNGC	6 cut(s)	61, 226, 472, 481, 827, 1185
HpyF3I	CTNAG	4 cut(s)	279, 419, 852, 1871
HpySE526I	ACGT	1 cut(s)	129
Hsp92I	GRCGYC	1 cut(s)	129
Hsp92II	CATG	8 cut(s)	192, 224, 268, 335, 1049, 1412, 1678, 1734
HspAI	GCGC	1 cut(s)	977
Kzo9I	GATC	3 cut(s)	352, 1052, 1684
LmnI	GCTCC	2 cut(s)	234, 1305
Lsp1109I	GCAGC	6 cut(s)	459, 615, 961, 966, 1688, 1961
LweI	GCATC	2 cut(s)	330, 565
MaeI	CTAG	3 cut(s)	206, 1533, 1863
MaeII	ACGT	1 cut(s)	129
MaeIII	GTNAC	6 cut(s)	158, 489, 586, 1535, 1626, 1705
MalI	GATC	3 cut(s)	354, 1054, 1686
MboI	GATC	3 cut(s)	352, 1052, 1684
MfeI	CAATTG	1 cut(s)	768
MflI	RGATCY	3 cut(s)	352, 1052, 1684
MhlI	GDGCHC	4 cut(s)	57, 847, 1310, 1473
MlsI	TGGCCA	1 cut(s)	1596
MluNI	TGGCCA	1 cut(s)	1596
MlyI	GAGTC	4 cut(s)	620, 891, 1073, 1280
MmeI	TCCRAC	3 cut(s)	345, 938, 1530
Mox20I	TGGCCA	1 cut(s)	1596
MroXI	GAANNNNTTC	2 cut(s)	72, 372
MscI	TGGCCA	1 cut(s)	1596
MseI	TTAA	2 cut(s)	531, 1317
MslI	CAYNNNNRTG	2 cut(s)	503, 1735
Msp20I	TGGCCA	1 cut(s)	1596
MspA1I	CMGCKG	1 cut(s)	1701
MspI	CCGG	1 cut(s)	1953
MspR9I	CCNGG	5 cut(s)	178, 549, 608, 1058, 1954
MunI	CAATTG	1 cut(s)	768
Mva1269I	GAATGC	1 cut(s)	1501
MvaI	CCWGG	4 cut(s)	178, 549, 608, 1058
MvnI	CGCG	1 cut(s)	324
MwoI	GCNNNNNNNGC	6 cut(s)	61, 226, 472, 481, 827, 1185
NciI	CCSGG	1 cut(s)	1954
NdeII	GATC	3 cut(s)	352, 1052, 1684
NheI	GCTAGC	1 cut(s)	1862
NlaIII	CATG	8 cut(s)	192, 224, 268, 335, 1049, 1412, 1678, 1734
NlaIV	GGNNCC	2 cut(s)	1054, 1958
NmuCI	GTSAC	3 cut(s)	489, 1535, 1626
PagI	TCATGA	1 cut(s)	1674
PcsI	WCGNNNNNNNCGW	2 cut(s)	126, 1927
PctI	GAATGC	1 cut(s)	1501
PdmI	GAANNNNTTC	2 cut(s)	72, 372
PfeI	GAWTC	4 cut(s)	16, 662, 707, 1936
PflFI	GACNNNGTC	1 cut(s)	131
PfoI	TCCNGGA	1 cut(s)	547
PkrI	GCNGC	7 cut(s)	474, 605, 976, 981, 1700, 1703, 1951
PleI	GAGTC	4 cut(s)	619, 890, 1073, 1280
PpsI	GAGTC	4 cut(s)	619, 890, 1073, 1280
PpuMI	RGGWCCY	1 cut(s)	1957
PshAI	GACNNNNGTC	1 cut(s)	1873
PshBI	ATTAAT	1 cut(s)	531
Psp5II	RGGWCCY	1 cut(s)	1957
Psp6I	CCWGG	4 cut(s)	176, 547, 606, 1056
PspFI	CCCAGC	1 cut(s)	557
PspGI	CCWGG	4 cut(s)	176, 547, 606, 1056
PspN4I	GGNNCC	2 cut(s)	1054, 1958
PspPI	GGNCC	4 cut(s)	149, 268, 1226, 1957
PspPPI	RGGWCCY	1 cut(s)	1957
PsrI	GAACNNNNNNTAC	2 cut(s)	1350, 1382
PstI	CTGCAG	2 cut(s)	477, 1140
PsuI	RGATCY	3 cut(s)	352, 1052, 1684
PsyI	GACNNNGTC	1 cut(s)	131
RsaI	GTAC	8 cut(s)	215, 455, 867, 960, 1494, 1563, 1825, 1903
RsaNI	GTAC	8 cut(s)	214, 454, 866, 959, 1493, 1562, 1824, 1902
RseI	CAYNNNNRTG	2 cut(s)	503, 1735
SaqAI	TTAA	2 cut(s)	531, 1317
SatI	GCNGC	7 cut(s)	473, 604, 975, 980, 1699, 1702, 1950
Sau3AI	GATC	3 cut(s)	352, 1052, 1684
Sau96I	GGNCC	4 cut(s)	149, 268, 1226, 1957
ScaI	AGTACT	1 cut(s)	455
SchI	GAGTC	4 cut(s)	620, 891, 1073, 1280
ScrFI	CCNGG	5 cut(s)	178, 549, 608, 1058, 1954
SduI	GDGCHC	4 cut(s)	57, 847, 1310, 1473
SfaNI	GCATC	2 cut(s)	330, 565
SfcI	CTRYAG	4 cut(s)	356, 473, 1136, 1380
SinI	GGWCC	3 cut(s)	149, 268, 1957
SmiMI	CAYNNNNRTG	2 cut(s)	503, 1735
SmlI	CTYRAG	3 cut(s)	56, 938, 946
SmoI	CTYRAG	3 cut(s)	56, 938, 946
SsiI	CCGC	6 cut(s)	322, 578, 693, 1188, 1466, 1699
SspI	AATATT	1 cut(s)	1587
SspMI	CTAG	3 cut(s)	206, 1533, 1863
StyD4I	CCNGG	5 cut(s)	176, 547, 606, 1056, 1952
StyI	CCWWGG	1 cut(s)	666
TaiI	ACGT	1 cut(s)	132
TaqI	TCGA	2 cut(s)	120, 1930
TatI	WGTACW	6 cut(s)	213, 453, 958, 1492, 1561, 1823
TauI	GCSGC	1 cut(s)	1701
TfiI	GAWTC	4 cut(s)	16, 662, 707, 1936
Tru1I	TTAA	2 cut(s)	531, 1317
Tru9I	TTAA	2 cut(s)	531, 1317
TscAI	CASTG	4 cut(s)	100, 1405, 1749, 1759
TseFI	GTSAC	3 cut(s)	489, 1535, 1626
TseI	GCWGC	6 cut(s)	472, 603, 974, 979, 1701, 1949
Tsp45I	GTSAC	3 cut(s)	489, 1535, 1626
TspGWI	ACGGA	1 cut(s)	221
TspRI	CASTG	4 cut(s)	100, 1405, 1749, 1759
Tth111I	GACNNNGTC	1 cut(s)	131
VneI	GTGCAC	1 cut(s)	843
VpaK11BI	GGWCC	3 cut(s)	149, 268, 1957
VspI	ATTAAT	1 cut(s)	531
XapI	RAATTY	4 cut(s)	23, 404, 639, 1425
XbaI	TCTAGA	1 cut(s)	205
XcmI	CCANNNNNNNNNTGG	1 cut(s)	545
XmiI	GTMKAC	1 cut(s)	1911
XmnI	GAANNNNTTC	2 cut(s)	72, 372
XspI	CTAG	3 cut(s)	206, 1533, 1863
ZraI	GACGTC	1 cut(s)	130
ZrmI	AGTACT	1 cut(s)	455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.