Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0015053

Physical Location & Seq

Genomic Coordinates Reverse (-)

844553 .. 846799

Gene Structure 2247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g01610.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGAACAAGCTAAGTAGCTCTTTCTTAAACCCCTTAAAACCCCAAACCCAGCTCACACCTACTGCCACCACCACCACCCGAGCTTTCAACGCCATCATCAACCGTCTCTCATCTCAACGCTCTCACCATGAAGTCCTTGCCGCATTCTCCTCTATGCTCAAAGCCCACATTCCTCCAGATACCCACACCTTCCCTAGTCTACTCAAAGCCTGCACCTCCCTAAACCTCTTTGGTCATGGCGTCTCACTACACCAACGCGTTGTGGTTAATGGGTTTTTCTCAGATGCTTATATTGCCTCTTCATTGATCAACCTCTATGCGAAACTTGGTCATGTCCAGAATGCACGGAAGGTGTTCGACACAATGCCTGAGAGAAAAAACGTTGTTCCTTGGACTTCCATTATCGGATGCTATTCGCGTGCCGGAAGTGTTGAGGTTGCGTTTGGTATGTTTAGTGAGATGCGGCATGACGGAATTCATCCCAGTTCGGTTACTCTGCTCAGCTTGCTGTCTGGAGCTTCGGAAGTTGCCCATGTGCAGTGTTTGCATGGTTGTGCTGTGGTGTATGGTTTTGAGTCTGATATGTGTTTGGTGAATTCCATGTTGAATGTGTATTGTAAATGCGGGAGAGTTGAAGATGGGAGGGATTTGTTTGAGTATATGAATGGAAGAGACACTGTTTCATGGAACTCGTTGATTTCAGGCTATGCGCAGAGTGGAGATGTTAGAGAAGTCTTTCAGCTTTTATATAAGATGAGGGTTGAAGGTGTGGTACCTGATAAGCAGACTTATGCGTCTGTGGCTGCAACACAGAGTGATGTTAGATTGGGGAAGTCTGTGCATGGACAGATTTTAAGATCAGGATTTGAAGTGGATTCCCATGTCGAAACAGCGGTTATAGTTATGTACTTGAAGTGCGGGAATGTTGATCTTGCGTTTCGGATATTTGAAAGGACAATGCATAAGGATGTGATTCTGTGGACGGCTATGATCTCAGGGCTTGCGCAGAATGATTCTGCAGACAGGGCCCTAATGGTTTTCTGTCAGATGTTGGAATCCAGAACAGAACCTTCTAGTGCCACCATAGCTAGTGCACTTGCAGCTTGTGCGCAACTGGGATCTTTTGAGCTAGGAACCTCTATTCACGGTTATGTGTTGAGGCAAGGAATGAGACTTGACATTCCTGCCCAAAACTCCCTTGTTACCATGTATGCAAAGTGTGCACGTTTGGATCAAAGTCGTGCTGCTTTCCAAAGTATGAGCAAAAGAGATTTGGTTTCTTGGAATGCTATAGTTGCTGGATATGCTCAAAATGGTCATCTGGGCGAGGCTCTGGTTCTTTTCTCTGAGATGAGGGCAACCCTGCAGAAGCCTGATTCATTAACTGTGGTCTCCCTTCTCCAAGCTTGTGCTTCCACTGGAGCGCTCCATCAAGGAAAGTGGATCCACAGCTTCATTATTAGAAGTTGTCTCAGACCATGCATCTTGGTAGACACAGCCCTGATTGACATGTACTCTAAATGCGGTGACATGGATAAAGCGCACAGGTGCTTTGTTGAAATGTCTGAACAGGATCTGGTGTCATGGAGCACCATTATTTCTGGTTATGGTTGTCATGGCAAAGCAGACACTGCTTTGGAGTTGTATGCAGAGCTTCTGCAGACTGGAATCAAACCAAATTATGTCATTTTCCTCTCAATTCTTTCAGCTTGTAGTCATAATGGTCTTGTTGAGAAGGGTTTGAGCATATACCAGTCGATGACTGAAGATTTTGGTATTGCACCAAGCCTTGAACATCGAGCTTGCATTGTTGATCTTCTCAGTCGAGCTGGAAAGGTGGAAGAGGCATATGATTTCTACAAGAGGGTGTTTCCAGAACCTGCTGTTGATGTTCTTGGTATACTTCTCGATGCCTGTCGAACCAAGGGCAATGTGGTTCTCGGGGACATTATCGCAGGAGAAATTTTTAGGCTAAAACCTGCGGATGCTGGAAACTACGTGCAATTGGCGCATACCTTTGCTTCGATGAACAGATGGGACGACGTTGGTGAAGCATGGAACCAAATGAAGGCTCTTGGCTTGAAAAAACTCCCTGGTTGGAGTTTTATCGAGTTACATGGGACTATCACTACATTCTTTACTGATCACAATTCAAATCCTCAAATTGATGATATAGTGTCACTATTGAAAATTTTAGGCAATGAAATGAGGAAATCAAGCCTCCGCAATTGGGACGGCGTTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1068 PPR PPR_2

Protein Analysis

749

Amino Acids

82.4

Weight (kDa)

6.58

Isoelectric Point (pI)

38.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	27 - 71	2.3e-06	PPR repeat family
PPR_2	PF13041	126 - 172	2.9e-09	PPR repeat family
PPR	PF01535	130 - 159	6.6e-06	PPR repeat
PPR_2	PF13041	224 - 265	1.4e-10	PPR repeat family
PPR	PF01535	227 - 257	2.7e-08	PPR repeat
PPR_2	PF13041	322 - 370	2.3e-06	PPR repeat family
PPR_2	PF13041	424 - 471	1.1e-09	PPR repeat family
PPR	PF01535	426 - 452	6.3e-06	PPR repeat
E_motif	PF20431	645 - 704	1.3e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04370
fragaria_vesca	FvH4_3g01610
malus_domestica	MD10G1325500.v1.1
prunus_persica	Prupe.4G016600_v2.0.a1
pyrus_communis	pycom10g27520
rosa_chinensis	RchiOBHm_Chr5g0002401
rosa_laevigata	RLG00000031029
rosa_multiflora	Rmu_co8285719.1_g000001 Rmu_sc0001717.1_g000003
rosa_roxburghii	Rroxscaffold_1G00073450
rosa_rugosa	Rorug04G0396000
rosa_samantha	Rh5AG018800 Rh5BG021600 Rh5CG020700 Rh5DG019800
rosa_wichuraiana	Rw5G001760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	793
Acc16I	TGCGCA	3 cut(s)	711, 1005, 1110
Acc36I	ACCTGC	2 cut(s)	1888, 1987
Acc65I	GGTACC	1 cut(s)	772
AccB1I	GGYRCC	1 cut(s)	772
AccI	GTMKAC	3 cut(s)	199, 1491, 1900
AccII	CGCG	2 cut(s)	258, 418
AciI	CCGC	8 cut(s)	141, 463, 624, 893, 918, 1524, 1982, 2224
AclI	AACGTT	1 cut(s)	381
AclWI	GGATC	5 cut(s)	1126, 1239, 1438, 1451, 1581
AcsI	RAATTY	4 cut(s)	474, 595, 1962, 2190
AcuI	CTGAAG	1 cut(s)	1785
AcyI	GRCGYC	1 cut(s)	240
AdeI	CACNNNGTG	1 cut(s)	815
AfaI	GTAC	3 cut(s)	774, 908, 1514
AfeI	AGCGCT	1 cut(s)	1425
AfiI	CCNNNNNNNGG	2 cut(s)	2068, 2230
AflIII	ACRYGT	2 cut(s)	256, 1509
AjnI	CCWGG	1 cut(s)	2092
Alw21I	GWGCWC	3 cut(s)	1096, 1225, 1592
Alw26I	GTCTC	6 cut(s)	110, 247, 666, 1165, 1396, 1475
Alw44I	GTGCAC	2 cut(s)	1092, 1221
AlwI	GGATC	5 cut(s)	1126, 1239, 1438, 1451, 1581
AlwNI	CAGNNNCTG	3 cut(s)	1576, 1631, 1880
Ama87I	CYCGRG	2 cut(s)	78, 1940
Aor51HI	AGCGCT	1 cut(s)	1425
AoxI	GGCC	1 cut(s)	1026
ApaI	GGGCCC	1 cut(s)	1030
ApaLI	GTGCAC	2 cut(s)	1092, 1221
ApeKI	GCWGC	3 cut(s)	803, 1100, 1244
ApoI	RAATTY	4 cut(s)	474, 595, 1962, 2190
Asp700I	GAANNNNTTC	2 cut(s)	353, 735
Asp718I	GGTACC	1 cut(s)	772
AspLEI	GCGC	6 cut(s)	712, 1006, 1111, 1426, 1543, 2011
AspS9I	GGNCC	2 cut(s)	1026, 1027
AsuHPI	GGTGA	4 cut(s)	116, 604, 1538, 2060
AvaI	CYCGRG	2 cut(s)	78, 1940
BaeGI	GKGCMC	3 cut(s)	1030, 1096, 1225
BamHI	GGATCC	1 cut(s)	1443
BanI	GGYRCC	1 cut(s)	772
BanII	GRGCYC	1 cut(s)	1030
BarI	GAAGNNNNNNTAC	2 cut(s)	756, 788
Bbv12I	GWGCWC	3 cut(s)	1096, 1225, 1592
BbvI	GCAGC	3 cut(s)	790, 1112, 1231
BccI	CCATC	4 cut(s)	101, 632, 1437, 2028
BceAI	ACGGC	1 cut(s)	999
BciT130I	CCWGG	1 cut(s)	2094
BclI	TGATCA	2 cut(s)	306, 2143
BcoDI	GTCTC	6 cut(s)	110, 247, 666, 1165, 1396, 1475
BfaI	CTAG	4 cut(s)	195, 1074, 1089, 1130
BfmI	CTRYAG	4 cut(s)	1017, 1290, 1364, 1658
BfoI	RGCGCY	1 cut(s)	1427
BfuAI	ACCTGC	2 cut(s)	1888, 1987
BisI	GCNGC	5 cut(s)	141, 464, 804, 1101, 1245
BlpI	GCTNAGC	1 cut(s)	500
BlsI	GCNGC	5 cut(s)	142, 465, 805, 1102, 1246
Bme1390I	CCNGG	1 cut(s)	2094
BmeT110I	CYCGRG	2 cut(s)	78, 1940
BmgT120I	GGNCC	2 cut(s)	1026, 1027
BmiI	GGNNCC	5 cut(s)	774, 1028, 1135, 1445, 2060
BmrFI	CCNGG	1 cut(s)	2094
BmrI	ACTGGG	2 cut(s)	477, 1124
BmsI	GCATC	6 cut(s)	274, 398, 450, 1491, 1900, 1975
BmuI	ACTGGG	2 cut(s)	477, 1124
BpmI	CTGGAG	3 cut(s)	159, 534, 1440
Bpu1102I	GCTNAGC	1 cut(s)	500
BsaAI	YACGTR	1 cut(s)	1999
BsaHI	GRCGYC	1 cut(s)	240
BsaI	GGTCTC	1 cut(s)	1396
BsaJI	CCNNGG	3 cut(s)	389, 1923, 2092
Bsc4I	CCNNNNNNNGG	2 cut(s)	2068, 2230
Bse1I	ACTGG	5 cut(s)	483, 1119, 1423, 1669, 1753
Bse3DI	GCAATG	2 cut(s)	1936, 2206
BseBI	CCWGG	1 cut(s)	2094
BseDI	CCNNGG	3 cut(s)	389, 1923, 2092
BseGI	GGATG	4 cut(s)	413, 478, 973, 1990
BseLI	CCNNNNNNNGG	2 cut(s)	2068, 2230
BseMI	GCAATG	2 cut(s)	1936, 2206
BseMII	CTCAG	7 cut(s)	294, 360, 514, 1008, 1338, 1486, 1834
BseNI	ACTGG	5 cut(s)	483, 1119, 1423, 1669, 1753
BseRI	GAGGAG	1 cut(s)	139
BseSI	GKGCMC	3 cut(s)	1030, 1096, 1225
BseXI	GCAGC	3 cut(s)	790, 1112, 1231
BseYI	CCCAGC	1 cut(s)	48
BsgI	GTGCAG	2 cut(s)	196, 557
Bsh1236I	CGCG	2 cut(s)	258, 418
BshFI	GGCC	1 cut(s)	1028
BshNI	GGYRCC	1 cut(s)	772
BsiHKAI	GWGCWC	3 cut(s)	1096, 1225, 1592
BsiHKCI	CYCGRG	2 cut(s)	78, 1940
BsiSI	CCGG	1 cut(s)	423
BslFI	GGGAC	3 cut(s)	1958, 2051, 2134
BslI	CCNNNNNNNGG	2 cut(s)	2068, 2230
BsmAI	GTCTC	6 cut(s)	110, 247, 666, 1165, 1396, 1475
BsmBI	CGTCTC	2 cut(s)	110, 247
BsmFI	GGGAC	3 cut(s)	1958, 2051, 2134
BsmI	GAATGC	3 cut(s)	143, 346, 1291
BsnI	GGCC	1 cut(s)	1028
Bso31I	GGTCTC	1 cut(s)	1396
BsoBI	CYCGRG	2 cut(s)	78, 1940
Bsp120I	GGGCCC	1 cut(s)	1026
Bsp1286I	GDGCHC	4 cut(s)	1030, 1096, 1225, 1592
Bsp1720I	GCTNAGC	1 cut(s)	500
BspACI	CCGC	8 cut(s)	141, 463, 624, 893, 918, 1524, 1982, 2224
BspANI	GGCC	1 cut(s)	1028
BspCNI	CTCAG	7 cut(s)	293, 361, 513, 1007, 1339, 1485, 1833
BspFNI	CGCG	2 cut(s)	258, 418
BspLI	GGNNCC	5 cut(s)	774, 1028, 1135, 1445, 2060
BspMAI	CTGCAG	3 cut(s)	1021, 1368, 1662
BspMI	ACCTGC	2 cut(s)	1888, 1987
BspPI	GGATC	5 cut(s)	1126, 1239, 1438, 1451, 1581
BspT107I	GGYRCC	1 cut(s)	772
BspTNI	GGTCTC	1 cut(s)	1396
BsrDI	GCAATG	2 cut(s)	1936, 2206
BsrI	ACTGG	5 cut(s)	483, 1119, 1423, 1669, 1753
BssECI	CCNNGG	3 cut(s)	389, 1923, 2092
BssNAI	GTATAC	1 cut(s)	1901
BssNI	GRCGYC	1 cut(s)	240
BssT1I	CCWWGG	2 cut(s)	389, 1923
Bst1107I	GTATAC	1 cut(s)	1901
Bst2UI	CCWGG	1 cut(s)	2094
Bst4CI	ACNGT	4 cut(s)	104, 679, 1148, 1387
Bst6I	CTCTTC	3 cut(s)	304, 664, 1836
BstACI	GRCGYC	1 cut(s)	240
BstAPI	GCANNNNNTGC	4 cut(s)	544, 1106, 1220, 1631
BstBAI	YACGTR	1 cut(s)	1999
BstC8I	GCNNGC	5 cut(s)	211, 420, 506, 1002, 1804
BstDEI	CTNAG	8 cut(s)	11, 280, 369, 500, 994, 1347, 1472, 1820
BstF5I	GGATG	4 cut(s)	413, 478, 973, 1990
BstFNI	CGCG	2 cut(s)	258, 418
BstH2I	RGCGCY	1 cut(s)	1427
BstHHI	GCGC	6 cut(s)	712, 1006, 1111, 1426, 1543, 2011
BstMAI	GTCTC	6 cut(s)	110, 247, 666, 1165, 1396, 1475
BstNI	CCWGG	1 cut(s)	2094
BstNSI	RCATGY	1 cut(s)	1513
BstSCI	CCNGG	1 cut(s)	2092
BstSFI	CTRYAG	4 cut(s)	1017, 1290, 1364, 1658
BstSLI	GKGCMC	3 cut(s)	1030, 1096, 1225
BstUI	CGCG	2 cut(s)	258, 418
BstV1I	GCAGC	3 cut(s)	790, 1112, 1231
BstX2I	RGATCY	3 cut(s)	1118, 1443, 1573
BstYI	RGATCY	3 cut(s)	1118, 1443, 1573
BstZ17I	GTATAC	1 cut(s)	1901
BsuRI	GGCC	1 cut(s)	1028
BtsCI	GGATG	4 cut(s)	413, 478, 973, 1990
BtsI	GCAGTG	2 cut(s)	545, 1629
BtsIMutI	CAGTG	4 cut(s)	545, 675, 1416, 1629
BveI	ACCTGC	2 cut(s)	1888, 1987
Cac8I	GCNNGC	5 cut(s)	211, 420, 506, 1002, 1804
CaiI	CAGNNNCTG	3 cut(s)	1576, 1631, 1880
CfoI	GCGC	6 cut(s)	712, 1006, 1111, 1426, 1543, 2011
Cfr13I	GGNCC	2 cut(s)	1026, 1027
CseI	GACGC	2 cut(s)	229, 783
Csp6I	GTAC	3 cut(s)	773, 907, 1513
CspCI	CAANNNNNGTGG	2 cut(s)	1421, 1456
CviQI	GTAC	3 cut(s)	773, 907, 1513
DdeI	CTNAG	8 cut(s)	11, 280, 369, 500, 994, 1347, 1472, 1820
DraIII	CACNNNGTG	1 cut(s)	815
DrdI	GACNNNNNNGTC	1 cut(s)	793
DseDI	GACNNNNNNGTC	1 cut(s)	793
Eam1104I	CTCTTC	3 cut(s)	304, 664, 1836
EarI	CTCTTC	3 cut(s)	304, 664, 1836
Eco130I	CCWWGG	2 cut(s)	389, 1923
Eco24I	GRGCYC	1 cut(s)	1030
Eco31I	GGTCTC	1 cut(s)	1396
Eco47III	AGCGCT	1 cut(s)	1425
Eco57I	CTGAAG	1 cut(s)	1785
Eco88I	CYCGRG	2 cut(s)	78, 1940
EcoO109I	RGGNCCY	2 cut(s)	1026, 1027
EcoRI	GAATTC	2 cut(s)	474, 595
EcoRII	CCWGG	1 cut(s)	2092
EcoT14I	CCWWGG	2 cut(s)	389, 1923
EcoT22I	ATGCAT	2 cut(s)	963, 1484
EcoT38I	GRGCYC	1 cut(s)	1030
ErhI	CCWWGG	2 cut(s)	389, 1923
Esp3I	CGTCTC	2 cut(s)	110, 247
FalI	AAGNNNNNCTT	1 cut(s)	36
FaqI	GGGAC	3 cut(s)	1958, 2051, 2134
FauI	CCCGC	2 cut(s)	617, 911
FauNDI	CATATG	1 cut(s)	1849
FbaI	TGATCA	2 cut(s)	306, 2143
FblI	GTMKAC	3 cut(s)	199, 1491, 1900
Fnu4HI	GCNGC	5 cut(s)	141, 464, 804, 1101, 1245
FokI	GGATG	4 cut(s)	420, 465, 980, 1997
FriOI	GRGCYC	1 cut(s)	1030
Fsp4HI	GCNGC	5 cut(s)	141, 464, 804, 1101, 1245
FspBI	CTAG	4 cut(s)	195, 1074, 1089, 1130
FspI	TGCGCA	3 cut(s)	711, 1005, 1110
GlaI	GCGC	6 cut(s)	711, 1005, 1110, 1425, 1542, 2010
GluI	GCNGC	5 cut(s)	141, 464, 804, 1101, 1245
GsaI	CCCAGC	1 cut(s)	52
GsuI	CTGGAG	3 cut(s)	159, 534, 1440
HaeII	RGCGCY	1 cut(s)	1427
HaeIII	GGCC	1 cut(s)	1028
HapII	CCGG	1 cut(s)	423
HgaI	GACGC	2 cut(s)	229, 783
HhaI	GCGC	6 cut(s)	712, 1006, 1111, 1426, 1543, 2011
Hin1I	GRCGYC	1 cut(s)	240
Hin6I	GCGC	6 cut(s)	710, 1004, 1109, 1424, 1541, 2009
HinP1I	GCGC	6 cut(s)	710, 1004, 1109, 1424, 1541, 2009
HindIII	AAGCTT	1 cut(s)	1404
HinfI	GANTC	7 cut(s)	575, 875, 973, 1013, 1055, 1376, 1668
HpaII	CCGG	1 cut(s)	423
HphI	GGTGA	4 cut(s)	116, 604, 1538, 2060
Hpy166II	GTNNAC	6 cut(s)	200, 981, 1094, 1223, 1492, 1901
Hpy188I	TCNGA	9 cut(s)	283, 407, 523, 580, 942, 1047, 1348, 1475, 1567
Hpy188III	TCNNGA	7 cut(s)	176, 337, 513, 861, 1059, 1874, 1907
Hpy8I	GTNNAC	6 cut(s)	200, 981, 1094, 1223, 1492, 1901
Hpy99I	CGWCG	1 cut(s)	2045
HpyAV	CCTTC	7 cut(s)	199, 343, 758, 1080, 1406, 1729, 2062
HpyCH4III	ACNGT	4 cut(s)	104, 679, 1148, 1387
HpyCH4IV	ACGT	4 cut(s)	381, 1225, 1998, 2043
HpyF3I	CTNAG	8 cut(s)	11, 280, 369, 500, 994, 1347, 1472, 1820
HpySE526I	ACGT	4 cut(s)	381, 1225, 1998, 2043
Hsp92I	GRCGYC	1 cut(s)	240
HspAI	GCGC	6 cut(s)	710, 1004, 1109, 1424, 1541, 2009
KpnI	GGTACC	1 cut(s)	776
Ksp22I	TGATCA	2 cut(s)	306, 2143
LmnI	GCTCC	4 cut(s)	515, 1421, 1431, 1587
Lsp1109I	GCAGC	3 cut(s)	790, 1112, 1231
LweI	GCATC	6 cut(s)	274, 398, 450, 1491, 1900, 1975
MaeI	CTAG	4 cut(s)	195, 1074, 1089, 1130
MaeII	ACGT	4 cut(s)	381, 1225, 1998, 2043
MaeIII	GTNAC	5 cut(s)	490, 1201, 1526, 2112, 2178
MboII	GAAGA	6 cut(s)	291, 647, 681, 1778, 1808, 1853
MfeI	CAATTG	2 cut(s)	2003, 2227
MflI	RGATCY	3 cut(s)	1118, 1443, 1573
MhlI	GDGCHC	4 cut(s)	1030, 1096, 1225, 1592
MluI	ACGCGT	1 cut(s)	256
MlyI	GAGTC	1 cut(s)	584
MmeI	TCCRAC	2 cut(s)	1032, 2078
Mph1103I	ATGCAT	2 cut(s)	963, 1484
MroXI	GAANNNNTTC	2 cut(s)	353, 735
MseI	TTAA	5 cut(s)	26, 35, 267, 854, 1382
MslI	CAYNNNNRTG	3 cut(s)	552, 966, 1149
MspA1I	CMGCKG	1 cut(s)	893
MspI	CCGG	1 cut(s)	423
MspR9I	CCNGG	1 cut(s)	2094
MunI	CAATTG	2 cut(s)	2003, 2227
Mva1269I	GAATGC	3 cut(s)	143, 346, 1291
MvaI	CCWGG	1 cut(s)	2094
MvnI	CGCG	2 cut(s)	258, 418
NdeI	CATATG	1 cut(s)	1849
NlaIV	GGNNCC	5 cut(s)	774, 1028, 1135, 1445, 2060
NmuCI	GTSAC	2 cut(s)	1526, 2178
NsbI	TGCGCA	3 cut(s)	711, 1005, 1110
NsiI	ATGCAT	2 cut(s)	963, 1484
NspI	RCATGY	1 cut(s)	1513
PciI	ACATGT	1 cut(s)	1509
PctI	GAATGC	3 cut(s)	143, 346, 1291
PdmI	GAANNNNTTC	2 cut(s)	353, 735
PfeI	GAWTC	6 cut(s)	875, 973, 1013, 1055, 1376, 1668
PkrI	GCNGC	5 cut(s)	142, 465, 805, 1102, 1246
PleI	GAGTC	1 cut(s)	583
PpsI	GAGTC	1 cut(s)	583
Ppu21I	YACGTR	1 cut(s)	1999
PscI	ACATGT	1 cut(s)	1509
Psp1406I	AACGTT	1 cut(s)	381
Psp6I	CCWGG	1 cut(s)	2092
PspFI	CCCAGC	1 cut(s)	48
PspGI	CCWGG	1 cut(s)	2092
PspN4I	GGNNCC	5 cut(s)	774, 1028, 1135, 1445, 2060
PspOMI	GGGCCC	1 cut(s)	1026
PspPI	GGNCC	2 cut(s)	1026, 1027
PstI	CTGCAG	3 cut(s)	1021, 1368, 1662
PstNI	CAGNNNCTG	3 cut(s)	1576, 1631, 1880
PsuI	RGATCY	3 cut(s)	1118, 1443, 1573
RsaI	GTAC	3 cut(s)	774, 908, 1514
RsaNI	GTAC	3 cut(s)	773, 907, 1513
RseI	CAYNNNNRTG	3 cut(s)	552, 966, 1149
SaqAI	TTAA	5 cut(s)	26, 35, 267, 854, 1382
SatI	GCNGC	5 cut(s)	141, 464, 804, 1101, 1245
Sau96I	GGNCC	2 cut(s)	1026, 1027
SchI	GAGTC	1 cut(s)	584
ScrFI	CCNGG	1 cut(s)	2094
SduI	GDGCHC	4 cut(s)	1030, 1096, 1225, 1592
SfaNI	GCATC	6 cut(s)	274, 398, 450, 1491, 1900, 1975
SfcI	CTRYAG	4 cut(s)	1017, 1290, 1364, 1658
SmiMI	CAYNNNNRTG	3 cut(s)	552, 966, 1149
SsiI	CCGC	8 cut(s)	141, 463, 624, 893, 918, 1524, 1982, 2224
SspMI	CTAG	4 cut(s)	195, 1074, 1089, 1130
StyD4I	CCNGG	1 cut(s)	2092
StyI	CCWWGG	2 cut(s)	389, 1923
TaaI	ACNGT	4 cut(s)	104, 679, 1148, 1387
TaiI	ACGT	4 cut(s)	384, 1228, 2001, 2046
TaqI	TCGA	9 cut(s)	357, 885, 1757, 1798, 1825, 1908, 1918, 2024, 2109
TatI	WGTACW	2 cut(s)	906, 1512
TauI	GCSGC	2 cut(s)	143, 466
TfiI	GAWTC	6 cut(s)	875, 973, 1013, 1055, 1376, 1668
Tru1I	TTAA	5 cut(s)	26, 35, 267, 854, 1382
Tru9I	TTAA	5 cut(s)	26, 35, 267, 854, 1382
TscAI	CASTG	4 cut(s)	545, 682, 1423, 1636
TseFI	GTSAC	2 cut(s)	1526, 2178
TseI	GCWGC	3 cut(s)	803, 1100, 1244
Tsp45I	GTSAC	2 cut(s)	1526, 2178
TspGWI	ACGGA	2 cut(s)	361, 486
TspRI	CASTG	4 cut(s)	545, 682, 1423, 1636
VneI	GTGCAC	2 cut(s)	1092, 1221
XapI	RAATTY	4 cut(s)	474, 595, 1962, 2190
XceI	RCATGY	1 cut(s)	1513
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1930
XmiI	GTMKAC	3 cut(s)	199, 1491, 1900
XmnI	GAANNNNTTC	2 cut(s)	353, 735
XspI	CTAG	4 cut(s)	195, 1074, 1089, 1130
Zsp2I	ATGCAT	2 cut(s)	963, 1484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.