Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0008732

Physical Location & Seq

Genomic Coordinates Reverse (-)

31190958 .. 31195399

Gene Structure 4442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1143300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGTCTGAAGCGGTGGACGACGAGAGCGTGCGGAAGTTCGTGGCGGCTTACTTGAAGAAGAAAGGCTTCAAGCAGGCGGAGAACGCTTTTCAAGAAGAACTAAACAAGAATACCAACAGCTCTTCGTCCCCGATCTCTTTCAATTCCCAATTGGACCCCGACGTCGCCAAGCACATCCTCTCCTTCTCCCAATACGAGGAAGGTCCAGCACAGTATCAAGATGGATATGCCAAGTTGAGATCATGGACTTACAGTTCACTAGATTTGTACAGGCATGAGTTGCTTCGTGTTCTCTATCCTGTATTTATTCATTGTTTCATGGATCTGGTTGCTAAAGGTCATATACAAGAAGCTCGGACATTTTTCAATAGCTTCCGTGAAGACCATGAAATGATGCACCTACGAGATCTACAGAAGTTGGAAGGCGTTCTTTCTCCCTCTCATTTGGAGGAGATGGAATTTGCTCATTCTCTTAGGCAGAGCAAAGTCAACATAAAGATATGCCAGTACTCGTATGAGCTTCTGCTGCAGTTTCTACACAAGTCACAATCCACCACAGTGCTTGGGATTATCAATGAGCATATTAACTTCCAAGTTTCTCCTGGACAACCCAGCTCAATTTCCGAAGATGCTGAGGCTGTAACACTTACCGGAAGTAGCCTGGATTCAGCTAATCAGATAAACCAAAAGGAAATACACTGGGGGTTGCTCGAAGATTCCTTTGAAGAACGCTTGGAAAAGGCTGGGGCCTTAGACTCTGAAAAAGCAGAAGGAGAAAGCAAAGAAGGGGATGGGGATGAGAATAAGAAAAAATCAAGTGAAGGAGCTAAACAGGGGGCTTCAAACAAAAAGTTGAAAAAGGACAAGGCTTCTGGTGCAACGGCGAAAACTGCACGCCCTGAGGCAACCCCTGTAACTGCAGTACCAAGAGTCAAACCAGAGCTTACTCTGCCAGTAATGTATCCCACAGAGGTTGAACAGTCAATCTTTGAAGACTTGAGAAACCGTGTGCAATTGAGTAGTGCTGCACTGCCATCTGTCAGCTTTTATACATTCATCAACACACACAATGGTTTAAACTGTTCGTCTATATCCCATGATGGATCCATGGTTGCTGGTGGATTTTCAGACTCGTCGCTGAAGGTATGGGATATGGCAAAGATTGGGCAACAAGGCCTTGATTCAGCGTTGCAGGGTGAGAATGGTACCACCACTTCAAGTGAACAAGTTTTGTCAAATGGTGGAAAAAAACCATATACCTTGTTTCAGGGTCATTCAGGGCCAGTTTATTCAGCTACATTCAATCCCCTTGGGGATTTTATACTCTCCTCTTCAGCAGACTCAACTGTTCGGTTGTGGAGCACAAAATTAAATGCAAATCTTGTTTGCTACAAGGGTCATAATTACCCAGTATGGGATGTTCAGTTTAGCCCTGTTGGTCATTATTTTGCCAGTGCTTCACACGATCGAACAGCAAGGATTTGGTCTATGGACAGAATACAGCCTTTGAGAATAATGGCTGGGCACTTATCTGATGTTGATGTCATTTTTTATAGAATTACTGCCTCTGTAATCCATGCAACCAAATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000228 GO:0000428 GO:0000785 GO:0000790 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005694 GO:0005856 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0015629 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030880 GO:0031248 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0033276 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044798 GO:0046483 GO:0046983 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902493 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05168 map03022 map05168

Pfam Domains

Protein Families

TFIID_NTD2 WD40

Protein Analysis

531

Amino Acids

58.96

Weight (kDa)

5.97

Isoelectric Point (pI)

49.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIID_NTD2	PF04494	67 - 195	7.3e-46	WD40 associated region in TFIID subunit, NTD2 domain
Beta-prop_WDR5	PF25175	352 - 508	1.5e-21	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	353 - 514	1.8e-17	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	357 - 499	2.6e-10	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	361 - 504	4.9e-17	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	402 - 514	2.6e-07	CDC20/Fizzy WD40 domain
WD40_Gbeta	PF25391	403 - 503	1.4e-07	G protein beta WD-40 repeat protein
WD40_Prp19	PF24814	415 - 507	2.2e-13	Prp19 WD40 domain
WD40	PF00400	417 - 454	5.6e-09	WD domain, G-beta repeat
WD40_WDHD1_1st	PF24817	417 - 456	3.3e-06	WDHD1 first WD40 domain
Beta-prop_WDR3_2nd	PF25172	418 - 516	7.3e-11	WDR3 second beta-propeller domain
EIF3I	PF24805	421 - 501	7.6e-11	EIF3I
Beta-prop_WDR36-Utp21_2nd	PF25168	421 - 490	2.2e-07	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	463 - 496	7.6e-09	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25150 AT5G25150
fragaria_vesca	FvH4_2g41020 FvH4_2g41020 FvH4_2g41020 FvH4_2g41020 FvH4_2g41020
malus_domestica	MD00G1143300.v1.1 MD15G1039100.v1.1
prunus_persica	Prupe.1G392800_v2.0.a1 Prupe.1G392800_v2.0.a1
pyrus_communis	pycom08g04780
rosa_chinensis	RchiOBHm_Chr6g0299541
rosa_laevigata	RLG00000011417
rosa_multiflora	Rmu_sc0004064.1_g000008
rosa_roxburghii	Rroxscaffold_7G00168570
rosa_rugosa	Rorug06G0289700 Rorug06G0289800 Rorug06G0289900 Rorug06G0289900
rosa_samantha	Rh6AG401100 Rh6DG402200
rosa_wichuraiana	Rw6G035100

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	161
AatII	GACGTC	1 cut(s)	165
Acc65I	GGTACC	1 cut(s)	1205
AccB1I	GGYRCC	1 cut(s)	1205
AciI	CCGC	4 cut(s)	11, 31, 44, 77
AclWI	GGATC	3 cut(s)	330, 1098, 1111
AcsI	RAATTY	2 cut(s)	458, 1586
AcuI	CTGAAG	3 cut(s)	27, 1160, 1317
AcyI	GRCGYC	1 cut(s)	162
AfaI	GTAC	4 cut(s)	269, 509, 924, 1207
AfiI	CCNNNNNNNGG	2 cut(s)	196, 1414
AjnI	CCWGG	2 cut(s)	601, 660
AleI	CACNNNNGTG	1 cut(s)	557
AloI	GAACNNNNNNTCC	2 cut(s)	238, 270
Alw21I	GWGCWC	1 cut(s)	1364
AlwI	GGATC	3 cut(s)	330, 1098, 1111
AoxI	GGCC	3 cut(s)	747, 1174, 1280
ApeKI	GCWGC	2 cut(s)	526, 1025
ApoI	RAATTY	2 cut(s)	458, 1586
Asp700I	GAANNNNTTC	2 cut(s)	65, 426
Asp718I	GGTACC	1 cut(s)	1205
AspS9I	GGNCC	4 cut(s)	154, 203, 747, 1280
AsuHPI	GGTGA	1 cut(s)	1208
AvaII	GGWCC	2 cut(s)	154, 203
AxyI	CCTNAGG	1 cut(s)	900
BaeGI	GKGCMC	1 cut(s)	1527
BaeI	ACNNNNGTAYC	2 cut(s)	906, 939
BamHI	GGATCC	1 cut(s)	1103
BanI	GGYRCC	1 cut(s)	1205
BarI	GAAGNNNNNNTAC	2 cut(s)	1198, 1230
BbsI	GAAGAC	2 cut(s)	387, 999
Bbv12I	GWGCWC	1 cut(s)	1364
BbvCI	CCTCAGC	1 cut(s)	633
BbvI	GCAGC	2 cut(s)	513, 1012
BccI	CCATC	5 cut(s)	215, 448, 785, 1042, 1094
BceAI	ACGGC	1 cut(s)	897
BciT130I	CCWGG	2 cut(s)	603, 662
BciVI	GTATCC	1 cut(s)	972
BfaI	CTAG	1 cut(s)	260
BfmI	CTRYAG	3 cut(s)	410, 527, 918
BfuI	GTATCC	1 cut(s)	972
BglII	AGATCT	1 cut(s)	406
BisI	GCNGC	3 cut(s)	45, 527, 1026
BlsI	GCNGC	3 cut(s)	46, 528, 1027
BmcAI	AGTACT	1 cut(s)	509
Bme1390I	CCNGG	2 cut(s)	603, 662
Bme18I	GGWCC	2 cut(s)	154, 203
BmgT120I	GGNCC	4 cut(s)	154, 203, 747, 1280
BmiI	GGNNCC	4 cut(s)	156, 748, 1105, 1207
BmrFI	CCNGG	2 cut(s)	603, 662
BmrI	ACTGGG	2 cut(s)	709, 1403
BmsI	GCATC	2 cut(s)	384, 619
BmuI	ACTGGG	2 cut(s)	709, 1403
BpiI	GAAGAC	2 cut(s)	387, 999
Bpu10I	CCTNAGC	1 cut(s)	633
BpuEI	CTTGAG	1 cut(s)	1018
BsaHI	GRCGYC	1 cut(s)	162
BsaJI	CCNNGG	2 cut(s)	1107, 1309
BsaWI	WCCGGW	1 cut(s)	650
BsaXI	ACNNNNNCTCC	2 cut(s)	164, 194
Bsc4I	CCNNNNNNNGG	2 cut(s)	196, 1414
Bse1I	ACTGG	6 cut(s)	505, 704, 953, 1283, 1409, 1452
Bse21I	CCTNAGG	1 cut(s)	900
BseBI	CCWGG	2 cut(s)	603, 662
BseDI	CCNNGG	2 cut(s)	1107, 1309
BseGI	GGATG	4 cut(s)	174, 796, 802, 1423
BseLI	CCNNNNNNNGG	2 cut(s)	196, 1414
BseMII	CTCAG	2 cut(s)	624, 891
BseNI	ACTGG	6 cut(s)	505, 704, 953, 1283, 1409, 1452
BseRI	GAGGAG	2 cut(s)	464, 1318
BseSI	GKGCMC	1 cut(s)	1527
BseXI	GCAGC	2 cut(s)	513, 1012
BseYI	CCCAGC	3 cut(s)	611, 743, 1520
BsgI	GTGCAG	2 cut(s)	876, 1011
Bsh1285I	CGRYCG	1 cut(s)	1468
BshFI	GGCC	3 cut(s)	749, 1176, 1282
BshNI	GGYRCC	1 cut(s)	1205
BsiEI	CGRYCG	1 cut(s)	1468
BsiHKAI	GWGCWC	1 cut(s)	1364
BsiSI	CCGG	1 cut(s)	651
BslFI	GGGAC	1 cut(s)	112
BslI	CCNNNNNNNGG	2 cut(s)	196, 1414
BsmFI	GGGAC	1 cut(s)	112
BsnI	GGCC	3 cut(s)	749, 1176, 1282
Bsp1286I	GDGCHC	2 cut(s)	1364, 1527
Bsp1407I	TGTACA	1 cut(s)	267
Bsp143I	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
Bsp19I	CCATGG	1 cut(s)	1107
BspACI	CCGC	4 cut(s)	11, 31, 44, 77
BspANI	GGCC	3 cut(s)	749, 1176, 1282
BspCNI	CTCAG	2 cut(s)	625, 892
BspLI	GGNNCC	4 cut(s)	156, 748, 1105, 1207
BspMAI	CTGCAG	2 cut(s)	531, 922
BspPI	GGATC	3 cut(s)	330, 1098, 1111
BspQI	GCTCTTC	1 cut(s)	127
BspT107I	GGYRCC	1 cut(s)	1205
BsrGI	TGTACA	1 cut(s)	267
BsrI	ACTGG	6 cut(s)	505, 704, 953, 1283, 1409, 1452
BssECI	CCNNGG	2 cut(s)	1107, 1309
BssMI	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
BssNI	GRCGYC	1 cut(s)	162
BssT1I	CCWWGG	2 cut(s)	1107, 1309
Bst2UI	CCWGG	2 cut(s)	603, 662
Bst4CI	ACNGT	7 cut(s)	213, 254, 559, 981, 1007, 1082, 1348
Bst6I	CTCTTC	2 cut(s)	127, 1336
BstACI	GRCGYC	1 cut(s)	162
BstAPI	GCANNNNNTGC	1 cut(s)	280
BstAUI	TGTACA	1 cut(s)	267
BstC8I	GCNNGC	3 cut(s)	29, 75, 895
BstDEI	CTNAG	4 cut(s)	473, 633, 751, 900
BstDSI	CCRYGG	1 cut(s)	1107
BstF5I	GGATG	4 cut(s)	174, 796, 802, 1423
BstKTI	GATC	6 cut(s)	135, 242, 325, 409, 1106, 1468
BstMBI	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
BstMCI	CGRYCG	1 cut(s)	1468
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 280, 526, 875, 890, 949
BstNI	CCWGG	2 cut(s)	603, 662
BstSCI	CCNGG	2 cut(s)	601, 660
BstSFI	CTRYAG	3 cut(s)	410, 527, 918
BstSLI	GKGCMC	1 cut(s)	1527
BstV1I	GCAGC	2 cut(s)	513, 1012
BstV2I	GAAGAC	2 cut(s)	387, 999
BstX2I	RGATCY	3 cut(s)	322, 406, 1103
BstYI	RGATCY	3 cut(s)	322, 406, 1103
Bsu36I	CCTNAGG	1 cut(s)	900
BsuI	GTATCC	1 cut(s)	972
BsuRI	GGCC	3 cut(s)	749, 1176, 1282
BtgI	CCRYGG	1 cut(s)	1107
BtsCI	GGATG	4 cut(s)	174, 796, 802, 1423
BtsI	GCAGTG	1 cut(s)	1028
BtsIMutI	CAGTG	4 cut(s)	564, 697, 1028, 1459
Cac8I	GCNNGC	3 cut(s)	29, 75, 895
Cfr13I	GGNCC	4 cut(s)	154, 203, 747, 1280
Csp6I	GTAC	4 cut(s)	268, 508, 923, 1206
CspCI	CAANNNNNGTGG	4 cut(s)	544, 579, 955, 990
CviAII	CATG	7 cut(s)	243, 275, 319, 386, 1097, 1108, 1577
CviQI	GTAC	4 cut(s)	268, 508, 923, 1206
DdeI	CTNAG	4 cut(s)	473, 633, 751, 900
DpnI	GATC	6 cut(s)	134, 241, 324, 408, 1105, 1467
DpnII	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
DraI	TTTAAA	1 cut(s)	1077
DrdI	GACNNNNNNGTC	1 cut(s)	161
DseDI	GACNNNNNNGTC	1 cut(s)	161
Eam1104I	CTCTTC	2 cut(s)	127, 1336
EarI	CTCTTC	2 cut(s)	127, 1336
EciI	GGCGGA	1 cut(s)	92
Eco130I	CCWWGG	2 cut(s)	1107, 1309
Eco147I	AGGCCT	1 cut(s)	1176
Eco47I	GGWCC	2 cut(s)	154, 203
Eco57I	CTGAAG	3 cut(s)	27, 1160, 1317
Eco81I	CCTNAGG	1 cut(s)	900
EcoO109I	RGGNCCY	1 cut(s)	747
EcoRII	CCWGG	2 cut(s)	601, 660
EcoT14I	CCWWGG	2 cut(s)	1107, 1309
ErhI	CCWWGG	2 cut(s)	1107, 1309
FaeI	CATG	7 cut(s)	246, 278, 322, 389, 1100, 1111, 1580
FalI	AAGNNNNNCTT	4 cut(s)	50, 82, 414, 446
FaqI	GGGAC	1 cut(s)	112
FatI	CATG	7 cut(s)	242, 274, 318, 385, 1096, 1107, 1576
Fnu4HI	GCNGC	3 cut(s)	45, 527, 1026
FokI	GGATG	4 cut(s)	161, 803, 809, 1430
Fsp4HI	GCNGC	3 cut(s)	45, 527, 1026
FspBI	CTAG	1 cut(s)	260
GluI	GCNGC	3 cut(s)	45, 527, 1026
GsaI	CCCAGC	3 cut(s)	615, 747, 1524
HaeIII	GGCC	3 cut(s)	749, 1176, 1282
HapII	CCGG	1 cut(s)	651
Hin1I	GRCGYC	1 cut(s)	162
Hin1II	CATG	7 cut(s)	246, 278, 322, 389, 1100, 1111, 1580
HincII	GTYRAC	1 cut(s)	490
HindII	GTYRAC	1 cut(s)	490
HinfI	GANTC	7 cut(s)	665, 716, 755, 930, 1130, 1181, 1340
HpaII	CCGG	1 cut(s)	651
HphI	GGTGA	1 cut(s)	1208
Hpy166II	GTNNAC	4 cut(s)	16, 257, 490, 1223
Hpy188I	TCNGA	7 cut(s)	7, 357, 625, 678, 760, 1129, 1534
Hpy188III	TCNNGA	2 cut(s)	92, 218
Hpy8I	GTNNAC	4 cut(s)	16, 257, 490, 1223
Hpy99I	CGWCG	4 cut(s)	23, 164, 167, 1138
HpyAV	CCTTC	7 cut(s)	193, 194, 416, 764, 779, 815, 1135
HpyCH4III	ACNGT	7 cut(s)	213, 254, 559, 981, 1007, 1082, 1348
HpyCH4IV	ACGT	1 cut(s)	162
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 280, 526, 875, 890, 949
HpyF3I	CTNAG	4 cut(s)	473, 633, 751, 900
HpySE526I	ACGT	1 cut(s)	162
Hsp92I	GRCGYC	1 cut(s)	162
Hsp92II	CATG	7 cut(s)	246, 278, 322, 389, 1100, 1111, 1580
KpnI	GGTACC	1 cut(s)	1209
Kzo9I	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
LguI	GCTCTTC	1 cut(s)	127
LmnI	GCTCC	2 cut(s)	824, 1359
Lsp1109I	GCAGC	2 cut(s)	513, 1012
LweI	GCATC	2 cut(s)	384, 619
MaeI	CTAG	1 cut(s)	260
MaeII	ACGT	1 cut(s)	162
MaeIII	GTNAC	3 cut(s)	543, 640, 913
MalI	GATC	6 cut(s)	134, 241, 324, 408, 1105, 1467
MboI	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
MfeI	CAATTG	2 cut(s)	149, 1013
MflI	RGATCY	3 cut(s)	322, 406, 1103
MhlI	GDGCHC	2 cut(s)	1364, 1527
MluCI	AATT	9 cut(s)	142, 149, 458, 618, 1013, 1367, 1402, 1557, 1586
MlyI	GAGTC	4 cut(s)	749, 939, 1124, 1334
MmeI	TCCRAC	1 cut(s)	399
MnlI	CCTC	9 cut(s)	188, 190, 442, 448, 628, 895, 964, 1339, 1576
MroXI	GAANNNNTTC	2 cut(s)	65, 426
MseI	TTAA	3 cut(s)	585, 1076, 1370
MslI	CAYNNNNRTG	1 cut(s)	557
MspI	CCGG	1 cut(s)	651
MspR9I	CCNGG	2 cut(s)	603, 662
MssI	GTTTAAAC	1 cut(s)	1077
MunI	CAATTG	2 cut(s)	149, 1013
MvaI	CCWGG	2 cut(s)	603, 662
MwoI	GCNNNNNNNGC	6 cut(s)	83, 280, 526, 875, 890, 949
NcoI	CCATGG	1 cut(s)	1107
NdeII	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
NlaIII	CATG	7 cut(s)	246, 278, 322, 389, 1100, 1111, 1580
NlaIV	GGNNCC	4 cut(s)	156, 748, 1105, 1207
NmuCI	GTSAC	1 cut(s)	543
OliI	CACNNNNGTG	1 cut(s)	557
PceI	AGGCCT	1 cut(s)	1176
PciSI	GCTCTTC	1 cut(s)	127
PcsI	WCGNNNNNNNCGW	1 cut(s)	24
PdmI	GAANNNNTTC	2 cut(s)	65, 426
PfeI	GAWTC	3 cut(s)	665, 716, 1181
PfoI	TCCNGGA	1 cut(s)	601
PkrI	GCNGC	3 cut(s)	46, 528, 1027
Ple19I	CGATCG	1 cut(s)	1468
PleI	GAGTC	4 cut(s)	749, 938, 1124, 1334
PmeI	GTTTAAAC	1 cut(s)	1077
PpsI	GAGTC	4 cut(s)	749, 938, 1124, 1334
Psp6I	CCWGG	2 cut(s)	601, 660
PspFI	CCCAGC	3 cut(s)	611, 743, 1520
PspGI	CCWGG	2 cut(s)	601, 660
PspN4I	GGNNCC	4 cut(s)	156, 748, 1105, 1207
PspPI	GGNCC	4 cut(s)	154, 203, 747, 1280
PsrI	GAACNNNNNNTAC	2 cut(s)	1404, 1436
PstI	CTGCAG	2 cut(s)	531, 922
PsuI	RGATCY	3 cut(s)	322, 406, 1103
PvuI	CGATCG	1 cut(s)	1468
RsaI	GTAC	4 cut(s)	269, 509, 924, 1207
RsaNI	GTAC	4 cut(s)	268, 508, 923, 1206
RseI	CAYNNNNRTG	1 cut(s)	557
SapI	GCTCTTC	1 cut(s)	127
SaqAI	TTAA	3 cut(s)	585, 1076, 1370
SatI	GCNGC	3 cut(s)	45, 527, 1026
Sau3AI	GATC	6 cut(s)	132, 239, 322, 406, 1103, 1465
Sau96I	GGNCC	4 cut(s)	154, 203, 747, 1280
ScaI	AGTACT	1 cut(s)	509
SchI	GAGTC	4 cut(s)	749, 939, 1124, 1334
ScrFI	CCNGG	2 cut(s)	603, 662
SduI	GDGCHC	2 cut(s)	1364, 1527
SfaNI	GCATC	2 cut(s)	384, 619
SfcI	CTRYAG	3 cut(s)	410, 527, 918
SinI	GGWCC	2 cut(s)	154, 203
SmiMI	CAYNNNNRTG	1 cut(s)	557
SmlI	CTYRAG	1 cut(s)	997
SmoI	CTYRAG	1 cut(s)	997
Sse9I	AATT	9 cut(s)	142, 149, 458, 618, 1013, 1367, 1402, 1557, 1586
SseBI	AGGCCT	1 cut(s)	1176
SsiI	CCGC	4 cut(s)	11, 31, 44, 77
SspMI	CTAG	1 cut(s)	260
StuI	AGGCCT	1 cut(s)	1176
StyD4I	CCNGG	2 cut(s)	601, 660
StyI	CCWWGG	2 cut(s)	1107, 1309
TaaI	ACNGT	7 cut(s)	213, 254, 559, 981, 1007, 1082, 1348
TaiI	ACGT	1 cut(s)	165
TaqI	TCGA	2 cut(s)	711, 1468
TasI	AATT	9 cut(s)	142, 149, 458, 618, 1013, 1367, 1402, 1557, 1586
TatI	WGTACW	2 cut(s)	267, 507
TauI	GCSGC	1 cut(s)	47
TfiI	GAWTC	3 cut(s)	665, 716, 1181
Tru1I	TTAA	3 cut(s)	585, 1076, 1370
Tru9I	TTAA	3 cut(s)	585, 1076, 1370
TscAI	CASTG	4 cut(s)	564, 704, 1035, 1459
TseFI	GTSAC	1 cut(s)	543
TseI	GCWGC	2 cut(s)	526, 1025
Tsp45I	GTSAC	1 cut(s)	543
TspDTI	ATGAA	4 cut(s)	299, 307, 402, 1045
TspGWI	ACGGA	1 cut(s)	365
TspRI	CASTG	4 cut(s)	564, 704, 1035, 1459
VpaK11BI	GGWCC	2 cut(s)	154, 203
XapI	RAATTY	2 cut(s)	458, 1586
XcmI	CCANNNNNNNNNTGG	1 cut(s)	599
XmnI	GAANNNNTTC	2 cut(s)	65, 426
XspI	CTAG	1 cut(s)	260
ZraI	GACGTC	1 cut(s)	163
ZrmI	AGTACT	1 cut(s)	509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.