pycom08g04420

Folate-Biopterin Transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
3392706 .. 3394825
2120 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04420.1

Sequence Viewer

Length: 1497 bp
ATGGTGGAGGAAGAGGAGGAGGTTCTGAATCCCTCCGGGGATATTGCAGAGGAAAAAGAGCCGGAAAAAGGGTGTTGTGGAGCTCTCTGCACTCCAATCCAATGGTTCAGAATGCTATGCGTGGAACTGCATTGGAGTTTTGTATTGGGGGTGGTGGTCGTTTATGGAGTAAGTCAAGGACTCGGCGGAGCTCTTTATCGCGTCGGCACGGAGTATTACATGAAGGATGTGCAGAAGGTGCAGCCTTCTGAAGCTCAATTTTATCAGGGAATCACCAATATTCCTTGGCTTGTCAAGCCTCTCTGGGGCCTCCTCACTGATATTCTTCCCATTTTCGGGTATCGAAGACGGCCTTATTTCATTATAGCAGGTTCTGTTGGTGTGATGGCAATGCTCGTTTTATCGTTCCATGCAAAGTTGCACATTGCACTTGCCCTCTTGGCATTAACAACCGGAAGTGGCGGAGTGGCTGTCGCAGATGTGACCATCGATGCGTGTGTGGCACAGAACAGTATTAATCATCCTAGTCTCGCAGCCGATATCCAGAGCCTGTGTGCCCTGAGTTCCTCCATTGGAGCACTACTGGGGTTCTCTGTTAGCGGCATCTTCGTTCATCTTCTAGGCCCTAAGGGGGTGTACGGCTTGTTGGCAATCCCATTTGGACTTGTGTTCTTAATCGGAACTTTGATCAAGGAAGCTCATTCACCAAACTTCGCTTACACGCAGGTGAATCAGAAGTTTGTCGATGCTGGCAAATCCATGTGGACAACATTGAAATGCCCTGATGTATGGAGACCATGCGTATACATGTACTTTTCCCTTGCATTGAGCTTGAATATCCTCGACGGAATGTTCTTCTGGTATACAGACTCGAAAGATGGTCCACATTTCTCTCAGGAGAATGTTGGATACATATTCTCAATAGGTTCAGTTGGTTCCCTTTTGGGGGCAGTACTCTATCAAAATGTTCTAAAGGATCATCCTTTCCGGGACTTGCTCTTCTGGACTCAATTGATTTACGGGGTGTCAGGAACATTAGACTTGATGCTCGTTTTGCGATTGAATCTGAAGTTTGGCATACCCGATTATTTCTTCGTTGTGATTGATGAAAGTGTATCTCAAATGACCGGAAGGCTCAAGTGGATGCCTCTTCTTGTACTCAGCTCAAAGCTTTGTCCCCCTGGAATCGAAGGAACTTTCTTCGCTCTGCTTATGTCGATTGATAACGTTGGACTTGTCTCGGCAACATGGGGAGGAGGCATTTTACTGCACGTATTGAAGGTTACACGGATGCAATTTGATAATCTCTGGCTAGCCATTCTGATTAGGAACTTTTTGAGATTAGCTCCTCTTTGTCTGCTGTTTTTGGTGCCTAGAGCTGATCCGAAATCTTCGATTCTTCCGACCGAAATCGCAAACACGATAGAGGATATCGAAACTCTGGAAACAAAGAACGTTGAGTTAGTCTCCCTTGTAAACAGAGCAGACCATCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

499

Amino Acids

54.97

Weight (kDa)

5.71

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 59 - 461 9.7e-120 BT1 family
MFS_1 PF07690 80 - 413 3.7e-09 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 715
Acc36I ACCTGC 2 cut(s) 359, 715
AccB1I GGYRCC 1 cut(s) 1369
AccI GTMKAC 2 cut(s) 804, 863
AccII CGCG 1 cut(s) 201
AciI CCGC 3 cut(s) 186, 462, 600
AclI AACGTT 2 cut(s) 1227, 1455
AclWI GGATC 2 cut(s) 984, 1376
AcuI CTGAAG 2 cut(s) 270, 1088
AfaI GTAC 4 cut(s) 638, 812, 954, 1158
AfiI CCNNNNNNNGG 7 cut(s) 68, 305, 335, 336, 631, 945, 946
AflIII ACRYGT 1 cut(s) 807
AgsI TTSAA 4 cut(s) 775, 835, 1063, 1279
AjnI CCWGG 1 cut(s) 1180
AleI CACNNNNGTG 1 cut(s) 725
AluBI AGCT 9 cut(s) 83, 191, 254, 698, 831, 1164, 1171, 1346, 1379
AluI AGCT 9 cut(s) 83, 191, 254, 698, 831, 1164, 1171, 1346, 1379
Alw21I GWGCWC 3 cut(s) 85, 193, 580
Alw26I GTCTC 4 cut(s) 533, 787, 1243, 1471
AlwI GGATC 2 cut(s) 984, 1376
AlwNI CAGNNNCTG 2 cut(s) 374, 550
AoxI GGCC 3 cut(s) 307, 350, 622
ApeKI GCWGC 2 cut(s) 241, 533
AseI ATTAAT 1 cut(s) 516
AspS9I GGNCC 3 cut(s) 307, 623, 881
AsuC2I CCSGG 2 cut(s) 37, 989
AsuHPI GGTGA 3 cut(s) 265, 696, 739
AsuNHI GCTAGC 1 cut(s) 1312
AvaII GGWCC 1 cut(s) 881
AxyI CCTNAGG 1 cut(s) 627
BaeGI GKGCMC 1 cut(s) 559
BanI GGYRCC 1 cut(s) 1369
BanII GRGCYC 2 cut(s) 85, 193
BbsI GAAGAC 1 cut(s) 352
Bbv12I GWGCWC 3 cut(s) 85, 193, 580
BbvI GCAGC 2 cut(s) 253, 545
BccI CCATC 3 cut(s) 379, 494, 872
BceAI ACGGC 2 cut(s) 365, 655
BciT130I CCWGG 1 cut(s) 1182
BciVI GTATCC 1 cut(s) 902
BclI TGATCA 1 cut(s) 687
BcnI CCSGG 2 cut(s) 37, 989
BcoDI GTCTC 4 cut(s) 533, 787, 1243, 1471
BfaI CTAG 4 cut(s) 525, 620, 1313, 1374
BfuAI ACCTGC 2 cut(s) 359, 715
BfuI GTATCC 1 cut(s) 902
BglI GCCNNNNNGGC 1 cut(s) 440
BisI GCNGC 3 cut(s) 242, 534, 601
BlsI GCNGC 3 cut(s) 243, 535, 602
BmcAI AGTACT 1 cut(s) 954
Bme1390I CCNGG 3 cut(s) 37, 989, 1182
Bme18I GGWCC 1 cut(s) 881
BmgT120I GGNCC 3 cut(s) 307, 623, 881
BmiI GGNNCC 3 cut(s) 308, 937, 1371
BmrFI CCNGG 3 cut(s) 37, 989, 1182
BmrI ACTGGG 1 cut(s) 593
BmsI GCATC 6 cut(s) 481, 612, 736, 1035, 1134, 1281
BmtI GCTAGC 1 cut(s) 1316
BmuI ACTGGG 1 cut(s) 593
BpiI GAAGAC 1 cut(s) 352
BplI GAGNNNNNCTC 4 cut(s) 1330, 1362, 1451, 1483
BpuEI CTTGAG 1 cut(s) 1121
BpuMI CCSGG 2 cut(s) 37, 989
Bsa29I ATCGAT 2 cut(s) 489, 1492
BsaAI YACGTR 1 cut(s) 1273
BsaI GGTCTC 1 cut(s) 787
BsaJI CCNNGG 3 cut(s) 36, 284, 1180
BsaWI WCCGGW 2 cut(s) 452, 1127
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 7 cut(s) 68, 305, 335, 336, 631, 945, 946
Bse1I ACTGG 1 cut(s) 588
Bse21I CCTNAGG 1 cut(s) 627
Bse3DI GCAATG 2 cut(s) 396, 423
BseBI CCWGG 1 cut(s) 1182
BseCI ATCGAT 2 cut(s) 489, 1492
BseDI CCNNGG 3 cut(s) 36, 284, 1180
BseGI GGATG 5 cut(s) 232, 520, 979, 1149, 1296
BseLI CCNNNNNNNGG 7 cut(s) 68, 305, 335, 336, 631, 945, 946
BseMI GCAATG 2 cut(s) 396, 423
BseMII CTCAG 3 cut(s) 551, 908, 1174
BseNI ACTGG 1 cut(s) 588
BseRI GAGGAG 5 cut(s) 29, 32, 302, 1269, 1338
BseSI GKGCMC 1 cut(s) 559
BseXI GCAGC 2 cut(s) 253, 545
BsgI GTGCAG 4 cut(s) 73, 251, 260, 1253
Bsh1236I CGCG 1 cut(s) 201
Bsh1285I CGRYCG 1 cut(s) 1407
BshFI GGCC 3 cut(s) 309, 352, 624
BshNI GGYRCC 1 cut(s) 1369
BshVI ATCGAT 2 cut(s) 489, 1492
BsiEI CGRYCG 1 cut(s) 1407
BsiHKAI GWGCWC 3 cut(s) 85, 193, 580
BsiSI CCGG 5 cut(s) 36, 62, 453, 988, 1128
BslFI GGGAC 2 cut(s) 1004, 1161
BslI CCNNNNNNNGG 7 cut(s) 68, 305, 335, 336, 631, 945, 946
BsmAI GTCTC 4 cut(s) 533, 787, 1243, 1471
BsmFI GGGAC 2 cut(s) 1004, 1161
BsmI GAATGC 1 cut(s) 117
BsnI GGCC 3 cut(s) 309, 352, 624
Bso31I GGTCTC 1 cut(s) 787
Bsp1286I GDGCHC 4 cut(s) 85, 193, 559, 580
Bsp143I GATC 3 cut(s) 687, 976, 1381
BspACI CCGC 3 cut(s) 186, 462, 600
BspANI GGCC 3 cut(s) 309, 352, 624
BspCNI CTCAG 3 cut(s) 552, 907, 1173
BspDI ATCGAT 2 cut(s) 489, 1492
BspFNI CGCG 1 cut(s) 201
BspLI GGNNCC 3 cut(s) 308, 937, 1371
BspMI ACCTGC 2 cut(s) 359, 715
BspOI GCTAGC 1 cut(s) 1316
BspPI GGATC 2 cut(s) 984, 1376
BspQI GCTCTTC 1 cut(s) 1004
BspT107I GGYRCC 1 cut(s) 1369
BspTNI GGTCTC 1 cut(s) 787
BsrDI GCAATG 2 cut(s) 396, 423
BsrI ACTGG 1 cut(s) 588
BssECI CCNNGG 3 cut(s) 36, 284, 1180
BssMI GATC 3 cut(s) 687, 976, 1381
BssNAI GTATAC 2 cut(s) 805, 864
BssT1I CCWWGG 1 cut(s) 284
Bst1107I GTATAC 2 cut(s) 805, 864
Bst2UI CCWGG 1 cut(s) 1182
Bst4CI ACNGT 1 cut(s) 512
Bst6I CTCTTC 3 cut(s) 6, 1004, 1155
BstAPI GCANNNNNTGC 1 cut(s) 238
BstBAI YACGTR 1 cut(s) 1273
BstC8I GCNNGC 2 cut(s) 751, 1314
BstDEI CTNAG 4 cut(s) 560, 627, 894, 1160
BstF5I GGATG 5 cut(s) 232, 520, 979, 1149, 1296
BstFNI CGCG 1 cut(s) 201
BstKTI GATC 3 cut(s) 690, 979, 1384
BstMAI GTCTC 4 cut(s) 533, 787, 1243, 1471
BstMBI GATC 3 cut(s) 687, 976, 1381
BstMCI CGRYCG 1 cut(s) 1407
BstMWI GCNNNNNNNGC 5 cut(s) 238, 295, 440, 500, 1054
BstNI CCWGG 1 cut(s) 1182
BstNSI RCATGY 1 cut(s) 811
BstSCI CCNGG 3 cut(s) 35, 987, 1180
BstSLI GKGCMC 1 cut(s) 559
BstUI CGCG 1 cut(s) 201
BstV1I GCAGC 2 cut(s) 253, 545
BstV2I GAAGAC 1 cut(s) 352
BstXI CCANNNNNNTGG 1 cut(s) 102
BstZ17I GTATAC 2 cut(s) 805, 864
Bsu15I ATCGAT 2 cut(s) 489, 1492
Bsu36I CCTNAGG 1 cut(s) 627
BsuI GTATCC 1 cut(s) 902
BsuRI GGCC 3 cut(s) 309, 352, 624
BsuTUI ATCGAT 2 cut(s) 489, 1492
BtsCI GGATG 5 cut(s) 232, 520, 979, 1149, 1296
BtsIMutI CAGTG 1 cut(s) 315
BveI ACCTGC 2 cut(s) 359, 715
Cac8I GCNNGC 2 cut(s) 751, 1314
CaiI CAGNNNCTG 2 cut(s) 374, 550
Cfr13I GGNCC 3 cut(s) 307, 623, 881
ClaI ATCGAT 2 cut(s) 489, 1492
CseI GACGC 1 cut(s) 190
Csp6I GTAC 4 cut(s) 637, 811, 953, 1157
CviAII CATG 6 cut(s) 220, 410, 760, 798, 808, 1248
CviQI GTAC 4 cut(s) 637, 811, 953, 1157
DdeI CTNAG 4 cut(s) 560, 627, 894, 1160
DpnI GATC 3 cut(s) 689, 978, 1383
DpnII GATC 3 cut(s) 687, 976, 1381
Eam1104I CTCTTC 3 cut(s) 6, 1004, 1155
EarI CTCTTC 3 cut(s) 6, 1004, 1155
EciI GGCGGA 2 cut(s) 201, 477
Ecl136II GAGCTC 2 cut(s) 83, 191
Eco130I CCWWGG 1 cut(s) 284
Eco24I GRGCYC 2 cut(s) 85, 193
Eco31I GGTCTC 1 cut(s) 787
Eco32I GATATC 2 cut(s) 541, 1432
Eco47I GGWCC 1 cut(s) 881
Eco53kI GAGCTC 2 cut(s) 83, 191
Eco57I CTGAAG 2 cut(s) 270, 1088
Eco81I CCTNAGG 1 cut(s) 627
EcoICRI GAGCTC 2 cut(s) 83, 191
EcoO109I RGGNCCY 2 cut(s) 307, 623
EcoRII CCWGG 1 cut(s) 1180
EcoRV GATATC 2 cut(s) 541, 1432
EcoT14I CCWWGG 1 cut(s) 284
EcoT38I GRGCYC 2 cut(s) 85, 193
ErhI CCWWGG 1 cut(s) 284
FaeI CATG 6 cut(s) 223, 413, 763, 801, 811, 1251
FalI AAGNNNNNCTT 2 cut(s) 337, 369
FaqI GGGAC 2 cut(s) 1004, 1161
FatI CATG 6 cut(s) 219, 409, 759, 797, 807, 1247
FbaI TGATCA 1 cut(s) 687
FblI GTMKAC 2 cut(s) 804, 863
Fnu4HI GCNGC 3 cut(s) 242, 534, 601
FokI GGATG 5 cut(s) 239, 507, 966, 1156, 1303
FriOI GRGCYC 2 cut(s) 85, 193
Fsp4HI GCNGC 3 cut(s) 242, 534, 601
FspBI CTAG 4 cut(s) 525, 620, 1313, 1374
GluI GCNGC 3 cut(s) 242, 534, 601
HaeIII GGCC 3 cut(s) 309, 352, 624
HapII CCGG 5 cut(s) 36, 62, 453, 988, 1128
HgaI GACGC 1 cut(s) 190
Hin1II CATG 6 cut(s) 223, 413, 763, 801, 811, 1251
HindIII AAGCTT 1 cut(s) 1169
HinfI GANTC 9 cut(s) 28, 180, 270, 730, 869, 1006, 1063, 1185, 1396
HpaII CCGG 5 cut(s) 36, 62, 453, 988, 1128
HphI GGTGA 3 cut(s) 265, 696, 739
Hpy166II GTNNAC 6 cut(s) 637, 765, 805, 864, 884, 1477
Hpy188I TCNGA 9 cut(s) 27, 110, 250, 680, 735, 1068, 1323, 1386, 1404
Hpy188III TCNNGA 5 cut(s) 544, 896, 1003, 1029, 1442
Hpy8I GTNNAC 6 cut(s) 637, 765, 805, 864, 884, 1477
Hpy99I CGWCG 2 cut(s) 206, 848
HpyAV CCTTC 6 cut(s) 217, 229, 255, 1125, 1184, 1273
HpyCH4III ACNGT 1 cut(s) 512
HpyCH4IV ACGT 3 cut(s) 1227, 1272, 1455
HpyF10VI GCNNNNNNNGC 5 cut(s) 238, 295, 440, 500, 1054
HpyF3I CTNAG 4 cut(s) 560, 627, 894, 1160
HpySE526I ACGT 3 cut(s) 1227, 1272, 1455
Hsp92II CATG 6 cut(s) 223, 413, 763, 801, 811, 1251
Ksp22I TGATCA 1 cut(s) 687
Kzo9I GATC 3 cut(s) 687, 976, 1381
LguI GCTCTTC 1 cut(s) 1004
LmnI GCTCC 4 cut(s) 80, 188, 575, 1351
Lsp1109I GCAGC 2 cut(s) 253, 545
LweI GCATC 6 cut(s) 481, 612, 736, 1035, 1134, 1281
MaeI CTAG 4 cut(s) 525, 620, 1313, 1374
MaeII ACGT 3 cut(s) 1227, 1272, 1455
MaeIII GTNAC 2 cut(s) 481, 1282
MalI GATC 3 cut(s) 689, 978, 1383
MboI GATC 3 cut(s) 687, 976, 1381
MfeI CAATTG 1 cut(s) 1010
MhlI GDGCHC 4 cut(s) 85, 193, 559, 580
MluCI AATT 3 cut(s) 257, 1010, 1295
MlyI GAGTC 3 cut(s) 174, 863, 1000
MmeI TCCRAC 3 cut(s) 886, 1210, 1427
MseI TTAA 3 cut(s) 446, 516, 674
MslI CAYNNNNRTG 2 cut(s) 725, 775
MspI CCGG 5 cut(s) 36, 62, 453, 988, 1128
MspR9I CCNGG 3 cut(s) 37, 989, 1182
MunI CAATTG 1 cut(s) 1010
Mva1269I GAATGC 1 cut(s) 117
MvaI CCWGG 1 cut(s) 1182
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 5 cut(s) 238, 295, 440, 500, 1054
NciI CCSGG 2 cut(s) 37, 989
NdeII GATC 3 cut(s) 687, 976, 1381
NheI GCTAGC 1 cut(s) 1312
NlaIII CATG 6 cut(s) 223, 413, 763, 801, 811, 1251
NlaIV GGNNCC 3 cut(s) 308, 937, 1371
NmeAIII GCCGAG 2 cut(s) 162, 1220
NmuCI GTSAC 1 cut(s) 481
NspI RCATGY 1 cut(s) 811
OliI CACNNNNGTG 1 cut(s) 725
PaqCI CACCTGC 1 cut(s) 715
PciI ACATGT 1 cut(s) 807
PciSI GCTCTTC 1 cut(s) 1004
PcsI WCGNNNNNNNCGW 1 cut(s) 1400
PctI GAATGC 1 cut(s) 117
PfeI GAWTC 6 cut(s) 28, 270, 730, 1063, 1185, 1396
PfoI TCCNGGA 1 cut(s) 987
PkrI GCNGC 3 cut(s) 243, 535, 602
PleI GAGTC 3 cut(s) 174, 863, 1000
PpsI GAGTC 3 cut(s) 174, 863, 1000
Ppu21I YACGTR 1 cut(s) 1273
PscI ACATGT 1 cut(s) 807
PshBI ATTAAT 1 cut(s) 516
Psp124BI GAGCTC 2 cut(s) 85, 193
Psp1406I AACGTT 2 cut(s) 1227, 1455
Psp6I CCWGG 1 cut(s) 1180
PspGI CCWGG 1 cut(s) 1180
PspN4I GGNNCC 3 cut(s) 308, 937, 1371
PspPI GGNCC 3 cut(s) 307, 623, 881
PstNI CAGNNNCTG 2 cut(s) 374, 550
RsaI GTAC 4 cut(s) 638, 812, 954, 1158
RsaNI GTAC 4 cut(s) 637, 811, 953, 1157
RseI CAYNNNNRTG 2 cut(s) 725, 775
SacI GAGCTC 2 cut(s) 85, 193
SapI GCTCTTC 1 cut(s) 1004
SaqAI TTAA 3 cut(s) 446, 516, 674
SatI GCNGC 3 cut(s) 242, 534, 601
Sau3AI GATC 3 cut(s) 687, 976, 1381
Sau96I GGNCC 3 cut(s) 307, 623, 881
ScaI AGTACT 1 cut(s) 954
SchI GAGTC 3 cut(s) 174, 863, 1000
ScrFI CCNGG 3 cut(s) 37, 989, 1182
SduI GDGCHC 4 cut(s) 85, 193, 559, 580
SfaNI GCATC 6 cut(s) 481, 612, 736, 1035, 1134, 1281
SinI GGWCC 1 cut(s) 881
SmiMI CAYNNNNRTG 2 cut(s) 725, 775
SmlI CTYRAG 1 cut(s) 1136
SmoI CTYRAG 1 cut(s) 1136
Sse9I AATT 3 cut(s) 257, 1010, 1295
SsiI CCGC 3 cut(s) 186, 462, 600
SspI AATATT 1 cut(s) 280
SspMI CTAG 4 cut(s) 525, 620, 1313, 1374
SstI GAGCTC 2 cut(s) 85, 193
StyD4I CCNGG 3 cut(s) 35, 987, 1180
StyI CCWWGG 1 cut(s) 284
TaaI ACNGT 1 cut(s) 512
TaiI ACGT 3 cut(s) 1230, 1275, 1458
TaqII GACCGA 1 cut(s) 1421
TasI AATT 3 cut(s) 257, 1010, 1295
TatI WGTACW 3 cut(s) 810, 952, 1156
TauI GCSGC 1 cut(s) 603
TfiI GAWTC 6 cut(s) 28, 270, 730, 1063, 1185, 1396
Tru1I TTAA 3 cut(s) 446, 516, 674
Tru9I TTAA 3 cut(s) 446, 516, 674
TscAI CASTG 1 cut(s) 322
TseFI GTSAC 1 cut(s) 481
TseI GCWGC 2 cut(s) 241, 533
Tsp45I GTSAC 1 cut(s) 481
TspDTI ATGAA 4 cut(s) 236, 349, 602, 1122
TspGWI ACGGA 3 cut(s) 224, 861, 1303
TspRI CASTG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 881
VspI ATTAAT 1 cut(s) 516
XceI RCATGY 1 cut(s) 811
XmiI GTMKAC 2 cut(s) 804, 863
XspI CTAG 4 cut(s) 525, 620, 1313, 1374
ZrmI AGTACT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.