Rh6AG398100

Folate-Biopterin Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0008245
Physical Location & Seq
Forward (+)
59647310 .. 59647690
381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG398100.1

Sequence Viewer

Length: 381 bp
ATGATGGTGGAGGAGGAAGAAGAACTCAAACCCTGCGGTGGAATTGATGTTGCAGAAGAAAATGAAACGAAGAGGAGGTGTTGTGATGGTCCAAGTCCAATCCAATGGTTCAGGATGCTGTGTAGGGAACTGCATTGGAGTTTTGTGTTAGGGGTGGTTGTTGTTTATGGAATAAGTCAAGGATTTGGTGGAGCTATGTACCGGGTGGGCACAGAATATTACATGAAGGATGTTCAAAAGGTGCAGCCTTCTCAAGCCCAATTTTATCAAGGAATTACTTCCATTCCATGGCTTGTCAAGCCTCTCTGGGGTCTCCTCACCGATGTTCTCCCACTTTTTGGCTATCGAAGACGCCCTTATTTCATTCTAGCAGGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BT1

Protein Analysis

126

Amino Acids

14.52

Weight (kDa)

5.82

Isoelectric Point (pI)

56.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 60 - 125 1.2e-21 BT1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 362
AccB7I CCANNNNNTGG 2 cut(s) 288, 338
AciI CCGC 1 cut(s) 36
AcyI GRCGYC 1 cut(s) 352
AfaI GTAC 1 cut(s) 200
AfiI CCNNNNNNNGG 4 cut(s) 38, 288, 308, 338
AgsI TTSAA 1 cut(s) 236
AluBI AGCT 1 cut(s) 194
AluI AGCT 1 cut(s) 194
Alw26I GTCTC 1 cut(s) 317
ApeKI GCWGC 1 cut(s) 244
Asp700I GAANNNNTTC 1 cut(s) 277
AspS9I GGNCC 1 cut(s) 89
AsuC2I CCSGG 1 cut(s) 203
AsuHPI GGTGA 1 cut(s) 310
AvaII GGWCC 1 cut(s) 89
BaeGI GKGCMC 1 cut(s) 212
BbsI GAAGAC 1 cut(s) 355
BbvI GCAGC 1 cut(s) 256
BccI CCATC 1 cut(s) 80
BcnI CCSGG 1 cut(s) 203
BcoDI GTCTC 1 cut(s) 317
BfaI CTAG 1 cut(s) 368
BfuAI ACCTGC 1 cut(s) 362
BisI GCNGC 1 cut(s) 245
BlsI GCNGC 1 cut(s) 246
Bme1390I CCNGG 1 cut(s) 203
Bme18I GGWCC 1 cut(s) 89
BmgT120I GGNCC 1 cut(s) 89
BmrFI CCNGG 1 cut(s) 203
BmsI GCATC 1 cut(s) 105
BpiI GAAGAC 1 cut(s) 355
BpuEI CTTGAG 1 cut(s) 237
BpuMI CCSGG 1 cut(s) 203
BsaHI GRCGYC 1 cut(s) 352
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 1 cut(s) 287
BsaXI ACNNNNNCTCC 2 cut(s) 67, 97
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 288, 308, 338
BseDI CCNNGG 1 cut(s) 287
BseGI GGATG 2 cut(s) 120, 235
BseLI CCNNNNNNNGG 4 cut(s) 38, 288, 308, 338
BseRI GAGGAG 3 cut(s) 26, 88, 305
BseSI GKGCMC 1 cut(s) 212
BseXI GCAGC 1 cut(s) 256
BsgI GTGCAG 1 cut(s) 263
BsiSI CCGG 1 cut(s) 202
BslI CCNNNNNNNGG 4 cut(s) 38, 288, 308, 338
BsmAI GTCTC 1 cut(s) 317
Bso31I GGTCTC 1 cut(s) 317
Bsp1286I GDGCHC 1 cut(s) 212
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 1 cut(s) 36
BspMI ACCTGC 1 cut(s) 362
BspTNI GGTCTC 1 cut(s) 317
BssECI CCNNGG 1 cut(s) 287
BssNI GRCGYC 1 cut(s) 352
BssT1I CCWWGG 1 cut(s) 287
Bst6I CTCTTC 1 cut(s) 65
BstACI GRCGYC 1 cut(s) 352
BstDSI CCRYGG 1 cut(s) 287
BstF5I GGATG 2 cut(s) 120, 235
BstMAI GTCTC 1 cut(s) 317
BstMWI GCNNNNNNNGC 1 cut(s) 298
BstSCI CCNGG 1 cut(s) 201
BstSLI GKGCMC 1 cut(s) 212
BstV1I GCAGC 1 cut(s) 256
BstV2I GAAGAC 1 cut(s) 355
BstXI CCANNNNNNTGG 1 cut(s) 105
BtgI CCRYGG 1 cut(s) 287
BtsCI GGATG 2 cut(s) 120, 235
BveI ACCTGC 1 cut(s) 362
Cfr13I GGNCC 1 cut(s) 89
CseI GACGC 1 cut(s) 360
Csp6I GTAC 1 cut(s) 199
CviAII CATG 2 cut(s) 223, 288
CviJI RGCY 6 cut(s) 194, 247, 257, 292, 301, 342
CviKI_1 RGCY 6 cut(s) 194, 247, 257, 292, 301, 342
CviQI GTAC 1 cut(s) 199
Eam1104I CTCTTC 1 cut(s) 65
EarI CTCTTC 1 cut(s) 65
Eco130I CCWWGG 1 cut(s) 287
Eco31I GGTCTC 1 cut(s) 317
Eco47I GGWCC 1 cut(s) 89
EcoT14I CCWWGG 1 cut(s) 287
ErhI CCWWGG 1 cut(s) 287
FaeI CATG 2 cut(s) 226, 291
FaiI YATR 4 cut(s) 168, 197, 224, 289
FalI AAGNNNNNCTT 2 cut(s) 340, 372
FatI CATG 2 cut(s) 222, 287
Fnu4HI GCNGC 1 cut(s) 245
FokI GGATG 2 cut(s) 127, 242
Fsp4HI GCNGC 1 cut(s) 245
FspBI CTAG 1 cut(s) 368
GluI GCNGC 1 cut(s) 245
HapII CCGG 1 cut(s) 202
HgaI GACGC 1 cut(s) 360
Hin1I GRCGYC 1 cut(s) 352
Hin1II CATG 2 cut(s) 226, 291
HpaII CCGG 1 cut(s) 202
HphI GGTGA 1 cut(s) 310
Hpy188III TCNNGA 1 cut(s) 112
HpyAV CCTTC 2 cut(s) 220, 258
HpyCH4V TGCA 3 cut(s) 53, 133, 244
HpyF10VI GCNNNNNNNGC 1 cut(s) 298
Hsp92I GRCGYC 1 cut(s) 352
Hsp92II CATG 2 cut(s) 226, 291
LmnI GCTCC 1 cut(s) 191
LpnPI CCDG 5 cut(s) 46, 97, 215, 292, 357
Lsp1109I GCAGC 1 cut(s) 256
LweI GCATC 1 cut(s) 105
MaeI CTAG 1 cut(s) 368
MboII GAAGA 5 cut(s) 29, 32, 68, 82, 360
MhlI GDGCHC 1 cut(s) 212
MluCI AATT 4 cut(s) 42, 260, 273, 376
MnlI CCTC 6 cut(s) 4, 7, 66, 69, 312, 326
MroXI GAANNNNTTC 1 cut(s) 277
MseI TTAA 1 cut(s) 379
MspI CCGG 1 cut(s) 202
MspR9I CCNGG 1 cut(s) 203
MwoI GCNNNNNNNGC 1 cut(s) 298
NciI CCSGG 1 cut(s) 203
NcoI CCATGG 1 cut(s) 287
NlaIII CATG 2 cut(s) 226, 291
PdmI GAANNNNTTC 1 cut(s) 277
PflMI CCANNNNNTGG 2 cut(s) 288, 338
PkrI GCNGC 1 cut(s) 246
PspPI GGNCC 1 cut(s) 89
RsaI GTAC 1 cut(s) 200
RsaNI GTAC 1 cut(s) 199
SaqAI TTAA 1 cut(s) 379
SatI GCNGC 1 cut(s) 245
Sau96I GGNCC 1 cut(s) 89
ScrFI CCNGG 1 cut(s) 203
SduI GDGCHC 1 cut(s) 212
SetI ASST 4 cut(s) 80, 196, 243, 376
SfaNI GCATC 1 cut(s) 105
SinI GGWCC 1 cut(s) 89
SmlI CTYRAG 1 cut(s) 252
SmoI CTYRAG 1 cut(s) 252
Sse9I AATT 4 cut(s) 42, 260, 273, 376
SsiI CCGC 1 cut(s) 36
SspI AATATT 1 cut(s) 218
SspMI CTAG 1 cut(s) 368
StyD4I CCNGG 1 cut(s) 201
StyI CCWWGG 1 cut(s) 287
TaqI TCGA 1 cut(s) 346
TasI AATT 4 cut(s) 42, 260, 273, 376
Tru1I TTAA 1 cut(s) 379
Tru9I TTAA 1 cut(s) 379
TseI GCWGC 1 cut(s) 244
TspDTI ATGAA 3 cut(s) 78, 239, 352
Van91I CCANNNNNTGG 2 cut(s) 288, 338
VpaK11BI GGWCC 1 cut(s) 89
XmnI GAANNNNTTC 1 cut(s) 277
XspI CTAG 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.