Rh6AG398200

Folate-Biopterin Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0008245
Physical Location & Seq
Forward (+)
59647969 .. 59649312
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG398200.1

Sequence Viewer

Length: 1113 bp
ATGCTTGTGTTATCATTCCATGAAAAGCTGCACATTGCATTTGCCATCTTGGCATTAACAGTTGGAAGTGCTGGAGTAGCTGTAGCCGATGTCACCATAGATGCTTGTGTGGCACAGAACAGTATTAACCATCATTCACTTGCAGCCGATATGCAAAGCCTGTGTGCCTTGAGTTCCTCCATCGGGGCACTTTTGGGATTCTCTGTCAGTGGTATATTTGTTCATCTTATAGGCCCAAAGGGGGTATATGGCTTGTTGGCAATCCCATCTGGACTTGTATTTTTACTTGGAACTCTGCTTAAGGAACCTCATTCACCCAATTTCGCTTACACGCAGGTCAATCAGAAGTTTATTGATGCTGGTAAGTCTATGTGGACCACATTGAAATGCCCTGACGTATGGAGACCATGCTTATACATGTACTTATCACTTGCATTAAGCTTGAACATCCTTGATGGAATGTTCTTCTGGTATACAGACTCAAAGGGGGGTCCATCTTTCTCTCAGGAGAACGTGGGATTTATATTCTCTATAGGCTCAGTTGGTTCCATTTTGGGGGCAGTACTCTATCAGTATGTCCTAAAGGATCATCCTTTCCGGGACTTGCTCTTCTGGACTCAGTTGGTTTATGGTTTATCAGGAATGCTAGATTTGATGCTGGTCTTGCGGTTAAATTTGAGATTTGGCATGCCTGATTACTTCTTTGTTGTGATTGATGAAAGTGTATCGCAAATGACTGGAAGGCTCAAATGGATGCCTCTTCTGGTGCTTAGCTCAAAGCTTTGCCCCACAGGAATTGAAGGAACTTTTTTTGCGTTGCTCATGTCAATTGACAATGTTGGACTTCTGTCGGCTACTTGGGGAGGAGGCTTCCTGCTGCATGTATTGAAGGTTACACGGACACAATTCGATAATCTTTGGCTTGCAATTCTGATTAGGAATGTGTTGAGATTAACTCCACTATGTCTGCTATTTTTGGTACCTAGAGTTGATCCCAATTCTTCCATTCTTCCAACTGAAATCTTGAGTACGAAAGACGATATCGAATTTGATACTCCAGAAGCTGAGAACATTGAATTGGTTTCCCTTGTAAGCAGAGTTGATGGCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BT1

Protein Analysis

370

Amino Acids

40.65

Weight (kDa)

5.72

Isoelectric Point (pI)

33.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 6 - 331 2e-90 BT1 family
MFS_1 PF07690 16 - 282 3.3e-09 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 325
Acc65I GGTACC 1 cut(s) 979
AccB1I GGYRCC 1 cut(s) 979
AccI GTMKAC 1 cut(s) 473
AciI CCGC 1 cut(s) 667
AclWI GGATC 2 cut(s) 594, 986
AcsI RAATTY 2 cut(s) 673, 1046
AfaI GTAC 4 cut(s) 422, 564, 981, 1030
AfiI CCNNNNNNNGG 3 cut(s) 183, 241, 555
AflII CTTAAG 1 cut(s) 299
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 5 cut(s) 385, 445, 800, 889, 1076
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AluBI AGCT 6 cut(s) 28, 80, 441, 774, 781, 1064
AluI AGCT 6 cut(s) 28, 80, 441, 774, 781, 1064
Alw26I GTCTC 1 cut(s) 397
AlwI GGATC 2 cut(s) 594, 986
AlwNI CAGNNNCTG 1 cut(s) 1064
AoxI GGCC 1 cut(s) 232
ApeKI GCWGC 3 cut(s) 28, 143, 877
ApoI RAATTY 2 cut(s) 673, 1046
Asp718I GGTACC 1 cut(s) 979
AspS9I GGNCC 3 cut(s) 233, 375, 491
AsuC2I CCSGG 1 cut(s) 599
AsuHPI GGTGA 2 cut(s) 85, 306
AvaII GGWCC 2 cut(s) 375, 491
BaeGI GKGCMC 1 cut(s) 190
BanI GGYRCC 1 cut(s) 979
BbvI GCAGC 3 cut(s) 15, 155, 864
BccI CCATC 7 cut(s) 53, 138, 188, 274, 449, 502, 1097
BcnI CCSGG 1 cut(s) 599
BcoDI GTCTC 1 cut(s) 397
BfaI CTAG 2 cut(s) 647, 984
BfmI CTRYAG 2 cut(s) 81, 531
BfrI CTTAAG 1 cut(s) 299
BfuAI ACCTGC 1 cut(s) 325
BglI GCCNNNNNGGC 1 cut(s) 50
BisI GCNGC 3 cut(s) 29, 144, 878
BlpI GCTNAGC 1 cut(s) 770
BlsI GCNGC 3 cut(s) 30, 145, 879
BmcAI AGTACT 1 cut(s) 564
Bme1390I CCNGG 1 cut(s) 599
Bme18I GGWCC 2 cut(s) 375, 491
BmgT120I GGNCC 3 cut(s) 233, 375, 491
BmiI GGNNCC 4 cut(s) 306, 492, 547, 981
BmrFI CCNGG 1 cut(s) 599
BmsI GCATC 4 cut(s) 91, 346, 645, 744
BoxI GACNNNNGTC 1 cut(s) 847
BplI GAGNNNNNCTC 2 cut(s) 940, 972
BpmI CTGGAG 2 cut(s) 93, 1041
Bpu1102I GCTNAGC 1 cut(s) 770
BpuEI CTTGAG 2 cut(s) 190, 1045
BpuMI CCSGG 1 cut(s) 599
BsaI GGTCTC 1 cut(s) 397
BsaXI ACNNNNNCTCC 2 cut(s) 66, 96
Bsc4I CCNNNNNNNGG 3 cut(s) 183, 241, 555
Bse1I ACTGG 1 cut(s) 742
Bse3DI GCAATG 1 cut(s) 33
BseGI GGATG 3 cut(s) 447, 589, 759
BseLI CCNNNNNNNGG 3 cut(s) 183, 241, 555
BseMI GCAATG 1 cut(s) 33
BseMII CTCAG 4 cut(s) 518, 552, 632, 1056
BseNI ACTGG 1 cut(s) 742
BseRI GAGGAG 1 cut(s) 879
BseSI GKGCMC 1 cut(s) 190
BseXI GCAGC 3 cut(s) 15, 155, 864
BsgI GTGCAG 1 cut(s) 14
BshFI GGCC 1 cut(s) 234
BshNI GGYRCC 1 cut(s) 979
BsiSI CCGG 1 cut(s) 598
BslFI GGGAC 1 cut(s) 614
BslI CCNNNNNNNGG 3 cut(s) 183, 241, 555
BsmAI GTCTC 1 cut(s) 397
BsmFI GGGAC 1 cut(s) 614
BsmI GAATGC 1 cut(s) 648
BsnI GGCC 1 cut(s) 234
Bso31I GGTCTC 1 cut(s) 397
Bsp1286I GDGCHC 1 cut(s) 190
Bsp143I GATC 2 cut(s) 586, 991
Bsp1720I GCTNAGC 1 cut(s) 770
BspACI CCGC 1 cut(s) 667
BspANI GGCC 1 cut(s) 234
BspCNI CTCAG 4 cut(s) 517, 551, 631, 1057
BspLI GGNNCC 4 cut(s) 306, 492, 547, 981
BspMI ACCTGC 1 cut(s) 325
BspPI GGATC 2 cut(s) 594, 986
BspQI GCTCTTC 1 cut(s) 614
BspT107I GGYRCC 1 cut(s) 979
BspTI CTTAAG 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 33
BsrI ACTGG 1 cut(s) 742
BssMI GATC 2 cut(s) 586, 991
BssNAI GTATAC 1 cut(s) 474
Bst1107I GTATAC 1 cut(s) 474
Bst4CI ACNGT 2 cut(s) 61, 122
Bst6I CTCTTC 2 cut(s) 614, 765
BstAFI CTTAAG 1 cut(s) 299
BstC8I GCNNGC 2 cut(s) 689, 924
BstDEI CTNAG 5 cut(s) 504, 538, 618, 770, 1065
BstF5I GGATG 3 cut(s) 447, 589, 759
BstKTI GATC 2 cut(s) 589, 994
BstMAI GTCTC 1 cut(s) 397
BstMBI GATC 2 cut(s) 586, 991
BstMWI GCNNNNNNNGC 4 cut(s) 50, 77, 110, 664
BstNSI RCATGY 3 cut(s) 421, 691, 884
BstPAI GACNNNNGTC 1 cut(s) 847
BstSCI CCNGG 1 cut(s) 597
BstSFI CTRYAG 2 cut(s) 81, 531
BstSLI GKGCMC 1 cut(s) 190
BstV1I GCAGC 3 cut(s) 15, 155, 864
BstZ17I GTATAC 1 cut(s) 474
BsuRI GGCC 1 cut(s) 234
BtsCI GGATG 3 cut(s) 447, 589, 759
BtsIMutI CAGTG 1 cut(s) 214
BveI ACCTGC 1 cut(s) 325
Cac8I GCNNGC 2 cut(s) 689, 924
CaiI CAGNNNCTG 1 cut(s) 1064
Cfr13I GGNCC 3 cut(s) 233, 375, 491
Csp6I GTAC 4 cut(s) 421, 563, 980, 1029
CspCI CAANNNNNGTGG 2 cut(s) 778, 813
CviAII CATG 6 cut(s) 20, 408, 418, 688, 823, 881
CviQI GTAC 4 cut(s) 421, 563, 980, 1029
DdeI CTNAG 5 cut(s) 504, 538, 618, 770, 1065
DpnI GATC 2 cut(s) 588, 993
DpnII GATC 2 cut(s) 586, 991
Eam1104I CTCTTC 2 cut(s) 614, 765
EarI CTCTTC 2 cut(s) 614, 765
Eco31I GGTCTC 1 cut(s) 397
Eco32I GATATC 1 cut(s) 1042
Eco47I GGWCC 2 cut(s) 375, 491
EcoRV GATATC 1 cut(s) 1042
FaeI CATG 6 cut(s) 23, 411, 421, 691, 826, 884
FaqI GGGAC 1 cut(s) 614
FatI CATG 6 cut(s) 19, 407, 417, 687, 822, 880
FblI GTMKAC 1 cut(s) 473
Fnu4HI GCNGC 3 cut(s) 29, 144, 878
FokI GGATG 3 cut(s) 434, 576, 766
Fsp4HI GCNGC 3 cut(s) 29, 144, 878
FspBI CTAG 2 cut(s) 647, 984
GluI GCNGC 3 cut(s) 29, 144, 878
GsuI CTGGAG 2 cut(s) 93, 1041
HaeIII GGCC 1 cut(s) 234
HapII CCGG 1 cut(s) 598
Hin1II CATG 6 cut(s) 23, 411, 421, 691, 826, 884
HindIII AAGCTT 2 cut(s) 439, 779
HinfI GANTC 3 cut(s) 198, 479, 616
HpaII CCGG 1 cut(s) 598
HphI GGTGA 2 cut(s) 85, 306
Hpy166II GTNNAC 2 cut(s) 375, 474
Hpy188I TCNGA 2 cut(s) 345, 933
Hpy188III TCNNGA 6 cut(s) 270, 506, 613, 639, 1024, 1058
Hpy8I GTNNAC 2 cut(s) 375, 474
HpyAV CCTTC 3 cut(s) 735, 794, 883
HpyCH4III ACNGT 2 cut(s) 61, 122
HpyCH4IV ACGT 2 cut(s) 396, 513
HpyCH4V TGCA 7 cut(s) 31, 38, 143, 154, 434, 880, 926
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 77, 110, 664
HpyF3I CTNAG 5 cut(s) 504, 538, 618, 770, 1065
HpySE526I ACGT 2 cut(s) 396, 513
Hsp92II CATG 6 cut(s) 23, 411, 421, 691, 826, 884
KpnI GGTACC 1 cut(s) 983
Kzo9I GATC 2 cut(s) 586, 991
LguI GCTCTTC 1 cut(s) 614
Lsp1109I GCAGC 3 cut(s) 15, 155, 864
LweI GCATC 4 cut(s) 91, 346, 645, 744
MaeI CTAG 2 cut(s) 647, 984
MaeII ACGT 2 cut(s) 396, 513
MaeIII GTNAC 2 cut(s) 91, 892
MalI GATC 2 cut(s) 588, 993
MboI GATC 2 cut(s) 586, 991
MboII GAAGA 5 cut(s) 457, 601, 752, 993, 1001
MfeI CAATTG 1 cut(s) 828
MhlI GDGCHC 1 cut(s) 190
MluCI AATT 9 cut(s) 319, 673, 795, 828, 905, 927, 997, 1046, 1076
MlyI GAGTC 2 cut(s) 473, 610
MmeI TCCRAC 3 cut(s) 43, 820, 1037
MnlI CCTC 5 cut(s) 187, 318, 768, 857, 860
MseI TTAA 6 cut(s) 56, 126, 300, 437, 671, 953
MslI CAYNNNNRTG 1 cut(s) 385
MspCI CTTAAG 1 cut(s) 299
MspI CCGG 1 cut(s) 598
MspR9I CCNGG 1 cut(s) 599
MunI CAATTG 1 cut(s) 828
Mva1269I GAATGC 1 cut(s) 648
MwoI GCNNNNNNNGC 4 cut(s) 50, 77, 110, 664
NciI CCSGG 1 cut(s) 599
NdeII GATC 2 cut(s) 586, 991
NlaIII CATG 6 cut(s) 23, 411, 421, 691, 826, 884
NlaIV GGNNCC 4 cut(s) 306, 492, 547, 981
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 3 cut(s) 421, 691, 884
PaeI GCATGC 1 cut(s) 691
PciI ACATGT 1 cut(s) 417
PciSI GCTCTTC 1 cut(s) 614
PctI GAATGC 1 cut(s) 648
PfeI GAWTC 1 cut(s) 198
PfoI TCCNGGA 1 cut(s) 597
PkrI GCNGC 3 cut(s) 30, 145, 879
PleI GAGTC 2 cut(s) 473, 610
PpsI GAGTC 2 cut(s) 473, 610
PscI ACATGT 1 cut(s) 417
PshAI GACNNNNGTC 1 cut(s) 847
PspN4I GGNNCC 4 cut(s) 306, 492, 547, 981
PspPI GGNCC 3 cut(s) 233, 375, 491
PstNI CAGNNNCTG 1 cut(s) 1064
RsaI GTAC 4 cut(s) 422, 564, 981, 1030
RsaNI GTAC 4 cut(s) 421, 563, 980, 1029
RseI CAYNNNNRTG 1 cut(s) 385
SapI GCTCTTC 1 cut(s) 614
SaqAI TTAA 6 cut(s) 56, 126, 300, 437, 671, 953
SatI GCNGC 3 cut(s) 29, 144, 878
Sau3AI GATC 2 cut(s) 586, 991
Sau96I GGNCC 3 cut(s) 233, 375, 491
ScaI AGTACT 1 cut(s) 564
SchI GAGTC 2 cut(s) 473, 610
ScrFI CCNGG 1 cut(s) 599
SduI GDGCHC 1 cut(s) 190
SfaNI GCATC 4 cut(s) 91, 346, 645, 744
SfcI CTRYAG 2 cut(s) 81, 531
SinI GGWCC 2 cut(s) 375, 491
SmiMI CAYNNNNRTG 1 cut(s) 385
SmlI CTYRAG 3 cut(s) 169, 299, 1024
SmoI CTYRAG 3 cut(s) 169, 299, 1024
SphI GCATGC 1 cut(s) 691
Sse9I AATT 9 cut(s) 319, 673, 795, 828, 905, 927, 997, 1046, 1076
SsiI CCGC 1 cut(s) 667
SspMI CTAG 2 cut(s) 647, 984
StyD4I CCNGG 1 cut(s) 597
TaaI ACNGT 2 cut(s) 61, 122
TaiI ACGT 2 cut(s) 399, 516
TaqI TCGA 2 cut(s) 909, 1044
TasI AATT 9 cut(s) 319, 673, 795, 828, 905, 927, 997, 1046, 1076
TatI WGTACW 2 cut(s) 420, 562
TfiI GAWTC 1 cut(s) 198
Tru1I TTAA 6 cut(s) 56, 126, 300, 437, 671, 953
Tru9I TTAA 6 cut(s) 56, 126, 300, 437, 671, 953
TscAI CASTG 1 cut(s) 214
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 3 cut(s) 28, 143, 877
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 3 cut(s) 36, 212, 732
TspGWI ACGGA 1 cut(s) 913
TspRI CASTG 1 cut(s) 214
Vha464I CTTAAG 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 375, 491
XapI RAATTY 2 cut(s) 673, 1046
XceI RCATGY 3 cut(s) 421, 691, 884
XmiI GTMKAC 1 cut(s) 473
XspI CTAG 2 cut(s) 647, 984
ZrmI AGTACT 1 cut(s) 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.