Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0015053

Physical Location & Seq

Genomic Coordinates Reverse (-)

1472886 .. 1475450

Gene Structure 2565 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG019800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGAGTTATGAACAAGCTAAACAGCTCCTTCTTAAACCCCCTAAAACCCCAACCTCAGCCTACACCAACTGCCACCACCACCAGAGCTTTCAACGCTATCATCAACCGTCTCTCTTCTCAAGGTCTCACCATGAAGTCCTTGCCACATACTCCTCTATGCTCAAAACCCACATAGCTCCGGATACCCACACCTTCCCTAATCTGCTCAAAGCTTGCACCTCCCTGAACCTCTTTTGTTATGGTGTCTCGTGTCATCAATGCATTGTTGTTAACGGGTTTTCTTCGGATGCTTACATTGCCTCCTCATTGATCAACTTCTATGCGAAATTTGGTTATGCCCAAAATGCACGCAAGGTGTTCGATACAATGGCTGAAAGAAACGTTGTTCCTTGGACTTCCATTATCGGATGCTATTCGCGTGCCGCAAGTGTTGGAGTTGCGTTTGAGATGTTTGGTGATATGCGGCGTGAGGGAGTTCAACCCAGTTCGGTTACTCTGCTCAGCTTGCTCTCTGGAGCTCCGGAACTTGCCCATGTGCAGTGTTTGCATGGTTGTGCTGTGTTGTATGGTTTTGAGTCTGATATGTCTTTGATGAATTCCATGTTGAATGTGTATTGTAAATGTGGGAGAGTTGAAGATGCTAGGGACTTGTTTGAGTATTTGAATCGAAGAGACATTGTTTCGTGGAACTCATTGATTTCAGGCTATGCACAGAGTGGAAATATCAGAGAAGTATTCCAGCTTTTATTTAAGATGAGGGTTGAAGGTGTGGAACCTGATAAGCAGACATATGCGACTGCTGTGTCTGTGGCCGCAACACAGAGTAATCTTAAATTGGGAAAGTCTGTGCATGGACAGATTTTGAGAACAGGATTTGAATTGGATTCCCATGTCGAAACAGCGCTTATTGTTATGTACTTGAAGTGCAGGAATATTGATCTTGCATTTCGTGTATTTGAAAGGACAATGCAGAAGGATGTGGTTCTGTGGACGGCTATGATCTCAGGGCTTGCGCAAAATGATTCTGCAGACAGGGCTCTAATGGTTTTCTGTCAGATGTTGGAATCAAGAACAGAACCGTCTAGTTCTACCATAGCTAGTGCTCTTGCAGCTTGTGCGCAACTATGTTCTTTTGAGCTAGGAACCTCAATTCACGGTTATGTGTTGAGGCAAGGAATGAGACTTGACATTCCTGCCCAAAATTCCCTTGTCACCATGTATGCAAAGTGTGCACGTTTGGATCAAAGTCGCGCTGTTTTTGAAAATATGAGCAAAAGAGATTTGGTTTCTTGGAATGCTATAGTTGCTGGATATGCTCAAAATGGTCATATATGCGAGGCTCTGGTACTTTTCTCCGAGATGAGGGCAACTCTTCAGAAGCCTGATTCGTTAACTGTGGTCTCCCTTCTCCAAGCTTGTGCCTCCACTGGGGCTCTCCATCAAGGAAAGTGGATCCACAACTTCATTATTAGAAGTTGCCTCAGACCATGCATCTTGGTAGACACAGCTCTGGTCGACATGTACTCAAAATGCGGCGACATGGATATAGCTCACAAGTGCTTTGTTGAGATGTCTGACCGGGATCTGGTGTCATGGAGCACTATTATTTCTGGTTATGGTTGTCATGGCAAAGCAGAGACTGCTTTGGAGTTGTATGCAGAGCTTCTGCAGACTGGAATCAAACCAAATCATGTCATTTTCCTCTCAATTCTTTCAGCTTGTAGTCATAATGGTCTTGTCGACAAGGGTTTGAGCATATACCAGTCGATGACTGAAGATTTTGGTATTGCACCAAGCCTTGAACATCGAGCTTGCATTGTTGATCTCCTCAGTCGAGCTGGAAGGGTGGAAGAGGCATATGATTTCTACAAGAGGGTGTTTCCAGAGCCTGCAGTTGATGTCTTGGGCATACTTCTCGATGCCTGTCGAACCAAGGGCAATGAGGTTCTCGTGGACATTATCGCAGAAGAAATTTTGAGGCTGAGACCTGTGGATGCTGGAAACTATGTGCAATTGGCGCATACCTATGCTTCGATGAACAGATGGGATGGCGTTGGTGAAGCATGGAACCAAATGAAGTCTCTTGGCTTGAAAAAACTCCCTGGTTGGAGTTTTATCGAATTACATGGGACTATCACTACATTCTTCACAGATCACAATTCAAATCCTCAGATTGATGATATAGTGTCACTATTGAAAATTTTGAGCAAGGAAATGAGGAAATCAAGCCTCCGCAGTTGGGATGGCGTTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1068 PPR PPR_2

Protein Analysis

751

Amino Acids

83.65

Weight (kDa)

6.58

Isoelectric Point (pI)

43.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	126 - 172	6e-08	PPR repeat family
PPR_2	PF13041	224 - 266	6.9e-11	PPR repeat family
PPR	PF01535	227 - 257	6.4e-08	PPR repeat
PPR_2	PF13041	325 - 373	9.7e-07	PPR repeat family
PPR_2	PF13041	427 - 474	3.6e-09	PPR repeat family
PPR_2	PF13041	528 - 565	4.5e-06	PPR repeat family
E_motif	PF20431	655 - 707	1.5e-07	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04370
fragaria_vesca	FvH4_3g01610
malus_domestica	MD10G1325500.v1.1
prunus_persica	Prupe.4G016600_v2.0.a1
pyrus_communis	pycom10g27520
rosa_chinensis	RchiOBHm_Chr5g0002401
rosa_laevigata	RLG00000031029
rosa_multiflora	Rmu_co8285719.1_g000001 Rmu_sc0001717.1_g000003
rosa_roxburghii	Rroxscaffold_1G00073450
rosa_rugosa	Rorug04G0396000
rosa_samantha	Rh5AG018800 Rh5BG021600 Rh5CG020700 Rh5DG019800
rosa_wichuraiana	Rw5G001760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	802
Acc16I	TGCGCA	2 cut(s)	1014, 1119
AccI	GTMKAC	3 cut(s)	1500, 1515, 1740
AccII	CGCG	2 cut(s)	418, 1251
AccIII	TCCGGA	2 cut(s)	178, 520
AciI	CCGC	5 cut(s)	423, 463, 813, 1533, 2233
AclI	AACGTT	1 cut(s)	381
AclWI	GGATC	4 cut(s)	1248, 1447, 1460, 1590
AcoI	YGGCCR	1 cut(s)	810
AcsI	RAATTY	5 cut(s)	326, 595, 1201, 1971, 2199
AcuI	CTGAAG	2 cut(s)	1358, 1794
AdeI	CACNNNGTG	1 cut(s)	716
AfaI	GTAC	3 cut(s)	917, 1347, 1523
AfeI	AGCGCT	1 cut(s)	903
AfiI	CCNNNNNNNGG	4 cut(s)	1362, 1428, 1585, 2239
AflIII	ACRYGT	1 cut(s)	1518
AjnI	CCWGG	1 cut(s)	2101
Alw21I	GWGCWC	4 cut(s)	520, 1105, 1234, 1601
Alw26I	GTCTC	9 cut(s)	114, 129, 250, 666, 1174, 1405, 1631, 1978, 2085
Alw44I	GTGCAC	1 cut(s)	1230
AlwI	GGATC	4 cut(s)	1248, 1447, 1460, 1590
AlwNI	CAGNNNCTG	2 cut(s)	1640, 1889
Aor13HI	TCCGGA	2 cut(s)	178, 520
Aor51HI	AGCGCT	1 cut(s)	903
AoxI	GGCC	1 cut(s)	810
ApaLI	GTGCAC	1 cut(s)	1230
ApeKI	GCWGC	1 cut(s)	1109
ApoI	RAATTY	5 cut(s)	326, 595, 1201, 1971, 2199
AspLEI	GCGC	5 cut(s)	904, 1015, 1120, 1253, 2020
AsuC2I	CCSGG	1 cut(s)	1580
AsuHPI	GGTGA	4 cut(s)	119, 467, 1204, 2069
BaeGI	GKGCMC	1 cut(s)	1234
BamHI	GGATCC	1 cut(s)	1452
BanII	GRGCYC	3 cut(s)	520, 1039, 1435
BauI	CACGAG	2 cut(s)	247, 1949
Bbv12I	GWGCWC	4 cut(s)	520, 1105, 1234, 1601
BbvCI	CCTCAGC	1 cut(s)	55
BbvI	GCAGC	1 cut(s)	1121
BccI	CCATC	4 cut(s)	1446, 2037, 2042, 2237
BceAI	ACGGC	1 cut(s)	1008
BcgI	CGANNNNNNTGC	4 cut(s)	340, 374, 1897, 1931
BciT130I	CCWGG	1 cut(s)	2103
BciVI	GTATCC	1 cut(s)	175
BclI	TGATCA	1 cut(s)	309
BcnI	CCSGG	1 cut(s)	1580
BcoDI	GTCTC	9 cut(s)	114, 129, 250, 666, 1174, 1405, 1631, 1978, 2085
BfaI	CTAG	4 cut(s)	642, 1083, 1098, 1139
BfmI	CTRYAG	4 cut(s)	1026, 1299, 1667, 1890
BfoI	RGCGCY	1 cut(s)	905
BfuI	GTATCC	1 cut(s)	175
BisI	GCNGC	5 cut(s)	423, 464, 813, 1110, 1534
BlpI	GCTNAGC	1 cut(s)	500
BlsI	GCNGC	5 cut(s)	424, 465, 814, 1111, 1535
Bme1390I	CCNGG	2 cut(s)	1580, 2103
BmiI	GGNNCC	4 cut(s)	774, 1144, 1454, 2069
BmrFI	CCNGG	2 cut(s)	1580, 2103
BmrI	ACTGGG	2 cut(s)	477, 1437
BmsI	GCATC	6 cut(s)	277, 398, 628, 1500, 1909, 1984
BmuI	ACTGGG	2 cut(s)	477, 1437
BplI	GAGNNNNNCTC	2 cut(s)	1354, 1386
BpmI	CTGGAG	1 cut(s)	534
Bpu10I	CCTNAGC	1 cut(s)	55
Bpu1102I	GCTNAGC	1 cut(s)	500
BpuEI	CTTGAG	1 cut(s)	103
BpuMI	CCSGG	1 cut(s)	1580
BsaI	GGTCTC	3 cut(s)	129, 1405, 1978
BsaJI	CCNNGG	3 cut(s)	389, 1932, 2101
BsaWI	WCCGGW	2 cut(s)	178, 520
BsaXI	ACNNNNNCTCC	2 cut(s)	284, 314
Bsc4I	CCNNNNNNNGG	4 cut(s)	1362, 1428, 1585, 2239
Bse1I	ACTGG	4 cut(s)	483, 1432, 1678, 1762
Bse3DI	GCAATG	2 cut(s)	294, 1945
BseAI	TCCGGA	2 cut(s)	178, 520
BseBI	CCWGG	1 cut(s)	2103
BseDI	CCNNGG	3 cut(s)	389, 1932, 2101
BseGI	GGATG	6 cut(s)	292, 413, 982, 1999, 2053, 2248
BseLI	CCNNNNNNNGG	4 cut(s)	1362, 1428, 1585, 2239
BseMI	GCAATG	2 cut(s)	294, 1945
BseMII	CTCAG	7 cut(s)	69, 514, 1017, 1495, 1843, 1973, 2183
BseNI	ACTGG	4 cut(s)	483, 1432, 1678, 1762
BseRI	GAGGAG	3 cut(s)	142, 292, 1817
BseSI	GKGCMC	1 cut(s)	1234
BseXI	GCAGC	1 cut(s)	1121
BsgI	GTGCAG	2 cut(s)	557, 946
Bsh1236I	CGCG	2 cut(s)	418, 1251
BshFI	GGCC	1 cut(s)	812
BsiHKAI	GWGCWC	4 cut(s)	520, 1105, 1234, 1601
BsiSI	CCGG	3 cut(s)	179, 521, 1579
BslFI	GGGAC	2 cut(s)	659, 2143
BslI	CCNNNNNNNGG	4 cut(s)	1362, 1428, 1585, 2239
BsmAI	GTCTC	9 cut(s)	114, 129, 250, 666, 1174, 1405, 1631, 1978, 2085
BsmBI	CGTCTC	1 cut(s)	114
BsmFI	GGGAC	2 cut(s)	659, 2143
BsmI	GAATGC	1 cut(s)	1300
BsnI	GGCC	1 cut(s)	812
Bso31I	GGTCTC	3 cut(s)	129, 1405, 1978
Bsp1286I	GDGCHC	6 cut(s)	520, 1039, 1105, 1234, 1435, 1601
Bsp13I	TCCGGA	2 cut(s)	178, 520
Bsp143I	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
Bsp1720I	GCTNAGC	1 cut(s)	500
BspACI	CCGC	5 cut(s)	423, 463, 813, 1533, 2233
BspANI	GGCC	1 cut(s)	812
BspCNI	CTCAG	7 cut(s)	68, 513, 1016, 1494, 1842, 1974, 2182
BspEI	TCCGGA	2 cut(s)	178, 520
BspFNI	CGCG	2 cut(s)	418, 1251
BspLI	GGNNCC	4 cut(s)	774, 1144, 1454, 2069
BspMAI	CTGCAG	3 cut(s)	1030, 1671, 1894
BspPI	GGATC	4 cut(s)	1248, 1447, 1460, 1590
BspTNI	GGTCTC	3 cut(s)	129, 1405, 1978
BsrDI	GCAATG	2 cut(s)	294, 1945
BsrI	ACTGG	4 cut(s)	483, 1432, 1678, 1762
BssECI	CCNNGG	3 cut(s)	389, 1932, 2101
BssMI	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
BssSI	CACGAG	2 cut(s)	247, 1949
BssT1I	CCWWGG	2 cut(s)	389, 1932
Bst2BI	CACGAG	2 cut(s)	247, 1949
Bst2UI	CCWGG	1 cut(s)	2103
Bst4CI	ACNGT	4 cut(s)	108, 1080, 1157, 1396
Bst6I	CTCTTC	4 cut(s)	119, 664, 1377, 1845
BstAPI	GCANNNNNTGC	4 cut(s)	544, 1115, 1229, 1640
BstC8I	GCNNGC	7 cut(s)	214, 349, 420, 506, 1011, 1813, 1890
BstDEI	CTNAG	7 cut(s)	55, 500, 1003, 1481, 1829, 1982, 2169
BstF5I	GGATG	6 cut(s)	292, 413, 982, 1999, 2053, 2248
BstFNI	CGCG	2 cut(s)	418, 1251
BstH2I	RGCGCY	1 cut(s)	905
BstHHI	GCGC	5 cut(s)	904, 1015, 1120, 1253, 2020
BstKTI	GATC	8 cut(s)	312, 940, 1002, 1243, 1455, 1585, 1825, 2155
BstMAI	GTCTC	9 cut(s)	114, 129, 250, 666, 1174, 1405, 1631, 1978, 2085
BstMBI	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
BstNI	CCWGG	1 cut(s)	2103
BstNSI	RCATGY	1 cut(s)	1522
BstSCI	CCNGG	2 cut(s)	1578, 2101
BstSFI	CTRYAG	4 cut(s)	1026, 1299, 1667, 1890
BstSLI	GKGCMC	1 cut(s)	1234
BstUI	CGCG	2 cut(s)	418, 1251
BstV1I	GCAGC	1 cut(s)	1121
BstX2I	RGATCY	2 cut(s)	1452, 1582
BstYI	RGATCY	2 cut(s)	1452, 1582
BsuI	GTATCC	1 cut(s)	175
BsuRI	GGCC	1 cut(s)	812
BtsCI	GGATG	6 cut(s)	292, 413, 982, 1999, 2053, 2248
BtsI	GCAGTG	1 cut(s)	545
BtsIMutI	CAGTG	2 cut(s)	545, 1425
Cac8I	GCNNGC	7 cut(s)	214, 349, 420, 506, 1011, 1813, 1890
CaiI	CAGNNNCTG	2 cut(s)	1640, 1889
CfoI	GCGC	5 cut(s)	904, 1015, 1120, 1253, 2020
Csp6I	GTAC	3 cut(s)	916, 1346, 1522
CspCI	CAANNNNNGTGG	2 cut(s)	1430, 1465
CviQI	GTAC	3 cut(s)	916, 1346, 1522
DdeI	CTNAG	7 cut(s)	55, 500, 1003, 1481, 1829, 1982, 2169
DpnI	GATC	8 cut(s)	311, 939, 1001, 1242, 1454, 1584, 1824, 2154
DpnII	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
DraIII	CACNNNGTG	1 cut(s)	716
DrdI	GACNNNNNNGTC	1 cut(s)	802
DseDI	GACNNNNNNGTC	1 cut(s)	802
EaeI	YGGCCR	1 cut(s)	810
Eam1104I	CTCTTC	4 cut(s)	119, 664, 1377, 1845
EarI	CTCTTC	4 cut(s)	119, 664, 1377, 1845
Ecl136II	GAGCTC	1 cut(s)	518
Eco130I	CCWWGG	2 cut(s)	389, 1932
Eco24I	GRGCYC	3 cut(s)	520, 1039, 1435
Eco31I	GGTCTC	3 cut(s)	129, 1405, 1978
Eco47III	AGCGCT	1 cut(s)	903
Eco53kI	GAGCTC	1 cut(s)	518
Eco57I	CTGAAG	2 cut(s)	1358, 1794
EcoICRI	GAGCTC	1 cut(s)	518
EcoRI	GAATTC	1 cut(s)	595
EcoRII	CCWGG	1 cut(s)	2101
EcoT14I	CCWWGG	2 cut(s)	389, 1932
EcoT22I	ATGCAT	2 cut(s)	263, 1493
EcoT38I	GRGCYC	3 cut(s)	520, 1039, 1435
ErhI	CCWWGG	2 cut(s)	389, 1932
Esp3I	CGTCTC	1 cut(s)	114
FaqI	GGGAC	2 cut(s)	659, 2143
FauNDI	CATATG	2 cut(s)	790, 1858
FbaI	TGATCA	1 cut(s)	309
FblI	GTMKAC	3 cut(s)	1500, 1515, 1740
Fnu4HI	GCNGC	5 cut(s)	423, 464, 813, 1110, 1534
FokI	GGATG	5 cut(s)	299, 420, 989, 2006, 2060
FriOI	GRGCYC	3 cut(s)	520, 1039, 1435
Fsp4HI	GCNGC	5 cut(s)	423, 464, 813, 1110, 1534
FspBI	CTAG	4 cut(s)	642, 1083, 1098, 1139
FspI	TGCGCA	2 cut(s)	1014, 1119
GlaI	GCGC	5 cut(s)	903, 1014, 1119, 1252, 2019
GluI	GCNGC	5 cut(s)	423, 464, 813, 1110, 1534
GsuI	CTGGAG	1 cut(s)	534
HaeII	RGCGCY	1 cut(s)	905
HaeIII	GGCC	1 cut(s)	812
HapII	CCGG	3 cut(s)	179, 521, 1579
HhaI	GCGC	5 cut(s)	904, 1015, 1120, 1253, 2020
Hin6I	GCGC	5 cut(s)	902, 1013, 1118, 1251, 2018
HinP1I	GCGC	5 cut(s)	902, 1013, 1118, 1251, 2018
HincII	GTYRAC	4 cut(s)	271, 1392, 1516, 1741
HindII	GTYRAC	4 cut(s)	271, 1392, 1516, 1741
HindIII	AAGCTT	2 cut(s)	210, 1413
HinfI	GANTC	7 cut(s)	575, 664, 884, 1022, 1064, 1385, 1677
HpaI	GTTAAC	2 cut(s)	271, 1392
HpaII	CCGG	3 cut(s)	179, 521, 1579
HphI	GGTGA	4 cut(s)	119, 467, 1204, 2069
Hpy166II	GTNNAC	8 cut(s)	271, 990, 1232, 1392, 1501, 1516, 1741, 1954
Hpy188III	TCNNGA	6 cut(s)	179, 513, 521, 1068, 1883, 1916
Hpy8I	GTNNAC	8 cut(s)	271, 990, 1232, 1392, 1501, 1516, 1741, 1954
HpyAV	CCTTC	6 cut(s)	38, 202, 758, 967, 1415, 1836
HpyCH4III	ACNGT	4 cut(s)	108, 1080, 1157, 1396
HpyCH4IV	ACGT	2 cut(s)	381, 1234
HpyF3I	CTNAG	7 cut(s)	55, 500, 1003, 1481, 1829, 1982, 2169
HpySE526I	ACGT	2 cut(s)	381, 1234
HspAI	GCGC	5 cut(s)	902, 1013, 1118, 1251, 2018
Kpn2I	TCCGGA	2 cut(s)	178, 520
Ksp22I	TGATCA	1 cut(s)	309
KspAI	GTTAAC	2 cut(s)	271, 1392
Kzo9I	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
LmnI	GCTCC	5 cut(s)	30, 181, 515, 523, 1596
Lsp1109I	GCAGC	1 cut(s)	1121
LweI	GCATC	6 cut(s)	277, 398, 628, 1500, 1909, 1984
MaeI	CTAG	4 cut(s)	642, 1083, 1098, 1139
MaeII	ACGT	2 cut(s)	381, 1234
MaeIII	GTNAC	3 cut(s)	490, 1210, 2187
MalI	GATC	8 cut(s)	311, 939, 1001, 1242, 1454, 1584, 1824, 2154
MboI	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
MboII	GAAGA	9 cut(s)	106, 273, 647, 681, 1364, 1787, 1862, 1979, 2137
MfeI	CAATTG	1 cut(s)	2012
MflI	RGATCY	2 cut(s)	1452, 1582
MhlI	GDGCHC	6 cut(s)	520, 1039, 1105, 1234, 1435, 1601
MlyI	GAGTC	1 cut(s)	584
MmeI	TCCRAC	3 cut(s)	412, 1041, 2087
Mph1103I	ATGCAT	2 cut(s)	263, 1493
MroI	TCCGGA	2 cut(s)	178, 520
MseI	TTAA	5 cut(s)	33, 270, 750, 831, 1391
MslI	CAYNNNNRTG	3 cut(s)	552, 1158, 2025
MspI	CCGG	3 cut(s)	179, 521, 1579
MspR9I	CCNGG	2 cut(s)	1580, 2103
MunI	CAATTG	1 cut(s)	2012
Mva1269I	GAATGC	1 cut(s)	1300
MvaI	CCWGG	1 cut(s)	2103
MvnI	CGCG	2 cut(s)	418, 1251
NciI	CCSGG	1 cut(s)	1580
NdeI	CATATG	2 cut(s)	790, 1858
NdeII	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
NlaIV	GGNNCC	4 cut(s)	774, 1144, 1454, 2069
NmuCI	GTSAC	2 cut(s)	1210, 2187
NsbI	TGCGCA	2 cut(s)	1014, 1119
NsiI	ATGCAT	2 cut(s)	263, 1493
NspI	RCATGY	1 cut(s)	1522
PciI	ACATGT	1 cut(s)	1518
PctI	GAATGC	1 cut(s)	1300
PfeI	GAWTC	6 cut(s)	664, 884, 1022, 1064, 1385, 1677
PkrI	GCNGC	5 cut(s)	424, 465, 814, 1111, 1535
PleI	GAGTC	1 cut(s)	583
PpsI	GAGTC	1 cut(s)	583
PscI	ACATGT	1 cut(s)	1518
Psp124BI	GAGCTC	1 cut(s)	520
Psp1406I	AACGTT	1 cut(s)	381
Psp6I	CCWGG	1 cut(s)	2101
PspGI	CCWGG	1 cut(s)	2101
PspN4I	GGNNCC	4 cut(s)	774, 1144, 1454, 2069
PstI	CTGCAG	3 cut(s)	1030, 1671, 1894
PstNI	CAGNNNCTG	2 cut(s)	1640, 1889
PsuI	RGATCY	2 cut(s)	1452, 1582
RsaI	GTAC	3 cut(s)	917, 1347, 1523
RsaNI	GTAC	3 cut(s)	916, 1346, 1522
RseI	CAYNNNNRTG	3 cut(s)	552, 1158, 2025
SacI	GAGCTC	1 cut(s)	520
SalI	GTCGAC	2 cut(s)	1514, 1739
SaqAI	TTAA	5 cut(s)	33, 270, 750, 831, 1391
SatI	GCNGC	5 cut(s)	423, 464, 813, 1110, 1534
Sau3AI	GATC	8 cut(s)	309, 937, 999, 1240, 1452, 1582, 1822, 2152
SchI	GAGTC	1 cut(s)	584
ScrFI	CCNGG	2 cut(s)	1580, 2103
SduI	GDGCHC	6 cut(s)	520, 1039, 1105, 1234, 1435, 1601
SfaNI	GCATC	6 cut(s)	277, 398, 628, 1500, 1909, 1984
SfcI	CTRYAG	4 cut(s)	1026, 1299, 1667, 1890
SmiMI	CAYNNNNRTG	3 cut(s)	552, 1158, 2025
SmlI	CTYRAG	1 cut(s)	118
SmoI	CTYRAG	1 cut(s)	118
SsiI	CCGC	5 cut(s)	423, 463, 813, 1533, 2233
SspI	AATATT	1 cut(s)	934
SspMI	CTAG	4 cut(s)	642, 1083, 1098, 1139
SstI	GAGCTC	1 cut(s)	520
StyD4I	CCNGG	2 cut(s)	1578, 2101
StyI	CCWWGG	2 cut(s)	389, 1932
TaaI	ACNGT	4 cut(s)	108, 1080, 1157, 1396
TaiI	ACGT	2 cut(s)	384, 1237
TatI	WGTACW	2 cut(s)	915, 1521
TauI	GCSGC	4 cut(s)	425, 466, 815, 1536
TfiI	GAWTC	6 cut(s)	664, 884, 1022, 1064, 1385, 1677
Tru1I	TTAA	5 cut(s)	33, 270, 750, 831, 1391
Tru9I	TTAA	5 cut(s)	33, 270, 750, 831, 1391
TscAI	CASTG	2 cut(s)	545, 1432
TseFI	GTSAC	2 cut(s)	1210, 2187
TseI	GCWGC	1 cut(s)	1109
Tsp45I	GTSAC	2 cut(s)	1210, 2187
TspDTI	ATGAA	6 cut(s)	24, 147, 608, 1453, 2051, 2090
TspRI	CASTG	2 cut(s)	545, 1432
VneI	GTGCAC	1 cut(s)	1230
XapI	RAATTY	5 cut(s)	326, 595, 1201, 1971, 2199
XceI	RCATGY	1 cut(s)	1522
XmiI	GTMKAC	3 cut(s)	1500, 1515, 1740
XspI	CTAG	4 cut(s)	642, 1083, 1098, 1139
Zsp2I	ATGCAT	2 cut(s)	263, 1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.