FvH4_2g41231

Folate-Biopterin Transporter

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
29217266 .. 29219780
2515 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g41231.t1

Sequence Viewer

Length: 1476 bp
ATGGTGGAGGAGGAAGAGGGTGGAATTGAAAATGAAACTAAAAGGAGGTGTTGTGAGGGTCCAAGTCCAATTCAATGGTTCAGAATGCTGTGCAGGGAAATGCATTGGAGCTTTGCATTAGGGGTTGTTGTTGTTTATGGAATAAGCCAAGGATTCGGTGGAGCTCTGTATCGGGTGGGCACAGAATATTACATGAAGGATGTTCTAAAGGTGCAGCCTTCTCAAGCTCAGTTTTATCAAGGAATTACTTCTATTCCATGGCTTGTCAAGCCTCTCTGGGGTCTCCTCACCGATGTTCTCCCTCTTTTTGGCTATCGAAGACGCCCTTATTTCATTCTAGCAGGTTCCATTGGCGTGATCGCTATGCTTGTTTTATCATTCCATGAAAAGCTGCATATTGCACTTGCCATCTTGGCATTGACAGTTGAAAGTGCTGGAGTAGCTGTAGCTGATGTCACCATAGATGCTTGTGTCGCACAGAACAGTATTACCCATCATTCACTTGCAGCCGATTTGCAAAGCCTGTGTGCCTTGAGCTCATCCATTGGAGCACTGTTGGGATTCTCTATTAGTGGTATATTTGTGCATCTTATAGGCCCAAAGGGGGTGTATGGCTTGTTGGCAATCCCATCTGGACTTGTATTTTTAATTGGAACTCTGATTAGGGAACCTCATTCTCCCAATTTCGCGTACACGCAGGTCAATCAGAAGTTTATTGATGCTGGTAAGTCTATGTGGACCACATTGAAATGCCCTGATGTATGGAGACCATGCTTATACATGTACTCATCACTTGCATTAAGCTTGAACATCCTTGATGGAATGTTCTACTGGTATACAGACTCAAAGGGAGGTCCATCATTCTCTCAGGAGAGCGTGGGATATATATTCTCTATAGGTTCAGTTGGTTCCATTTTGGGGGCAGTACTCTATCAGTATGTGCTAAAGGATCATCCTTTTCGGGACTTGCTCTTCTGGACTCAGTTGCTCTATGGTTTATCAGGAATGCTAGATTTGATGCTGGTCTTACGGTTGAATTTGAGATTTGGTATACCCGATTATTTCTTTGTTGTGATTGATGAAAGCGTATCGCAAATGACTTCAAGGCTCAAATGGATGCCTCTTCTGGTGCTCAGCTCAAAGCTGTGTCCCCCAGGAATTGAAGGAACGTTTTTTGCATTGTTGATGTCAATTGACAATGTTGGACTTCTGTCAGCGACTTGGGGAGGAGGCGCCCTGCTGCATGTATTGAAGGTGACACGAACACAATTCGATAATCTTTGGCTTGCTATTCTGATTAGGAATGTTTTGAGATTAACTCCACTGTGTCTGCTATTTTTGATACCTAGAGTTGATCCCAATTCTTCCATTCTTCCGACTGAAATCTTAAGTACAAAAGAGGATACTGAAATTGAAACTCCAGAAGCTGAGAACATTGAATTGGTTTCCCTTGTAAGCAGAGTTGATGGTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

492

Amino Acids

54.43

Weight (kDa)

5.88

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 50 - 452 3.8e-120 BT1 family
MFS_1 PF07690 51 - 403 7.1e-14 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 332, 688
AccB1I GGYRCC 1 cut(s) 1232
AccI GTMKAC 2 cut(s) 836, 1051
AccII CGCG 1 cut(s) 689
AclI AACGTT 1 cut(s) 1169
AclWI GGATC 2 cut(s) 957, 1349
AcsI RAATTY 1 cut(s) 1036
AcyI GRCGYC 2 cut(s) 322, 1233
AfaI GTAC 4 cut(s) 692, 785, 927, 1393
AfiI CCNNNNNNNGG 4 cut(s) 278, 308, 604, 918
AflII CTTAAG 1 cut(s) 1387
AflIII ACRYGT 1 cut(s) 780
AjnI CCWGG 1 cut(s) 1153
AjuI GAANNNNNNNTTGG 2 cut(s) 1424, 1456
Alw21I GWGCWC 4 cut(s) 166, 539, 553, 1134
Alw26I GTCTC 2 cut(s) 287, 760
AlwI GGATC 2 cut(s) 957, 1349
AlwNI CAGNNNCTG 1 cut(s) 1427
AoxI GGCC 1 cut(s) 595
ApeKI GCWGC 4 cut(s) 214, 391, 506, 1240
ApoI RAATTY 1 cut(s) 1036
Asp700I GAANNNNTTC 1 cut(s) 247
AspLEI GCGC 1 cut(s) 1235
AspS9I GGNCC 4 cut(s) 59, 596, 738, 854
AsuHPI GGTGA 3 cut(s) 280, 448, 1267
AvaII GGWCC 3 cut(s) 59, 738, 854
BaeGI GKGCMC 1 cut(s) 182
BanI GGYRCC 1 cut(s) 1232
BanII GRGCYC 2 cut(s) 166, 539
BbsI GAAGAC 1 cut(s) 325
Bbv12I GWGCWC 4 cut(s) 166, 539, 553, 1134
BbvI GCAGC 4 cut(s) 226, 378, 518, 1227
BccI CCATC 6 cut(s) 416, 501, 637, 812, 865, 1460
BciT130I CCWGG 1 cut(s) 1155
BciVI GTATCC 1 cut(s) 1396
BcoDI GTCTC 2 cut(s) 287, 760
BfaI CTAG 3 cut(s) 338, 1010, 1347
BfmI CTRYAG 2 cut(s) 444, 894
BfoI RGCGCY 1 cut(s) 1236
BfrI CTTAAG 1 cut(s) 1387
BfuAI ACCTGC 2 cut(s) 332, 688
BfuI GTATCC 1 cut(s) 1396
BglI GCCNNNNNGGC 1 cut(s) 413
BisI GCNGC 4 cut(s) 215, 392, 507, 1241
BlpI GCTNAGC 1 cut(s) 1133
BlsI GCNGC 4 cut(s) 216, 393, 508, 1242
BmcAI AGTACT 1 cut(s) 927
Bme1390I CCNGG 1 cut(s) 1155
Bme18I GGWCC 3 cut(s) 59, 738, 854
BmgT120I GGNCC 4 cut(s) 59, 596, 738, 854
BmiI GGNNCC 5 cut(s) 60, 346, 669, 910, 1234
BmrFI CCNGG 1 cut(s) 1155
BmsI GCATC 5 cut(s) 454, 595, 709, 1008, 1107
BoxI GACNNNNGTC 1 cut(s) 1210
BpiI GAAGAC 1 cut(s) 325
BplI GAGNNNNNCTC 2 cut(s) 1303, 1335
BpmI CTGGAG 2 cut(s) 456, 1404
Bpu1102I GCTNAGC 1 cut(s) 1133
BpuEI CTTGAG 2 cut(s) 207, 553
BsaHI GRCGYC 2 cut(s) 322, 1233
BsaI GGTCTC 2 cut(s) 287, 760
BsaJI CCNNGG 3 cut(s) 148, 257, 1153
BsaXI ACNNNNNCTCC 4 cut(s) 37, 67, 429, 459
Bsc4I CCNNNNNNNGG 4 cut(s) 278, 308, 604, 918
Bse1I ACTGG 1 cut(s) 836
BseBI CCWGG 1 cut(s) 1155
BseDI CCNNGG 3 cut(s) 148, 257, 1153
BseGI GGATG 5 cut(s) 205, 539, 810, 952, 1122
BseLI CCNNNNNNNGG 4 cut(s) 278, 308, 604, 918
BseMII CTCAG 5 cut(s) 242, 881, 995, 1147, 1419
BseNI ACTGG 1 cut(s) 836
BseRI GAGGAG 3 cut(s) 23, 275, 1242
BseSI GKGCMC 1 cut(s) 182
BseXI GCAGC 4 cut(s) 226, 378, 518, 1227
BsgI GTGCAG 2 cut(s) 112, 233
Bsh1236I CGCG 1 cut(s) 689
BshFI GGCC 1 cut(s) 597
BshNI GGYRCC 1 cut(s) 1232
BsiHKAI GWGCWC 4 cut(s) 166, 539, 553, 1134
BslFI GGGAC 2 cut(s) 977, 1134
BslI CCNNNNNNNGG 4 cut(s) 278, 308, 604, 918
BsmAI GTCTC 2 cut(s) 287, 760
BsmFI GGGAC 2 cut(s) 977, 1134
BsmI GAATGC 2 cut(s) 90, 1011
BsnI GGCC 1 cut(s) 597
Bso31I GGTCTC 2 cut(s) 287, 760
Bsp1286I GDGCHC 5 cut(s) 166, 182, 539, 553, 1134
Bsp143I GATC 3 cut(s) 357, 949, 1354
Bsp1720I GCTNAGC 1 cut(s) 1133
Bsp19I CCATGG 1 cut(s) 257
BspANI GGCC 1 cut(s) 597
BspCNI CTCAG 5 cut(s) 241, 880, 994, 1146, 1420
BspFNI CGCG 1 cut(s) 689
BspLI GGNNCC 5 cut(s) 60, 346, 669, 910, 1234
BspMI ACCTGC 2 cut(s) 332, 688
BspPI GGATC 2 cut(s) 957, 1349
BspQI GCTCTTC 1 cut(s) 977
BspT107I GGYRCC 1 cut(s) 1232
BspTI CTTAAG 1 cut(s) 1387
BspTNI GGTCTC 2 cut(s) 287, 760
BsrI ACTGG 1 cut(s) 836
BssECI CCNNGG 3 cut(s) 148, 257, 1153
BssMI GATC 3 cut(s) 357, 949, 1354
BssNAI GTATAC 2 cut(s) 837, 1052
BssNI GRCGYC 2 cut(s) 322, 1233
BssT1I CCWWGG 2 cut(s) 148, 257
Bst1107I GTATAC 2 cut(s) 837, 1052
Bst2UI CCWGG 1 cut(s) 1155
Bst4CI ACNGT 5 cut(s) 424, 485, 555, 1032, 1326
Bst6I CTCTTC 3 cut(s) 9, 977, 1128
BstACI GRCGYC 2 cut(s) 322, 1233
BstAFI CTTAAG 1 cut(s) 1387
BstC8I GCNNGC 1 cut(s) 1287
BstDEI CTNAG 5 cut(s) 228, 867, 981, 1133, 1428
BstDSI CCRYGG 1 cut(s) 257
BstF5I GGATG 5 cut(s) 205, 539, 810, 952, 1122
BstFNI CGCG 1 cut(s) 689
BstH2I RGCGCY 1 cut(s) 1236
BstHHI GCGC 1 cut(s) 1235
BstKTI GATC 3 cut(s) 360, 952, 1357
BstMAI GTCTC 2 cut(s) 287, 760
BstMBI GATC 3 cut(s) 357, 949, 1354
BstMWI GCNNNNNNNGC 4 cut(s) 268, 413, 440, 473
BstNI CCWGG 1 cut(s) 1155
BstNSI RCATGY 2 cut(s) 784, 1247
BstPAI GACNNNNGTC 1 cut(s) 1210
BstSCI CCNGG 1 cut(s) 1153
BstSFI CTRYAG 2 cut(s) 444, 894
BstSLI GKGCMC 1 cut(s) 182
BstUI CGCG 1 cut(s) 689
BstV1I GCAGC 4 cut(s) 226, 378, 518, 1227
BstV2I GAAGAC 1 cut(s) 325
BstXI CCANNNNNNTGG 1 cut(s) 75
BstZ17I GTATAC 2 cut(s) 837, 1052
BsuI GTATCC 1 cut(s) 1396
BsuRI GGCC 1 cut(s) 597
BtgI CCRYGG 1 cut(s) 257
BtsCI GGATG 5 cut(s) 205, 539, 810, 952, 1122
BtsIMutI CAGTG 2 cut(s) 551, 1322
BveI ACCTGC 2 cut(s) 332, 688
Cac8I GCNNGC 1 cut(s) 1287
CaiI CAGNNNCTG 1 cut(s) 1427
CfoI GCGC 1 cut(s) 1235
Cfr13I GGNCC 4 cut(s) 59, 596, 738, 854
CseI GACGC 1 cut(s) 330
Csp6I GTAC 4 cut(s) 691, 784, 926, 1392
CviAII CATG 6 cut(s) 193, 258, 383, 771, 781, 1244
CviQI GTAC 4 cut(s) 691, 784, 926, 1392
DdeI CTNAG 5 cut(s) 228, 867, 981, 1133, 1428
DinI GGCGCC 1 cut(s) 1234
DpnI GATC 3 cut(s) 359, 951, 1356
DpnII GATC 3 cut(s) 357, 949, 1354
Eam1104I CTCTTC 3 cut(s) 9, 977, 1128
EarI CTCTTC 3 cut(s) 9, 977, 1128
Ecl136II GAGCTC 2 cut(s) 164, 537
Eco130I CCWWGG 2 cut(s) 148, 257
Eco24I GRGCYC 2 cut(s) 166, 539
Eco31I GGTCTC 2 cut(s) 287, 760
Eco47I GGWCC 3 cut(s) 59, 738, 854
Eco53kI GAGCTC 2 cut(s) 164, 537
EcoICRI GAGCTC 2 cut(s) 164, 537
EcoRII CCWGG 1 cut(s) 1153
EcoT14I CCWWGG 2 cut(s) 148, 257
EcoT22I ATGCAT 1 cut(s) 105
EcoT38I GRGCYC 2 cut(s) 166, 539
EgeI GGCGCC 1 cut(s) 1234
EheI GGCGCC 1 cut(s) 1234
ErhI CCWWGG 2 cut(s) 148, 257
FaeI CATG 6 cut(s) 196, 261, 386, 774, 784, 1247
FalI AAGNNNNNCTT 2 cut(s) 310, 342
FaqI GGGAC 2 cut(s) 977, 1134
FatI CATG 6 cut(s) 192, 257, 382, 770, 780, 1243
FblI GTMKAC 2 cut(s) 836, 1051
Fnu4HI GCNGC 4 cut(s) 215, 392, 507, 1241
FokI GGATG 5 cut(s) 212, 526, 797, 939, 1129
FriOI GRGCYC 2 cut(s) 166, 539
Fsp4HI GCNGC 4 cut(s) 215, 392, 507, 1241
FspBI CTAG 3 cut(s) 338, 1010, 1347
GlaI GCGC 1 cut(s) 1234
GluI GCNGC 4 cut(s) 215, 392, 507, 1241
GsuI CTGGAG 2 cut(s) 456, 1404
HaeII RGCGCY 1 cut(s) 1236
HaeIII GGCC 1 cut(s) 597
HgaI GACGC 1 cut(s) 330
HhaI GCGC 1 cut(s) 1235
Hin1I GRCGYC 2 cut(s) 322, 1233
Hin1II CATG 6 cut(s) 196, 261, 386, 774, 784, 1247
Hin6I GCGC 1 cut(s) 1233
HinP1I GCGC 1 cut(s) 1233
HindIII AAGCTT 1 cut(s) 802
HinfI GANTC 4 cut(s) 153, 561, 842, 979
HphI GGTGA 3 cut(s) 280, 448, 1267
Hpy166II GTNNAC 4 cut(s) 693, 738, 837, 1052
Hpy188I TCNGA 5 cut(s) 83, 660, 708, 1296, 1377
Hpy188III TCNNGA 6 cut(s) 633, 869, 962, 976, 1002, 1421
Hpy8I GTNNAC 4 cut(s) 693, 738, 837, 1052
HpyAV CCTTC 4 cut(s) 190, 228, 1157, 1246
HpyCH4III ACNGT 5 cut(s) 424, 485, 555, 1032, 1326
HpyCH4IV ACGT 1 cut(s) 1169
HpyF10VI GCNNNNNNNGC 4 cut(s) 268, 413, 440, 473
HpyF3I CTNAG 5 cut(s) 228, 867, 981, 1133, 1428
HpySE526I ACGT 1 cut(s) 1169
Hsp92I GRCGYC 2 cut(s) 322, 1233
Hsp92II CATG 6 cut(s) 196, 261, 386, 774, 784, 1247
HspAI GCGC 1 cut(s) 1233
KasI GGCGCC 1 cut(s) 1232
Kzo9I GATC 3 cut(s) 357, 949, 1354
LguI GCTCTTC 1 cut(s) 977
LmnI GCTCC 3 cut(s) 108, 161, 548
Lsp1109I GCAGC 4 cut(s) 226, 378, 518, 1227
LweI GCATC 5 cut(s) 454, 595, 709, 1008, 1107
MaeI CTAG 3 cut(s) 338, 1010, 1347
MaeII ACGT 1 cut(s) 1169
MaeIII GTNAC 2 cut(s) 454, 1255
MalI GATC 3 cut(s) 359, 951, 1356
MboI GATC 3 cut(s) 357, 949, 1354
MboII GAAGA 6 cut(s) 26, 330, 964, 1115, 1356, 1364
MfeI CAATTG 1 cut(s) 1191
MhlI GDGCHC 5 cut(s) 166, 182, 539, 553, 1134
Mly113I GGCGCC 1 cut(s) 1233
MlyI GAGTC 2 cut(s) 836, 973
MmeI TCCRAC 2 cut(s) 1183, 1400
Mph1103I ATGCAT 1 cut(s) 105
MroXI GAANNNNTTC 1 cut(s) 247
MseI TTAA 4 cut(s) 647, 800, 1316, 1388
MslI CAYNNNNRTG 2 cut(s) 353, 748
MspCI CTTAAG 1 cut(s) 1387
MspR9I CCNGG 1 cut(s) 1155
MunI CAATTG 1 cut(s) 1191
Mva1269I GAATGC 2 cut(s) 90, 1011
MvaI CCWGG 1 cut(s) 1155
MvnI CGCG 1 cut(s) 689
MwoI GCNNNNNNNGC 4 cut(s) 268, 413, 440, 473
NarI GGCGCC 1 cut(s) 1233
NcoI CCATGG 1 cut(s) 257
NdeII GATC 3 cut(s) 357, 949, 1354
NlaIII CATG 6 cut(s) 196, 261, 386, 774, 784, 1247
NlaIV GGNNCC 5 cut(s) 60, 346, 669, 910, 1234
NmuCI GTSAC 2 cut(s) 454, 1255
NsiI ATGCAT 1 cut(s) 105
NspI RCATGY 2 cut(s) 784, 1247
PciI ACATGT 1 cut(s) 780
PciSI GCTCTTC 1 cut(s) 977
PctI GAATGC 2 cut(s) 90, 1011
PdmI GAANNNNTTC 1 cut(s) 247
PfeI GAWTC 2 cut(s) 153, 561
PkrI GCNGC 4 cut(s) 216, 393, 508, 1242
PleI GAGTC 2 cut(s) 836, 973
PluTI GGCGCC 1 cut(s) 1236
PpsI GAGTC 2 cut(s) 836, 973
PscI ACATGT 1 cut(s) 780
PshAI GACNNNNGTC 1 cut(s) 1210
Psp124BI GAGCTC 2 cut(s) 166, 539
Psp1406I AACGTT 1 cut(s) 1169
Psp6I CCWGG 1 cut(s) 1153
PspGI CCWGG 1 cut(s) 1153
PspN4I GGNNCC 5 cut(s) 60, 346, 669, 910, 1234
PspPI GGNCC 4 cut(s) 59, 596, 738, 854
PstNI CAGNNNCTG 1 cut(s) 1427
RsaI GTAC 4 cut(s) 692, 785, 927, 1393
RsaNI GTAC 4 cut(s) 691, 784, 926, 1392
RseI CAYNNNNRTG 2 cut(s) 353, 748
SacI GAGCTC 2 cut(s) 166, 539
SapI GCTCTTC 1 cut(s) 977
SaqAI TTAA 4 cut(s) 647, 800, 1316, 1388
SatI GCNGC 4 cut(s) 215, 392, 507, 1241
Sau3AI GATC 3 cut(s) 357, 949, 1354
Sau96I GGNCC 4 cut(s) 59, 596, 738, 854
ScaI AGTACT 1 cut(s) 927
SchI GAGTC 2 cut(s) 836, 973
ScrFI CCNGG 1 cut(s) 1155
SduI GDGCHC 5 cut(s) 166, 182, 539, 553, 1134
SfaNI GCATC 5 cut(s) 454, 595, 709, 1008, 1107
SfcI CTRYAG 2 cut(s) 444, 894
SfoI GGCGCC 1 cut(s) 1234
SinI GGWCC 3 cut(s) 59, 738, 854
SmiMI CAYNNNNRTG 2 cut(s) 353, 748
SmlI CTYRAG 3 cut(s) 222, 532, 1387
SmoI CTYRAG 3 cut(s) 222, 532, 1387
SspDI GGCGCC 1 cut(s) 1232
SspI AATATT 1 cut(s) 188
SspMI CTAG 3 cut(s) 338, 1010, 1347
SstI GAGCTC 2 cut(s) 166, 539
StyD4I CCNGG 1 cut(s) 1153
StyI CCWWGG 2 cut(s) 148, 257
TaaI ACNGT 5 cut(s) 424, 485, 555, 1032, 1326
TaiI ACGT 1 cut(s) 1172
TaqI TCGA 2 cut(s) 316, 1272
TatI WGTACW 3 cut(s) 783, 925, 1391
TfiI GAWTC 2 cut(s) 153, 561
Tru1I TTAA 4 cut(s) 647, 800, 1316, 1388
Tru9I TTAA 4 cut(s) 647, 800, 1316, 1388
TscAI CASTG 2 cut(s) 558, 1329
TseFI GTSAC 2 cut(s) 454, 1255
TseI GCWGC 4 cut(s) 214, 391, 506, 1240
Tsp45I GTSAC 2 cut(s) 454, 1255
TspDTI ATGAA 5 cut(s) 48, 209, 322, 399, 1095
TspRI CASTG 2 cut(s) 558, 1329
Vha464I CTTAAG 1 cut(s) 1387
VpaK11BI GGWCC 3 cut(s) 59, 738, 854
XapI RAATTY 1 cut(s) 1036
XceI RCATGY 2 cut(s) 784, 1247
XcmI CCANNNNNNNNNTGG 1 cut(s) 155
XmiI GTMKAC 2 cut(s) 836, 1051
XmnI GAANNNNTTC 1 cut(s) 247
XspI CTAG 3 cut(s) 338, 1010, 1347
ZrmI AGTACT 1 cut(s) 927
Zsp2I ATGCAT 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.