Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0008732

Physical Location & Seq

Genomic Coordinates Reverse (-)

44008800 .. 44010840

Gene Structure 2041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0289800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGCGGCCATCACTTGCTCCGCCTCGGACCTCCAGCCCCTCCTGGGCCCCAATGCCACCGCGGCTGCAGAATACATCTGCGGCCGCTTTGGTGCCGTGTCGAACAAGTTTGTCGACACGGGCTATGCAGTTGACAACACGTATCTTCTCTTCTCTGCCTATCTTGTTTTCGCCATGCAGCTCGGCTTTGCAATGCTCTGCGCCGGCTCCGTTCGTGCCAAAAACACCATGAACATTATGCTCACCAATGTCCTAGACGCTGCCACCGGCGGCATCTTCTACTATCTTTTCGGTTTTGCCTTTGCCTTTGGAACTCCCTCCAATGGCTTCATTGGCAAGCAATTCTTTGGTCTCAGCCATTTCCCTTCCCCCTCTTTCGACTACGGCTACTTCCTCTACCAATGGGCCTTTGCCATTGCGGCTGCCGGAATCACTAGTGGTTCAATCGCCGAAAGGACCCAATTCGTGGCCTATTTGATCTATTCATCTTTCTTGACAGGATTTGTGTACCCGATTGTGTCACATTGGTTTTGGTCTGCAGATGGATGGGCTAGCCCTGCTCGTGCTGAGAATCTCTTGTTTGGTTCTGGTGTGATTGACTTTGCAGGCTCCGGCGTTGTGCACTTGGTCGGAGGCATTGCCGGTTTGTGGGGTGCGCTGATCGAGGGGCCTAGGATCGGCCGGTTTGATCATGAAGGCCGGTCCGTGGCAATGCGTGGACATAGTGGCACATTGGTTGTTTTGGGCACATTTTTGTTGTGGTTTGGTTGGTATGGTTTCAATGCAGGTTCATTTCTCAACATATTGAAGGTTTATGGTGATAGTGGATCTTACTATGGACAATGGAGTGCTGTGGGCCGGACTGCTGTGACAACCACCTTGGCCGGATGTGCGGCAGCATTGACTACCCTCTTCGGAAAGCGCCTGCTCTCCGGGCACTGGAATGTCACTGATGTGTGCAATGGCTTGCTTGGCGGGTTCGCAGCTATTACATCTGGCTGTTCAGTGGTTGATCCTTGGGCAGCAATTATTTGTGGGATTGTGGCGGCTTGGGTTTTAATCGGGTGCAACAAGCTTGCCGAGAAGTTGAAGTATGATGACCCTTTGGAGGCTGCACAGCTTCATGGCGGGTGTGGGACGTGGGGGATCATATTCACGGCCTTGTTTGCCAAGAAGGCTTATGTGAATGAGGTCTATCCGGGGCACCCGGAGAGGCCATTTGGGCTGTTTATGGGAGGCAGTGCAAAACTCTTGGCTGCGCATTTGGTGCAGATTGTGGTGGTTGCGGGGTTTGTGAGTGTGACGATGGGGACATTGTTTTTCTTGCTGCACAAGTTGAAGCTGTTGAGGATTTCATCAGACGAGGAAATGGCAGGAATGGATGTGACGAGTCATGGAGGATTGGCTTATGTCTATACTGATGAAAGTGACCTGAAATCTGGATATATGGTGTCTAATACGGGTCCTCCACATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000228 GO:0000428 GO:0000785 GO:0000790 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005694 GO:0005856 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0015629 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030880 GO:0031248 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0033276 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044798 GO:0046483 GO:0046983 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902493 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05168 map03022 map05168

Pfam Domains

Protein Families

TFIID_NTD2 WD40

Protein Analysis

492

Amino Acids

52.42

Weight (kDa)

6.44

Isoelectric Point (pI)

18.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	48 - 470	1.6e-129	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25150 AT5G25150
fragaria_vesca	FvH4_2g41020 FvH4_2g41020 FvH4_2g41020 FvH4_2g41020 FvH4_2g41020
malus_domestica	MD00G1143300.v1.1 MD15G1039100.v1.1
prunus_persica	Prupe.1G392800_v2.0.a1 Prupe.1G392800_v2.0.a1
pyrus_communis	pycom08g04780
rosa_chinensis	RchiOBHm_Chr6g0299541
rosa_laevigata	RLG00000011417
rosa_multiflora	Rmu_sc0004064.1_g000008
rosa_roxburghii	Rroxscaffold_7G00168570
rosa_rugosa	Rorug06G0289700 Rorug06G0289800 Rorug06G0289900 Rorug06G0289900
rosa_samantha	Rh6AG401100 Rh6DG402200
rosa_wichuraiana	Rw6G035100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1260
Acc36I	ACCTGC	1 cut(s)	776
AccB1I	GGYRCC	2 cut(s)	92, 1203
AccB7I	CCANNNNNTGG	1 cut(s)	466
AccI	GTMKAC	1 cut(s)	114
AccII	CGCG	1 cut(s)	62
AclWI	GGATC	4 cut(s)	683, 835, 1007, 1154
AcoI	YGGCCR	4 cut(s)	6, 82, 679, 882
AfaI	GTAC	1 cut(s)	509
AfiI	CCNNNNNNNGG	8 cut(s)	44, 323, 466, 648, 677, 706, 939, 1108
AflIII	ACRYGT	2 cut(s)	138, 1471
AgsI	TTSAA	5 cut(s)	444, 781, 808, 1090, 1339
AhlI	ACTAGT	1 cut(s)	434
AjiI	CACGTC	1 cut(s)	1140
AjnI	CCWGG	1 cut(s)	42
AleI	CACNNNNGTG	1 cut(s)	953
AluBI	AGCT	5 cut(s)	181, 986, 1075, 1120, 1342
AluI	AGCT	5 cut(s)	181, 986, 1075, 1120, 1342
Alw21I	GWGCWC	1 cut(s)	624
Alw26I	GTCTC	1 cut(s)	356
Alw44I	GTGCAC	1 cut(s)	620
AlwI	GGATC	4 cut(s)	683, 835, 1007, 1154
ApaI	GGGCCC	1 cut(s)	50
ApaLI	GTGCAC	1 cut(s)	620
AspA2I	CCTAGG	1 cut(s)	671
AspLEI	GCGC	4 cut(s)	203, 658, 924, 1261
AspS9I	GGNCC	9 cut(s)	28, 46, 47, 405, 456, 668, 702, 856, 1463
AsuC2I	CCSGG	3 cut(s)	934, 1200, 1208
AsuHPI	GGTGA	2 cut(s)	235, 830
AsuNHI	GCTAGC	1 cut(s)	551
AvaII	GGWCC	4 cut(s)	28, 456, 702, 1463
AvrII	CCTAGG	1 cut(s)	671
BaeGI	GKGCMC	5 cut(s)	50, 624, 749, 939, 1206
BanI	GGYRCC	2 cut(s)	92, 1203
BanII	GRGCYC	1 cut(s)	50
BarI	GAAGNNNNNNTAC	2 cut(s)	134, 166
BauI	CACGAG	1 cut(s)	561
Bbv12I	GWGCWC	1 cut(s)	624
BccI	CCATC	4 cut(s)	17, 536, 540, 1300
BceAI	ACGGC	3 cut(s)	80, 400, 1173
BciT130I	CCWGG	1 cut(s)	44
BclI	TGATCA	1 cut(s)	688
BcnI	CCSGG	3 cut(s)	934, 1200, 1208
BcoDI	GTCTC	1 cut(s)	356
BcuI	ACTAGT	1 cut(s)	434
BfaI	CTAG	4 cut(s)	254, 435, 552, 672
BfmI	CTRYAG	2 cut(s)	66, 537
BfoI	RGCGCY	1 cut(s)	925
BfuAI	ACCTGC	1 cut(s)	776
BglI	GCCNNNNNGGC	4 cut(s)	62, 419, 1175, 1222
BlnI	CCTAGG	1 cut(s)	671
Bme1390I	CCNGG	4 cut(s)	44, 934, 1200, 1208
Bme18I	GGWCC	4 cut(s)	28, 456, 702, 1463
BmgBI	CACGTC	1 cut(s)	1140
BmgT120I	GGNCC	9 cut(s)	28, 46, 47, 405, 456, 668, 702, 856, 1463
BmiI	GGNNCC	9 cut(s)	48, 49, 94, 208, 458, 610, 669, 1205, 1464
BmrFI	CCNGG	4 cut(s)	44, 934, 1200, 1208
BmsI	GCATC	1 cut(s)	282
BmtI	GCTAGC	1 cut(s)	555
BpmI	CTGGAG	1 cut(s)	17
BpuMI	CCSGG	3 cut(s)	934, 1200, 1208
BsaAI	YACGTR	1 cut(s)	141
BsaI	GGTCTC	1 cut(s)	356
BsaJI	CCNNGG	8 cut(s)	24, 43, 60, 671, 705, 879, 1016, 1199
BsaXI	ACNNNNNCTCC	1 cut(s)	1450
Bsc4I	CCNNNNNNNGG	8 cut(s)	44, 323, 466, 648, 677, 706, 939, 1108
Bse118I	RCCGGY	5 cut(s)	203, 266, 641, 681, 699
Bse1I	ACTGG	1 cut(s)	944
Bse3DI	GCAATG	5 cut(s)	198, 414, 636, 717, 967
BseBI	CCWGG	1 cut(s)	44
BseDI	CCNNGG	8 cut(s)	24, 43, 60, 671, 705, 879, 1016, 1199
BseGI	GGATG	3 cut(s)	551, 893, 1387
BseLI	CCNNNNNNNGG	8 cut(s)	44, 323, 466, 648, 677, 706, 939, 1108
BseMI	GCAATG	5 cut(s)	198, 414, 636, 717, 967
BseMII	CTCAG	2 cut(s)	367, 558
BseNI	ACTGG	1 cut(s)	944
BseSI	GKGCMC	5 cut(s)	50, 624, 749, 939, 1206
BseX3I	CGGCCG	2 cut(s)	82, 679
BsgI	GTGCAG	3 cut(s)	1098, 1289, 1313
Bsh1236I	CGCG	1 cut(s)	62
Bsh1285I	CGRYCG	2 cut(s)	85, 682
BshNI	GGYRCC	2 cut(s)	92, 1203
BsiEI	CGRYCG	2 cut(s)	85, 682
BsiHKAI	GWGCWC	1 cut(s)	624
BslFI	GGGAC	2 cut(s)	1150, 1324
BslI	CCNNNNNNNGG	8 cut(s)	44, 323, 466, 648, 677, 706, 939, 1108
BsmAI	GTCTC	1 cut(s)	356
BsmFI	GGGAC	2 cut(s)	1150, 1324
Bso31I	GGTCTC	1 cut(s)	356
Bsp120I	GGGCCC	1 cut(s)	46
Bsp1286I	GDGCHC	5 cut(s)	50, 624, 749, 939, 1206
Bsp143I	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
BspCNI	CTCAG	2 cut(s)	366, 559
BspFNI	CGCG	1 cut(s)	62
BspHI	TCATGA	1 cut(s)	691
BspLI	GGNNCC	9 cut(s)	48, 49, 94, 208, 458, 610, 669, 1205, 1464
BspMAI	CTGCAG	2 cut(s)	70, 541
BspMI	ACCTGC	1 cut(s)	776
BspOI	GCTAGC	1 cut(s)	555
BspPI	GGATC	4 cut(s)	683, 835, 1007, 1154
BspT107I	GGYRCC	2 cut(s)	92, 1203
BspTNI	GGTCTC	1 cut(s)	356
BsrDI	GCAATG	5 cut(s)	198, 414, 636, 717, 967
BsrFI	RCCGGY	5 cut(s)	203, 266, 641, 681, 699
BsrI	ACTGG	1 cut(s)	944
BssAI	RCCGGY	5 cut(s)	203, 266, 641, 681, 699
BssECI	CCNNGG	8 cut(s)	24, 43, 60, 671, 705, 879, 1016, 1199
BssMI	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
BssSI	CACGAG	1 cut(s)	561
BssT1I	CCWWGG	3 cut(s)	671, 879, 1016
Bst2BI	CACGAG	1 cut(s)	561
Bst2UI	CCWGG	1 cut(s)	44
Bst6I	CTCTTC	2 cut(s)	155, 917
BstAPI	GCANNNNNTGC	1 cut(s)	1267
BstBAI	YACGTR	1 cut(s)	141
BstC8I	GCNNGC	7 cut(s)	205, 338, 553, 607, 926, 968, 1077
BstDEI	CTNAG	2 cut(s)	353, 567
BstDSI	CCRYGG	2 cut(s)	60, 705
BstF5I	GGATG	3 cut(s)	551, 893, 1387
BstFNI	CGCG	1 cut(s)	62
BstH2I	RGCGCY	1 cut(s)	925
BstHHI	GCGC	4 cut(s)	203, 658, 924, 1261
BstKTI	GATC	7 cut(s)	480, 663, 678, 691, 830, 1015, 1149
BstMAI	GTCTC	1 cut(s)	356
BstMBI	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
BstMCI	CGRYCG	2 cut(s)	85, 682
BstNI	CCWGG	1 cut(s)	44
BstNSI	RCATGY	1 cut(s)	1475
BstSCI	CCNGG	4 cut(s)	42, 932, 1198, 1206
BstSFI	CTRYAG	2 cut(s)	66, 537
BstSLI	GKGCMC	5 cut(s)	50, 624, 749, 939, 1206
BstUI	CGCG	1 cut(s)	62
BstX2I	RGATCY	1 cut(s)	827
BstYI	RGATCY	1 cut(s)	827
BstZI	CGGCCG	2 cut(s)	82, 679
BtgI	CCRYGG	2 cut(s)	60, 705
BtrI	CACGTC	1 cut(s)	1140
BtsCI	GGATG	3 cut(s)	551, 893, 1387
BtsI	GCAGTG	1 cut(s)	1246
BtsIMutI	CAGTG	4 cut(s)	937, 948, 1011, 1246
BveI	ACCTGC	1 cut(s)	776
Cac8I	GCNNGC	7 cut(s)	205, 338, 553, 607, 926, 968, 1077
CciI	TCATGA	1 cut(s)	691
CciNI	GCGGCCGC	1 cut(s)	82
CfoI	GCGC	4 cut(s)	203, 658, 924, 1261
Cfr10I	RCCGGY	5 cut(s)	203, 266, 641, 681, 699
Cfr13I	GGNCC	9 cut(s)	28, 46, 47, 405, 456, 668, 702, 856, 1463
Cfr42I	CCGCGG	1 cut(s)	63
CpoI	CGGWCCG	1 cut(s)	702
CseI	GACGC	1 cut(s)	266
Csp6I	GTAC	1 cut(s)	508
CspI	CGGWCCG	1 cut(s)	702
CviAII	CATG	6 cut(s)	175, 229, 692, 1124, 1394, 1472
CviQI	GTAC	1 cut(s)	508
DdeI	CTNAG	2 cut(s)	353, 567
DpnI	GATC	7 cut(s)	479, 662, 677, 690, 829, 1014, 1148
DpnII	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
EaeI	YGGCCR	4 cut(s)	6, 82, 679, 882
EagI	CGGCCG	2 cut(s)	82, 679
Eam1104I	CTCTTC	2 cut(s)	155, 917
EarI	CTCTTC	2 cut(s)	155, 917
EciI	GGCGGA	1 cut(s)	10
EclXI	CGGCCG	2 cut(s)	82, 679
Eco130I	CCWWGG	3 cut(s)	671, 879, 1016
Eco24I	GRGCYC	1 cut(s)	50
Eco31I	GGTCTC	1 cut(s)	356
Eco47I	GGWCC	4 cut(s)	28, 456, 702, 1463
Eco52I	CGGCCG	2 cut(s)	82, 679
EcoO109I	RGGNCCY	4 cut(s)	47, 456, 668, 1463
EcoRII	CCWGG	1 cut(s)	42
EcoT14I	CCWWGG	3 cut(s)	671, 879, 1016
EcoT38I	GRGCYC	1 cut(s)	50
ErhI	CCWWGG	3 cut(s)	671, 879, 1016
FaeI	CATG	6 cut(s)	178, 232, 695, 1127, 1397, 1475
FalI	AAGNNNNNCTT	2 cut(s)	329, 361
FaqI	GGGAC	2 cut(s)	1150, 1324
FatI	CATG	6 cut(s)	174, 228, 691, 1123, 1393, 1471
FauI	CCCGC	3 cut(s)	968, 1121, 1279
FbaI	TGATCA	1 cut(s)	688
FblI	GTMKAC	1 cut(s)	114
FokI	GGATG	3 cut(s)	558, 900, 1394
FriOI	GRGCYC	1 cut(s)	50
FspBI	CTAG	4 cut(s)	254, 435, 552, 672
FspI	TGCGCA	1 cut(s)	1260
GlaI	GCGC	4 cut(s)	202, 657, 923, 1260
GsuI	CTGGAG	1 cut(s)	17
HaeII	RGCGCY	1 cut(s)	925
HgaI	GACGC	1 cut(s)	266
HhaI	GCGC	4 cut(s)	203, 658, 924, 1261
Hin1II	CATG	6 cut(s)	178, 232, 695, 1127, 1397, 1475
Hin6I	GCGC	4 cut(s)	201, 656, 922, 1259
HinP1I	GCGC	4 cut(s)	201, 656, 922, 1259
HincII	GTYRAC	2 cut(s)	115, 133
HindII	GTYRAC	2 cut(s)	115, 133
HindIII	AAGCTT	1 cut(s)	1073
HinfI	GANTC	3 cut(s)	429, 571, 1390
HphI	GGTGA	2 cut(s)	235, 830
Hpy166II	GTNNAC	5 cut(s)	115, 133, 508, 622, 719
Hpy188I	TCNGA	4 cut(s)	28, 632, 917, 1360
Hpy188III	TCNNGA	3 cut(s)	493, 692, 1440
Hpy8I	GTNNAC	5 cut(s)	115, 133, 508, 622, 719
HpyAV	CCTTC	4 cut(s)	375, 689, 802, 1168
HpyCH4IV	ACGT	2 cut(s)	140, 1139
HpyF3I	CTNAG	2 cut(s)	353, 567
HpySE526I	ACGT	2 cut(s)	140, 1139
Hsp92II	CATG	6 cut(s)	178, 232, 695, 1127, 1397, 1475
HspAI	GCGC	4 cut(s)	201, 656, 922, 1259
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
Ksp22I	TGATCA	1 cut(s)	688
KspI	CCGCGG	1 cut(s)	63
Kzo9I	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
LmnI	GCTCC	3 cut(s)	23, 212, 614
LweI	GCATC	1 cut(s)	282
MaeI	CTAG	4 cut(s)	254, 435, 552, 672
MaeII	ACGT	2 cut(s)	140, 1139
MaeIII	GTNAC	6 cut(s)	519, 868, 946, 1300, 1384, 1427
MalI	GATC	7 cut(s)	479, 662, 677, 690, 829, 1014, 1148
MboI	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
MboII	GAAGA	4 cut(s)	137, 142, 268, 904
MflI	RGATCY	1 cut(s)	827
MhlI	GDGCHC	5 cut(s)	50, 624, 749, 939, 1206
MluCI	AATT	3 cut(s)	341, 461, 1026
MlyI	GAGTC	1 cut(s)	1399
MmeI	TCCRAC	1 cut(s)	610
MroNI	GCCGGC	1 cut(s)	203
MseI	TTAA	1 cut(s)	1058
MslI	CAYNNNNRTG	2 cut(s)	942, 953
MspA1I	CMGCKG	1 cut(s)	62
MspR9I	CCNGG	4 cut(s)	44, 934, 1200, 1208
MvaI	CCWGG	1 cut(s)	44
MvnI	CGCG	1 cut(s)	62
NaeI	GCCGGC	1 cut(s)	205
NciI	CCSGG	3 cut(s)	934, 1200, 1208
NdeII	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
NgoMIV	GCCGGC	1 cut(s)	203
NheI	GCTAGC	1 cut(s)	551
NlaIII	CATG	6 cut(s)	178, 232, 695, 1127, 1397, 1475
NlaIV	GGNNCC	9 cut(s)	48, 49, 94, 208, 458, 610, 669, 1205, 1464
NmeAIII	GCCGAG	2 cut(s)	162, 1105
NmuCI	GTSAC	6 cut(s)	519, 868, 946, 1300, 1384, 1427
NotI	GCGGCCGC	1 cut(s)	82
NsbI	TGCGCA	1 cut(s)	1260
NspI	RCATGY	1 cut(s)	1475
OliI	CACNNNNGTG	1 cut(s)	953
PagI	TCATGA	1 cut(s)	691
PciI	ACATGT	1 cut(s)	1471
PdiI	GCCGGC	1 cut(s)	205
PfeI	GAWTC	2 cut(s)	429, 571
PflMI	CCANNNNNTGG	1 cut(s)	466
PleI	GAGTC	1 cut(s)	1398
PpsI	GAGTC	1 cut(s)	1398
Ppu21I	YACGTR	1 cut(s)	141
PpuMI	RGGWCCY	2 cut(s)	456, 1463
PscI	ACATGT	1 cut(s)	1471
Psp5II	RGGWCCY	2 cut(s)	456, 1463
Psp6I	CCWGG	1 cut(s)	42
PspGI	CCWGG	1 cut(s)	42
PspN4I	GGNNCC	9 cut(s)	48, 49, 94, 208, 458, 610, 669, 1205, 1464
PspOMI	GGGCCC	1 cut(s)	46
PspPI	GGNCC	9 cut(s)	28, 46, 47, 405, 456, 668, 702, 856, 1463
PspPPI	RGGWCCY	2 cut(s)	456, 1463
PstI	CTGCAG	2 cut(s)	70, 541
PsuI	RGATCY	1 cut(s)	827
RsaI	GTAC	1 cut(s)	509
RsaNI	GTAC	1 cut(s)	508
RseI	CAYNNNNRTG	2 cut(s)	942, 953
Rsr2I	CGGWCCG	1 cut(s)	702
RsrII	CGGWCCG	1 cut(s)	702
SacII	CCGCGG	1 cut(s)	63
SalI	GTCGAC	1 cut(s)	113
SaqAI	TTAA	1 cut(s)	1058
Sau3AI	GATC	7 cut(s)	477, 660, 675, 688, 827, 1012, 1146
Sau96I	GGNCC	9 cut(s)	28, 46, 47, 405, 456, 668, 702, 856, 1463
SchI	GAGTC	1 cut(s)	1399
ScrFI	CCNGG	4 cut(s)	44, 934, 1200, 1208
SduI	GDGCHC	5 cut(s)	50, 624, 749, 939, 1206
SfaNI	GCATC	1 cut(s)	282
SfcI	CTRYAG	2 cut(s)	66, 537
Sfr303I	CCGCGG	1 cut(s)	63
SgrAI	CRCCGGYG	1 cut(s)	266
SgrBI	CCGCGG	1 cut(s)	63
SinI	GGWCC	4 cut(s)	28, 456, 702, 1463
SmiMI	CAYNNNNRTG	2 cut(s)	942, 953
SpeI	ACTAGT	1 cut(s)	434
Sse9I	AATT	3 cut(s)	341, 461, 1026
SspMI	CTAG	4 cut(s)	254, 435, 552, 672
StyD4I	CCNGG	4 cut(s)	42, 932, 1198, 1206
StyI	CCWWGG	3 cut(s)	671, 879, 1016
TaiI	ACGT	2 cut(s)	143, 1142
TaqI	TCGA	4 cut(s)	101, 114, 378, 663
TasI	AATT	3 cut(s)	341, 461, 1026
TauI	GCSGC	8 cut(s)	8, 65, 84, 87, 273, 422, 896, 1049
TfiI	GAWTC	2 cut(s)	429, 571
Tru1I	TTAA	1 cut(s)	1058
Tru9I	TTAA	1 cut(s)	1058
TscAI	CASTG	4 cut(s)	944, 955, 1011, 1246
TseFI	GTSAC	6 cut(s)	519, 868, 946, 1300, 1384, 1427
Tsp45I	GTSAC	6 cut(s)	519, 868, 946, 1300, 1384, 1427
TspDTI	ATGAA	8 cut(s)	245, 319, 474, 708, 780, 1112, 1344, 1437
TspGWI	ACGGA	2 cut(s)	199, 694
TspRI	CASTG	4 cut(s)	944, 955, 1011, 1246
Van91I	CCANNNNNTGG	1 cut(s)	466
VneI	GTGCAC	1 cut(s)	620
VpaK11BI	GGWCC	4 cut(s)	28, 456, 702, 1463
XceI	RCATGY	1 cut(s)	1475
XmaJI	CCTAGG	1 cut(s)	671
XmiI	GTMKAC	1 cut(s)	114
XspI	CTAG	4 cut(s)	254, 435, 552, 672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.